Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225420 | XP_003597790.2 | 91.960 | 199 | 16 | 0 | 92 | 290 | 166 | 364 | 5.07e-133 | 391 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225420 | sp|Q9M8L2|FBK30_ARATH | 46.544 | 217 | 97 | 5 | 81 | 290 | 150 | 354 | 2.64e-55 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225420 | G7II60 | 91.960 | 199 | 16 | 0 | 92 | 290 | 166 | 364 | 2.42e-133 | 391 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0225420 | Msa0225720 | 0.970378 | 1.587369e-131 | -8.615850e-47 |
| Msa0225420 | Msa0256570 | 0.819957 | 8.840130e-53 | -8.615850e-47 |
| Msa0225420 | Msa0334300 | 0.826798 | 2.226568e-54 | -8.615850e-47 |
| Msa0225420 | Msa0412820 | 0.815622 | 8.410677e-52 | -8.615850e-47 |
| Msa0225420 | Msa0504430 | 0.804465 | 2.132747e-49 | -8.615850e-47 |
| Msa0225420 | Msa0783680 | 0.866946 | 1.965911e-65 | -8.615850e-47 |
| Msa0225420 | Msa0859120 | 0.843941 | 1.027739e-58 | -8.615850e-47 |
| Msa0225420 | Msa1269440 | 0.934271 | 5.230406e-96 | -8.615850e-47 |
| Msa0225420 | Msa1335090 | 0.837729 | 4.377686e-57 | -8.615850e-47 |
| Msa0225420 | Msa1422380 | 0.947656 | 4.401290e-106 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225420 | MtrunA17_Chr2g0332031 | 91.960 | 199 | 16 | 0 | 92 | 290 | 166 | 364 | 4.66e-137 | 391 |
| Msa0225420 | MtrunA17_Chr2g0332021 | 88.189 | 127 | 15 | 0 | 97 | 223 | 1 | 127 | 5.50e-80 | 238 |
| Msa0225420 | MtrunA17_Chr4g0004201 | 40.947 | 359 | 142 | 7 | 1 | 290 | 3 | 360 | 2.56e-78 | 242 |
| Msa0225420 | MtrunA17_Chr8g0378571 | 34.906 | 212 | 103 | 8 | 84 | 290 | 160 | 341 | 2.22e-22 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225420 | AT1G80440.1 | 46.544 | 217 | 97 | 5 | 81 | 290 | 150 | 354 | 2.68e-56 | 185 |
| Msa0225420 | AT1G15670.1 | 47.030 | 202 | 97 | 4 | 92 | 290 | 165 | 359 | 4.04e-54 | 180 |
| Msa0225420 | AT1G15670.1 | 37.500 | 104 | 64 | 1 | 1 | 104 | 1 | 103 | 2.84e-13 | 69.7 |
| Msa0225420 | AT3G59940.1 | 32.178 | 202 | 114 | 6 | 98 | 279 | 209 | 407 | 2.45e-16 | 79.0 |
| Msa0225420 | AT2G44130.1 | 41.346 | 104 | 44 | 2 | 98 | 194 | 202 | 295 | 3.99e-14 | 72.4 |
Find 98 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACATTTAGTTTATAAAT+TGG | 0.179879 | 2_1:-75573472 | None:intergenic |
| GCTACTATGGAGTTGATTTC+AGG | 0.182172 | 2_1:+75573226 | None:intergenic |
| TGGATTGGGTCTAGTGGGTT+TGG | 0.289853 | 2_1:+75574196 | Msa0225420:CDS |
| AGTTTCATACCAGGAATTTC+CGG | 0.301498 | 2_1:+75573285 | Msa0225420:CDS |
| TGGGTTTGGAGAACCTTATA+TGG | 0.316034 | 2_1:+75574210 | Msa0225420:CDS |
| CACTCTCGTGCTATGTCTTC+TGG | 0.327599 | 2_1:-75573253 | None:intergenic |
| TCACGCTCCCTCGCCATATC+AGG | 0.331031 | 2_1:-75573839 | None:intergenic |
| TACTCCAAACACCATTCTTC+AGG | 0.353583 | 2_1:-75574246 | None:intergenic |
| TCCAACACAAAGCCCATATA+AGG | 0.360295 | 2_1:-75574223 | None:intergenic |
| CTTGGGCAGATGCATTGTTA+TGG | 0.371889 | 2_1:+75574176 | Msa0225420:CDS |
| TGGCTACCGCCGGAAATTCC+TGG | 0.381513 | 2_1:-75573294 | None:intergenic |
| ATACATTTAGTTTATAAATT+GGG | 0.382336 | 2_1:-75573471 | None:intergenic |
| AATTTATAAACTAAATGTAT+TGG | 0.385908 | 2_1:+75573474 | Msa0225420:CDS |
| AGACATAGCACGAGAGTGTT+TGG | 0.398695 | 2_1:+75573258 | Msa0225420:CDS |
| TTCACCGGCCACGTTCAATC+TGG | 0.407052 | 2_1:+75574289 | Msa0225420:CDS |
| TGTTGCTTGTGTGGGAGCTT+GGG | 0.410270 | 2_1:+75574159 | Msa0225420:CDS |
| GTGGATCCCGCTTCCTGATA+TGG | 0.419518 | 2_1:+75573826 | Msa0225420:CDS |
| GTGGAGGTGGGGTCCGGTCG+AGG | 0.421615 | 2_1:+75573985 | Msa0225420:CDS |
| GAGAAGAATGTACATGTGTA+AGG | 0.422768 | 2_1:+75574066 | Msa0225420:CDS |
| TCGATGTAGCCACGTGGAGG+TGG | 0.423970 | 2_1:+75573972 | Msa0225420:CDS |
| AGGTGGTGGCGAAGGTGCCT+AGG | 0.429241 | 2_1:+75574125 | Msa0225420:CDS |
| GATGATGTGGTGGCATTGGA+TGG | 0.436126 | 2_1:+75574091 | Msa0225420:CDS |
| TTGTGTGGATGGTTGTGAAT+TGG | 0.440798 | 2_1:+75574042 | Msa0225420:CDS |
| CAGATGCATTGTTATGGATT+GGG | 0.443791 | 2_1:+75574182 | Msa0225420:CDS |
| ACCTTATATGGGCTTTGTGT+TGG | 0.447831 | 2_1:+75574222 | Msa0225420:CDS |
| GCAGATGCATTGTTATGGAT+TGG | 0.454389 | 2_1:+75574181 | Msa0225420:CDS |
| GCCGTGTCGCGGAGGAGTAC+AGG | 0.457306 | 2_1:+75573362 | Msa0225420:CDS |
| AATGTATTGGAAACTGAAAC+AGG | 0.458468 | 2_1:+75573487 | Msa0225420:CDS |
| ATGTTGCTTGTGTGGGAGCT+TGG | 0.459885 | 2_1:+75574158 | Msa0225420:CDS |
| GGGTTTGGAGAACCTTATAT+GGG | 0.462959 | 2_1:+75574211 | Msa0225420:CDS |
| CAACCATCCACACAAGTCCT+TGG | 0.468884 | 2_1:-75574034 | None:intergenic |
| TGTTATGGATTGGGTCTAGT+GGG | 0.471404 | 2_1:+75574191 | Msa0225420:CDS |
| TGGACCTGAAGAATGGTGTT+TGG | 0.471703 | 2_1:+75574242 | Msa0225420:CDS |
| GGGTGATGATGTGGTGGCAT+TGG | 0.471752 | 2_1:+75574087 | Msa0225420:CDS |
| CGTGCCAGAGCCATTGTCTC+CGG | 0.476636 | 2_1:-75573885 | None:intergenic |
| CGATGTAGCCACGTGGAGGT+GGG | 0.477914 | 2_1:+75573973 | Msa0225420:CDS |
| AGCCACGTGGAGGTGGGGTC+CGG | 0.487081 | 2_1:+75573979 | Msa0225420:CDS |
| TGTAGCTTTAGCCAATAAAC+CGG | 0.493397 | 2_1:-75573443 | None:intergenic |
| TTGCTCACGGTGGCTACCGC+CGG | 0.494147 | 2_1:-75573304 | None:intergenic |
| CGAAGGTGCCTAGGGAGATA+AGG | 0.500530 | 2_1:+75574134 | Msa0225420:CDS |
| TGCATCAGATCATGAAAGAA+TGG | 0.501033 | 2_1:+75573727 | Msa0225420:intron |
| TTTGTGTTGGACCTGAAGAA+TGG | 0.506335 | 2_1:+75574235 | Msa0225420:CDS |
| TGTTTGCCACCCTTTGCTCA+CGG | 0.517498 | 2_1:-75573317 | None:intergenic |
| GGTGGTGGCGAAGGTGCCTA+GGG | 0.518802 | 2_1:+75574126 | Msa0225420:CDS |
| GAAAGAATGGTCTATGTGGC+AGG | 0.519321 | 2_1:+75573740 | Msa0225420:CDS |
| CGGTAGCCACCGTGAGCAAA+GGG | 0.527349 | 2_1:+75573308 | Msa0225420:CDS |
| CCCTCGCCATATCAGGAAGC+GGG | 0.530716 | 2_1:-75573832 | None:intergenic |
| TGTGCCGGAGACAATGGCTC+TGG | 0.531010 | 2_1:+75573881 | Msa0225420:CDS |
| GCGGTAGCCACCGTGAGCAA+AGG | 0.533392 | 2_1:+75573307 | Msa0225420:CDS |
| TTGTTATGGATTGGGTCTAG+TGG | 0.542297 | 2_1:+75574190 | Msa0225420:CDS |
| TGGTGACACGTGGAAGGTGG+TGG | 0.543700 | 2_1:+75574111 | Msa0225420:CDS |
| GGCACGATCAAAGTTGTTGG+TGG | 0.544929 | 2_1:+75573902 | Msa0225420:CDS |
| GCCGGAGTTTCGCCGTGTCG+CGG | 0.549017 | 2_1:+75573351 | Msa0225420:CDS |
| GCAACCAGATTGAACGTGGC+CGG | 0.553033 | 2_1:-75574293 | None:intergenic |
| TCCCTCGCCATATCAGGAAG+CGG | 0.557334 | 2_1:-75573833 | None:intergenic |
| CACGTGGAAGGTGGTGGCGA+AGG | 0.560862 | 2_1:+75574117 | Msa0225420:CDS |
| TCCCGCTTCCTGATATGGCG+AGG | 0.561759 | 2_1:+75573831 | Msa0225420:CDS |
| GATAAGGAATGTTGCTTGTG+TGG | 0.563323 | 2_1:+75574150 | Msa0225420:CDS |
| TCTGGCACGATCAAAGTTGT+TGG | 0.564275 | 2_1:+75573899 | Msa0225420:CDS |
| ATTTGGACTGAACCGTGACT+AGG | 0.569932 | 2_1:-75573399 | None:intergenic |
| TGGATGATGCCACATGTCCA+AGG | 0.571672 | 2_1:+75574017 | Msa0225420:CDS |
| GATGTAGCCACGTGGAGGTG+GGG | 0.572404 | 2_1:+75573974 | Msa0225420:CDS |
| TCCGCGACACGGCGAAACTC+CGG | 0.575386 | 2_1:-75573352 | None:intergenic |
| AGAAGAATGTACATGTGTAA+GGG | 0.581931 | 2_1:+75574067 | Msa0225420:CDS |
| GCAACATTCCTTATCTCCCT+AGG | 0.592170 | 2_1:-75574142 | None:intergenic |
| CACACAAGTCCTTGGACATG+TGG | 0.595115 | 2_1:-75574026 | None:intergenic |
| GGATATCGTACGGAGATGCA+AGG | 0.595851 | 2_1:+75573923 | Msa0225420:CDS |
| AGTTGTTGGTGGATATCGTA+CGG | 0.598708 | 2_1:+75573913 | Msa0225420:CDS |
| CCCGCTTCCTGATATGGCGA+GGG | 0.599930 | 2_1:+75573832 | Msa0225420:CDS |
| TGTCCAAGGACTTGTGTGGA+TGG | 0.600952 | 2_1:+75574031 | Msa0225420:CDS |
| GAAAACCCAGAAAATTTCAC+CGG | 0.601148 | 2_1:+75574274 | Msa0225420:CDS |
| ATTGGATGGTGACACGTGGA+AGG | 0.617577 | 2_1:+75574105 | Msa0225420:CDS |
| GAGGTGGGGTCCGGTCGAGG+AGG | 0.618236 | 2_1:+75573988 | Msa0225420:CDS |
| ATAAGGAATGTTGCTTGTGT+GGG | 0.622737 | 2_1:+75574151 | Msa0225420:CDS |
| ACCTGTACTCCTCCGCGACA+CGG | 0.630812 | 2_1:-75573363 | None:intergenic |
| TCATGAAAGAATGGTCTATG+TGG | 0.631561 | 2_1:+75573736 | Msa0225420:CDS |
| GGATGGTGACACGTGGAAGG+TGG | 0.634958 | 2_1:+75574108 | Msa0225420:CDS |
| ATGCTCAGAAATCCTAGTCA+CGG | 0.636602 | 2_1:+75573387 | Msa0225420:CDS |
| GCAAACAGAGATTCAAACGC+CGG | 0.637123 | 2_1:+75573333 | Msa0225420:CDS |
| GATATCGTACGGAGATGCAA+GGG | 0.639764 | 2_1:+75573924 | Msa0225420:CDS |
| CATGTGTAAGGGTGATGATG+TGG | 0.641473 | 2_1:+75574078 | Msa0225420:CDS |
| GTCAGCATTTGCTTACGATG+TGG | 0.642705 | 2_1:+75573793 | Msa0225420:CDS |
| TAGCCACCGTGAGCAAAGGG+TGG | 0.650702 | 2_1:+75573311 | Msa0225420:CDS |
| TTTGGTTCGAGTTTCATACC+AGG | 0.651758 | 2_1:+75573276 | Msa0225420:CDS |
| GACCGGACCCCACCTCCACG+TGG | 0.662176 | 2_1:-75573981 | None:intergenic |
| GCGATTCGAACGTAGTGCTG+AGG | 0.664187 | 2_1:+75573946 | Msa0225420:CDS |
| ACGATGTGGCAAATGATGTG+TGG | 0.666045 | 2_1:+75573807 | Msa0225420:CDS |
| GGAGTTTCGCCGTGTCGCGG+AGG | 0.666071 | 2_1:+75573354 | Msa0225420:CDS |
| AAAAGCAACCAGATTGAACG+TGG | 0.667532 | 2_1:-75574297 | None:intergenic |
| GTGTAAGGGTGATGATGTGG+TGG | 0.677538 | 2_1:+75574081 | Msa0225420:CDS |
| AGAATGGTCTATGTGGCAGG+AGG | 0.679340 | 2_1:+75573743 | Msa0225420:CDS |
| TTGCCACCCTTTGCTCACGG+TGG | 0.683953 | 2_1:-75573314 | None:intergenic |
| AGTTCGATGTAGCCACGTGG+AGG | 0.685810 | 2_1:+75573969 | Msa0225420:CDS |
| TTCATACCAGGAATTTCCGG+CGG | 0.694230 | 2_1:+75573288 | Msa0225420:CDS |
| TGGCATTGGATGGTGACACG+TGG | 0.697013 | 2_1:+75574101 | Msa0225420:CDS |
| TGTGGCAGGAGGACATGACG+AGG | 0.708701 | 2_1:+75573754 | Msa0225420:CDS |
| AGGAGTTCGATGTAGCCACG+TGG | 0.736829 | 2_1:+75573966 | Msa0225420:CDS |
| CACATGTCCAAGGACTTGTG+TGG | 0.739846 | 2_1:+75574027 | Msa0225420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACATTTAGTTTATAAATT+GGG | - | chr2_1:75573474-75573493 | None:intergenic | 10.0% |
| !!! | AATACATTTAGTTTATAAAT+TGG | - | chr2_1:75573475-75573494 | None:intergenic | 10.0% |
| !! | AATTTATAAACTAAATGTAT+TGG | + | chr2_1:75573474-75573493 | Msa0225420:CDS | 10.0% |
| !!! | ATACATTTAGTTTATAAATT+GGG | - | chr2_1:75573474-75573493 | None:intergenic | 10.0% |
| !!! | AATACATTTAGTTTATAAAT+TGG | - | chr2_1:75573475-75573494 | None:intergenic | 10.0% |
| !! | AATTTATAAACTAAATGTAT+TGG | + | chr2_1:75573474-75573493 | Msa0225420:CDS | 10.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | - | chr2_1:75573419-75573438 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | + | chr2_1:75573656-75573675 | Msa0225420:intron | 25.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | - | chr2_1:75573419-75573438 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | + | chr2_1:75573656-75573675 | Msa0225420:intron | 25.0% |
| GATTCAGAAAAAAGCAAAAC+CGG | + | chr2_1:75573424-75573443 | Msa0225420:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | + | chr2_1:75573432-75573451 | Msa0225420:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | + | chr2_1:75573487-75573506 | Msa0225420:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | + | chr2_1:75573621-75573640 | Msa0225420:intron | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | + | chr2_1:75574067-75574086 | Msa0225420:CDS | 30.0% | |
| GATTCAGAAAAAAGCAAAAC+CGG | + | chr2_1:75573424-75573443 | Msa0225420:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | + | chr2_1:75573432-75573451 | Msa0225420:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | + | chr2_1:75573487-75573506 | Msa0225420:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | + | chr2_1:75573621-75573640 | Msa0225420:intron | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | + | chr2_1:75574067-75574086 | Msa0225420:CDS | 30.0% | |
| AGTTTCATACCAGGAATTTC+CGG | + | chr2_1:75573285-75573304 | Msa0225420:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | - | chr2_1:75573446-75573465 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | + | chr2_1:75573494-75573513 | Msa0225420:intron | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | + | chr2_1:75573555-75573574 | Msa0225420:intron | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | + | chr2_1:75573582-75573601 | Msa0225420:intron | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | + | chr2_1:75573583-75573602 | Msa0225420:intron | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | + | chr2_1:75573586-75573605 | Msa0225420:intron | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | - | chr2_1:75573618-75573637 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | - | chr2_1:75573619-75573638 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | + | chr2_1:75573727-75573746 | Msa0225420:intron | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | + | chr2_1:75573736-75573755 | Msa0225420:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | + | chr2_1:75573866-75573885 | Msa0225420:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | + | chr2_1:75574066-75574085 | Msa0225420:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | + | chr2_1:75574151-75574170 | Msa0225420:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | + | chr2_1:75574182-75574201 | Msa0225420:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | + | chr2_1:75574274-75574293 | Msa0225420:CDS | 35.0% | |
| AGTTTCATACCAGGAATTTC+CGG | + | chr2_1:75573285-75573304 | Msa0225420:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | - | chr2_1:75573446-75573465 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | + | chr2_1:75573494-75573513 | Msa0225420:intron | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | + | chr2_1:75573555-75573574 | Msa0225420:intron | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | + | chr2_1:75573582-75573601 | Msa0225420:intron | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | + | chr2_1:75573583-75573602 | Msa0225420:intron | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | + | chr2_1:75573586-75573605 | Msa0225420:intron | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | - | chr2_1:75573618-75573637 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | - | chr2_1:75573619-75573638 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | + | chr2_1:75573727-75573746 | Msa0225420:intron | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | + | chr2_1:75573736-75573755 | Msa0225420:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | + | chr2_1:75573866-75573885 | Msa0225420:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | + | chr2_1:75574066-75574085 | Msa0225420:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | + | chr2_1:75574151-75574170 | Msa0225420:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | + | chr2_1:75574182-75574201 | Msa0225420:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | + | chr2_1:75574274-75574293 | Msa0225420:CDS | 35.0% | |
| ! | TTTGGTTCGAGTTTCATACC+AGG | + | chr2_1:75573276-75573295 | Msa0225420:CDS | 40.0% |
| ATGCTCAGAAATCCTAGTCA+CGG | + | chr2_1:75573387-75573406 | Msa0225420:CDS | 40.0% | |
| GGTAACCCTTCACTTAATTC+GGG | - | chr2_1:75573538-75573557 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | - | chr2_1:75573539-75573558 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | - | chr2_1:75573559-75573578 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | + | chr2_1:75573556-75573575 | Msa0225420:intron | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | - | chr2_1:75573560-75573579 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | + | chr2_1:75573562-75573581 | Msa0225420:intron | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | + | chr2_1:75573563-75573582 | Msa0225420:intron | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | + | chr2_1:75573590-75573609 | Msa0225420:intron | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | + | chr2_1:75573591-75573610 | Msa0225420:intron | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | - | chr2_1:75573710-75573729 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | - | chr2_1:75573711-75573730 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGTGGATATCGTA+CGG | + | chr2_1:75573913-75573932 | Msa0225420:CDS | 40.0% |
| TTGTGTGGATGGTTGTGAAT+TGG | + | chr2_1:75574042-75574061 | Msa0225420:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | + | chr2_1:75574150-75574169 | Msa0225420:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | + | chr2_1:75574181-75574200 | Msa0225420:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | + | chr2_1:75574190-75574209 | Msa0225420:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | + | chr2_1:75574191-75574210 | Msa0225420:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | + | chr2_1:75574210-75574229 | Msa0225420:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | + | chr2_1:75574211-75574230 | Msa0225420:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | + | chr2_1:75574222-75574241 | Msa0225420:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | - | chr2_1:75574226-75574245 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | + | chr2_1:75574235-75574254 | Msa0225420:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | - | chr2_1:75574249-75574268 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | - | chr2_1:75574300-75574319 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | + | chr2_1:75574300-75574319 | Msa0225420:CDS | 40.0% |
| ! | TTTGGTTCGAGTTTCATACC+AGG | + | chr2_1:75573276-75573295 | Msa0225420:CDS | 40.0% |
| ATGCTCAGAAATCCTAGTCA+CGG | + | chr2_1:75573387-75573406 | Msa0225420:CDS | 40.0% | |
| GGTAACCCTTCACTTAATTC+GGG | - | chr2_1:75573538-75573557 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | - | chr2_1:75573539-75573558 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | - | chr2_1:75573559-75573578 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | + | chr2_1:75573556-75573575 | Msa0225420:intron | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | - | chr2_1:75573560-75573579 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | + | chr2_1:75573562-75573581 | Msa0225420:intron | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | + | chr2_1:75573563-75573582 | Msa0225420:intron | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | + | chr2_1:75573590-75573609 | Msa0225420:intron | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | + | chr2_1:75573591-75573610 | Msa0225420:intron | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | - | chr2_1:75573710-75573729 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | - | chr2_1:75573711-75573730 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGTGGATATCGTA+CGG | + | chr2_1:75573913-75573932 | Msa0225420:CDS | 40.0% |
| TTGTGTGGATGGTTGTGAAT+TGG | + | chr2_1:75574042-75574061 | Msa0225420:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | + | chr2_1:75574150-75574169 | Msa0225420:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | + | chr2_1:75574181-75574200 | Msa0225420:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | + | chr2_1:75574190-75574209 | Msa0225420:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | + | chr2_1:75574191-75574210 | Msa0225420:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | + | chr2_1:75574210-75574229 | Msa0225420:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | + | chr2_1:75574211-75574230 | Msa0225420:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | + | chr2_1:75574222-75574241 | Msa0225420:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | - | chr2_1:75574226-75574245 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | + | chr2_1:75574235-75574254 | Msa0225420:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | - | chr2_1:75574249-75574268 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | - | chr2_1:75574300-75574319 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | + | chr2_1:75574300-75574319 | Msa0225420:CDS | 40.0% |
| !! | AGACATAGCACGAGAGTGTT+TGG | + | chr2_1:75573258-75573277 | Msa0225420:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | + | chr2_1:75573288-75573307 | Msa0225420:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | + | chr2_1:75573333-75573352 | Msa0225420:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | - | chr2_1:75573402-75573421 | None:intergenic | 45.0% | |
| ! | TATTTGGAGCGAGTTGCCAA+TGG | + | chr2_1:75573510-75573529 | Msa0225420:intron | 45.0% |
| ! | ATTTGGAGCGAGTTGCCAAT+GGG | + | chr2_1:75573511-75573530 | Msa0225420:intron | 45.0% |
| TCACTTAATTCGGGTCCCAT+TGG | - | chr2_1:75573529-75573548 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | + | chr2_1:75573529-75573548 | Msa0225420:intron | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | + | chr2_1:75573530-75573549 | Msa0225420:intron | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | + | chr2_1:75573740-75573759 | Msa0225420:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | + | chr2_1:75573793-75573812 | Msa0225420:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | + | chr2_1:75573807-75573826 | Msa0225420:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | + | chr2_1:75573899-75573918 | Msa0225420:CDS | 45.0% | |
| GATATCGTACGGAGATGCAA+GGG | + | chr2_1:75573924-75573943 | Msa0225420:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | + | chr2_1:75574078-75574097 | Msa0225420:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | - | chr2_1:75574145-75574164 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | + | chr2_1:75574176-75574195 | Msa0225420:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | + | chr2_1:75574242-75574261 | Msa0225420:CDS | 45.0% | |
| !! | AGACATAGCACGAGAGTGTT+TGG | + | chr2_1:75573258-75573277 | Msa0225420:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | + | chr2_1:75573288-75573307 | Msa0225420:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | + | chr2_1:75573333-75573352 | Msa0225420:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | - | chr2_1:75573402-75573421 | None:intergenic | 45.0% | |
| ! | TATTTGGAGCGAGTTGCCAA+TGG | + | chr2_1:75573510-75573529 | Msa0225420:intron | 45.0% |
| ! | ATTTGGAGCGAGTTGCCAAT+GGG | + | chr2_1:75573511-75573530 | Msa0225420:intron | 45.0% |
| TCACTTAATTCGGGTCCCAT+TGG | - | chr2_1:75573529-75573548 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | + | chr2_1:75573529-75573548 | Msa0225420:intron | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | + | chr2_1:75573530-75573549 | Msa0225420:intron | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | + | chr2_1:75573740-75573759 | Msa0225420:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | + | chr2_1:75573793-75573812 | Msa0225420:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | + | chr2_1:75573807-75573826 | Msa0225420:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | + | chr2_1:75573899-75573918 | Msa0225420:CDS | 45.0% | |
| GATATCGTACGGAGATGCAA+GGG | + | chr2_1:75573924-75573943 | Msa0225420:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | + | chr2_1:75574078-75574097 | Msa0225420:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | - | chr2_1:75574145-75574164 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | + | chr2_1:75574176-75574195 | Msa0225420:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | + | chr2_1:75574242-75574261 | Msa0225420:CDS | 45.0% | |
| CACTCTCGTGCTATGTCTTC+TGG | - | chr2_1:75573256-75573275 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | - | chr2_1:75573320-75573339 | None:intergenic | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | + | chr2_1:75573743-75573762 | Msa0225420:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | + | chr2_1:75573875-75573894 | Msa0225420:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | + | chr2_1:75573902-75573921 | Msa0225420:CDS | 50.0% | |
| GGATATCGTACGGAGATGCA+AGG | + | chr2_1:75573923-75573942 | Msa0225420:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | - | chr2_1:75574001-75574020 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | + | chr2_1:75574017-75574036 | Msa0225420:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | - | chr2_1:75574029-75574048 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | + | chr2_1:75574027-75574046 | Msa0225420:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | + | chr2_1:75574031-75574050 | Msa0225420:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | - | chr2_1:75574037-75574056 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | + | chr2_1:75574081-75574100 | Msa0225420:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | + | chr2_1:75574091-75574110 | Msa0225420:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | + | chr2_1:75574105-75574124 | Msa0225420:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | + | chr2_1:75574158-75574177 | Msa0225420:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | + | chr2_1:75574159-75574178 | Msa0225420:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | + | chr2_1:75574196-75574215 | Msa0225420:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | - | chr2_1:75574282-75574301 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | - | chr2_1:75574283-75574302 | None:intergenic | 50.0% |
| CACTCTCGTGCTATGTCTTC+TGG | - | chr2_1:75573256-75573275 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | - | chr2_1:75573320-75573339 | None:intergenic | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | + | chr2_1:75573743-75573762 | Msa0225420:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | + | chr2_1:75573875-75573894 | Msa0225420:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | + | chr2_1:75573902-75573921 | Msa0225420:CDS | 50.0% | |
| GGATATCGTACGGAGATGCA+AGG | + | chr2_1:75573923-75573942 | Msa0225420:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | - | chr2_1:75574001-75574020 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | + | chr2_1:75574017-75574036 | Msa0225420:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | - | chr2_1:75574029-75574048 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | + | chr2_1:75574027-75574046 | Msa0225420:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | + | chr2_1:75574031-75574050 | Msa0225420:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | - | chr2_1:75574037-75574056 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | + | chr2_1:75574081-75574100 | Msa0225420:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | + | chr2_1:75574091-75574110 | Msa0225420:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | + | chr2_1:75574105-75574124 | Msa0225420:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | + | chr2_1:75574158-75574177 | Msa0225420:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | + | chr2_1:75574159-75574178 | Msa0225420:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | + | chr2_1:75574196-75574215 | Msa0225420:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | - | chr2_1:75574282-75574301 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | - | chr2_1:75574283-75574302 | None:intergenic | 50.0% |
| GAGGATGGGACCCTGATTCA+TGG | + | chr2_1:75573605-75573624 | Msa0225420:intron | 55.0% | |
| TTATCTGCTACGTGGCGTCG+CGG | + | chr2_1:75573664-75573683 | Msa0225420:intron | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | - | chr2_1:75573701-75573720 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | + | chr2_1:75573826-75573845 | Msa0225420:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | - | chr2_1:75573836-75573855 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | + | chr2_1:75573946-75573965 | Msa0225420:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | + | chr2_1:75573966-75573985 | Msa0225420:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | + | chr2_1:75573969-75573988 | Msa0225420:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | + | chr2_1:75573997-75574016 | Msa0225420:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | + | chr2_1:75574087-75574106 | Msa0225420:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | + | chr2_1:75574101-75574120 | Msa0225420:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | + | chr2_1:75574134-75574153 | Msa0225420:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | + | chr2_1:75574289-75574308 | Msa0225420:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | - | chr2_1:75574296-75574315 | None:intergenic | 55.0% | |
| GAGGATGGGACCCTGATTCA+TGG | + | chr2_1:75573605-75573624 | Msa0225420:intron | 55.0% | |
| TTATCTGCTACGTGGCGTCG+CGG | + | chr2_1:75573664-75573683 | Msa0225420:intron | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | - | chr2_1:75573701-75573720 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | + | chr2_1:75573826-75573845 | Msa0225420:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | - | chr2_1:75573836-75573855 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | + | chr2_1:75573946-75573965 | Msa0225420:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | + | chr2_1:75573966-75573985 | Msa0225420:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | + | chr2_1:75573969-75573988 | Msa0225420:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | + | chr2_1:75573997-75574016 | Msa0225420:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | + | chr2_1:75574087-75574106 | Msa0225420:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | + | chr2_1:75574101-75574120 | Msa0225420:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | + | chr2_1:75574134-75574153 | Msa0225420:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | + | chr2_1:75574289-75574308 | Msa0225420:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | - | chr2_1:75574296-75574315 | None:intergenic | 55.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | - | chr2_1:75573297-75573316 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | + | chr2_1:75573308-75573327 | Msa0225420:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | + | chr2_1:75573311-75573330 | Msa0225420:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | - | chr2_1:75573317-75573336 | None:intergenic | 60.0% | |
| ACCTGTACTCCTCCGCGACA+CGG | - | chr2_1:75573366-75573385 | None:intergenic | 60.0% | |
| TATCTGCTACGTGGCGTCGC+GGG | + | chr2_1:75573665-75573684 | Msa0225420:intron | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | + | chr2_1:75573754-75573773 | Msa0225420:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | + | chr2_1:75573831-75573850 | Msa0225420:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | - | chr2_1:75573835-75573854 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | + | chr2_1:75573832-75573851 | Msa0225420:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | - | chr2_1:75573842-75573861 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | + | chr2_1:75573881-75573900 | Msa0225420:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | - | chr2_1:75573888-75573907 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | + | chr2_1:75573972-75573991 | Msa0225420:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | + | chr2_1:75573973-75573992 | Msa0225420:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | + | chr2_1:75573974-75573993 | Msa0225420:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | + | chr2_1:75574108-75574127 | Msa0225420:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | + | chr2_1:75574111-75574130 | Msa0225420:CDS | 60.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | - | chr2_1:75573297-75573316 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | + | chr2_1:75573308-75573327 | Msa0225420:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | + | chr2_1:75573311-75573330 | Msa0225420:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | - | chr2_1:75573317-75573336 | None:intergenic | 60.0% | |
| ACCTGTACTCCTCCGCGACA+CGG | - | chr2_1:75573366-75573385 | None:intergenic | 60.0% | |
| TATCTGCTACGTGGCGTCGC+GGG | + | chr2_1:75573665-75573684 | Msa0225420:intron | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | + | chr2_1:75573754-75573773 | Msa0225420:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | + | chr2_1:75573831-75573850 | Msa0225420:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | - | chr2_1:75573835-75573854 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | + | chr2_1:75573832-75573851 | Msa0225420:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | - | chr2_1:75573842-75573861 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | + | chr2_1:75573881-75573900 | Msa0225420:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | - | chr2_1:75573888-75573907 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | + | chr2_1:75573972-75573991 | Msa0225420:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | + | chr2_1:75573973-75573992 | Msa0225420:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | + | chr2_1:75573974-75573993 | Msa0225420:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | + | chr2_1:75574108-75574127 | Msa0225420:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | + | chr2_1:75574111-75574130 | Msa0225420:CDS | 60.0% | |
| TTGCTCACGGTGGCTACCGC+CGG | - | chr2_1:75573307-75573326 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | + | chr2_1:75573307-75573326 | Msa0225420:CDS | 65.0% | |
| TCCGCGACACGGCGAAACTC+CGG | - | chr2_1:75573355-75573374 | None:intergenic | 65.0% | |
| ATCTGCTACGTGGCGTCGCG+GGG | + | chr2_1:75573666-75573685 | Msa0225420:intron | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | - | chr2_1:75573693-75573712 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | + | chr2_1:75574117-75574136 | Msa0225420:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | + | chr2_1:75574125-75574144 | Msa0225420:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | + | chr2_1:75574126-75574145 | Msa0225420:CDS | 65.0% |
| TTGCTCACGGTGGCTACCGC+CGG | - | chr2_1:75573307-75573326 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | + | chr2_1:75573307-75573326 | Msa0225420:CDS | 65.0% | |
| TCCGCGACACGGCGAAACTC+CGG | - | chr2_1:75573355-75573374 | None:intergenic | 65.0% | |
| ATCTGCTACGTGGCGTCGCG+GGG | + | chr2_1:75573666-75573685 | Msa0225420:intron | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | - | chr2_1:75573693-75573712 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | + | chr2_1:75574117-75574136 | Msa0225420:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | + | chr2_1:75574125-75574144 | Msa0225420:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | + | chr2_1:75574126-75574145 | Msa0225420:CDS | 65.0% |
| GCCGGAGTTTCGCCGTGTCG+CGG | + | chr2_1:75573351-75573370 | Msa0225420:CDS | 70.0% | |
| GGAGTTTCGCCGTGTCGCGG+AGG | + | chr2_1:75573354-75573373 | Msa0225420:CDS | 70.0% | |
| ! | GCCGTGTCGCGGAGGAGTAC+AGG | + | chr2_1:75573362-75573381 | Msa0225420:CDS | 70.0% |
| TCTGCTACGTGGCGTCGCGG+GGG | + | chr2_1:75573667-75573686 | Msa0225420:intron | 70.0% | |
| CGGGGGCCGATATGCCTGGT+GGG | + | chr2_1:75573684-75573703 | Msa0225420:intron | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | + | chr2_1:75573979-75573998 | Msa0225420:CDS | 70.0% | |
| GCCGGAGTTTCGCCGTGTCG+CGG | + | chr2_1:75573351-75573370 | Msa0225420:CDS | 70.0% | |
| GGAGTTTCGCCGTGTCGCGG+AGG | + | chr2_1:75573354-75573373 | Msa0225420:CDS | 70.0% | |
| ! | GCCGTGTCGCGGAGGAGTAC+AGG | + | chr2_1:75573362-75573381 | Msa0225420:CDS | 70.0% |
| TCTGCTACGTGGCGTCGCGG+GGG | + | chr2_1:75573667-75573686 | Msa0225420:intron | 70.0% | |
| CGGGGGCCGATATGCCTGGT+GGG | + | chr2_1:75573684-75573703 | Msa0225420:intron | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | + | chr2_1:75573979-75573998 | Msa0225420:CDS | 70.0% | |
| GTCGCGGGGGCCGATATGCC+TGG | + | chr2_1:75573680-75573699 | Msa0225420:intron | 75.0% | |
| GCGGGGGCCGATATGCCTGG+TGG | + | chr2_1:75573683-75573702 | Msa0225420:intron | 75.0% | |
| GACCGGACCCCACCTCCACG+TGG | - | chr2_1:75573984-75574003 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | + | chr2_1:75573985-75574004 | Msa0225420:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | + | chr2_1:75573988-75574007 | Msa0225420:CDS | 75.0% | |
| GTCGCGGGGGCCGATATGCC+TGG | + | chr2_1:75573680-75573699 | Msa0225420:intron | 75.0% | |
| GCGGGGGCCGATATGCCTGG+TGG | + | chr2_1:75573683-75573702 | Msa0225420:intron | 75.0% | |
| GACCGGACCCCACCTCCACG+TGG | - | chr2_1:75573984-75574003 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | + | chr2_1:75573985-75574004 | Msa0225420:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | + | chr2_1:75573988-75574007 | Msa0225420:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 75573232 | 75574330 | 75573232 | ID=Msa0225420;Name=Msa0225420 |
| chr2_1 | mRNA | 75573232 | 75574330 | 75573232 | ID=Msa0225420-mRNA-1;Parent=Msa0225420;Name=Msa0225420-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|1|1|2|0|290 |
| chr2_1 | exon | 75573232 | 75573508 | 75573232 | ID=Msa0225420-mRNA-1:exon:22599;Parent=Msa0225420-mRNA-1 |
| chr2_1 | exon | 75573735 | 75574330 | 75573735 | ID=Msa0225420-mRNA-1:exon:22600;Parent=Msa0225420-mRNA-1 |
| chr2_1 | CDS | 75573232 | 75573508 | 75573232 | ID=Msa0225420-mRNA-1:cds;Parent=Msa0225420-mRNA-1 |
| chr2_1 | CDS | 75573735 | 75574330 | 75573735 | ID=Msa0225420-mRNA-1:cds;Parent=Msa0225420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
