Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0332780 | XP_004489029.1 | 82.838 | 437 | 71 | 2 | 1 | 435 | 1 | 435 | 0.0 | 755 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0332780 | sp|Q9ZVA5|EP1L4_ARATH | 47.454 | 432 | 209 | 8 | 15 | 434 | 9 | 434 | 6.18e-137 | 403 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011920 | Msa0332780 | -0.802720 | 4.906419e-49 | -8.615850e-47 |
Msa0033840 | Msa0332780 | -0.803478 | 3.419923e-49 | -8.615850e-47 |
Msa0044720 | Msa0332780 | 0.824414 | 8.175097e-54 | -8.615850e-47 |
Msa0052780 | Msa0332780 | 0.841037 | 6.058727e-58 | -8.615850e-47 |
Msa0067590 | Msa0332780 | -0.803953 | 2.725648e-49 | -8.615850e-47 |
Msa0081610 | Msa0332780 | -0.820948 | 5.237637e-53 | -8.615850e-47 |
Msa0097570 | Msa0332780 | 0.845353 | 4.281332e-59 | -8.615850e-47 |
Msa0138990 | Msa0332780 | -0.815483 | 9.034321e-52 | -8.615850e-47 |
Msa0145430 | Msa0332780 | 0.822422 | 2.389725e-53 | -8.615850e-47 |
Msa0173950 | Msa0332780 | -0.823610 | 1.262780e-53 | -8.615850e-47 |
Msa0214820 | Msa0332780 | 0.871152 | 8.497146e-67 | -8.615850e-47 |
Msa0223500 | Msa0332780 | -0.804393 | 2.206967e-49 | -8.615850e-47 |
Msa0254470 | Msa0332780 | 0.829636 | 4.607230e-55 | -8.615850e-47 |
Msa0264580 | Msa0332780 | -0.809479 | 1.854586e-50 | -8.615850e-47 |
Msa0293720 | Msa0332780 | 0.819767 | 9.768957e-53 | -8.615850e-47 |
Msa0294200 | Msa0332780 | 0.849579 | 2.952900e-60 | -8.615850e-47 |
Msa0332760 | Msa0332780 | 0.800015 | 1.757299e-48 | -8.615850e-47 |
Msa0332780 | Msa0339970 | -0.811852 | 5.689103e-51 | -8.615850e-47 |
Msa0332780 | Msa0389080 | -0.814269 | 1.678679e-51 | -8.615850e-47 |
Msa0332780 | Msa0560460 | 0.820552 | 6.459199e-53 | -8.615850e-47 |
Msa0332780 | Msa0611060 | 0.815683 | 8.152117e-52 | -8.615850e-47 |
Msa0332780 | Msa0614480 | 0.802311 | 5.956979e-49 | -8.615850e-47 |
Msa0332780 | Msa0626920 | 0.804501 | 2.095963e-49 | -8.615850e-47 |
Msa0332780 | Msa0639110 | 0.822348 | 2.485778e-53 | -8.615850e-47 |
Msa0332780 | Msa0737030 | 0.821048 | 4.966462e-53 | -8.615850e-47 |
Msa0332780 | Msa0744640 | 0.808205 | 3.473054e-50 | -8.615850e-47 |
Msa0332780 | Msa0841730 | 0.807856 | 4.119596e-50 | -8.615850e-47 |
Msa0332780 | Msa0856020 | 0.820774 | 5.743021e-53 | -8.615850e-47 |
Msa0332780 | Msa1038300 | 0.807423 | 5.090739e-50 | -8.615850e-47 |
Msa0332780 | Msa1173150 | 0.842911 | 1.936824e-58 | -8.615850e-47 |
Msa0332780 | Msa1202470 | 0.804348 | 2.255888e-49 | -8.615850e-47 |
Msa0332780 | Msa1249600 | 0.813484 | 2.501197e-51 | -8.615850e-47 |
Msa0332780 | Msa1273620 | -0.811950 | 5.416916e-51 | -8.615850e-47 |
Msa0332780 | Msa1290900 | 0.817723 | 2.843556e-52 | -8.615850e-47 |
Msa0332780 | Msa1443620 | 0.804696 | 1.908287e-49 | -8.615850e-47 |
Msa0332780 | Msa1449580 | 0.807864 | 4.104269e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0332780 | MtrunA17_Chr2g0315841 | 84.018 | 438 | 65 | 3 | 1 | 435 | 1 | 436 | 0.0 | 754 |
Msa0332780 | MtrunA17_Chr2g0315851 | 80.909 | 440 | 77 | 4 | 1 | 435 | 1 | 438 | 0.0 | 711 |
Msa0332780 | MtrunA17_Chr2g0315871 | 77.481 | 262 | 43 | 2 | 33 | 294 | 2 | 247 | 8.11e-145 | 414 |
Msa0332780 | MtrunA17_Chr2g0315861 | 69.412 | 170 | 48 | 2 | 217 | 384 | 2 | 169 | 5.63e-80 | 244 |
Msa0332780 | MtrunA17_Chr7g0257821 | 28.065 | 367 | 214 | 19 | 60 | 409 | 48 | 381 | 2.13e-21 | 97.1 |
Msa0332780 | MtrunA17_Chr1g0149381 | 25.840 | 387 | 233 | 16 | 63 | 432 | 65 | 414 | 3.51e-21 | 96.7 |
Msa0332780 | MtrunA17_Chr3g0106211 | 26.446 | 363 | 220 | 14 | 63 | 402 | 45 | 383 | 1.07e-19 | 92.0 |
Msa0332780 | MtrunA17_Chr1g0202331 | 24.286 | 420 | 254 | 20 | 60 | 432 | 44 | 446 | 1.52e-19 | 91.7 |
Msa0332780 | MtrunA17_Chr2g0323301 | 26.431 | 367 | 216 | 15 | 93 | 428 | 77 | 420 | 2.03e-19 | 91.3 |
Msa0332780 | MtrunA17_Chr3g0106121 | 26.404 | 356 | 230 | 12 | 63 | 403 | 42 | 380 | 2.72e-19 | 90.9 |
Msa0332780 | MtrunA17_Chr3g0106151 | 25.837 | 418 | 264 | 16 | 34 | 433 | 18 | 407 | 3.14e-19 | 90.5 |
Msa0332780 | MtrunA17_Chr3g0134321 | 41.667 | 144 | 79 | 4 | 60 | 201 | 42 | 182 | 6.22e-19 | 89.4 |
Msa0332780 | MtrunA17_Chr7g0237351 | 26.263 | 396 | 247 | 17 | 60 | 433 | 47 | 419 | 2.55e-18 | 87.8 |
Msa0332780 | MtrunA17_Chr4g0023071 | 26.168 | 428 | 234 | 20 | 51 | 432 | 38 | 429 | 3.30e-18 | 87.4 |
Msa0332780 | MtrunA17_Chr7g0236641 | 24.260 | 338 | 204 | 14 | 93 | 400 | 75 | 390 | 4.67e-18 | 87.0 |
Msa0332780 | MtrunA17_Chr4g0055021 | 22.485 | 338 | 210 | 13 | 93 | 400 | 75 | 390 | 6.37e-18 | 85.5 |
Msa0332780 | MtrunA17_Chr7g0237331 | 27.128 | 376 | 234 | 14 | 60 | 416 | 48 | 402 | 6.46e-18 | 86.7 |
Msa0332780 | MtrunA17_Chr2g0280691 | 25.556 | 360 | 223 | 14 | 63 | 400 | 48 | 384 | 1.07e-17 | 85.9 |
Msa0332780 | MtrunA17_Chr3g0137741 | 23.016 | 378 | 250 | 12 | 63 | 430 | 60 | 406 | 2.12e-17 | 84.7 |
Msa0332780 | MtrunA17_Chr3g0134291 | 25.474 | 369 | 213 | 16 | 60 | 397 | 45 | 382 | 2.13e-17 | 84.7 |
Msa0332780 | MtrunA17_Chr7g0244431 | 25.749 | 334 | 206 | 14 | 112 | 433 | 101 | 404 | 2.24e-17 | 84.0 |
Msa0332780 | MtrunA17_Chr8g0361281 | 25.867 | 375 | 223 | 13 | 57 | 400 | 38 | 388 | 2.25e-17 | 84.7 |
Msa0332780 | MtrunA17_Chr2g0280681 | 26.111 | 360 | 221 | 14 | 63 | 400 | 50 | 386 | 2.64e-17 | 84.7 |
Msa0332780 | MtrunA17_Chr0c04g0492001 | 25.474 | 369 | 213 | 16 | 60 | 397 | 45 | 382 | 3.02e-17 | 84.3 |
Msa0332780 | MtrunA17_Chr0c04g0492031 | 25.474 | 369 | 213 | 16 | 60 | 397 | 45 | 382 | 3.55e-17 | 84.3 |
Msa0332780 | MtrunA17_Chr3g0106131 | 25.191 | 393 | 254 | 13 | 63 | 435 | 42 | 414 | 4.20e-17 | 84.0 |
Msa0332780 | MtrunA17_Chr3g0106221 | 27.424 | 361 | 226 | 14 | 63 | 402 | 44 | 389 | 7.51e-17 | 83.2 |
Msa0332780 | MtrunA17_Chr7g0236231 | 24.934 | 381 | 233 | 18 | 52 | 405 | 47 | 401 | 1.66e-16 | 82.0 |
Msa0332780 | MtrunA17_Chr2g0280701 | 25.826 | 333 | 201 | 12 | 93 | 400 | 73 | 384 | 5.22e-16 | 80.5 |
Msa0332780 | MtrunA17_Chr3g0106191 | 26.593 | 361 | 208 | 16 | 96 | 433 | 2 | 328 | 1.01e-15 | 79.7 |
Msa0332780 | MtrunA17_Chr5g0428111 | 42.478 | 113 | 59 | 3 | 91 | 197 | 78 | 190 | 2.86e-15 | 78.2 |
Msa0332780 | MtrunA17_Chr3g0106141 | 26.479 | 355 | 229 | 12 | 63 | 402 | 42 | 379 | 3.82e-15 | 77.8 |
Msa0332780 | MtrunA17_Chr2g0280711 | 25.444 | 338 | 200 | 15 | 93 | 400 | 76 | 391 | 5.10e-15 | 77.4 |
Msa0332780 | MtrunA17_Chr5g0428101 | 24.927 | 341 | 210 | 11 | 91 | 406 | 77 | 396 | 5.49e-15 | 77.4 |
Msa0332780 | MtrunA17_Chr8g0340061 | 25.806 | 372 | 220 | 17 | 93 | 433 | 77 | 423 | 8.48e-15 | 76.3 |
Msa0332780 | MtrunA17_Chr3g0106201 | 25.815 | 399 | 241 | 18 | 63 | 433 | 42 | 413 | 1.51e-14 | 75.9 |
Msa0332780 | MtrunA17_Chr7g0236521 | 25.148 | 338 | 206 | 14 | 93 | 403 | 55 | 372 | 3.58e-14 | 73.9 |
Msa0332780 | MtrunA17_Chr8g0348661 | 24.688 | 401 | 253 | 18 | 60 | 433 | 31 | 409 | 3.67e-14 | 74.7 |
Msa0332780 | MtrunA17_Chr2g0318171 | 23.398 | 359 | 211 | 17 | 93 | 430 | 90 | 405 | 6.07e-14 | 73.9 |
Msa0332780 | MtrunA17_Chr2g0333091 | 37.168 | 113 | 66 | 2 | 60 | 172 | 55 | 162 | 7.98e-14 | 73.9 |
Msa0332780 | MtrunA17_Chr6g0467281 | 26.690 | 281 | 164 | 12 | 93 | 360 | 72 | 323 | 9.06e-14 | 73.6 |
Msa0332780 | MtrunA17_Chr6g0467301 | 26.515 | 264 | 142 | 10 | 93 | 339 | 77 | 305 | 2.74e-13 | 72.0 |
Msa0332780 | MtrunA17_Chr7g0236121 | 23.932 | 351 | 209 | 19 | 90 | 405 | 74 | 401 | 3.60e-13 | 71.6 |
Msa0332780 | MtrunA17_Chr7g0236201 | 23.932 | 351 | 209 | 19 | 90 | 405 | 74 | 401 | 3.78e-13 | 71.6 |
Msa0332780 | MtrunA17_Chr7g0236161 | 23.932 | 351 | 209 | 19 | 90 | 405 | 74 | 401 | 4.23e-13 | 71.2 |
Msa0332780 | MtrunA17_Chr8g0361301 | 24.242 | 363 | 226 | 15 | 63 | 400 | 47 | 385 | 4.31e-13 | 71.6 |
Msa0332780 | MtrunA17_Chr7g0265791 | 26.263 | 396 | 232 | 18 | 63 | 432 | 63 | 424 | 6.24e-13 | 70.5 |
Msa0332780 | MtrunA17_Chr3g0078551 | 25.000 | 476 | 268 | 22 | 1 | 432 | 5 | 435 | 6.45e-13 | 70.9 |
Msa0332780 | MtrunA17_Chr3g0078541 | 23.709 | 426 | 236 | 18 | 60 | 432 | 56 | 445 | 6.75e-13 | 70.9 |
Msa0332780 | MtrunA17_Chr2g0323241 | 47.561 | 82 | 35 | 4 | 93 | 169 | 81 | 159 | 1.27e-12 | 69.3 |
Msa0332780 | MtrunA17_Chr8g0361311 | 24.750 | 400 | 257 | 17 | 60 | 434 | 43 | 423 | 1.34e-12 | 69.3 |
Msa0332780 | MtrunA17_Chr8g0340091 | 23.352 | 364 | 214 | 12 | 93 | 433 | 130 | 451 | 1.41e-12 | 69.7 |
Msa0332780 | MtrunA17_Chr8g0361251 | 25.500 | 400 | 254 | 17 | 60 | 434 | 43 | 423 | 2.77e-12 | 68.9 |
Msa0332780 | MtrunA17_Chr4g0063691 | 22.951 | 427 | 289 | 18 | 1 | 402 | 1 | 412 | 2.78e-12 | 68.9 |
Msa0332780 | MtrunA17_Chr8g0361441 | 24.036 | 337 | 203 | 14 | 93 | 400 | 77 | 389 | 4.27e-12 | 68.2 |
Msa0332780 | MtrunA17_Chr3g0084451 | 25.826 | 333 | 196 | 16 | 93 | 400 | 79 | 385 | 4.58e-12 | 68.2 |
Msa0332780 | MtrunA17_Chr7g0236511 | 24.058 | 345 | 212 | 14 | 93 | 409 | 81 | 403 | 6.05e-12 | 67.8 |
Msa0332780 | MtrunA17_Chr4g0042381 | 24.933 | 373 | 207 | 16 | 63 | 400 | 46 | 380 | 7.75e-12 | 67.4 |
Msa0332780 | MtrunA17_Chr4g0042401 | 25.664 | 339 | 200 | 17 | 91 | 400 | 73 | 388 | 8.55e-12 | 67.4 |
Msa0332780 | MtrunA17_Chr7g0236551 | 24.625 | 333 | 209 | 14 | 93 | 403 | 75 | 387 | 9.76e-12 | 67.0 |
Msa0332780 | MtrunA17_Chr2g0318831 | 36.364 | 121 | 69 | 5 | 93 | 205 | 76 | 196 | 1.37e-11 | 66.6 |
Msa0332780 | MtrunA17_Chr4g0023221 | 23.832 | 428 | 226 | 19 | 46 | 414 | 53 | 439 | 1.62e-11 | 66.6 |
Msa0332780 | MtrunA17_Chr3g0084691 | 25.076 | 331 | 202 | 16 | 93 | 400 | 79 | 386 | 1.88e-11 | 66.2 |
Msa0332780 | MtrunA17_Chr3g0098791 | 33.333 | 153 | 86 | 8 | 93 | 233 | 81 | 229 | 2.29e-11 | 65.9 |
Msa0332780 | MtrunA17_Chr8g0361261 | 23.056 | 373 | 218 | 16 | 63 | 400 | 78 | 416 | 3.43e-11 | 65.5 |
Msa0332780 | MtrunA17_Chr4g0042421 | 26.113 | 337 | 199 | 16 | 93 | 400 | 73 | 388 | 4.10e-11 | 65.1 |
Msa0332780 | MtrunA17_Chr3g0084621 | 25.904 | 332 | 200 | 18 | 93 | 400 | 79 | 388 | 4.27e-11 | 65.1 |
Msa0332780 | MtrunA17_Chr5g0399561 | 24.103 | 390 | 229 | 15 | 63 | 410 | 47 | 411 | 4.45e-11 | 65.1 |
Msa0332780 | MtrunA17_Chr4g0042441 | 26.203 | 374 | 214 | 20 | 60 | 400 | 43 | 387 | 4.98e-11 | 65.1 |
Msa0332780 | MtrunA17_Chr8g0357761 | 32.461 | 191 | 109 | 9 | 69 | 246 | 68 | 251 | 5.87e-11 | 64.7 |
Msa0332780 | MtrunA17_Chr8g0338501 | 23.596 | 356 | 204 | 15 | 93 | 410 | 109 | 434 | 7.48e-11 | 64.3 |
Msa0332780 | MtrunA17_Chr2g0311541 | 23.467 | 375 | 244 | 15 | 63 | 410 | 41 | 399 | 8.58e-11 | 64.3 |
Msa0332780 | MtrunA17_Chr7g0237391 | 25.138 | 362 | 222 | 13 | 63 | 402 | 49 | 383 | 9.15e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0332780 | AT1G78860.1 | 47.454 | 432 | 209 | 8 | 15 | 434 | 9 | 434 | 6.28e-138 | 403 |
Msa0332780 | AT1G78850.1 | 46.050 | 443 | 221 | 7 | 1 | 434 | 1 | 434 | 2.91e-137 | 401 |
Msa0332780 | AT1G78830.1 | 43.202 | 456 | 219 | 11 | 10 | 431 | 5 | 454 | 2.43e-118 | 353 |
Msa0332780 | AT1G78820.1 | 41.304 | 460 | 230 | 11 | 6 | 431 | 1 | 454 | 9.96e-113 | 339 |
Msa0332780 | AT1G16905.1 | 42.143 | 420 | 209 | 7 | 28 | 434 | 24 | 422 | 8.74e-112 | 335 |
Msa0332780 | AT4G00340.1 | 26.954 | 371 | 231 | 14 | 54 | 407 | 31 | 378 | 5.39e-23 | 102 |
Msa0332780 | AT4G00340.2 | 26.954 | 371 | 231 | 14 | 54 | 407 | 31 | 378 | 5.39e-23 | 102 |
Msa0332780 | AT5G24080.2 | 25.000 | 400 | 238 | 17 | 60 | 415 | 49 | 430 | 5.14e-22 | 99.8 |
Msa0332780 | AT4G32300.1 | 24.725 | 364 | 234 | 12 | 60 | 411 | 52 | 387 | 2.30e-21 | 97.4 |
Msa0332780 | AT5G35370.1 | 24.033 | 362 | 228 | 15 | 93 | 432 | 86 | 422 | 3.59e-20 | 94.0 |
Msa0332780 | AT1G61380.1 | 26.844 | 339 | 197 | 15 | 93 | 402 | 70 | 386 | 9.79e-19 | 89.4 |
Msa0332780 | AT4G21390.2 | 25.680 | 331 | 208 | 12 | 93 | 400 | 79 | 394 | 4.85e-18 | 87.4 |
Msa0332780 | AT1G11330.3 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 5.06e-18 | 87.0 |
Msa0332780 | AT4G21390.1 | 25.680 | 331 | 208 | 12 | 93 | 400 | 79 | 394 | 5.12e-18 | 87.4 |
Msa0332780 | AT4G11900.10 | 24.795 | 488 | 241 | 25 | 14 | 432 | 16 | 446 | 6.06e-18 | 86.7 |
Msa0332780 | AT4G11900.5 | 24.795 | 488 | 241 | 25 | 14 | 432 | 16 | 446 | 6.06e-18 | 86.7 |
Msa0332780 | AT4G11900.7 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 6.73e-18 | 86.7 |
Msa0332780 | AT4G11900.6 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 6.87e-18 | 86.7 |
Msa0332780 | AT4G11900.4 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 6.87e-18 | 86.7 |
Msa0332780 | AT1G11330.2 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 6.91e-18 | 87.0 |
Msa0332780 | AT1G11330.1 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 7.42e-18 | 86.7 |
Msa0332780 | AT4G11900.2 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 8.02e-18 | 86.7 |
Msa0332780 | AT4G11900.3 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 8.02e-18 | 86.7 |
Msa0332780 | AT3G12000.1 | 26.486 | 370 | 224 | 16 | 63 | 405 | 56 | 404 | 8.18e-18 | 85.5 |
Msa0332780 | AT4G11900.1 | 24.694 | 490 | 243 | 25 | 14 | 434 | 16 | 448 | 9.67e-18 | 86.3 |
Msa0332780 | AT4G11900.8 | 26.382 | 398 | 207 | 21 | 93 | 434 | 12 | 379 | 3.22e-17 | 84.7 |
Msa0332780 | AT4G11900.9 | 26.382 | 398 | 207 | 21 | 93 | 434 | 12 | 379 | 4.83e-17 | 84.3 |
Msa0332780 | AT5G03700.1 | 23.940 | 401 | 235 | 17 | 55 | 432 | 56 | 409 | 5.76e-16 | 80.1 |
Msa0332780 | AT3G51710.1 | 22.319 | 345 | 218 | 10 | 102 | 434 | 103 | 409 | 1.28e-15 | 79.3 |
Msa0332780 | AT1G65790.3 | 26.796 | 362 | 214 | 17 | 63 | 400 | 51 | 385 | 3.52e-15 | 78.2 |
Msa0332780 | AT1G65790.2 | 26.796 | 362 | 214 | 17 | 63 | 400 | 51 | 385 | 3.52e-15 | 78.2 |
Msa0332780 | AT1G65790.1 | 27.108 | 332 | 195 | 15 | 92 | 400 | 78 | 385 | 3.83e-15 | 78.2 |
Msa0332780 | AT1G61610.2 | 26.455 | 378 | 214 | 20 | 60 | 400 | 48 | 398 | 3.98e-15 | 78.2 |
Msa0332780 | AT1G61610.1 | 26.455 | 378 | 214 | 20 | 60 | 400 | 48 | 398 | 4.61e-15 | 78.2 |
Msa0332780 | AT1G61370.1 | 24.490 | 343 | 201 | 12 | 93 | 402 | 74 | 391 | 6.58e-15 | 77.4 |
Msa0332780 | AT2G19130.1 | 22.604 | 407 | 264 | 18 | 51 | 430 | 34 | 416 | 7.93e-15 | 77.4 |
Msa0332780 | AT1G61360.1 | 25.664 | 339 | 201 | 14 | 93 | 402 | 69 | 385 | 1.05e-14 | 77.0 |
Msa0332780 | AT2G41890.1 | 27.215 | 316 | 194 | 12 | 103 | 405 | 91 | 383 | 2.22e-14 | 75.9 |
Msa0332780 | AT1G11300.1 | 22.714 | 339 | 206 | 12 | 93 | 399 | 77 | 391 | 1.93e-13 | 73.2 |
Msa0332780 | AT1G11300.2 | 22.714 | 339 | 206 | 12 | 93 | 399 | 77 | 391 | 1.95e-13 | 72.8 |
Msa0332780 | AT1G34300.1 | 25.260 | 289 | 174 | 12 | 60 | 342 | 46 | 298 | 1.70e-12 | 70.1 |
Msa0332780 | AT4G27290.1 | 23.023 | 430 | 247 | 18 | 9 | 400 | 4 | 387 | 5.47e-12 | 68.6 |
Msa0332780 | AT4G27290.2 | 23.023 | 430 | 247 | 18 | 9 | 400 | 4 | 387 | 5.97e-12 | 68.2 |
Msa0332780 | AT1G61360.2 | 24.923 | 325 | 194 | 13 | 106 | 402 | 2 | 304 | 6.64e-12 | 68.2 |
Msa0332780 | AT1G61360.3 | 24.923 | 325 | 194 | 13 | 106 | 402 | 2 | 304 | 6.64e-12 | 68.2 |
Msa0332780 | AT1G61360.4 | 24.923 | 325 | 194 | 13 | 106 | 402 | 2 | 304 | 6.64e-12 | 68.2 |
Msa0332780 | AT1G61420.1 | 25.513 | 341 | 193 | 17 | 93 | 402 | 73 | 383 | 7.88e-12 | 67.8 |
Msa0332780 | AT1G61420.2 | 25.513 | 341 | 193 | 17 | 93 | 402 | 73 | 383 | 8.32e-12 | 67.8 |
Msa0332780 | AT1G61420.4 | 25.513 | 341 | 193 | 17 | 93 | 402 | 73 | 383 | 8.32e-12 | 67.8 |
Msa0332780 | AT1G61480.1 | 24.629 | 337 | 201 | 16 | 93 | 402 | 73 | 383 | 9.58e-12 | 67.8 |
Msa0332780 | AT1G65800.2 | 36.000 | 150 | 84 | 6 | 63 | 203 | 51 | 197 | 1.83e-11 | 66.6 |
Msa0332780 | AT1G65800.1 | 36.000 | 150 | 84 | 6 | 63 | 203 | 51 | 197 | 2.56e-11 | 66.2 |
Msa0332780 | AT1G11280.5 | 24.036 | 337 | 208 | 14 | 93 | 402 | 77 | 392 | 4.56e-11 | 65.5 |
Msa0332780 | AT1G11280.2 | 24.036 | 337 | 208 | 14 | 93 | 402 | 77 | 392 | 5.87e-11 | 65.1 |
Msa0332780 | AT1G11280.1 | 24.036 | 337 | 208 | 14 | 93 | 402 | 87 | 402 | 6.56e-11 | 65.1 |
Msa0332780 | AT1G11280.3 | 24.036 | 337 | 208 | 14 | 93 | 402 | 77 | 392 | 6.60e-11 | 65.1 |
Msa0332780 | AT1G11280.4 | 24.036 | 337 | 208 | 14 | 93 | 402 | 87 | 402 | 6.93e-11 | 65.1 |
Msa0332780 | AT1G61400.1 | 24.702 | 336 | 202 | 15 | 93 | 402 | 83 | 393 | 9.07e-11 | 64.7 |
Msa0332780 | AT1G61400.2 | 24.702 | 336 | 202 | 15 | 93 | 402 | 83 | 393 | 9.19e-11 | 64.7 |
Find 74 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGTTGATCAATATTTAA+AGG | 0.203871 | 2_4:+50048369 | Msa0332780:CDS |
CCTATTGGAATTCATCTAAT+TGG | 0.210505 | 2_4:+50048521 | Msa0332780:CDS |
CCAGAGAGATGTGGAAAATT+TGG | 0.215504 | 2_4:+50048817 | Msa0332780:CDS |
GATCAATATTTAAAGGCTAA+TGG | 0.303903 | 2_4:+50048376 | Msa0332780:CDS |
ATACTAAAGGTAAATTTGTT+TGG | 0.328214 | 2_4:+50048317 | Msa0332780:CDS |
GTTAAAGTGCTATTATTTAC+CGG | 0.352398 | 2_4:-50048667 | None:intergenic |
CAAACAAATACTTCGAATAA+AGG | 0.354635 | 2_4:+50048247 | Msa0332780:CDS |
TAATATAAAGTCAACCCTTT+GGG | 0.365772 | 2_4:-50048469 | None:intergenic |
GGCTTATCTTATTACTTATT+AGG | 0.367191 | 2_4:-50049162 | None:intergenic |
CCAATTAGATGAATTCCAAT+AGG | 0.367562 | 2_4:-50048521 | None:intergenic |
GATGAATTCCAATAGGGAAT+TGG | 0.367962 | 2_4:-50048514 | None:intergenic |
GGACCATTCATAGTAGAATA+TGG | 0.369527 | 2_4:+50047992 | Msa0332780:CDS |
ATAAAGGTGTTGTTGCCTTT+AGG | 0.371600 | 2_4:+50048263 | Msa0332780:CDS |
CACCTAGGCCAATTCCCTAT+TGG | 0.373218 | 2_4:+50048506 | Msa0332780:CDS |
ATATCTGATCCATTTGAGAT+TGG | 0.374078 | 2_4:+50048589 | Msa0332780:CDS |
ATAGCACTTTAACATATCTA+AGG | 0.382513 | 2_4:+50048677 | Msa0332780:CDS |
TGTTGATGGACCTTATAGTT+TGG | 0.383460 | 2_4:+50048438 | Msa0332780:CDS |
AGAGCTAGAGTGAAGGCATT+TGG | 0.389629 | 2_4:-50048079 | None:intergenic |
TTAAATATTGATCAACCAAA+AGG | 0.390291 | 2_4:-50048366 | None:intergenic |
TCATCCTACAGATACCCTTT+TGG | 0.400336 | 2_4:+50048351 | Msa0332780:CDS |
GTAATATAAAGTCAACCCTT+TGG | 0.401606 | 2_4:-50048470 | None:intergenic |
GACCTTCAAAACTTGTTAGT+AGG | 0.402178 | 2_4:+50048398 | Msa0332780:CDS |
GCCTTTAGGTTACTCTCAAA+TGG | 0.414987 | 2_4:+50048277 | Msa0332780:CDS |
TTTGTCAACTCAGGTGAACT+TGG | 0.428871 | 2_4:+50047971 | Msa0332780:CDS |
TATCTAAGGCTAGGAATTGA+TGG | 0.429940 | 2_4:+50048691 | Msa0332780:CDS |
TTTCATTACTACAAAATTGA+AGG | 0.432875 | 2_4:+50048946 | Msa0332780:CDS |
ACCTGAGTTGACAAATTTGA+AGG | 0.439119 | 2_4:-50047963 | None:intergenic |
TTGATGTGCGTGATGGTGTT+TGG | 0.440720 | 2_4:+50048740 | Msa0332780:CDS |
AAGTGCAATCCAATCTCAAA+TGG | 0.453322 | 2_4:-50048598 | None:intergenic |
GCCAACACACTTACAATCCT+TGG | 0.454150 | 2_4:-50049040 | None:intergenic |
TGGAGAATGGAACATTTGCT+TGG | 0.471864 | 2_4:+50048875 | Msa0332780:CDS |
CCTCCATATTCTACTATGAA+TGG | 0.498115 | 2_4:-50047995 | None:intergenic |
GAACAATAATGTGAGAAAAG+AGG | 0.499200 | 2_4:-50047891 | None:intergenic |
CAATTAGATGAATTCCAATA+GGG | 0.502032 | 2_4:-50048520 | None:intergenic |
TTCACTCTAGCTCTTCGAAT+GGG | 0.502190 | 2_4:+50048088 | Msa0332780:CDS |
TTTCACAATGTTGCCTCTGG+TGG | 0.505022 | 2_4:+50048625 | Msa0332780:CDS |
TTCAATGCTCCATTCCAAGT+TGG | 0.505787 | 2_4:+50048040 | Msa0332780:CDS |
AACACCTTGAGTTATCTTTG+TGG | 0.506678 | 2_4:-50049071 | None:intergenic |
ACCATTTGAGAGTAACCTAA+AGG | 0.511899 | 2_4:-50048278 | None:intergenic |
TCGAATGGGACTTCAACGTT+CGG | 0.513870 | 2_4:+50048102 | Msa0332780:CDS |
TAAATATTGATCAACCAAAA+GGG | 0.517574 | 2_4:-50048365 | None:intergenic |
ACCTTCAAATTTGTCAACTC+AGG | 0.519002 | 2_4:+50047962 | Msa0332780:CDS |
TATTTGCTTCCCACACCCAC+CGG | 0.528405 | 2_4:-50048135 | None:intergenic |
ATGCTGATGGAAGAATTGTT+TGG | 0.528512 | 2_4:+50048224 | Msa0332780:CDS |
CTTGTGTTGGCTAATGCTGA+TGG | 0.532407 | 2_4:+50048211 | Msa0332780:CDS |
TATGAAAATATTTAGTGAGC+CGG | 0.539381 | 2_4:+50048648 | Msa0332780:CDS |
TACATGAGTAAATACACTAC+TGG | 0.539734 | 2_4:+50048979 | Msa0332780:CDS |
TTCCAATAGGGAATTGGCCT+AGG | 0.540750 | 2_4:-50048508 | None:intergenic |
GTTGGTTGTCCATTGGAGAA+TGG | 0.552362 | 2_4:+50048862 | Msa0332780:CDS |
TTGTAGAAACCAACTTGGAA+TGG | 0.552949 | 2_4:-50048049 | None:intergenic |
TGGGTGTGGGAAGCAAATAA+AGG | 0.558011 | 2_4:+50048139 | Msa0332780:CDS |
TCAATGTGTTGGTTGTCCAT+TGG | 0.564083 | 2_4:+50048855 | Msa0332780:CDS |
GATTGCATGAGAAATGAAAG+TGG | 0.566775 | 2_4:-50047924 | None:intergenic |
ACAAAGATAACTCAAGGTGT+TGG | 0.569098 | 2_4:+50049073 | Msa0332780:CDS |
TGGAAAATTTGGACTTTGTG+AGG | 0.578223 | 2_4:+50048828 | Msa0332780:CDS |
AAACACCATCACGCACATCA+AGG | 0.588769 | 2_4:-50048738 | None:intergenic |
ACTTTAACATATCTAAGGCT+AGG | 0.589291 | 2_4:+50048682 | Msa0332780:CDS |
TATTTCCTTGATGTGCGTGA+TGG | 0.592648 | 2_4:+50048733 | Msa0332780:CDS |
GTTACTCTCAAATGGTAACA+TGG | 0.602406 | 2_4:+50048285 | Msa0332780:CDS |
CTTAATAAAACCCACATGTG+TGG | 0.606669 | 2_4:-50049136 | None:intergenic |
GCAAATGTTCCATTCTCCAA+TGG | 0.608211 | 2_4:-50048871 | None:intergenic |
TGTGAGGATAGTCAATGTGT+TGG | 0.608846 | 2_4:+50048844 | Msa0332780:CDS |
CTTCACTCTAGCTCTTCGAA+TGG | 0.609842 | 2_4:+50048087 | Msa0332780:CDS |
AGTTCAAAATACCACACATG+TGG | 0.615945 | 2_4:+50049125 | Msa0332780:CDS |
TAGTGTTGTAGAAACCAACT+TGG | 0.616231 | 2_4:-50048054 | None:intergenic |
TGTTGATGGAAATCTTGTGT+TGG | 0.627952 | 2_4:+50048198 | Msa0332780:CDS |
TCTACCACAAAGATAACTCA+AGG | 0.628662 | 2_4:+50049067 | Msa0332780:CDS |
TCAACCAAAAGGGTATCTGT+AGG | 0.635839 | 2_4:-50048355 | None:intergenic |
ACCAAGGATTGTAAGTGTGT+TGG | 0.640719 | 2_4:+50049039 | Msa0332780:CDS |
TGTCAATTACCAGAGAGATG+TGG | 0.650824 | 2_4:+50048808 | Msa0332780:CDS |
TTGTGCAAATAAATGTACCA+AGG | 0.661724 | 2_4:+50049023 | Msa0332780:CDS |
GTTCAAAATACCACACATGT+GGG | 0.676015 | 2_4:+50049126 | Msa0332780:CDS |
CATTCGAAGAGCTAGAGTGA+AGG | 0.676387 | 2_4:-50048086 | None:intergenic |
CCATTCATAGTAGAATATGG+AGG | 0.699892 | 2_4:+50047995 | Msa0332780:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGGTTTTAATTGATACTAA+AGG | + | chr2_4:50048304-50048323 | Msa0332780:CDS | 20.0% |
!!! | ATACTAAAGGTAAATTTGTT+TGG | + | chr2_4:50048317-50048336 | Msa0332780:CDS | 20.0% |
!! | TAAATATTGATCAACCAAAA+GGG | - | chr2_4:50048368-50048387 | None:intergenic | 20.0% |
!! | TTAAATATTGATCAACCAAA+AGG | - | chr2_4:50048369-50048388 | None:intergenic | 20.0% |
!! | TTTGGTTGATCAATATTTAA+AGG | + | chr2_4:50048369-50048388 | Msa0332780:CDS | 20.0% |
!! | TTTCATTACTACAAAATTGA+AGG | + | chr2_4:50048946-50048965 | Msa0332780:CDS | 20.0% |
!!! | ATGGTTTTAATTGATACTAA+AGG | + | chr2_4:50048304-50048323 | Msa0332780:CDS | 20.0% |
!!! | ATACTAAAGGTAAATTTGTT+TGG | + | chr2_4:50048317-50048336 | Msa0332780:CDS | 20.0% |
!! | TAAATATTGATCAACCAAAA+GGG | - | chr2_4:50048368-50048387 | None:intergenic | 20.0% |
!! | TTAAATATTGATCAACCAAA+AGG | - | chr2_4:50048369-50048388 | None:intergenic | 20.0% |
!! | TTTGGTTGATCAATATTTAA+AGG | + | chr2_4:50048369-50048388 | Msa0332780:CDS | 20.0% |
!! | TTTCATTACTACAAAATTGA+AGG | + | chr2_4:50048946-50048965 | Msa0332780:CDS | 20.0% |
!! | AATTTGAAGGTTTCATTTTG+TGG | - | chr2_4:50047953-50047972 | None:intergenic | 25.0% |
!!! | GAAAATGCAACTTTTTCATT+AGG | + | chr2_4:50048175-50048194 | Msa0332780:CDS | 25.0% |
! | CAAACAAATACTTCGAATAA+AGG | + | chr2_4:50048247-50048266 | Msa0332780:CDS | 25.0% |
! | GATCAATATTTAAAGGCTAA+TGG | + | chr2_4:50048376-50048395 | Msa0332780:CDS | 25.0% |
! | TCAGAAAAAGAAAATGTTGA+TGG | + | chr2_4:50048424-50048443 | Msa0332780:CDS | 25.0% |
! | TAATATAAAGTCAACCCTTT+GGG | - | chr2_4:50048472-50048491 | None:intergenic | 25.0% |
! | ACAAAAGTAAAAATTCACCT+AGG | + | chr2_4:50048491-50048510 | Msa0332780:CDS | 25.0% |
! | CAATTAGATGAATTCCAATA+GGG | - | chr2_4:50048523-50048542 | None:intergenic | 25.0% |
! | TATGAAAATATTTAGTGAGC+CGG | + | chr2_4:50048648-50048667 | Msa0332780:CDS | 25.0% |
!! | GTTAAAGTGCTATTATTTAC+CGG | - | chr2_4:50048670-50048689 | None:intergenic | 25.0% |
! | ATAGCACTTTAACATATCTA+AGG | + | chr2_4:50048677-50048696 | Msa0332780:CDS | 25.0% |
!! | AATTTGAAGGTTTCATTTTG+TGG | - | chr2_4:50047953-50047972 | None:intergenic | 25.0% |
!!! | GAAAATGCAACTTTTTCATT+AGG | + | chr2_4:50048175-50048194 | Msa0332780:CDS | 25.0% |
! | CAAACAAATACTTCGAATAA+AGG | + | chr2_4:50048247-50048266 | Msa0332780:CDS | 25.0% |
! | GATCAATATTTAAAGGCTAA+TGG | + | chr2_4:50048376-50048395 | Msa0332780:CDS | 25.0% |
! | TCAGAAAAAGAAAATGTTGA+TGG | + | chr2_4:50048424-50048443 | Msa0332780:CDS | 25.0% |
! | TAATATAAAGTCAACCCTTT+GGG | - | chr2_4:50048472-50048491 | None:intergenic | 25.0% |
! | ACAAAAGTAAAAATTCACCT+AGG | + | chr2_4:50048491-50048510 | Msa0332780:CDS | 25.0% |
! | CAATTAGATGAATTCCAATA+GGG | - | chr2_4:50048523-50048542 | None:intergenic | 25.0% |
! | TATGAAAATATTTAGTGAGC+CGG | + | chr2_4:50048648-50048667 | Msa0332780:CDS | 25.0% |
!! | GTTAAAGTGCTATTATTTAC+CGG | - | chr2_4:50048670-50048689 | None:intergenic | 25.0% |
! | ATAGCACTTTAACATATCTA+AGG | + | chr2_4:50048677-50048696 | Msa0332780:CDS | 25.0% |
! | ATGTGAGAAAAGAGGTTTTT+AGG | - | chr2_4:50047886-50047905 | None:intergenic | 30.0% |
GAACAATAATGTGAGAAAAG+AGG | - | chr2_4:50047894-50047913 | None:intergenic | 30.0% | |
! | AAAGTTGCATTTTCATCAAC+TGG | - | chr2_4:50048169-50048188 | None:intergenic | 30.0% |
!!! | ACTTTTTCATTAGGTGTTGA+TGG | + | chr2_4:50048184-50048203 | Msa0332780:CDS | 30.0% |
GGATCAAAAACCAAACTATA+AGG | - | chr2_4:50048451-50048470 | None:intergenic | 30.0% | |
GTAATATAAAGTCAACCCTT+TGG | - | chr2_4:50048473-50048492 | None:intergenic | 30.0% | |
CCAATTAGATGAATTCCAAT+AGG | - | chr2_4:50048524-50048543 | None:intergenic | 30.0% | |
CCTATTGGAATTCATCTAAT+TGG | + | chr2_4:50048521-50048540 | Msa0332780:CDS | 30.0% | |
! | ATATCTGATCCATTTGAGAT+TGG | + | chr2_4:50048589-50048608 | Msa0332780:CDS | 30.0% |
! | AAATATTTTCATACCACCAG+AGG | - | chr2_4:50048641-50048660 | None:intergenic | 30.0% |
! | ACTTTAACATATCTAAGGCT+AGG | + | chr2_4:50048682-50048701 | Msa0332780:CDS | 30.0% |
! | AAGTGTAATGCTAAGCTTTT+AGG | + | chr2_4:50048904-50048923 | Msa0332780:CDS | 30.0% |
TACATGAGTAAATACACTAC+TGG | + | chr2_4:50048979-50048998 | Msa0332780:CDS | 30.0% | |
TTGTGCAAATAAATGTACCA+AGG | + | chr2_4:50049023-50049042 | Msa0332780:CDS | 30.0% | |
! | ATGTGAGAAAAGAGGTTTTT+AGG | - | chr2_4:50047886-50047905 | None:intergenic | 30.0% |
GAACAATAATGTGAGAAAAG+AGG | - | chr2_4:50047894-50047913 | None:intergenic | 30.0% | |
! | AAAGTTGCATTTTCATCAAC+TGG | - | chr2_4:50048169-50048188 | None:intergenic | 30.0% |
!!! | ACTTTTTCATTAGGTGTTGA+TGG | + | chr2_4:50048184-50048203 | Msa0332780:CDS | 30.0% |
GGATCAAAAACCAAACTATA+AGG | - | chr2_4:50048451-50048470 | None:intergenic | 30.0% | |
GTAATATAAAGTCAACCCTT+TGG | - | chr2_4:50048473-50048492 | None:intergenic | 30.0% | |
CCAATTAGATGAATTCCAAT+AGG | - | chr2_4:50048524-50048543 | None:intergenic | 30.0% | |
CCTATTGGAATTCATCTAAT+TGG | + | chr2_4:50048521-50048540 | Msa0332780:CDS | 30.0% | |
! | ATATCTGATCCATTTGAGAT+TGG | + | chr2_4:50048589-50048608 | Msa0332780:CDS | 30.0% |
! | AAATATTTTCATACCACCAG+AGG | - | chr2_4:50048641-50048660 | None:intergenic | 30.0% |
! | ACTTTAACATATCTAAGGCT+AGG | + | chr2_4:50048682-50048701 | Msa0332780:CDS | 30.0% |
! | AAGTGTAATGCTAAGCTTTT+AGG | + | chr2_4:50048904-50048923 | Msa0332780:CDS | 30.0% |
TACATGAGTAAATACACTAC+TGG | + | chr2_4:50048979-50048998 | Msa0332780:CDS | 30.0% | |
TTGTGCAAATAAATGTACCA+AGG | + | chr2_4:50049023-50049042 | Msa0332780:CDS | 30.0% | |
GATTGCATGAGAAATGAAAG+TGG | - | chr2_4:50047927-50047946 | None:intergenic | 35.0% | |
ACCTTCAAATTTGTCAACTC+AGG | + | chr2_4:50047962-50047981 | Msa0332780:CDS | 35.0% | |
! | ACCTGAGTTGACAAATTTGA+AGG | - | chr2_4:50047966-50047985 | None:intergenic | 35.0% |
GGACCATTCATAGTAGAATA+TGG | + | chr2_4:50047992-50048011 | Msa0332780:CDS | 35.0% | |
CCTCCATATTCTACTATGAA+TGG | - | chr2_4:50047998-50048017 | None:intergenic | 35.0% | |
CCATTCATAGTAGAATATGG+AGG | + | chr2_4:50047995-50048014 | Msa0332780:CDS | 35.0% | |
TTGTAGAAACCAACTTGGAA+TGG | - | chr2_4:50048052-50048071 | None:intergenic | 35.0% | |
TAGTGTTGTAGAAACCAACT+TGG | - | chr2_4:50048057-50048076 | None:intergenic | 35.0% | |
! | TGTTGATGGAAATCTTGTGT+TGG | + | chr2_4:50048198-50048217 | Msa0332780:CDS | 35.0% |
ATGCTGATGGAAGAATTGTT+TGG | + | chr2_4:50048224-50048243 | Msa0332780:CDS | 35.0% | |
!! | ATAAAGGTGTTGTTGCCTTT+AGG | + | chr2_4:50048263-50048282 | Msa0332780:CDS | 35.0% |
ACCATTTGAGAGTAACCTAA+AGG | - | chr2_4:50048281-50048300 | None:intergenic | 35.0% | |
GTTACTCTCAAATGGTAACA+TGG | + | chr2_4:50048285-50048304 | Msa0332780:CDS | 35.0% | |
!! | GACCTTCAAAACTTGTTAGT+AGG | + | chr2_4:50048398-50048417 | Msa0332780:CDS | 35.0% |
!! | AGCCTACTAACAAGTTTTGA+AGG | - | chr2_4:50048403-50048422 | None:intergenic | 35.0% |
! | TGTTGATGGACCTTATAGTT+TGG | + | chr2_4:50048438-50048457 | Msa0332780:CDS | 35.0% |
!!! | AGTTTGGTTTTTGATCCCAA+AGG | + | chr2_4:50048454-50048473 | Msa0332780:CDS | 35.0% |
!!! | GTTTGGTTTTTGATCCCAAA+GGG | + | chr2_4:50048455-50048474 | Msa0332780:CDS | 35.0% |
GATGAATTCCAATAGGGAAT+TGG | - | chr2_4:50048517-50048536 | None:intergenic | 35.0% | |
AAGTGCAATCCAATCTCAAA+TGG | - | chr2_4:50048601-50048620 | None:intergenic | 35.0% | |
!!! | TTTTTTCACAATGTTGCCTC+TGG | + | chr2_4:50048622-50048641 | Msa0332780:CDS | 35.0% |
! | TATCTAAGGCTAGGAATTGA+TGG | + | chr2_4:50048691-50048710 | Msa0332780:CDS | 35.0% |
TGGAAAATTTGGACTTTGTG+AGG | + | chr2_4:50048828-50048847 | Msa0332780:CDS | 35.0% | |
TCTACCACAAAGATAACTCA+AGG | + | chr2_4:50049067-50049086 | Msa0332780:CDS | 35.0% | |
AACACCTTGAGTTATCTTTG+TGG | - | chr2_4:50049074-50049093 | None:intergenic | 35.0% | |
ACAAAGATAACTCAAGGTGT+TGG | + | chr2_4:50049073-50049092 | Msa0332780:CDS | 35.0% | |
AGTTCAAAATACCACACATG+TGG | + | chr2_4:50049125-50049144 | Msa0332780:CDS | 35.0% | |
GTTCAAAATACCACACATGT+GGG | + | chr2_4:50049126-50049145 | Msa0332780:CDS | 35.0% | |
CTTAATAAAACCCACATGTG+TGG | - | chr2_4:50049139-50049158 | None:intergenic | 35.0% | |
!!! | CACACATGTGGGTTTTATTA+AGG | + | chr2_4:50049137-50049156 | Msa0332780:CDS | 35.0% |
GATTGCATGAGAAATGAAAG+TGG | - | chr2_4:50047927-50047946 | None:intergenic | 35.0% | |
ACCTTCAAATTTGTCAACTC+AGG | + | chr2_4:50047962-50047981 | Msa0332780:CDS | 35.0% | |
! | ACCTGAGTTGACAAATTTGA+AGG | - | chr2_4:50047966-50047985 | None:intergenic | 35.0% |
GGACCATTCATAGTAGAATA+TGG | + | chr2_4:50047992-50048011 | Msa0332780:CDS | 35.0% | |
CCTCCATATTCTACTATGAA+TGG | - | chr2_4:50047998-50048017 | None:intergenic | 35.0% | |
CCATTCATAGTAGAATATGG+AGG | + | chr2_4:50047995-50048014 | Msa0332780:CDS | 35.0% | |
TTGTAGAAACCAACTTGGAA+TGG | - | chr2_4:50048052-50048071 | None:intergenic | 35.0% | |
TAGTGTTGTAGAAACCAACT+TGG | - | chr2_4:50048057-50048076 | None:intergenic | 35.0% | |
! | TGTTGATGGAAATCTTGTGT+TGG | + | chr2_4:50048198-50048217 | Msa0332780:CDS | 35.0% |
ATGCTGATGGAAGAATTGTT+TGG | + | chr2_4:50048224-50048243 | Msa0332780:CDS | 35.0% | |
!! | ATAAAGGTGTTGTTGCCTTT+AGG | + | chr2_4:50048263-50048282 | Msa0332780:CDS | 35.0% |
ACCATTTGAGAGTAACCTAA+AGG | - | chr2_4:50048281-50048300 | None:intergenic | 35.0% | |
GTTACTCTCAAATGGTAACA+TGG | + | chr2_4:50048285-50048304 | Msa0332780:CDS | 35.0% | |
!! | GACCTTCAAAACTTGTTAGT+AGG | + | chr2_4:50048398-50048417 | Msa0332780:CDS | 35.0% |
!! | AGCCTACTAACAAGTTTTGA+AGG | - | chr2_4:50048403-50048422 | None:intergenic | 35.0% |
! | TGTTGATGGACCTTATAGTT+TGG | + | chr2_4:50048438-50048457 | Msa0332780:CDS | 35.0% |
!!! | AGTTTGGTTTTTGATCCCAA+AGG | + | chr2_4:50048454-50048473 | Msa0332780:CDS | 35.0% |
!!! | GTTTGGTTTTTGATCCCAAA+GGG | + | chr2_4:50048455-50048474 | Msa0332780:CDS | 35.0% |
GATGAATTCCAATAGGGAAT+TGG | - | chr2_4:50048517-50048536 | None:intergenic | 35.0% | |
AAGTGCAATCCAATCTCAAA+TGG | - | chr2_4:50048601-50048620 | None:intergenic | 35.0% | |
!!! | TTTTTTCACAATGTTGCCTC+TGG | + | chr2_4:50048622-50048641 | Msa0332780:CDS | 35.0% |
! | TATCTAAGGCTAGGAATTGA+TGG | + | chr2_4:50048691-50048710 | Msa0332780:CDS | 35.0% |
TGGAAAATTTGGACTTTGTG+AGG | + | chr2_4:50048828-50048847 | Msa0332780:CDS | 35.0% | |
TCTACCACAAAGATAACTCA+AGG | + | chr2_4:50049067-50049086 | Msa0332780:CDS | 35.0% | |
AACACCTTGAGTTATCTTTG+TGG | - | chr2_4:50049074-50049093 | None:intergenic | 35.0% | |
ACAAAGATAACTCAAGGTGT+TGG | + | chr2_4:50049073-50049092 | Msa0332780:CDS | 35.0% | |
AGTTCAAAATACCACACATG+TGG | + | chr2_4:50049125-50049144 | Msa0332780:CDS | 35.0% | |
GTTCAAAATACCACACATGT+GGG | + | chr2_4:50049126-50049145 | Msa0332780:CDS | 35.0% | |
CTTAATAAAACCCACATGTG+TGG | - | chr2_4:50049139-50049158 | None:intergenic | 35.0% | |
!!! | CACACATGTGGGTTTTATTA+AGG | + | chr2_4:50049137-50049156 | Msa0332780:CDS | 35.0% |
TTTGTCAACTCAGGTGAACT+TGG | + | chr2_4:50047971-50047990 | Msa0332780:CDS | 40.0% | |
TTCAATGCTCCATTCCAAGT+TGG | + | chr2_4:50048040-50048059 | Msa0332780:CDS | 40.0% | |
!! | TTCACTCTAGCTCTTCGAAT+GGG | + | chr2_4:50048088-50048107 | Msa0332780:CDS | 40.0% |
! | GCCTTTAGGTTACTCTCAAA+TGG | + | chr2_4:50048277-50048296 | Msa0332780:CDS | 40.0% |
! | TCATCCTACAGATACCCTTT+TGG | + | chr2_4:50048351-50048370 | Msa0332780:CDS | 40.0% |
!! | TCAACCAAAAGGGTATCTGT+AGG | - | chr2_4:50048358-50048377 | None:intergenic | 40.0% |
TATTTCCTTGATGTGCGTGA+TGG | + | chr2_4:50048733-50048752 | Msa0332780:CDS | 40.0% | |
TGTCAATTACCAGAGAGATG+TGG | + | chr2_4:50048808-50048827 | Msa0332780:CDS | 40.0% | |
! | CCAAATTTTCCACATCTCTC+TGG | - | chr2_4:50048820-50048839 | None:intergenic | 40.0% |
CCAGAGAGATGTGGAAAATT+TGG | + | chr2_4:50048817-50048836 | Msa0332780:CDS | 40.0% | |
TGTGAGGATAGTCAATGTGT+TGG | + | chr2_4:50048844-50048863 | Msa0332780:CDS | 40.0% | |
!! | TCAATGTGTTGGTTGTCCAT+TGG | + | chr2_4:50048855-50048874 | Msa0332780:CDS | 40.0% |
GCAAATGTTCCATTCTCCAA+TGG | - | chr2_4:50048874-50048893 | None:intergenic | 40.0% | |
TGGAGAATGGAACATTTGCT+TGG | + | chr2_4:50048875-50048894 | Msa0332780:CDS | 40.0% | |
ACCAAGGATTGTAAGTGTGT+TGG | + | chr2_4:50049039-50049058 | Msa0332780:CDS | 40.0% | |
TTTGTCAACTCAGGTGAACT+TGG | + | chr2_4:50047971-50047990 | Msa0332780:CDS | 40.0% | |
TTCAATGCTCCATTCCAAGT+TGG | + | chr2_4:50048040-50048059 | Msa0332780:CDS | 40.0% | |
!! | TTCACTCTAGCTCTTCGAAT+GGG | + | chr2_4:50048088-50048107 | Msa0332780:CDS | 40.0% |
! | GCCTTTAGGTTACTCTCAAA+TGG | + | chr2_4:50048277-50048296 | Msa0332780:CDS | 40.0% |
! | TCATCCTACAGATACCCTTT+TGG | + | chr2_4:50048351-50048370 | Msa0332780:CDS | 40.0% |
!! | TCAACCAAAAGGGTATCTGT+AGG | - | chr2_4:50048358-50048377 | None:intergenic | 40.0% |
TATTTCCTTGATGTGCGTGA+TGG | + | chr2_4:50048733-50048752 | Msa0332780:CDS | 40.0% | |
TGTCAATTACCAGAGAGATG+TGG | + | chr2_4:50048808-50048827 | Msa0332780:CDS | 40.0% | |
! | CCAAATTTTCCACATCTCTC+TGG | - | chr2_4:50048820-50048839 | None:intergenic | 40.0% |
CCAGAGAGATGTGGAAAATT+TGG | + | chr2_4:50048817-50048836 | Msa0332780:CDS | 40.0% | |
TGTGAGGATAGTCAATGTGT+TGG | + | chr2_4:50048844-50048863 | Msa0332780:CDS | 40.0% | |
!! | TCAATGTGTTGGTTGTCCAT+TGG | + | chr2_4:50048855-50048874 | Msa0332780:CDS | 40.0% |
GCAAATGTTCCATTCTCCAA+TGG | - | chr2_4:50048874-50048893 | None:intergenic | 40.0% | |
TGGAGAATGGAACATTTGCT+TGG | + | chr2_4:50048875-50048894 | Msa0332780:CDS | 40.0% | |
ACCAAGGATTGTAAGTGTGT+TGG | + | chr2_4:50049039-50049058 | Msa0332780:CDS | 40.0% | |
!! | AGAGCTAGAGTGAAGGCATT+TGG | - | chr2_4:50048082-50048101 | None:intergenic | 45.0% |
CATTCGAAGAGCTAGAGTGA+AGG | - | chr2_4:50048089-50048108 | None:intergenic | 45.0% | |
!! | CTTCACTCTAGCTCTTCGAA+TGG | + | chr2_4:50048087-50048106 | Msa0332780:CDS | 45.0% |
TCGAATGGGACTTCAACGTT+CGG | + | chr2_4:50048102-50048121 | Msa0332780:CDS | 45.0% | |
TGGGTGTGGGAAGCAAATAA+AGG | + | chr2_4:50048139-50048158 | Msa0332780:CDS | 45.0% | |
!! | CTTGTGTTGGCTAATGCTGA+TGG | + | chr2_4:50048211-50048230 | Msa0332780:CDS | 45.0% |
! | TTCCAATAGGGAATTGGCCT+AGG | - | chr2_4:50048511-50048530 | None:intergenic | 45.0% |
TTTCACAATGTTGCCTCTGG+TGG | + | chr2_4:50048625-50048644 | Msa0332780:CDS | 45.0% | |
AAACACCATCACGCACATCA+AGG | - | chr2_4:50048741-50048760 | None:intergenic | 45.0% | |
! | TTGATGTGCGTGATGGTGTT+TGG | + | chr2_4:50048740-50048759 | Msa0332780:CDS | 45.0% |
GTTGGTTGTCCATTGGAGAA+TGG | + | chr2_4:50048862-50048881 | Msa0332780:CDS | 45.0% | |
GCCAACACACTTACAATCCT+TGG | - | chr2_4:50049043-50049062 | None:intergenic | 45.0% | |
!! | AGAGCTAGAGTGAAGGCATT+TGG | - | chr2_4:50048082-50048101 | None:intergenic | 45.0% |
CATTCGAAGAGCTAGAGTGA+AGG | - | chr2_4:50048089-50048108 | None:intergenic | 45.0% | |
!! | CTTCACTCTAGCTCTTCGAA+TGG | + | chr2_4:50048087-50048106 | Msa0332780:CDS | 45.0% |
TCGAATGGGACTTCAACGTT+CGG | + | chr2_4:50048102-50048121 | Msa0332780:CDS | 45.0% | |
TGGGTGTGGGAAGCAAATAA+AGG | + | chr2_4:50048139-50048158 | Msa0332780:CDS | 45.0% | |
!! | CTTGTGTTGGCTAATGCTGA+TGG | + | chr2_4:50048211-50048230 | Msa0332780:CDS | 45.0% |
! | TTCCAATAGGGAATTGGCCT+AGG | - | chr2_4:50048511-50048530 | None:intergenic | 45.0% |
TTTCACAATGTTGCCTCTGG+TGG | + | chr2_4:50048625-50048644 | Msa0332780:CDS | 45.0% | |
AAACACCATCACGCACATCA+AGG | - | chr2_4:50048741-50048760 | None:intergenic | 45.0% | |
! | TTGATGTGCGTGATGGTGTT+TGG | + | chr2_4:50048740-50048759 | Msa0332780:CDS | 45.0% |
GTTGGTTGTCCATTGGAGAA+TGG | + | chr2_4:50048862-50048881 | Msa0332780:CDS | 45.0% | |
GCCAACACACTTACAATCCT+TGG | - | chr2_4:50049043-50049062 | None:intergenic | 45.0% | |
! | AACGTTCGGAGCAGCTTTTC+CGG | + | chr2_4:50048116-50048135 | Msa0332780:CDS | 50.0% |
TATTTGCTTCCCACACCCAC+CGG | - | chr2_4:50048138-50048157 | None:intergenic | 50.0% | |
CACCTAGGCCAATTCCCTAT+TGG | + | chr2_4:50048506-50048525 | Msa0332780:CDS | 50.0% | |
! | AACGTTCGGAGCAGCTTTTC+CGG | + | chr2_4:50048116-50048135 | Msa0332780:CDS | 50.0% |
TATTTGCTTCCCACACCCAC+CGG | - | chr2_4:50048138-50048157 | None:intergenic | 50.0% | |
CACCTAGGCCAATTCCCTAT+TGG | + | chr2_4:50048506-50048525 | Msa0332780:CDS | 50.0% | |
! | TTCGGAGCAGCTTTTCCGGT+GGG | + | chr2_4:50048120-50048139 | Msa0332780:CDS | 55.0% |
! | TTCGGAGCAGCTTTTCCGGT+GGG | + | chr2_4:50048120-50048139 | Msa0332780:CDS | 55.0% |
! | GTTCGGAGCAGCTTTTCCGG+TGG | + | chr2_4:50048119-50048138 | Msa0332780:CDS | 60.0% |
! | AGCAGCTTTTCCGGTGGGTG+TGG | + | chr2_4:50048125-50048144 | Msa0332780:CDS | 60.0% |
! | GCAGCTTTTCCGGTGGGTGT+GGG | + | chr2_4:50048126-50048145 | Msa0332780:CDS | 60.0% |
! | GTTCGGAGCAGCTTTTCCGG+TGG | + | chr2_4:50048119-50048138 | Msa0332780:CDS | 60.0% |
! | AGCAGCTTTTCCGGTGGGTG+TGG | + | chr2_4:50048125-50048144 | Msa0332780:CDS | 60.0% |
! | GCAGCTTTTCCGGTGGGTGT+GGG | + | chr2_4:50048126-50048145 | Msa0332780:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 50047866 | 50049173 | 50047866 | ID=Msa0332780;Name=Msa0332780 |
chr2_4 | mRNA | 50047866 | 50049173 | 50047866 | ID=Msa0332780-mRNA-1;Parent=Msa0332780;Name=Msa0332780-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|435 |
chr2_4 | exon | 50047866 | 50049173 | 50047866 | ID=Msa0332780-mRNA-1:exon:14946;Parent=Msa0332780-mRNA-1 |
chr2_4 | CDS | 50047866 | 50049173 | 50047866 | ID=Msa0332780-mRNA-1:cds;Parent=Msa0332780-mRNA-1 |
Gene Sequence |
Protein sequence |