Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225720 | XP_003597790.2 | 93.699 | 365 | 22 | 1 | 1 | 365 | 1 | 364 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225720 | sp|Q9M8L2|FBK30_ARATH | 47.581 | 372 | 170 | 7 | 1 | 365 | 1 | 354 | 1.14e-117 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225720 | G7II60 | 93.699 | 365 | 22 | 1 | 1 | 365 | 1 | 364 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0225420 | Msa0225720 | 0.970378 | 1.587369e-131 | -8.615850e-47 |
| Msa0225720 | Msa0256570 | 0.815544 | 8.756625e-52 | -8.615850e-47 |
| Msa0225720 | Msa0295710 | 0.801268 | 9.756425e-49 | -8.615850e-47 |
| Msa0225720 | Msa0334300 | 0.820973 | 5.166893e-53 | -8.615850e-47 |
| Msa0225720 | Msa0576560 | 0.819635 | 1.047459e-52 | -8.615850e-47 |
| Msa0225720 | Msa0686350 | -0.820845 | 5.530823e-53 | -8.615850e-47 |
| Msa0225720 | Msa0758750 | 0.801023 | 1.094755e-48 | -8.615850e-47 |
| Msa0225720 | Msa0783680 | 0.846417 | 2.200695e-59 | -8.615850e-47 |
| Msa0225720 | Msa0859120 | 0.816851 | 4.468173e-52 | -8.615850e-47 |
| Msa0225720 | Msa1038300 | 0.829064 | 6.343281e-55 | -8.615850e-47 |
| Msa0225720 | Msa1269440 | 0.944676 | 1.258168e-103 | -8.615850e-47 |
| Msa0225720 | Msa1335090 | 0.801777 | 7.672492e-49 | -8.615850e-47 |
| Msa0225720 | Msa1339930 | -0.804112 | 2.526077e-49 | -8.615850e-47 |
| Msa0225720 | Msa1422380 | 0.952956 | 7.889199e-111 | -8.615850e-47 |
| Msa0225720 | Msa1449580 | 0.828127 | 1.068378e-54 | -8.615850e-47 |
| Msa0225720 | Msa1452070 | -0.814653 | 1.380504e-51 | -8.615850e-47 |
| Msa0225720 | Msa1456490 | 0.837194 | 6.001829e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225720 | MtrunA17_Chr2g0332031 | 93.699 | 365 | 22 | 1 | 1 | 365 | 1 | 364 | 0.0 | 706 |
| Msa0225720 | MtrunA17_Chr4g0004201 | 59.726 | 365 | 140 | 3 | 1 | 365 | 3 | 360 | 7.48e-158 | 447 |
| Msa0225720 | MtrunA17_Chr2g0332021 | 88.189 | 127 | 15 | 0 | 172 | 298 | 1 | 127 | 3.00e-78 | 236 |
| Msa0225720 | MtrunA17_Chr8g0378571 | 36.216 | 370 | 198 | 11 | 1 | 365 | 5 | 341 | 7.05e-59 | 194 |
| Msa0225720 | MtrunA17_Chr7g0260051 | 26.766 | 269 | 157 | 9 | 2 | 262 | 3 | 239 | 2.00e-18 | 85.5 |
| Msa0225720 | MtrunA17_Chr8g0378511 | 26.974 | 304 | 178 | 11 | 3 | 298 | 77 | 344 | 1.07e-16 | 80.9 |
| Msa0225720 | MtrunA17_Chr4g0011151 | 24.621 | 264 | 156 | 8 | 3 | 261 | 102 | 327 | 2.33e-13 | 70.9 |
| Msa0225720 | MtrunA17_Chr4g0011221 | 26.538 | 260 | 156 | 9 | 3 | 261 | 102 | 327 | 5.16e-13 | 70.1 |
| Msa0225720 | MtrunA17_Chr4g0011171 | 26.154 | 260 | 157 | 9 | 3 | 261 | 102 | 327 | 1.06e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225720 | AT1G80440.1 | 47.581 | 372 | 170 | 7 | 1 | 365 | 1 | 354 | 1.16e-118 | 348 |
| Msa0225720 | AT1G15670.1 | 48.370 | 368 | 178 | 6 | 1 | 365 | 1 | 359 | 4.78e-117 | 344 |
| Msa0225720 | AT2G44130.1 | 33.562 | 292 | 156 | 7 | 2 | 269 | 18 | 295 | 3.81e-41 | 149 |
| Msa0225720 | AT3G59940.1 | 29.104 | 402 | 228 | 11 | 2 | 354 | 14 | 407 | 6.90e-40 | 146 |
| Msa0225720 | AT3G63220.1 | 24.925 | 333 | 197 | 10 | 3 | 324 | 4 | 294 | 9.78e-17 | 80.9 |
| Msa0225720 | AT3G63220.3 | 24.925 | 333 | 197 | 10 | 3 | 324 | 11 | 301 | 1.01e-16 | 80.9 |
| Msa0225720 | AT3G63220.2 | 24.925 | 333 | 197 | 10 | 3 | 324 | 11 | 301 | 1.01e-16 | 80.9 |
| Msa0225720 | AT1G26930.1 | 24.324 | 259 | 162 | 5 | 3 | 259 | 71 | 297 | 3.07e-15 | 77.0 |
| Msa0225720 | AT2G02870.2 | 25.000 | 276 | 168 | 9 | 3 | 277 | 117 | 354 | 7.67e-15 | 75.9 |
| Msa0225720 | AT2G02870.3 | 25.000 | 276 | 168 | 9 | 3 | 277 | 117 | 354 | 7.67e-15 | 75.9 |
| Msa0225720 | AT2G02870.1 | 25.000 | 276 | 168 | 9 | 3 | 277 | 117 | 354 | 7.67e-15 | 75.9 |
| Msa0225720 | AT1G14330.1 | 27.308 | 260 | 151 | 10 | 3 | 259 | 94 | 318 | 9.94e-14 | 72.4 |
| Msa0225720 | AT1G67480.3 | 29.437 | 231 | 136 | 7 | 3 | 231 | 39 | 244 | 1.21e-12 | 68.9 |
| Msa0225720 | AT1G67480.1 | 29.437 | 231 | 136 | 7 | 3 | 231 | 39 | 244 | 1.21e-12 | 68.9 |
| Msa0225720 | AT1G67480.2 | 29.437 | 231 | 136 | 7 | 3 | 231 | 39 | 244 | 1.21e-12 | 68.9 |
Find 126 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACATTTAGTTTATAAAT+TGG | 0.179879 | 2_1:+75849934 | None:intergenic |
| GCTACTATGGAGTTGATTTC+AGG | 0.182172 | 2_1:-75850180 | None:intergenic |
| GGGTAACCCTTCACTTAATT+CGG | 0.272688 | 2_1:+75849870 | None:intergenic |
| TGGAAACTGAAACAGGTATT+TGG | 0.276490 | 2_1:-75849912 | Msa0225720:CDS |
| TGGATTGGGTCTAGTGGGTT+TGG | 0.289853 | 2_1:-75849211 | Msa0225720:CDS |
| TTTGAAGCTTTCCATGAATC+AGG | 0.295391 | 2_1:+75849790 | None:intergenic |
| AGTTTCATACCAGGAATTTC+CGG | 0.301498 | 2_1:-75850121 | Msa0225720:CDS |
| TGGGTTTGGAGAACCTTATA+TGG | 0.316034 | 2_1:-75849197 | Msa0225720:CDS |
| CACTCTCGTGCTATGTCTTC+TGG | 0.327599 | 2_1:+75850153 | None:intergenic |
| TCACGCTCCCTCGCCATATC+AGG | 0.331031 | 2_1:+75849568 | None:intergenic |
| TACTCCAAACACCATTCTTC+AGG | 0.353583 | 2_1:+75849161 | None:intergenic |
| TCCAACACAAAGCCCATATA+AGG | 0.360295 | 2_1:+75849184 | None:intergenic |
| AGGGTATGATCTAGTTGTTA+TGG | 0.362184 | 2_1:-75849824 | Msa0225720:CDS |
| CTTGGGCAGATGCATTGTTA+TGG | 0.371889 | 2_1:-75849231 | Msa0225720:CDS |
| TGGCTACCGCCGGAAATTCC+TGG | 0.381513 | 2_1:+75850112 | None:intergenic |
| ATACATTTAGTTTATAAATT+GGG | 0.382336 | 2_1:+75849935 | None:intergenic |
| AATTTATAAACTAAATGTAT+TGG | 0.385908 | 2_1:-75849932 | Msa0225720:CDS |
| TATCTGCTACGTGGCGTCGC+GGG | 0.388214 | 2_1:-75849741 | Msa0225720:CDS |
| CGCCGGAGTTTCGCCGTGTC+CGG | 0.389061 | 2_1:-75850056 | Msa0225720:CDS |
| AGACATAGCACGAGAGTGTT+TGG | 0.398695 | 2_1:-75850148 | Msa0225720:CDS |
| TTCACCGGCCACGTTCAATC+TGG | 0.407052 | 2_1:-75849118 | Msa0225720:CDS |
| TGTTGCTTGTGTGGGAGCTT+GGG | 0.410270 | 2_1:-75849248 | Msa0225720:CDS |
| GGGTATGATCTAGTTGTTAT+GGG | 0.418612 | 2_1:-75849823 | Msa0225720:CDS |
| GTGGATCCCGCTTCCTGATA+TGG | 0.419518 | 2_1:-75849581 | Msa0225720:CDS |
| GTGGAGGTGGGGTCCGGTCG+AGG | 0.421615 | 2_1:-75849422 | Msa0225720:CDS |
| GAGAAGAATGTACATGTGTA+AGG | 0.422768 | 2_1:-75849341 | Msa0225720:CDS |
| TCGATGTAGCCACGTGGAGG+TGG | 0.423970 | 2_1:-75849435 | Msa0225720:CDS |
| GGTAACCCTTCACTTAATTC+GGG | 0.425963 | 2_1:+75849871 | None:intergenic |
| AGGTGGTGGCGAAGGTGCCT+AGG | 0.429241 | 2_1:-75849282 | Msa0225720:CDS |
| GAGGATGGGACCCTGATTCA+TGG | 0.430085 | 2_1:-75849801 | Msa0225720:CDS |
| GATGATGTGGTGGCATTGGA+TGG | 0.436126 | 2_1:-75849316 | Msa0225720:CDS |
| TTGTGTGGATGGTTGTGAAT+TGG | 0.440798 | 2_1:-75849365 | Msa0225720:CDS |
| CAGATGCATTGTTATGGATT+GGG | 0.443791 | 2_1:-75849225 | Msa0225720:CDS |
| TTCATGGAAAGCTTCAAATT+CGG | 0.444403 | 2_1:-75849785 | Msa0225720:CDS |
| ACCTTATATGGGCTTTGTGT+TGG | 0.447831 | 2_1:-75849185 | Msa0225720:CDS |
| GCAGATGCATTGTTATGGAT+TGG | 0.454389 | 2_1:-75849226 | Msa0225720:CDS |
| AATGTATTGGAAACTGAAAC+AGG | 0.458468 | 2_1:-75849919 | Msa0225720:CDS |
| ATGTTGCTTGTGTGGGAGCT+TGG | 0.459885 | 2_1:-75849249 | Msa0225720:CDS |
| GCAGGGCCCACCAGGCATAT+CGG | 0.462663 | 2_1:+75849717 | None:intergenic |
| GGGTTTGGAGAACCTTATAT+GGG | 0.462959 | 2_1:-75849196 | Msa0225720:CDS |
| CGCCGTGTCCGGAGGAGTAC+AGG | 0.466611 | 2_1:-75850045 | Msa0225720:CDS |
| CGTCGCGGGGCCGATATGCC+TGG | 0.468580 | 2_1:-75849727 | Msa0225720:CDS |
| CAACCATCCACACAAGTCCT+TGG | 0.468884 | 2_1:+75849373 | None:intergenic |
| TGTTATGGATTGGGTCTAGT+GGG | 0.471404 | 2_1:-75849216 | Msa0225720:CDS |
| TGGACCTGAAGAATGGTGTT+TGG | 0.471703 | 2_1:-75849165 | Msa0225720:CDS |
| GGGTGATGATGTGGTGGCAT+TGG | 0.471752 | 2_1:-75849320 | Msa0225720:CDS |
| CGTGCCAGAGCCATTGTCTC+CGG | 0.476636 | 2_1:+75849522 | None:intergenic |
| CGATGTAGCCACGTGGAGGT+GGG | 0.477914 | 2_1:-75849434 | Msa0225720:CDS |
| AGCCACGTGGAGGTGGGGTC+CGG | 0.487081 | 2_1:-75849428 | Msa0225720:CDS |
| ATCTAGTTGTTATGGGAGGA+TGG | 0.491431 | 2_1:-75849816 | Msa0225720:CDS |
| TGTAGCTTTAGCCAATAAAC+CGG | 0.493397 | 2_1:+75849963 | None:intergenic |
| TTGCTCACGGTGGCTACCGC+CGG | 0.494147 | 2_1:+75850102 | None:intergenic |
| TTTGTCAAATTGCGGGTGTA+GGG | 0.495373 | 2_1:-75849843 | Msa0225720:CDS |
| CGAAGGTGCCTAGGGAGATA+AGG | 0.500530 | 2_1:-75849273 | Msa0225720:CDS |
| TGCATCAGATCATGAAAGAA+TGG | 0.501033 | 2_1:-75849680 | Msa0225720:CDS |
| TTTGTGTTGGACCTGAAGAA+TGG | 0.506335 | 2_1:-75849172 | Msa0225720:CDS |
| TGTTTGCCACCCTTTGCTCA+CGG | 0.517498 | 2_1:+75850089 | None:intergenic |
| GGTGGTGGCGAAGGTGCCTA+GGG | 0.518802 | 2_1:-75849281 | Msa0225720:CDS |
| GAAAGAATGGTCTATGTGGC+AGG | 0.519321 | 2_1:-75849667 | Msa0225720:CDS |
| CGGTAGCCACCGTGAGCAAA+GGG | 0.527349 | 2_1:-75850098 | Msa0225720:CDS |
| TCACTTAATTCGGGTCCCAT+TGG | 0.529560 | 2_1:+75849880 | None:intergenic |
| CCCTCGCCATATCAGGAAGC+GGG | 0.530716 | 2_1:+75849575 | None:intergenic |
| TGTGCCGGAGACAATGGCTC+TGG | 0.531010 | 2_1:-75849526 | Msa0225720:CDS |
| GCGGTAGCCACCGTGAGCAA+AGG | 0.533392 | 2_1:-75850099 | Msa0225720:CDS |
| ATCTGCTACGTGGCGTCGCG+GGG | 0.536885 | 2_1:-75849740 | Msa0225720:CDS |
| TATTTGGAGCGAGTTGCCAA+TGG | 0.538824 | 2_1:-75849896 | Msa0225720:CDS |
| TTGTTATGGATTGGGTCTAG+TGG | 0.542297 | 2_1:-75849217 | Msa0225720:CDS |
| TGGTGACACGTGGAAGGTGG+TGG | 0.543700 | 2_1:-75849296 | Msa0225720:CDS |
| GGCACGATCAAAGTTGTTGG+TGG | 0.544929 | 2_1:-75849505 | Msa0225720:CDS |
| ACCCGCAATTTGACAAAACA+AGG | 0.548302 | 2_1:+75849849 | None:intergenic |
| ATTTGGAGCGAGTTGCCAAT+GGG | 0.548329 | 2_1:-75849895 | Msa0225720:CDS |
| GCAACCAGATTGAACGTGGC+CGG | 0.553033 | 2_1:+75849114 | None:intergenic |
| TCCCTCGCCATATCAGGAAG+CGG | 0.557334 | 2_1:+75849574 | None:intergenic |
| CGGAGTTTCGCCGTGTCCGG+AGG | 0.560636 | 2_1:-75850053 | Msa0225720:CDS |
| CACGTGGAAGGTGGTGGCGA+AGG | 0.560862 | 2_1:-75849290 | Msa0225720:CDS |
| GAGCATGACCTGTACTCCTC+CGG | 0.561000 | 2_1:+75850037 | None:intergenic |
| TCCCGCTTCCTGATATGGCG+AGG | 0.561759 | 2_1:-75849576 | Msa0225720:CDS |
| TTGAAGCTTTCCATGAATCA+GGG | 0.562384 | 2_1:+75849791 | None:intergenic |
| GATAAGGAATGTTGCTTGTG+TGG | 0.563323 | 2_1:-75849257 | Msa0225720:CDS |
| CTCCGGACACGGCGAAACTC+CGG | 0.563978 | 2_1:+75850054 | None:intergenic |
| TCTGGCACGATCAAAGTTGT+TGG | 0.564275 | 2_1:-75849508 | Msa0225720:CDS |
| CGCGGGGCCGATATGCCTGG+TGG | 0.565185 | 2_1:-75849724 | Msa0225720:CDS |
| ATTTGGACTGAACCGTGACT+AGG | 0.569932 | 2_1:+75850007 | None:intergenic |
| TGGATGATGCCACATGTCCA+AGG | 0.571672 | 2_1:-75849390 | Msa0225720:CDS |
| GATGTAGCCACGTGGAGGTG+GGG | 0.572404 | 2_1:-75849433 | Msa0225720:CDS |
| AGAAGAATGTACATGTGTAA+GGG | 0.581931 | 2_1:-75849340 | Msa0225720:CDS |
| TCTAGTTGTTATGGGAGGAT+GGG | 0.587902 | 2_1:-75849815 | Msa0225720:CDS |
| GCAACATTCCTTATCTCCCT+AGG | 0.592170 | 2_1:+75849265 | None:intergenic |
| CACACAAGTCCTTGGACATG+TGG | 0.595115 | 2_1:+75849381 | None:intergenic |
| GGATATCGTACGGAGATGCA+AGG | 0.595851 | 2_1:-75849484 | Msa0225720:CDS |
| TTATCTGCTACGTGGCGTCG+CGG | 0.598695 | 2_1:-75849742 | Msa0225720:CDS |
| AGTTGTTGGTGGATATCGTA+CGG | 0.598708 | 2_1:-75849494 | Msa0225720:CDS |
| TGCTCAGAAAATCCTAGTCA+CGG | 0.599471 | 2_1:-75850019 | Msa0225720:CDS |
| CCCGCTTCCTGATATGGCGA+GGG | 0.599930 | 2_1:-75849575 | Msa0225720:CDS |
| TGTCCAAGGACTTGTGTGGA+TGG | 0.600952 | 2_1:-75849376 | Msa0225720:CDS |
| GAAAACCCAGAAAATTTCAC+CGG | 0.601148 | 2_1:-75849133 | Msa0225720:CDS |
| GCGGGGCCGATATGCCTGGT+GGG | 0.609835 | 2_1:-75849723 | Msa0225720:CDS |
| GACCTGTACTCCTCCGGACA+CGG | 0.612366 | 2_1:+75850043 | None:intergenic |
| ATTGGATGGTGACACGTGGA+AGG | 0.617577 | 2_1:-75849302 | Msa0225720:CDS |
| GAGGTGGGGTCCGGTCGAGG+AGG | 0.618236 | 2_1:-75849419 | Msa0225720:CDS |
| ATAAGGAATGTTGCTTGTGT+GGG | 0.622737 | 2_1:-75849256 | Msa0225720:CDS |
| ATGGGACCCGAATTAAGTGA+AGG | 0.624099 | 2_1:-75849877 | Msa0225720:CDS |
| TCATGAAAGAATGGTCTATG+TGG | 0.631561 | 2_1:-75849671 | Msa0225720:CDS |
| GGATGGTGACACGTGGAAGG+TGG | 0.634958 | 2_1:-75849299 | Msa0225720:CDS |
| TATGATCTAGTTGTTATGGG+AGG | 0.636400 | 2_1:-75849820 | Msa0225720:CDS |
| GCAAACAGAGATTCAAACGC+CGG | 0.637123 | 2_1:-75850073 | Msa0225720:CDS |
| GATATCGTACGGAGATGCAA+GGG | 0.639764 | 2_1:-75849483 | Msa0225720:CDS |
| TGGGACCCGAATTAAGTGAA+GGG | 0.640598 | 2_1:-75849876 | Msa0225720:CDS |
| CATGTGTAAGGGTGATGATG+TGG | 0.641473 | 2_1:-75849329 | Msa0225720:CDS |
| GTCAGCATTTGCTTACGATG+TGG | 0.642705 | 2_1:-75849614 | Msa0225720:CDS |
| TAGCCACCGTGAGCAAAGGG+TGG | 0.650702 | 2_1:-75850095 | Msa0225720:CDS |
| TTTGGTTCGAGTTTCATACC+AGG | 0.651758 | 2_1:-75850130 | Msa0225720:CDS |
| GACCGGACCCCACCTCCACG+TGG | 0.662176 | 2_1:+75849426 | None:intergenic |
| GCGATTCGAACGTAGTGCTG+AGG | 0.664187 | 2_1:-75849461 | Msa0225720:CDS |
| ACGATGTGGCAAATGATGTG+TGG | 0.666045 | 2_1:-75849600 | Msa0225720:CDS |
| AAAAGCAACCAGATTGAACG+TGG | 0.667532 | 2_1:+75849110 | None:intergenic |
| GTGTAAGGGTGATGATGTGG+TGG | 0.677538 | 2_1:-75849326 | Msa0225720:CDS |
| AGAATGGTCTATGTGGCAGG+AGG | 0.679340 | 2_1:-75849664 | Msa0225720:CDS |
| CCCGCAATTTGACAAAACAA+GGG | 0.679482 | 2_1:+75849850 | None:intergenic |
| TTGCCACCCTTTGCTCACGG+TGG | 0.683953 | 2_1:+75850092 | None:intergenic |
| AGTTCGATGTAGCCACGTGG+AGG | 0.685810 | 2_1:-75849438 | Msa0225720:CDS |
| TTCATACCAGGAATTTCCGG+CGG | 0.694230 | 2_1:-75850118 | Msa0225720:CDS |
| TGGCATTGGATGGTGACACG+TGG | 0.697013 | 2_1:-75849306 | Msa0225720:CDS |
| TGTGGCAGGAGGACATGACG+AGG | 0.708701 | 2_1:-75849653 | Msa0225720:CDS |
| AGGAGTTCGATGTAGCCACG+TGG | 0.736829 | 2_1:-75849441 | Msa0225720:CDS |
| CACATGTCCAAGGACTTGTG+TGG | 0.739846 | 2_1:-75849380 | Msa0225720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACATTTAGTTTATAAATT+GGG | + | chr2_1:75849341-75849360 | None:intergenic | 10.0% |
| !!! | AATACATTTAGTTTATAAAT+TGG | + | chr2_1:75849342-75849361 | None:intergenic | 10.0% |
| !! | AATTTATAAACTAAATGTAT+TGG | - | chr2_1:75849341-75849360 | Msa0225720:CDS | 10.0% |
| !!! | ATACATTTAGTTTATAAATT+GGG | + | chr2_1:75849341-75849360 | None:intergenic | 10.0% |
| !!! | AATACATTTAGTTTATAAAT+TGG | + | chr2_1:75849342-75849361 | None:intergenic | 10.0% |
| !! | AATTTATAAACTAAATGTAT+TGG | - | chr2_1:75849341-75849360 | Msa0225720:CDS | 10.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | + | chr2_1:75849286-75849305 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | - | chr2_1:75849523-75849542 | Msa0225720:CDS | 25.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | + | chr2_1:75849286-75849305 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | - | chr2_1:75849523-75849542 | Msa0225720:CDS | 25.0% |
| GATTCAGAAAAAAGCAAAAC+CGG | - | chr2_1:75849291-75849310 | Msa0225720:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | - | chr2_1:75849299-75849318 | Msa0225720:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | - | chr2_1:75849354-75849373 | Msa0225720:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | - | chr2_1:75849488-75849507 | Msa0225720:CDS | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | - | chr2_1:75849933-75849952 | Msa0225720:CDS | 30.0% | |
| GATTCAGAAAAAAGCAAAAC+CGG | - | chr2_1:75849291-75849310 | Msa0225720:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | - | chr2_1:75849299-75849318 | Msa0225720:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | - | chr2_1:75849354-75849373 | Msa0225720:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | - | chr2_1:75849488-75849507 | Msa0225720:CDS | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | - | chr2_1:75849933-75849952 | Msa0225720:CDS | 30.0% | |
| AGTTTCATACCAGGAATTTC+CGG | - | chr2_1:75849152-75849171 | Msa0225720:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | + | chr2_1:75849313-75849332 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | - | chr2_1:75849361-75849380 | Msa0225720:CDS | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | - | chr2_1:75849422-75849441 | Msa0225720:CDS | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | - | chr2_1:75849449-75849468 | Msa0225720:CDS | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | - | chr2_1:75849450-75849469 | Msa0225720:CDS | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | - | chr2_1:75849453-75849472 | Msa0225720:CDS | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | + | chr2_1:75849485-75849504 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | + | chr2_1:75849486-75849505 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | - | chr2_1:75849593-75849612 | Msa0225720:CDS | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | - | chr2_1:75849602-75849621 | Msa0225720:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | - | chr2_1:75849732-75849751 | Msa0225720:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | - | chr2_1:75849932-75849951 | Msa0225720:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | - | chr2_1:75850017-75850036 | Msa0225720:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | - | chr2_1:75850048-75850067 | Msa0225720:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | - | chr2_1:75850140-75850159 | Msa0225720:CDS | 35.0% | |
| AGTTTCATACCAGGAATTTC+CGG | - | chr2_1:75849152-75849171 | Msa0225720:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | + | chr2_1:75849313-75849332 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | - | chr2_1:75849361-75849380 | Msa0225720:CDS | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | - | chr2_1:75849422-75849441 | Msa0225720:CDS | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | - | chr2_1:75849449-75849468 | Msa0225720:CDS | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | - | chr2_1:75849450-75849469 | Msa0225720:CDS | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | - | chr2_1:75849453-75849472 | Msa0225720:CDS | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | + | chr2_1:75849485-75849504 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | + | chr2_1:75849486-75849505 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | - | chr2_1:75849593-75849612 | Msa0225720:CDS | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | - | chr2_1:75849602-75849621 | Msa0225720:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | - | chr2_1:75849732-75849751 | Msa0225720:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | - | chr2_1:75849932-75849951 | Msa0225720:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | - | chr2_1:75850017-75850036 | Msa0225720:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | - | chr2_1:75850048-75850067 | Msa0225720:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | - | chr2_1:75850140-75850159 | Msa0225720:CDS | 35.0% | |
| ! | TTTGGTTCGAGTTTCATACC+AGG | - | chr2_1:75849143-75849162 | Msa0225720:CDS | 40.0% |
| TGCTCAGAAAATCCTAGTCA+CGG | - | chr2_1:75849254-75849273 | Msa0225720:CDS | 40.0% | |
| GGTAACCCTTCACTTAATTC+GGG | + | chr2_1:75849405-75849424 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | + | chr2_1:75849406-75849425 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | + | chr2_1:75849426-75849445 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | - | chr2_1:75849423-75849442 | Msa0225720:CDS | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | + | chr2_1:75849427-75849446 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | - | chr2_1:75849429-75849448 | Msa0225720:CDS | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | - | chr2_1:75849430-75849449 | Msa0225720:CDS | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | - | chr2_1:75849457-75849476 | Msa0225720:CDS | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | - | chr2_1:75849458-75849477 | Msa0225720:CDS | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | + | chr2_1:75849576-75849595 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | + | chr2_1:75849577-75849596 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGTGGATATCGTA+CGG | - | chr2_1:75849779-75849798 | Msa0225720:CDS | 40.0% |
| TTGTGTGGATGGTTGTGAAT+TGG | - | chr2_1:75849908-75849927 | Msa0225720:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | - | chr2_1:75850016-75850035 | Msa0225720:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | - | chr2_1:75850047-75850066 | Msa0225720:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | - | chr2_1:75850056-75850075 | Msa0225720:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | - | chr2_1:75850057-75850076 | Msa0225720:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | - | chr2_1:75850076-75850095 | Msa0225720:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | - | chr2_1:75850077-75850096 | Msa0225720:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | - | chr2_1:75850088-75850107 | Msa0225720:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | + | chr2_1:75850092-75850111 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | - | chr2_1:75850101-75850120 | Msa0225720:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | + | chr2_1:75850115-75850134 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | + | chr2_1:75850166-75850185 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | - | chr2_1:75850166-75850185 | Msa0225720:CDS | 40.0% |
| ! | TTTGGTTCGAGTTTCATACC+AGG | - | chr2_1:75849143-75849162 | Msa0225720:CDS | 40.0% |
| TGCTCAGAAAATCCTAGTCA+CGG | - | chr2_1:75849254-75849273 | Msa0225720:CDS | 40.0% | |
| GGTAACCCTTCACTTAATTC+GGG | + | chr2_1:75849405-75849424 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | + | chr2_1:75849406-75849425 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | + | chr2_1:75849426-75849445 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | - | chr2_1:75849423-75849442 | Msa0225720:CDS | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | + | chr2_1:75849427-75849446 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | - | chr2_1:75849429-75849448 | Msa0225720:CDS | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | - | chr2_1:75849430-75849449 | Msa0225720:CDS | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | - | chr2_1:75849457-75849476 | Msa0225720:CDS | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | - | chr2_1:75849458-75849477 | Msa0225720:CDS | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | + | chr2_1:75849576-75849595 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | + | chr2_1:75849577-75849596 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGTGGATATCGTA+CGG | - | chr2_1:75849779-75849798 | Msa0225720:CDS | 40.0% |
| TTGTGTGGATGGTTGTGAAT+TGG | - | chr2_1:75849908-75849927 | Msa0225720:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | - | chr2_1:75850016-75850035 | Msa0225720:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | - | chr2_1:75850047-75850066 | Msa0225720:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | - | chr2_1:75850056-75850075 | Msa0225720:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | - | chr2_1:75850057-75850076 | Msa0225720:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | - | chr2_1:75850076-75850095 | Msa0225720:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | - | chr2_1:75850077-75850096 | Msa0225720:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | - | chr2_1:75850088-75850107 | Msa0225720:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | + | chr2_1:75850092-75850111 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | - | chr2_1:75850101-75850120 | Msa0225720:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | + | chr2_1:75850115-75850134 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | + | chr2_1:75850166-75850185 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | - | chr2_1:75850166-75850185 | Msa0225720:CDS | 40.0% |
| !! | AGACATAGCACGAGAGTGTT+TGG | - | chr2_1:75849125-75849144 | Msa0225720:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | - | chr2_1:75849155-75849174 | Msa0225720:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | - | chr2_1:75849200-75849219 | Msa0225720:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | + | chr2_1:75849269-75849288 | None:intergenic | 45.0% | |
| ! | TATTTGGAGCGAGTTGCCAA+TGG | - | chr2_1:75849377-75849396 | Msa0225720:CDS | 45.0% |
| ! | ATTTGGAGCGAGTTGCCAAT+GGG | - | chr2_1:75849378-75849397 | Msa0225720:CDS | 45.0% |
| TCACTTAATTCGGGTCCCAT+TGG | + | chr2_1:75849396-75849415 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | - | chr2_1:75849396-75849415 | Msa0225720:CDS | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | - | chr2_1:75849397-75849416 | Msa0225720:CDS | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | - | chr2_1:75849606-75849625 | Msa0225720:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | - | chr2_1:75849659-75849678 | Msa0225720:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | - | chr2_1:75849673-75849692 | Msa0225720:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | - | chr2_1:75849765-75849784 | Msa0225720:CDS | 45.0% | |
| GATATCGTACGGAGATGCAA+GGG | - | chr2_1:75849790-75849809 | Msa0225720:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | - | chr2_1:75849944-75849963 | Msa0225720:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | + | chr2_1:75850011-75850030 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | - | chr2_1:75850042-75850061 | Msa0225720:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | - | chr2_1:75850108-75850127 | Msa0225720:CDS | 45.0% | |
| !! | AGACATAGCACGAGAGTGTT+TGG | - | chr2_1:75849125-75849144 | Msa0225720:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | - | chr2_1:75849155-75849174 | Msa0225720:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | - | chr2_1:75849200-75849219 | Msa0225720:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | + | chr2_1:75849269-75849288 | None:intergenic | 45.0% | |
| ! | TATTTGGAGCGAGTTGCCAA+TGG | - | chr2_1:75849377-75849396 | Msa0225720:CDS | 45.0% |
| ! | ATTTGGAGCGAGTTGCCAAT+GGG | - | chr2_1:75849378-75849397 | Msa0225720:CDS | 45.0% |
| TCACTTAATTCGGGTCCCAT+TGG | + | chr2_1:75849396-75849415 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | - | chr2_1:75849396-75849415 | Msa0225720:CDS | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | - | chr2_1:75849397-75849416 | Msa0225720:CDS | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | - | chr2_1:75849606-75849625 | Msa0225720:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | - | chr2_1:75849659-75849678 | Msa0225720:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | - | chr2_1:75849673-75849692 | Msa0225720:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | - | chr2_1:75849765-75849784 | Msa0225720:CDS | 45.0% | |
| GATATCGTACGGAGATGCAA+GGG | - | chr2_1:75849790-75849809 | Msa0225720:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | - | chr2_1:75849944-75849963 | Msa0225720:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | + | chr2_1:75850011-75850030 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | - | chr2_1:75850042-75850061 | Msa0225720:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | - | chr2_1:75850108-75850127 | Msa0225720:CDS | 45.0% | |
| CACTCTCGTGCTATGTCTTC+TGG | + | chr2_1:75849123-75849142 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | + | chr2_1:75849187-75849206 | None:intergenic | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | - | chr2_1:75849609-75849628 | Msa0225720:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | - | chr2_1:75849741-75849760 | Msa0225720:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | - | chr2_1:75849768-75849787 | Msa0225720:CDS | 50.0% | |
| GGATATCGTACGGAGATGCA+AGG | - | chr2_1:75849789-75849808 | Msa0225720:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | + | chr2_1:75849867-75849886 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | - | chr2_1:75849883-75849902 | Msa0225720:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | + | chr2_1:75849895-75849914 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | - | chr2_1:75849893-75849912 | Msa0225720:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | - | chr2_1:75849897-75849916 | Msa0225720:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | + | chr2_1:75849903-75849922 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | - | chr2_1:75849947-75849966 | Msa0225720:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | - | chr2_1:75849957-75849976 | Msa0225720:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | - | chr2_1:75849971-75849990 | Msa0225720:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | - | chr2_1:75850024-75850043 | Msa0225720:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | - | chr2_1:75850025-75850044 | Msa0225720:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | - | chr2_1:75850062-75850081 | Msa0225720:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | + | chr2_1:75850148-75850167 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | + | chr2_1:75850149-75850168 | None:intergenic | 50.0% |
| CACTCTCGTGCTATGTCTTC+TGG | + | chr2_1:75849123-75849142 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | + | chr2_1:75849187-75849206 | None:intergenic | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | - | chr2_1:75849609-75849628 | Msa0225720:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | - | chr2_1:75849741-75849760 | Msa0225720:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | - | chr2_1:75849768-75849787 | Msa0225720:CDS | 50.0% | |
| GGATATCGTACGGAGATGCA+AGG | - | chr2_1:75849789-75849808 | Msa0225720:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | + | chr2_1:75849867-75849886 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | - | chr2_1:75849883-75849902 | Msa0225720:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | + | chr2_1:75849895-75849914 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | - | chr2_1:75849893-75849912 | Msa0225720:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | - | chr2_1:75849897-75849916 | Msa0225720:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | + | chr2_1:75849903-75849922 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | - | chr2_1:75849947-75849966 | Msa0225720:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | - | chr2_1:75849957-75849976 | Msa0225720:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | - | chr2_1:75849971-75849990 | Msa0225720:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | - | chr2_1:75850024-75850043 | Msa0225720:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | - | chr2_1:75850025-75850044 | Msa0225720:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | - | chr2_1:75850062-75850081 | Msa0225720:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | + | chr2_1:75850148-75850167 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | + | chr2_1:75850149-75850168 | None:intergenic | 50.0% |
| GAGCATGACCTGTACTCCTC+CGG | + | chr2_1:75849239-75849258 | None:intergenic | 55.0% | |
| GAGGATGGGACCCTGATTCA+TGG | - | chr2_1:75849472-75849491 | Msa0225720:CDS | 55.0% | |
| TTATCTGCTACGTGGCGTCG+CGG | - | chr2_1:75849531-75849550 | Msa0225720:CDS | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | + | chr2_1:75849567-75849586 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | - | chr2_1:75849692-75849711 | Msa0225720:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | + | chr2_1:75849702-75849721 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | - | chr2_1:75849812-75849831 | Msa0225720:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | - | chr2_1:75849832-75849851 | Msa0225720:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | - | chr2_1:75849835-75849854 | Msa0225720:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | - | chr2_1:75849863-75849882 | Msa0225720:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | - | chr2_1:75849953-75849972 | Msa0225720:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | - | chr2_1:75849967-75849986 | Msa0225720:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | - | chr2_1:75850000-75850019 | Msa0225720:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | - | chr2_1:75850155-75850174 | Msa0225720:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | + | chr2_1:75850162-75850181 | None:intergenic | 55.0% | |
| GAGCATGACCTGTACTCCTC+CGG | + | chr2_1:75849239-75849258 | None:intergenic | 55.0% | |
| GAGGATGGGACCCTGATTCA+TGG | - | chr2_1:75849472-75849491 | Msa0225720:CDS | 55.0% | |
| TTATCTGCTACGTGGCGTCG+CGG | - | chr2_1:75849531-75849550 | Msa0225720:CDS | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | + | chr2_1:75849567-75849586 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | - | chr2_1:75849692-75849711 | Msa0225720:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | + | chr2_1:75849702-75849721 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | - | chr2_1:75849812-75849831 | Msa0225720:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | - | chr2_1:75849832-75849851 | Msa0225720:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | - | chr2_1:75849835-75849854 | Msa0225720:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | - | chr2_1:75849863-75849882 | Msa0225720:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | - | chr2_1:75849953-75849972 | Msa0225720:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | - | chr2_1:75849967-75849986 | Msa0225720:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | - | chr2_1:75850000-75850019 | Msa0225720:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | - | chr2_1:75850155-75850174 | Msa0225720:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | + | chr2_1:75850162-75850181 | None:intergenic | 55.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | + | chr2_1:75849164-75849183 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | - | chr2_1:75849175-75849194 | Msa0225720:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | - | chr2_1:75849178-75849197 | Msa0225720:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | + | chr2_1:75849184-75849203 | None:intergenic | 60.0% | |
| GACCTGTACTCCTCCGGACA+CGG | + | chr2_1:75849233-75849252 | None:intergenic | 60.0% | |
| TATCTGCTACGTGGCGTCGC+GGG | - | chr2_1:75849532-75849551 | Msa0225720:CDS | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | - | chr2_1:75849620-75849639 | Msa0225720:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | - | chr2_1:75849697-75849716 | Msa0225720:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | + | chr2_1:75849701-75849720 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | - | chr2_1:75849698-75849717 | Msa0225720:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | + | chr2_1:75849708-75849727 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | - | chr2_1:75849747-75849766 | Msa0225720:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | + | chr2_1:75849754-75849773 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | - | chr2_1:75849838-75849857 | Msa0225720:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | - | chr2_1:75849839-75849858 | Msa0225720:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | - | chr2_1:75849840-75849859 | Msa0225720:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | - | chr2_1:75849974-75849993 | Msa0225720:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | - | chr2_1:75849977-75849996 | Msa0225720:CDS | 60.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | + | chr2_1:75849164-75849183 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | - | chr2_1:75849175-75849194 | Msa0225720:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | - | chr2_1:75849178-75849197 | Msa0225720:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | + | chr2_1:75849184-75849203 | None:intergenic | 60.0% | |
| GACCTGTACTCCTCCGGACA+CGG | + | chr2_1:75849233-75849252 | None:intergenic | 60.0% | |
| TATCTGCTACGTGGCGTCGC+GGG | - | chr2_1:75849532-75849551 | Msa0225720:CDS | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | - | chr2_1:75849620-75849639 | Msa0225720:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | - | chr2_1:75849697-75849716 | Msa0225720:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | + | chr2_1:75849701-75849720 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | - | chr2_1:75849698-75849717 | Msa0225720:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | + | chr2_1:75849708-75849727 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | - | chr2_1:75849747-75849766 | Msa0225720:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | + | chr2_1:75849754-75849773 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | - | chr2_1:75849838-75849857 | Msa0225720:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | - | chr2_1:75849839-75849858 | Msa0225720:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | - | chr2_1:75849840-75849859 | Msa0225720:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | - | chr2_1:75849974-75849993 | Msa0225720:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | - | chr2_1:75849977-75849996 | Msa0225720:CDS | 60.0% | |
| TTGCTCACGGTGGCTACCGC+CGG | + | chr2_1:75849174-75849193 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | - | chr2_1:75849174-75849193 | Msa0225720:CDS | 65.0% | |
| CTCCGGACACGGCGAAACTC+CGG | + | chr2_1:75849222-75849241 | None:intergenic | 65.0% | |
| ATCTGCTACGTGGCGTCGCG+GGG | - | chr2_1:75849533-75849552 | Msa0225720:CDS | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | + | chr2_1:75849559-75849578 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | - | chr2_1:75849983-75850002 | Msa0225720:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | - | chr2_1:75849991-75850010 | Msa0225720:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | - | chr2_1:75849992-75850011 | Msa0225720:CDS | 65.0% |
| TTGCTCACGGTGGCTACCGC+CGG | + | chr2_1:75849174-75849193 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | - | chr2_1:75849174-75849193 | Msa0225720:CDS | 65.0% | |
| CTCCGGACACGGCGAAACTC+CGG | + | chr2_1:75849222-75849241 | None:intergenic | 65.0% | |
| ATCTGCTACGTGGCGTCGCG+GGG | - | chr2_1:75849533-75849552 | Msa0225720:CDS | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | + | chr2_1:75849559-75849578 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | - | chr2_1:75849983-75850002 | Msa0225720:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | - | chr2_1:75849991-75850010 | Msa0225720:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | - | chr2_1:75849992-75850011 | Msa0225720:CDS | 65.0% |
| CGCCGGAGTTTCGCCGTGTC+CGG | - | chr2_1:75849217-75849236 | Msa0225720:CDS | 70.0% | |
| CGGAGTTTCGCCGTGTCCGG+AGG | - | chr2_1:75849220-75849239 | Msa0225720:CDS | 70.0% | |
| ! | CGCCGTGTCCGGAGGAGTAC+AGG | - | chr2_1:75849228-75849247 | Msa0225720:CDS | 70.0% |
| GCGGGGCCGATATGCCTGGT+GGG | - | chr2_1:75849550-75849569 | Msa0225720:CDS | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | - | chr2_1:75849845-75849864 | Msa0225720:CDS | 70.0% | |
| CGCCGGAGTTTCGCCGTGTC+CGG | - | chr2_1:75849217-75849236 | Msa0225720:CDS | 70.0% | |
| CGGAGTTTCGCCGTGTCCGG+AGG | - | chr2_1:75849220-75849239 | Msa0225720:CDS | 70.0% | |
| ! | CGCCGTGTCCGGAGGAGTAC+AGG | - | chr2_1:75849228-75849247 | Msa0225720:CDS | 70.0% |
| GCGGGGCCGATATGCCTGGT+GGG | - | chr2_1:75849550-75849569 | Msa0225720:CDS | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | - | chr2_1:75849845-75849864 | Msa0225720:CDS | 70.0% | |
| CGTCGCGGGGCCGATATGCC+TGG | - | chr2_1:75849546-75849565 | Msa0225720:CDS | 75.0% | |
| CGCGGGGCCGATATGCCTGG+TGG | - | chr2_1:75849549-75849568 | Msa0225720:CDS | 75.0% | |
| GACCGGACCCCACCTCCACG+TGG | + | chr2_1:75849850-75849869 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | - | chr2_1:75849851-75849870 | Msa0225720:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | - | chr2_1:75849854-75849873 | Msa0225720:CDS | 75.0% | |
| CGTCGCGGGGCCGATATGCC+TGG | - | chr2_1:75849546-75849565 | Msa0225720:CDS | 75.0% | |
| CGCGGGGCCGATATGCCTGG+TGG | - | chr2_1:75849549-75849568 | Msa0225720:CDS | 75.0% | |
| GACCGGACCCCACCTCCACG+TGG | + | chr2_1:75849850-75849869 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | - | chr2_1:75849851-75849870 | Msa0225720:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | - | chr2_1:75849854-75849873 | Msa0225720:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 75849099 | 75850196 | 75849099 | ID=Msa0225720;Name=Msa0225720 |
| chr2_1 | mRNA | 75849099 | 75850196 | 75849099 | ID=Msa0225720-mRNA-1;Parent=Msa0225720;Name=Msa0225720-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|365 |
| chr2_1 | exon | 75849099 | 75850196 | 75849099 | ID=Msa0225720-mRNA-1:exon:22828;Parent=Msa0225720-mRNA-1 |
| chr2_1 | CDS | 75849099 | 75850196 | 75849099 | ID=Msa0225720-mRNA-1:cds;Parent=Msa0225720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
