Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247400 | XP_024632581.1 | 98.337 | 902 | 14 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1861 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247400 | A0A396JB28 | 98.337 | 902 | 14 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1861 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028340 | Msa0247400 | 0.825811 | 3.824420e-54 | -8.615850e-47 |
| Msa0047640 | Msa0247400 | 0.810552 | 1.088861e-50 | -8.615850e-47 |
| Msa0076170 | Msa0247400 | 0.832276 | 1.037008e-55 | -8.615850e-47 |
| Msa0089980 | Msa0247400 | 0.834796 | 2.436575e-56 | -8.615850e-47 |
| Msa0090010 | Msa0247400 | 0.833054 | 6.647212e-56 | -8.615850e-47 |
| Msa0124200 | Msa0247400 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa0168570 | Msa0247400 | 0.837592 | 4.746866e-57 | -8.615850e-47 |
| Msa0171200 | Msa0247400 | 0.804326 | 2.279713e-49 | -8.615850e-47 |
| Msa0204250 | Msa0247400 | 0.906683 | 1.141595e-80 | -8.615850e-47 |
| Msa0247400 | Msa0324890 | 0.835230 | 1.893473e-56 | -8.615850e-47 |
| Msa0247400 | Msa0369420 | 0.801871 | 7.338405e-49 | -8.615850e-47 |
| Msa0247400 | Msa0379610 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
| Msa0247400 | Msa0382360 | 0.818228 | 2.187407e-52 | -8.615850e-47 |
| Msa0247400 | Msa0423840 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
| Msa0247400 | Msa0432170 | 0.813925 | 1.999378e-51 | -8.615850e-47 |
| Msa0247400 | Msa0450360 | 0.806887 | 6.612312e-50 | -8.615850e-47 |
| Msa0247400 | Msa0476690 | 0.845816 | 3.207234e-59 | -8.615850e-47 |
| Msa0247400 | Msa0544730 | 0.818563 | 1.836680e-52 | -8.615850e-47 |
| Msa0247400 | Msa0608270 | 0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0247400 | Msa0648830 | 0.822915 | 1.834316e-53 | -8.615850e-47 |
| Msa0247400 | Msa0651830 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0247400 | Msa0691340 | 0.805668 | 1.194331e-49 | -8.615850e-47 |
| Msa0247400 | Msa0969330 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0247400 | Msa0983770 | 0.803210 | 3.886648e-49 | -8.615850e-47 |
| Msa0247400 | Msa1143710 | 0.848198 | 7.142419e-60 | -8.615850e-47 |
| Msa0247400 | Msa1366550 | 0.819616 | 1.057981e-52 | -8.615850e-47 |
| Msa0247400 | Msa1369090 | 0.831795 | 1.363350e-55 | -8.615850e-47 |
| Msa0247400 | Msa1393820 | 0.824003 | 1.021040e-53 | -8.615850e-47 |
| Msa0247400 | Msa1431170 | 0.805112 | 1.562240e-49 | -8.615850e-47 |
| Msa0247400 | Msa1438520 | 0.809898 | 1.507268e-50 | -8.615850e-47 |
| Msa0247400 | Msa1463030 | 0.813515 | 2.462055e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247400 | MtrunA17_Chr2g0302451 | 98.337 | 902 | 14 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1861 |
| Msa0247400 | MtrunA17_Chr3g0112101 | 31.564 | 716 | 462 | 11 | 120 | 819 | 4 | 707 | 7.78e-111 | 358 |
| Msa0247400 | MtrunA17_Chr3g0126261 | 33.401 | 494 | 323 | 6 | 309 | 800 | 22 | 511 | 1.20e-89 | 296 |
| Msa0247400 | MtrunA17_Chr6g0455641 | 33.665 | 502 | 325 | 5 | 300 | 798 | 68 | 564 | 1.91e-86 | 289 |
| Msa0247400 | MtrunA17_Chr6g0454061 | 35.409 | 514 | 313 | 6 | 300 | 807 | 69 | 569 | 2.30e-86 | 289 |
| Msa0247400 | MtrunA17_Chr6g0454051 | 33.852 | 514 | 321 | 6 | 300 | 807 | 124 | 624 | 2.54e-81 | 276 |
| Msa0247400 | MtrunA17_Chr6g0454041 | 30.912 | 647 | 376 | 13 | 149 | 791 | 85 | 664 | 4.51e-78 | 269 |
| Msa0247400 | MtrunA17_Chr6g0476101 | 36.330 | 267 | 169 | 1 | 423 | 689 | 17 | 282 | 5.64e-54 | 189 |
| Msa0247400 | MtrunA17_Chr4g0010371 | 30.303 | 99 | 68 | 1 | 668 | 765 | 2 | 100 | 3.55e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247400 | AT3G17450.2 | 56.213 | 845 | 338 | 12 | 1 | 829 | 1 | 829 | 0.0 | 966 |
| Msa0247400 | AT3G17450.1 | 56.213 | 845 | 338 | 12 | 1 | 829 | 1 | 829 | 0.0 | 966 |
| Msa0247400 | AT4G15020.2 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 3.02e-105 | 343 |
| Msa0247400 | AT4G15020.1 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 3.02e-105 | 343 |
| Msa0247400 | AT3G22220.3 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.92e-103 | 338 |
| Msa0247400 | AT3G22220.4 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.92e-103 | 338 |
| Msa0247400 | AT3G22220.2 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.92e-103 | 338 |
| Msa0247400 | AT3G22220.1 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.92e-103 | 338 |
| Msa0247400 | AT1G79740.1 | 29.354 | 511 | 347 | 6 | 309 | 819 | 111 | 607 | 3.82e-76 | 262 |
| Msa0247400 | AT1G79740.4 | 29.354 | 511 | 347 | 6 | 309 | 819 | 111 | 607 | 3.82e-76 | 262 |
| Msa0247400 | AT1G79740.3 | 29.098 | 488 | 332 | 6 | 332 | 819 | 1 | 474 | 6.30e-73 | 249 |
| Msa0247400 | AT1G79740.2 | 29.098 | 488 | 332 | 6 | 332 | 819 | 1 | 474 | 6.30e-73 | 249 |
| Msa0247400 | AT3G13020.1 | 26.276 | 666 | 411 | 18 | 137 | 793 | 10 | 604 | 1.29e-67 | 237 |
| Msa0247400 | AT3G13030.3 | 27.615 | 478 | 330 | 8 | 319 | 790 | 62 | 529 | 8.90e-58 | 208 |
| Msa0247400 | AT3G13030.4 | 27.615 | 478 | 330 | 8 | 319 | 790 | 62 | 529 | 8.90e-58 | 208 |
| Msa0247400 | AT3G13030.1 | 27.615 | 478 | 330 | 8 | 319 | 790 | 62 | 529 | 8.90e-58 | 208 |
| Msa0247400 | AT3G13030.2 | 27.615 | 478 | 330 | 8 | 319 | 790 | 62 | 529 | 8.90e-58 | 208 |
| Msa0247400 | AT3G13010.1 | 28.398 | 493 | 324 | 12 | 310 | 793 | 99 | 571 | 1.75e-53 | 196 |
| Msa0247400 | AT3G13030.5 | 27.883 | 477 | 297 | 10 | 319 | 790 | 62 | 496 | 9.65e-50 | 184 |
| Msa0247400 | AT5G33406.1 | 28.530 | 347 | 235 | 4 | 511 | 856 | 1 | 335 | 1.07e-44 | 169 |
| Msa0247400 | AT1G43260.1 | 33.333 | 225 | 148 | 2 | 318 | 541 | 47 | 270 | 1.49e-37 | 143 |
| Msa0247400 | AT5G31412.1 | 37.879 | 132 | 80 | 1 | 353 | 484 | 110 | 239 | 1.05e-20 | 96.7 |
| Msa0247400 | AT1G36095.1 | 31.176 | 170 | 116 | 1 | 412 | 581 | 131 | 299 | 2.33e-20 | 93.2 |
Find 216 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTCTCAACGCTGGTTC+TGG | 0.154626 | 2_2:+29541355 | None:intergenic |
| CAGCATTTAGCCCGAGTTTC+TGG | 0.174313 | 2_2:-29542012 | Msa0247400:CDS |
| CCCATCCAGCCAACTTATTT+CGG | 0.211422 | 2_2:-29541110 | Msa0247400:CDS |
| TTCAGCAAGATAATTCTTAA+TGG | 0.235713 | 2_2:+29541060 | None:intergenic |
| ACTATGTTCATTTCATCTAT+TGG | 0.240523 | 2_2:-29537905 | Msa0247400:three_prime_UTR |
| CAGTTGTGGGCCTGTATTAT+TGG | 0.241415 | 2_2:-29537972 | Msa0247400:three_prime_UTR |
| ATTAGAGGACATTCCCTTAA+AGG | 0.245359 | 2_2:+29541384 | None:intergenic |
| GGCGGTGGAGGTAGAGTTTC+AGG | 0.250554 | 2_2:+29543783 | None:intergenic |
| ACAACATTTGGCTAGGATTC+CGG | 0.260414 | 2_2:-29541647 | Msa0247400:CDS |
| CCATCCAGCCAACTTATTTC+GGG | 0.265939 | 2_2:-29541109 | Msa0247400:CDS |
| AACATATTTATTTAAGCTTT+TGG | 0.267928 | 2_2:-29540885 | Msa0247400:CDS |
| GAATTATCTTGCTGAATATA+AGG | 0.282596 | 2_2:-29541053 | Msa0247400:CDS |
| CATTAACTTTCTTCTGTGAT+AGG | 0.284701 | 2_2:+29539445 | None:intergenic |
| AGATACAGGAAAGACCTTTA+AGG | 0.304417 | 2_2:-29541398 | Msa0247400:CDS |
| CTCTTTCCCCTGGCTTGAAC+TGG | 0.307893 | 2_2:+29540355 | None:intergenic |
| CAACATTTGGCTAGGATTCC+GGG | 0.313749 | 2_2:-29541646 | Msa0247400:CDS |
| AACTAATATACAATCAAATA+TGG | 0.313840 | 2_2:-29540541 | Msa0247400:CDS |
| CACGGAAATATGAGCCATTC+TGG | 0.321607 | 2_2:-29540151 | Msa0247400:CDS |
| AAAGGAGAAGGAATTTGTTC+TGG | 0.322409 | 2_2:-29540661 | Msa0247400:CDS |
| GAAAAGCTGGGATATATAAA+AGG | 0.325977 | 2_2:-29537753 | Msa0247400:three_prime_UTR |
| ATCTTCTCAACGCTGGTTCT+GGG | 0.327767 | 2_2:+29541356 | None:intergenic |
| TTGCTGAATATAAGGCTTCC+TGG | 0.330441 | 2_2:-29541045 | Msa0247400:CDS |
| TAATAGATTTAAACAACATT+TGG | 0.335959 | 2_2:-29541659 | Msa0247400:CDS |
| AGATGACTTTGGAACTGAAT+TGG | 0.347315 | 2_2:-29539742 | Msa0247400:CDS |
| CTGGAATTGGCTGGTCAATA+TGG | 0.351924 | 2_2:-29541148 | Msa0247400:CDS |
| TTCCCAGCAGCTTTATAGTT+AGG | 0.352395 | 2_2:+29540695 | None:intergenic |
| TGCTACATTGCAGAATTTGT+TGG | 0.356863 | 2_2:-29540438 | Msa0247400:CDS |
| GTTCGGTTGTTTACGAAAAT+CGG | 0.359433 | 2_2:+29543854 | None:intergenic |
| GATACAGGAAAGACCTTTAA+GGG | 0.362013 | 2_2:-29541397 | Msa0247400:CDS |
| AATCACTGGTTGTTCGATAA+TGG | 0.364280 | 2_2:-29541020 | Msa0247400:CDS |
| GAGAATGCCAAGTAAGAAAA+AGG | 0.364495 | 2_2:-29539389 | Msa0247400:CDS |
| AAACAAAATCTTGACGATAT+CGG | 0.369198 | 2_2:+29540051 | None:intergenic |
| ATTGTGGAGGAATAAGGATT+TGG | 0.371031 | 2_2:-29537999 | Msa0247400:three_prime_UTR |
| CTTGCAATCAAATCTATTCA+TGG | 0.376674 | 2_2:-29540182 | Msa0247400:CDS |
| TCTTACAATAAATATATCAT+TGG | 0.380029 | 2_2:+29537860 | None:intergenic |
| GTGAGTTGAGGTTGAATTAC+TGG | 0.381146 | 2_2:+29543886 | None:intergenic |
| TTCCAATGAGCTGGTTACTA+TGG | 0.382722 | 2_2:-29538144 | Msa0247400:CDS |
| TTAACTCCTCTTCGGTCCTT+AGG | 0.382982 | 2_2:-29541778 | Msa0247400:CDS |
| TCATCTTCATTATCAGACTT+TGG | 0.384649 | 2_2:+29541499 | None:intergenic |
| GAATGTGTCTTTCAAACAAA+TGG | 0.386596 | 2_2:-29540394 | Msa0247400:CDS |
| GACAAAGTAGTGGAAGAAAT+AGG | 0.386856 | 2_2:-29540863 | Msa0247400:CDS |
| AAGCTTTGATTGATAATGAT+AGG | 0.396713 | 2_2:-29541432 | Msa0247400:CDS |
| GTTGATCCTGGTTGGGATCA+TGG | 0.396999 | 2_2:-29542117 | Msa0247400:CDS |
| GAATTGCGATAGCTCTCATT+TGG | 0.397246 | 2_2:-29542172 | Msa0247400:five_prime_UTR |
| AGGATTTGTTGATCCTGGTT+GGG | 0.401216 | 2_2:-29542124 | Msa0247400:CDS |
| CAGGATTTGTTGATCCTGGT+TGG | 0.401261 | 2_2:-29542125 | Msa0247400:CDS |
| TGCATCTTCAACTACATTAG+TGG | 0.404393 | 2_2:+29540907 | None:intergenic |
| TTATCAGACTTTGGATAGAA+AGG | 0.411222 | 2_2:+29541508 | None:intergenic |
| TCCACAGGATTTGTTGATCC+TGG | 0.414673 | 2_2:-29542129 | Msa0247400:CDS |
| TGGTTCTGGGCTAGTATTAG+AGG | 0.417393 | 2_2:+29541369 | None:intergenic |
| TCAAACTTGCAAACAACTAA+AGG | 0.417490 | 2_2:-29541287 | Msa0247400:CDS |
| CATAAAATGCTGGAATTGGC+TGG | 0.424079 | 2_2:-29541157 | Msa0247400:CDS |
| CACAGGGAAGCCAATAATAC+AGG | 0.429876 | 2_2:+29537962 | None:intergenic |
| GATCCAGATCGAAGTGGAAT+CGG | 0.435638 | 2_2:+29543762 | None:intergenic |
| CAATAATACAGGCCCACAAC+TGG | 0.436114 | 2_2:+29537973 | None:intergenic |
| AATTCAGCTCAAGATGACTT+TGG | 0.436462 | 2_2:-29539753 | Msa0247400:CDS |
| CCGAAATAAGTTGGCTGGAT+GGG | 0.437278 | 2_2:+29541110 | None:intergenic |
| ACTCCTAACTATAAAGCTGC+TGG | 0.439048 | 2_2:-29540698 | Msa0247400:CDS |
| GTTGTTTACGAAAATCGGTT+AGG | 0.440208 | 2_2:+29543859 | None:intergenic |
| ATGTATATAACGACTTGTAC+AGG | 0.442939 | 2_2:-29540211 | Msa0247400:CDS |
| TACAAGTCGTTATATACATA+TGG | 0.444904 | 2_2:+29540215 | None:intergenic |
| GAAGCACACTGGGTGCCAGC+TGG | 0.445938 | 2_2:+29540467 | None:intergenic |
| TGTAGAAGAGTGCATGGAAA+AGG | 0.446118 | 2_2:-29540579 | Msa0247400:CDS |
| TCATCTAGATCAACACCAAA+AGG | 0.447915 | 2_2:+29538227 | None:intergenic |
| CTGGCTTGAACTGGAGAACC+TGG | 0.450018 | 2_2:+29540364 | None:intergenic |
| TTCCTTGCGTAATTTCTTAG+TGG | 0.450982 | 2_2:+29541252 | None:intergenic |
| AAGACGATGAAGAGCAAGTT+GGG | 0.451975 | 2_2:-29541852 | Msa0247400:CDS |
| AGGATTTGGTTGCCAGTTGT+GGG | 0.457361 | 2_2:-29537985 | Msa0247400:three_prime_UTR |
| CTGTAAATTTAACTCCTCTT+CGG | 0.460622 | 2_2:-29541786 | Msa0247400:CDS |
| AGCCATAGTAACCAGCTCAT+TGG | 0.461570 | 2_2:+29538142 | None:intergenic |
| ACAAATCCTGTGGAGCGTAT+TGG | 0.462386 | 2_2:+29542138 | None:intergenic |
| AAGGATTTGGTTGCCAGTTG+TGG | 0.462411 | 2_2:-29537986 | Msa0247400:three_prime_UTR |
| CAAACAAATGGATGTCATCC+AGG | 0.463821 | 2_2:-29540382 | Msa0247400:CDS |
| CAGGTTCTCCAGTTCAAGCC+AGG | 0.466832 | 2_2:-29540363 | Msa0247400:CDS |
| GCAGATCATGCTAACATTGA+TGG | 0.469084 | 2_2:-29538095 | Msa0247400:CDS |
| TTACAAGGTGCTACCTCTCC+CGG | 0.469285 | 2_2:+29541628 | None:intergenic |
| GTTCGATAATGGCTGATAGT+TGG | 0.469340 | 2_2:-29541009 | Msa0247400:CDS |
| AGGAGATACTGTAAAGATAC+AGG | 0.472813 | 2_2:-29541412 | Msa0247400:CDS |
| CGAAGTGGAATCGGCGGTGG+AGG | 0.474735 | 2_2:+29543771 | None:intergenic |
| TTTCTTGTTTCATCTCCTCA+TGG | 0.477086 | 2_2:-29540956 | Msa0247400:CDS |
| GTGGGAACACGGTGTTGCTC+AGG | 0.477649 | 2_2:-29541740 | Msa0247400:CDS |
| AAGCAAAGGAAAGCAATTGA+TGG | 0.478129 | 2_2:-29541824 | Msa0247400:CDS |
| TTACCTCACTAGCTGCTTGG+TGG | 0.478382 | 2_2:-29539599 | Msa0247400:intron |
| GTTTGAAGATTCTGATTTGT+GGG | 0.479122 | 2_2:+29541304 | None:intergenic |
| TACTGTGAGAAAGTTGTTAG+TGG | 0.482355 | 2_2:-29541688 | Msa0247400:CDS |
| TCCTTGCGTAATTTCTTAGT+GGG | 0.485270 | 2_2:+29541253 | None:intergenic |
| TAGCTCTCATTTGGATGTAA+TGG | 0.485369 | 2_2:-29542163 | Msa0247400:exon |
| TTTGGCTAGGATTCCGGGAG+AGG | 0.486181 | 2_2:-29541641 | Msa0247400:CDS |
| ACATAGGCAACCCGAGGGTA+AGG | 0.487674 | 2_2:-29541539 | Msa0247400:CDS |
| CCGCCGATTCCACTTCGATC+TGG | 0.488168 | 2_2:-29543765 | Msa0247400:five_prime_UTR |
| TGATAGTTGGAGAGATGCAC+AGG | 0.488405 | 2_2:-29540996 | Msa0247400:CDS |
| TTGGCAATTAGCACAAGAAC+AGG | 0.492641 | 2_2:-29539723 | Msa0247400:CDS |
| CATATTGCAAGTGTTTCAAA+AGG | 0.493903 | 2_2:-29540264 | Msa0247400:CDS |
| AGATGACGAGTATGAGCAGC+AGG | 0.496541 | 2_2:-29541482 | Msa0247400:CDS |
| TGGATCTGAAAGGCATCTAA+AGG | 0.499713 | 2_2:-29538168 | Msa0247400:CDS |
| TGAAGTAACATACTGTGAAA+AGG | 0.499819 | 2_2:-29541989 | Msa0247400:CDS |
| GCAACACCGTGTTCCCACCC+TGG | 0.504664 | 2_2:+29541745 | None:intergenic |
| CTGTCTATCACCTTCCAGAA+TGG | 0.505410 | 2_2:+29540137 | None:intergenic |
| GCGACCCGAAATAAGTTGGC+TGG | 0.508113 | 2_2:+29541105 | None:intergenic |
| AGATTTAGCTGTGTTTGTCA+TGG | 0.508667 | 2_2:-29537779 | Msa0247400:three_prime_UTR |
| TGCTGAATATAAGGCTTCCT+GGG | 0.512753 | 2_2:-29541044 | Msa0247400:CDS |
| AAATAAAAGAGAATATGAAA+TGG | 0.513526 | 2_2:-29541579 | Msa0247400:CDS |
| GATCGAAGTGGAATCGGCGG+TGG | 0.515102 | 2_2:+29543768 | None:intergenic |
| CGGTGGAAGATCGACGGCGG+TGG | 0.515682 | 2_2:+29543827 | None:intergenic |
| CTCCTAACTATAAAGCTGCT+GGG | 0.516115 | 2_2:-29540697 | Msa0247400:CDS |
| CGCGCCGGGTCGAGTTAAGA+AGG | 0.516679 | 2_2:-29543915 | Msa0247400:five_prime_UTR |
| AGGTGAAGAAAATGTAGTGC+AGG | 0.518522 | 2_2:-29540843 | Msa0247400:intron |
| AAGTAAGCAGCCAAGTAAAG+AGG | 0.521409 | 2_2:+29540089 | None:intergenic |
| GGATCTGAAAGGCATCTAAA+GGG | 0.523160 | 2_2:-29538167 | Msa0247400:CDS |
| GGAGGTAGAGTTTCAGGCGG+TGG | 0.523670 | 2_2:+29543810 | None:intergenic |
| GATTCAATAGACTATGATGA+TGG | 0.524240 | 2_2:-29538188 | Msa0247400:CDS |
| CAGTTCAAGCCAGGGGAAAG+AGG | 0.525879 | 2_2:-29540354 | Msa0247400:CDS |
| ATGAAAAGTGAATTTACCCA+TGG | 0.526104 | 2_2:-29540506 | Msa0247400:CDS |
| GAAAGCAATTGATGGATGGC+AGG | 0.527166 | 2_2:-29541816 | Msa0247400:CDS |
| TACTGTGGGAAAGTTGTTAG+TGG | 0.528153 | 2_2:-29542054 | Msa0247400:CDS |
| GTCTGAATGAATGCATTGTT+CGG | 0.528690 | 2_2:-29539918 | Msa0247400:CDS |
| CAACACCGTGTTCCCACCCT+GGG | 0.529812 | 2_2:+29541746 | None:intergenic |
| AACATACTGTGAAAAGGCTC+CGG | 0.529848 | 2_2:-29541983 | Msa0247400:CDS |
| AGTTTGAAGATTCTGATTTG+TGG | 0.530141 | 2_2:+29541303 | None:intergenic |
| ACAGAGTCTGCAGCTTGTAA+AGG | 0.530270 | 2_2:+29541187 | None:intergenic |
| AAGGCTTCCTGGGCAATCAC+TGG | 0.530608 | 2_2:-29541034 | Msa0247400:CDS |
| CATCTAGATCAACACCAAAA+GGG | 0.531085 | 2_2:+29538228 | None:intergenic |
| TCGACGGCGGTGGAATCGTT+CGG | 0.531682 | 2_2:+29543837 | None:intergenic |
| CATTCTGGAAGGTGATAGAC+AGG | 0.532154 | 2_2:-29540136 | Msa0247400:CDS |
| ATGTTACTTCACCAGAAACT+CGG | 0.532770 | 2_2:+29542001 | None:intergenic |
| CAGATCCGACTCATCGTCAC+TGG | 0.533981 | 2_2:+29538070 | None:intergenic |
| CCCGAAATAAGTTGGCTGGA+TGG | 0.536151 | 2_2:+29541109 | None:intergenic |
| GATTTAAACAACATTTGGCT+AGG | 0.537741 | 2_2:-29541654 | Msa0247400:CDS |
| GCTTTAGAAGCTCATTCCCA+TGG | 0.538107 | 2_2:+29540489 | None:intergenic |
| CTGGGAAAATGCTTGAAGAA+AGG | 0.538331 | 2_2:-29540679 | Msa0247400:CDS |
| CCCTGGGTCAACATATCCTA+AGG | 0.538425 | 2_2:+29541762 | None:intergenic |
| AAAAGCGACCCGAAATAAGT+TGG | 0.544977 | 2_2:+29541101 | None:intergenic |
| CAAGTTGGGTGTAGAAGCAA+AGG | 0.546966 | 2_2:-29541838 | Msa0247400:CDS |
| GAGCTGGTTACTATGGCTGA+TGG | 0.551004 | 2_2:-29538137 | Msa0247400:CDS |
| GGCATCAGATCCTTACCCTC+GGG | 0.551027 | 2_2:+29541529 | None:intergenic |
| AATATGAAATGGCATCGCAC+TGG | 0.551192 | 2_2:-29541568 | Msa0247400:CDS |
| ACAACATGGAATAAGTTGCT+TGG | 0.551673 | 2_2:-29539574 | Msa0247400:CDS |
| TCCTTAGGATATGTTGACCC+AGG | 0.553110 | 2_2:-29541763 | Msa0247400:CDS |
| AAGAGCACTTACTTGCTGAC+TGG | 0.555352 | 2_2:-29539326 | Msa0247400:CDS |
| TAGATGTGTAGAAGAGTGCA+TGG | 0.555568 | 2_2:-29540585 | Msa0247400:CDS |
| TTTGTCATGGAAAGAAAAGC+TGG | 0.557149 | 2_2:-29537766 | Msa0247400:three_prime_UTR |
| TCTAAAGGGTTCCAATGAGC+TGG | 0.557230 | 2_2:-29538153 | Msa0247400:CDS |
| TGTGGGAAAGTTGTTAGTGG+TGG | 0.558139 | 2_2:-29542051 | Msa0247400:CDS |
| GTAGAAGAGTGCATGGAAAA+GGG | 0.564298 | 2_2:-29540578 | Msa0247400:CDS |
| TGGTCAATATGGACAAGGAC+TGG | 0.565647 | 2_2:-29541137 | Msa0247400:CDS |
| CTATTCATGGCGATGATGCA+CGG | 0.567695 | 2_2:-29540169 | Msa0247400:CDS |
| ATGGCTCCAATACGCTCCAC+AGG | 0.568838 | 2_2:-29542144 | Msa0247400:CDS |
| GGATCTTCTTCCGTACGTTG+AGG | 0.573648 | 2_2:-29543744 | Msa0247400:intron |
| AGGCATCAGATCCTTACCCT+CGG | 0.574066 | 2_2:+29541528 | None:intergenic |
| GAGTGAGTAATCAAGTTACA+AGG | 0.574681 | 2_2:-29538027 | Msa0247400:exon |
| CTTTAGAAGCTCATTCCCAT+GGG | 0.577632 | 2_2:+29540490 | None:intergenic |
| AATCTTGATCTTCTCAACGC+TGG | 0.579689 | 2_2:+29541349 | None:intergenic |
| TCATTTCATCTATTGGAGCA+TGG | 0.579898 | 2_2:-29537898 | Msa0247400:three_prime_UTR |
| ACCACTGCACAAAGCTCTGA+TGG | 0.580910 | 2_2:-29539294 | Msa0247400:CDS |
| AATGAGCTTCTAAAGCCAGC+TGG | 0.582059 | 2_2:-29540482 | Msa0247400:CDS |
| AAACAACTAAAGGTTAAGAC+AGG | 0.582514 | 2_2:-29541277 | Msa0247400:CDS |
| GGAAGAAAATGCAGTATGTG+AGG | 0.583624 | 2_2:-29540301 | Msa0247400:CDS |
| AAATGCTTGAAGAAAGGAGA+AGG | 0.584761 | 2_2:-29540673 | Msa0247400:CDS |
| AAAATGAAGGAAAATCTGGA+AGG | 0.590836 | 2_2:-29541946 | Msa0247400:CDS |
| AGCAAAGCTAGAAGCACACT+GGG | 0.592642 | 2_2:+29540457 | None:intergenic |
| AGGTTAGATGCAATTACTGT+GGG | 0.594300 | 2_2:-29542068 | Msa0247400:CDS |
| TGTTACTTCACCAGAAACTC+GGG | 0.594532 | 2_2:+29542002 | None:intergenic |
| ACTATGGCTGATGGAGCAGT+AGG | 0.594939 | 2_2:-29538128 | Msa0247400:CDS |
| TAGCAAAGCTAGAAGCACAC+TGG | 0.595235 | 2_2:+29540456 | None:intergenic |
| CGGTTAGGAATCGTGAGTTG+AGG | 0.597930 | 2_2:+29543874 | None:intergenic |
| TCTTGAGCTGAATTATAATG+AGG | 0.598079 | 2_2:+29539762 | None:intergenic |
| ACCATCAGAGCTTTGTGCAG+TGG | 0.599060 | 2_2:+29539293 | None:intergenic |
| TAGAGAACAACCTCAACGTA+CGG | 0.599132 | 2_2:+29543734 | None:intergenic |
| AAAGGAAAGCAATTGATGGA+TGG | 0.603413 | 2_2:-29541820 | Msa0247400:CDS |
| TTCAGGCGGTGGAAGATCGA+CGG | 0.605865 | 2_2:+29543821 | None:intergenic |
| AGGTTCTCCAGTTCAAGCCA+GGG | 0.607330 | 2_2:-29540362 | Msa0247400:CDS |
| AGGATATGTTGACCCAGGGT+GGG | 0.611188 | 2_2:-29541758 | Msa0247400:CDS |
| GTTGACCCAGGGTGGGAACA+CGG | 0.611332 | 2_2:-29541751 | Msa0247400:CDS |
| TGAAAAGTGAATTTACCCAT+GGG | 0.616274 | 2_2:-29540505 | Msa0247400:CDS |
| ACAAAGCTCTGATGGTGACA+AGG | 0.616552 | 2_2:-29539286 | Msa0247400:intron |
| TCTTGACGATATCGGTATGA+CGG | 0.616642 | 2_2:+29540059 | None:intergenic |
| CCTTAGGATATGTTGACCCA+GGG | 0.617378 | 2_2:-29541762 | Msa0247400:CDS |
| AAATGAAGGAAAATCTGGAA+GGG | 0.618504 | 2_2:-29541945 | Msa0247400:CDS |
| AAGGTTAGATGCAATTACTG+TGG | 0.618593 | 2_2:-29542069 | Msa0247400:CDS |
| TTGTAGAACATTCTCAGCAG+AGG | 0.619249 | 2_2:+29539347 | None:intergenic |
| GCTGCTTGGTGGCAACAACA+TGG | 0.620763 | 2_2:-29539588 | Msa0247400:CDS |
| GAAATATGAGCCATTCTGGA+AGG | 0.621062 | 2_2:-29540147 | Msa0247400:CDS |
| GAAGACGATGAAGAGCAAGT+TGG | 0.621085 | 2_2:-29541853 | Msa0247400:CDS |
| TAGGATATGTTGACCCAGGG+TGG | 0.622379 | 2_2:-29541759 | Msa0247400:CDS |
| ACAAGAACAGGTCTTGAACC+AGG | 0.622503 | 2_2:-29539711 | Msa0247400:intron |
| CGAACAACCAGTGATTGCCC+AGG | 0.630440 | 2_2:+29541027 | None:intergenic |
| TTGTCATGGAAAGAAAAGCT+GGG | 0.635762 | 2_2:-29537765 | Msa0247400:three_prime_UTR |
| GTTGGAGAGATGCACAGGGT+AGG | 0.638423 | 2_2:-29540991 | Msa0247400:CDS |
| ACCAGGATCAACAAATCCTG+TGG | 0.638687 | 2_2:+29542128 | None:intergenic |
| TGTGAGAAAGTTGTTAGTGG+CGG | 0.639509 | 2_2:-29541685 | Msa0247400:CDS |
| TGAGTTGAGGTTGAATTACT+GGG | 0.639974 | 2_2:+29543887 | None:intergenic |
| GTGTTTCAAAAGGTGTCTAG+TGG | 0.640607 | 2_2:-29540254 | Msa0247400:CDS |
| TGTCTGACTTAATATGCGAA+CGG | 0.644471 | 2_2:+29539536 | None:intergenic |
| TGTATATAACGACTTGTACA+GGG | 0.644698 | 2_2:-29540210 | Msa0247400:CDS |
| GCAATGCCATGATCCCAACC+AGG | 0.647244 | 2_2:+29542111 | None:intergenic |
| ATACTGTGAAAAGGCTCCGG+AGG | 0.649046 | 2_2:-29541980 | Msa0247400:CDS |
| ACCCACTAAGAAATTACGCA+AGG | 0.652287 | 2_2:-29541254 | Msa0247400:CDS |
| GAAGAAGATCCAGATCGAAG+TGG | 0.652956 | 2_2:+29543756 | None:intergenic |
| GTGGGAAAGTTGTTAGTGGT+GGG | 0.655583 | 2_2:-29542050 | Msa0247400:CDS |
| ATGGCATTGCTCAAGATGAG+CGG | 0.658795 | 2_2:-29542098 | Msa0247400:CDS |
| TGGTGCCAGTGACGATGAGT+CGG | 0.666465 | 2_2:-29538075 | Msa0247400:CDS |
| TACTTTGCATCATATGAACA+AGG | 0.667545 | 2_2:-29541455 | Msa0247400:CDS |
| GAAACAAAGTATACACCATG+AGG | 0.669038 | 2_2:+29540941 | None:intergenic |
| CCAGATCGAAGTGGAATCGG+CGG | 0.669399 | 2_2:+29543765 | None:intergenic |
| TTGGCTGGTCAATATGGACA+AGG | 0.674064 | 2_2:-29541142 | Msa0247400:CDS |
| GGTTCTCCAGTTCAAGCCAG+GGG | 0.675328 | 2_2:-29540361 | Msa0247400:CDS |
| GAGACCTTCTTAACTCGACC+CGG | 0.678300 | 2_2:+29543911 | None:intergenic |
| AAAAGACATAGGCAACCCGA+GGG | 0.683630 | 2_2:-29541544 | Msa0247400:CDS |
| ACATATCCTAAGGACCGAAG+AGG | 0.686475 | 2_2:+29541772 | None:intergenic |
| TTTCATCTATTGGAGCATGG+TGG | 0.711455 | 2_2:-29537895 | Msa0247400:three_prime_UTR |
| AGGCGGTGGAAGATCGACGG+CGG | 0.718090 | 2_2:+29543824 | None:intergenic |
| TTAATACAATAGATAGCACA+AGG | 0.720093 | 2_2:+29540635 | None:intergenic |
| ACTATGATGATGGATCTGAA+AGG | 0.723341 | 2_2:-29538178 | Msa0247400:CDS |
| TAGCATTCTGATGTAGTACG+TGG | 0.728853 | 2_2:-29539940 | Msa0247400:CDS |
| CTTGTAAAGGAATTCCTGCG+TGG | 0.735670 | 2_2:+29541200 | None:intergenic |
| GATAGTTGGAGAGATGCACA+GGG | 0.743814 | 2_2:-29540995 | Msa0247400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTTTTTACAGTT+AGG | - | chr2_2:29538093-29538112 | Msa0247400:CDS | 10.0% |
| !!! | TATAATTTTTTTTACAGTTA+GGG | - | chr2_2:29538094-29538113 | Msa0247400:CDS | 10.0% |
| !! | GGTAATAATTAAATAATATA+AGG | - | chr2_2:29542571-29542590 | Msa0247400:intron | 10.0% |
| !!! | TATCTTTTTTATTTTTTAAG+GGG | + | chr2_2:29543311-29543330 | None:intergenic | 10.0% |
| !! | TATTAAGTAAATCAAAAGAT+TGG | - | chr2_2:29538663-29538682 | Msa0247400:intron | 15.0% |
| !!! | GTTGGTTTTTAAATTTATAT+GGG | - | chr2_2:29538901-29538920 | Msa0247400:intron | 15.0% |
| !!! | CTCTTATGTATTTTTTTTTA+AGG | - | chr2_2:29539243-29539262 | Msa0247400:intron | 15.0% |
| !! | TAATAGATTTAAACAACATT+TGG | - | chr2_2:29539980-29539999 | Msa0247400:intron | 15.0% |
| !! | AAATAAAAGAGAATATGAAA+TGG | - | chr2_2:29540060-29540079 | Msa0247400:CDS | 15.0% |
| !!! | AACATATTTATTTAAGCTTT+TGG | - | chr2_2:29540754-29540773 | Msa0247400:intron | 15.0% |
| !!! | ATATTAGTTTTGTAATTTTC+TGG | + | chr2_2:29541087-29541106 | None:intergenic | 15.0% |
| !! | AACTAATATACAATCAAATA+TGG | - | chr2_2:29541098-29541117 | Msa0247400:CDS | 15.0% |
| !!! | TAAACAAATTTTGACTTTTT+AGG | - | chr2_2:29542660-29542679 | Msa0247400:intron | 15.0% |
| !! | TTATTATATGTTGAAACTAT+TGG | - | chr2_2:29543189-29543208 | Msa0247400:intron | 15.0% |
| !! | TCTTACAATAAATATATCAT+TGG | + | chr2_2:29543782-29543801 | None:intergenic | 15.0% |
| !!! | AAAAGGAAATTTTGATTTTC+AGG | - | chr2_2:29537983-29538002 | Msa0247400:three_prime_UTR | 20.0% |
| !!! | TTTTGATTTTCAGGAAATTT+AGG | - | chr2_2:29537992-29538011 | Msa0247400:three_prime_UTR | 20.0% |
| !! | GAAATTTAGGTATTTGTATA+TGG | - | chr2_2:29538005-29538024 | Msa0247400:three_prime_UTR | 20.0% |
| !! | CGTACAAAATCATTAAATTA+CGG | + | chr2_2:29538452-29538471 | None:intergenic | 20.0% |
| !! | ATAAATTTAAAAACCAACCA+AGG | + | chr2_2:29538899-29538918 | None:intergenic | 20.0% |
| !!! | GGTTGGTTTTTAAATTTATA+TGG | - | chr2_2:29538900-29538919 | Msa0247400:intron | 20.0% |
| !! | ATACTTTGTTGACATTAAAA+AGG | + | chr2_2:29539192-29539211 | None:intergenic | 20.0% |
| !!! | ATTTTAAGATAAACTTCTTC+TGG | + | chr2_2:29540044-29540063 | None:intergenic | 20.0% |
| !!! | TGTATATTTTCATAAAATGC+TGG | - | chr2_2:29540472-29540491 | Msa0247400:CDS | 20.0% |
| !!! | TTTTTTCTTTTCTATTCTTG+TGG | - | chr2_2:29540829-29540848 | Msa0247400:intron | 20.0% |
| !! | CCATTAGAAAAATATTATTC+TGG | + | chr2_2:29541621-29541640 | None:intergenic | 20.0% |
| !!! | CCAGAATAATATTTTTCTAA+TGG | - | chr2_2:29541618-29541637 | Msa0247400:CDS | 20.0% |
| !! | TATAAAACATATATAGTGCA+TGG | + | chr2_2:29542468-29542487 | None:intergenic | 20.0% |
| !!! | AATTTGTTTATAATAGTGAC+CGG | + | chr2_2:29542650-29542669 | None:intergenic | 20.0% |
| !! | AATACAAGTGTAATGAAAAA+AGG | - | chr2_2:29542932-29542951 | Msa0247400:intron | 20.0% |
| !!! | TTTTGATCAGTTGATTTTTC+AGG | - | chr2_2:29538031-29538050 | Msa0247400:exon | 25.0% |
| !!! | TTGATTTTTCAGGTTATGTT+TGG | - | chr2_2:29538041-29538060 | Msa0247400:CDS | 25.0% |
| !!! | TTTTTTACAGTTAGGGTTTA+AGG | - | chr2_2:29538101-29538120 | Msa0247400:CDS | 25.0% |
| ! | CAACATGTAATTCAAAATGA+AGG | + | chr2_2:29538202-29538221 | None:intergenic | 25.0% |
| !! | TTGAATTACATGTTGCATTT+TGG | - | chr2_2:29538207-29538226 | Msa0247400:CDS | 25.0% |
| ! | AAAAGTTATCTGATCCAAAT+TGG | + | chr2_2:29538301-29538320 | None:intergenic | 25.0% |
| !! | TCATAAAATTTTCCTTAGCA+TGG | - | chr2_2:29538486-29538505 | Msa0247400:intron | 25.0% |
| ! | GATTTACTTAATAAGCAACA+AGG | + | chr2_2:29538656-29538675 | None:intergenic | 25.0% |
| !!! | TAATGAGTTGATTCTTTTGT+TGG | - | chr2_2:29538767-29538786 | Msa0247400:intron | 25.0% |
| ! | AGATAATTAGAGACATGAAA+AGG | - | chr2_2:29538845-29538864 | Msa0247400:intron | 25.0% |
| !! | AATATAGAATTTGCTCAAGT+TGG | - | chr2_2:29538869-29538888 | Msa0247400:intron | 25.0% |
| !! | ATATAGAATTTGCTCAAGTT+GGG | - | chr2_2:29538870-29538889 | Msa0247400:intron | 25.0% |
| ! | ATTGATGTAATGTGGAATTA+GGG | - | chr2_2:29538967-29538986 | Msa0247400:intron | 25.0% |
| !! | ACAATAATCTTCAAGAGTTT+TGG | + | chr2_2:29539050-29539069 | None:intergenic | 25.0% |
| ! | AGTATTCTGACAAAAATCAA+GGG | + | chr2_2:29539132-29539151 | None:intergenic | 25.0% |
| ! | ATGCTTTGTAACAAATTTCA+AGG | + | chr2_2:29539156-29539175 | None:intergenic | 25.0% |
| !!! | ACAAAGTATTGATGTTTCTT+TGG | - | chr2_2:29539203-29539222 | Msa0247400:intron | 25.0% |
| ! | AATACATAAGAGAAAGCAAA+AGG | + | chr2_2:29539235-29539254 | None:intergenic | 25.0% |
| ! | ATGCTTGAAAATTAAAGCAA+AGG | + | chr2_2:29539295-29539314 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTAGAGATTT+TGG | - | chr2_2:29539322-29539341 | Msa0247400:CDS | 25.0% |
| !!! | AAGCTTTGATTGATAATGAT+AGG | - | chr2_2:29540207-29540226 | Msa0247400:CDS | 25.0% |
| !! | TTTTCATAAAATGCTGGAAT+TGG | - | chr2_2:29540478-29540497 | Msa0247400:CDS | 25.0% |
| ! | TTCAGCAAGATAATTCTTAA+TGG | + | chr2_2:29540582-29540601 | None:intergenic | 25.0% |
| ! | GAATTATCTTGCTGAATATA+AGG | - | chr2_2:29540586-29540605 | Msa0247400:CDS | 25.0% |
| ! | CAAGTTAATATTTACGATGA+AGG | + | chr2_2:29540861-29540880 | None:intergenic | 25.0% |
| ! | ACTTGTATCTGTAATTAATC+TGG | - | chr2_2:29540876-29540895 | Msa0247400:CDS | 25.0% |
| ! | AGTTATTACCTACATCAAAA+GGG | + | chr2_2:29540915-29540934 | None:intergenic | 25.0% |
| ! | TTAATACAATAGATAGCACA+AGG | + | chr2_2:29541007-29541026 | None:intergenic | 25.0% |
| !!! | TTGTTTTGAATGTCACATTT+TGG | - | chr2_2:29541317-29541336 | Msa0247400:CDS | 25.0% |
| !!! | TTTTGAAACACTTGCAATAT+GGG | + | chr2_2:29541376-29541395 | None:intergenic | 25.0% |
| ! | TACAAGTCGTTATATACATA+TGG | + | chr2_2:29541427-29541446 | None:intergenic | 25.0% |
| ! | AAACAAAATCTTGACGATAT+CGG | + | chr2_2:29541591-29541610 | None:intergenic | 25.0% |
| !!! | ATATCGTCAAGATTTTGTTT+CGG | - | chr2_2:29541591-29541610 | Msa0247400:CDS | 25.0% |
| ! | ATATCATATAGCAGTCATTA+AGG | + | chr2_2:29541798-29541817 | None:intergenic | 25.0% |
| ! | TCATGCAACAATTAAATATG+CGG | - | chr2_2:29541972-29541991 | Msa0247400:CDS | 25.0% |
| !! | TAGCAATAATTGCTGTTAAT+TGG | - | chr2_2:29542387-29542406 | Msa0247400:intron | 25.0% |
| ! | AAGACAACTATAAATGTATC+AGG | + | chr2_2:29542416-29542435 | None:intergenic | 25.0% |
| ! | TGATACATTTATAGTTGTCT+TGG | - | chr2_2:29542415-29542434 | Msa0247400:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr2_2:29542739-29542758 | Msa0247400:intron | 25.0% |
| ! | CAAAAATAGAATTTCTGTCT+TGG | + | chr2_2:29542829-29542848 | None:intergenic | 25.0% |
| !! | CAAGACAGAAATTCTATTTT+TGG | - | chr2_2:29542827-29542846 | Msa0247400:intron | 25.0% |
| !! | CATTACACTTGTATTTTGTT+TGG | + | chr2_2:29542927-29542946 | None:intergenic | 25.0% |
| ! | AAACAATCTATGACCAAATT+GGG | + | chr2_2:29543166-29543185 | None:intergenic | 25.0% |
| ! | AAAACAATCTATGACCAAAT+TGG | + | chr2_2:29543167-29543186 | None:intergenic | 25.0% |
| ! | GGATATTCTACAAAAACAAA+AGG | + | chr2_2:29543393-29543412 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAATATCCCTTT+TGG | - | chr2_2:29543397-29543416 | Msa0247400:intron | 25.0% |
| ! | ACTATGTTCATTTCATCTAT+TGG | - | chr2_2:29543734-29543753 | Msa0247400:intron | 25.0% |
| !!! | TTTTTCAGGTTATGTTTGGT+TGG | - | chr2_2:29538045-29538064 | Msa0247400:CDS | 30.0% |
| !! | CAATTTAGTTTGTAAGACGT+AGG | - | chr2_2:29538142-29538161 | Msa0247400:CDS | 30.0% |
| CTAACAATGTTGATATTGCT+AGG | - | chr2_2:29538169-29538188 | Msa0247400:CDS | 30.0% | |
| ! | TTTTCTGTCTGTAGATAAAG+TGG | + | chr2_2:29538426-29538445 | None:intergenic | 30.0% |
| CAAAAGATTGGAATTGACAT+AGG | - | chr2_2:29538675-29538694 | Msa0247400:intron | 30.0% | |
| ! | TACAATACACGAGTTACTTT+CGG | - | chr2_2:29538944-29538963 | Msa0247400:intron | 30.0% |
| GATTGATGTAATGTGGAATT+AGG | - | chr2_2:29538966-29538985 | Msa0247400:intron | 30.0% | |
| !!! | TCAAGAGTTTTGGATTGAAA+TGG | + | chr2_2:29539040-29539059 | None:intergenic | 30.0% |
| ! | TGCTCTTTTTATACCACATT+GGG | - | chr2_2:29539106-29539125 | Msa0247400:intron | 30.0% |
| CAGTATTCTGACAAAAATCA+AGG | + | chr2_2:29539133-29539152 | None:intergenic | 30.0% | |
| !! | ATATGTGATGGATGAATACA+AGG | + | chr2_2:29539434-29539453 | None:intergenic | 30.0% |
| TGAAGTAACATACTGTGAAA+AGG | - | chr2_2:29539650-29539669 | Msa0247400:intron | 30.0% | |
| !! | CCAGATTTTCCTTCATTTTT+AGG | + | chr2_2:29539692-29539711 | None:intergenic | 30.0% |
| CCTAAAAATGAAGGAAAATC+TGG | - | chr2_2:29539689-29539708 | Msa0247400:intron | 30.0% | |
| AAAATGAAGGAAAATCTGGA+AGG | - | chr2_2:29539693-29539712 | Msa0247400:intron | 30.0% | |
| AAATGAAGGAAAATCTGGAA+GGG | - | chr2_2:29539694-29539713 | Msa0247400:intron | 30.0% | |
| CTGTAAATTTAACTCCTCTT+CGG | - | chr2_2:29539853-29539872 | Msa0247400:intron | 30.0% | |
| GATTTAAACAACATTTGGCT+AGG | - | chr2_2:29539985-29540004 | Msa0247400:intron | 30.0% | |
| TTATCAGACTTTGGATAGAA+AGG | + | chr2_2:29540134-29540153 | None:intergenic | 30.0% | |
| TCATCTTCATTATCAGACTT+TGG | + | chr2_2:29540143-29540162 | None:intergenic | 30.0% | |
| TACTTTGCATCATATGAACA+AGG | - | chr2_2:29540184-29540203 | Msa0247400:CDS | 30.0% | |
| ! | GTTTGAAGATTCTGATTTGT+GGG | + | chr2_2:29540338-29540357 | None:intergenic | 30.0% |
| ! | AGTTTGAAGATTCTGATTTG+TGG | + | chr2_2:29540339-29540358 | None:intergenic | 30.0% |
| TCAAACTTGCAAACAACTAA+AGG | - | chr2_2:29540352-29540371 | Msa0247400:CDS | 30.0% | |
| AAACAACTAAAGGTTAAGAC+AGG | - | chr2_2:29540362-29540381 | Msa0247400:CDS | 30.0% | |
| GTTAATATTTACGATGAAGG+AGG | + | chr2_2:29540858-29540877 | None:intergenic | 30.0% | |
| TTATTACCTACATCAAAAGG+GGG | + | chr2_2:29540913-29540932 | None:intergenic | 30.0% | |
| GTTATTACCTACATCAAAAG+GGG | + | chr2_2:29540914-29540933 | None:intergenic | 30.0% | |
| CAGTTATTACCTACATCAAA+AGG | + | chr2_2:29540916-29540935 | None:intergenic | 30.0% | |
| ATGAAAAGTGAATTTACCCA+TGG | - | chr2_2:29541133-29541152 | Msa0247400:CDS | 30.0% | |
| TGAAAAGTGAATTTACCCAT+GGG | - | chr2_2:29541134-29541153 | Msa0247400:CDS | 30.0% | |
| GAATGTGTCTTTCAAACAAA+TGG | - | chr2_2:29541245-29541264 | Msa0247400:CDS | 30.0% | |
| !!! | CTTTTGAAACACTTGCAATA+TGG | + | chr2_2:29541377-29541396 | None:intergenic | 30.0% |
| CATATTGCAAGTGTTTCAAA+AGG | - | chr2_2:29541375-29541394 | Msa0247400:CDS | 30.0% | |
| ATGTATATAACGACTTGTAC+AGG | - | chr2_2:29541428-29541447 | Msa0247400:CDS | 30.0% | |
| TGTATATAACGACTTGTACA+GGG | - | chr2_2:29541429-29541448 | Msa0247400:CDS | 30.0% | |
| CTTGCAATCAAATCTATTCA+TGG | - | chr2_2:29541457-29541476 | Msa0247400:CDS | 30.0% | |
| ! | TTTTTGTCATCCTCTTTACT+TGG | - | chr2_2:29541540-29541559 | Msa0247400:CDS | 30.0% |
| TCTTGAGCTGAATTATAATG+AGG | + | chr2_2:29541880-29541899 | None:intergenic | 30.0% | |
| ATCTAATGCAGTAATTTACC+TGG | + | chr2_2:29541949-29541968 | None:intergenic | 30.0% | |
| CATTAACTTTCTTCTGTGAT+AGG | + | chr2_2:29542197-29542216 | None:intergenic | 30.0% | |
| ATCAGACCTGATATTAAATC+AGG | - | chr2_2:29542504-29542523 | Msa0247400:intron | 30.0% | |
| GACTATCCTGATTTAATATC+AGG | + | chr2_2:29542513-29542532 | None:intergenic | 30.0% | |
| GTCATCGTTTCAAAGTTTAA+TGG | - | chr2_2:29542530-29542549 | Msa0247400:intron | 30.0% | |
| CATTCAATAAATGACGTATG+TGG | - | chr2_2:29542685-29542704 | Msa0247400:intron | 30.0% | |
| TAATAAAAACTTACTCCCTC+CGG | + | chr2_2:29542761-29542780 | None:intergenic | 30.0% | |
| AAAAATAGAGTCTTGCTAAC+CGG | + | chr2_2:29542879-29542898 | None:intergenic | 30.0% | |
| ACAAGTGTAATGAAAAAAGG+AGG | - | chr2_2:29542935-29542954 | Msa0247400:intron | 30.0% | |
| CAAGTGTAATGAAAAAAGGA+GGG | - | chr2_2:29542936-29542955 | Msa0247400:intron | 30.0% | |
| TTTCTTCTATAAAACTCCTG+AGG | - | chr2_2:29542988-29543007 | Msa0247400:intron | 30.0% | |
| TTCTTCTATAAAACTCCTGA+GGG | - | chr2_2:29542989-29543008 | Msa0247400:intron | 30.0% | |
| CAAGGTAATCAAAACCAAAA+GGG | + | chr2_2:29543065-29543084 | None:intergenic | 30.0% | |
| CTATATAGTACAAAAGTCCA+AGG | + | chr2_2:29543083-29543102 | None:intergenic | 30.0% | |
| TTCAAAAGTCAAACCCAATT+TGG | - | chr2_2:29543150-29543169 | Msa0247400:intron | 30.0% | |
| TTGTTACATGCAACATAAGT+TGG | - | chr2_2:29543254-29543273 | Msa0247400:intron | 30.0% | |
| TGTTACATGCAACATAAGTT+GGG | - | chr2_2:29543255-29543274 | Msa0247400:intron | 30.0% | |
| GATTCAATAGACTATGATGA+TGG | - | chr2_2:29543451-29543470 | Msa0247400:intron | 30.0% | |
| ! | AAGTTACAAGGTTTTCATTG+TGG | - | chr2_2:29543624-29543643 | Msa0247400:intron | 30.0% |
| GAAAAGCTGGGATATATAAA+AGG | - | chr2_2:29543886-29543905 | Msa0247400:five_prime_UTR | 30.0% | |
| ! | TGAGTTGAGGTTGAATTACT+GGG | + | chr2_2:29537755-29537774 | None:intergenic | 35.0% |
| GTTGTTTACGAAAATCGGTT+AGG | + | chr2_2:29537783-29537802 | None:intergenic | 35.0% | |
| GTTCGGTTGTTTACGAAAAT+CGG | + | chr2_2:29537788-29537807 | None:intergenic | 35.0% | |
| ACTTTCTTGTTCTCGCAATT+GGG | - | chr2_2:29537951-29537970 | Msa0247400:three_prime_UTR | 35.0% | |
| CAATTGGGAATAGTAGCAAA+AGG | - | chr2_2:29537966-29537985 | Msa0247400:three_prime_UTR | 35.0% | |
| TGTAGGATAGTCATCCAATT+TGG | - | chr2_2:29538284-29538303 | Msa0247400:intron | 35.0% | |
| TTCAGACCTGAATGACTTTA+GGG | + | chr2_2:29538359-29538378 | None:intergenic | 35.0% | |
| TAGGGTGAGAAAACTTAATG+TGG | - | chr2_2:29538518-29538537 | Msa0247400:intron | 35.0% | |
| GGAATTGACATAGGTTATGA+AGG | - | chr2_2:29538684-29538703 | Msa0247400:intron | 35.0% | |
| TATCCCTCAACAAAATCACA+AGG | + | chr2_2:29538826-29538845 | None:intergenic | 35.0% | |
| ACTTTCGGATTGATGTAATG+TGG | - | chr2_2:29538959-29538978 | Msa0247400:intron | 35.0% | |
| ! | TTGTGCAACTATGTTTCTGT+CGG | - | chr2_2:29539066-29539085 | Msa0247400:intron | 35.0% |
| ! | GTGCTCTTTTTATACCACAT+TGG | - | chr2_2:29539105-29539124 | Msa0247400:intron | 35.0% |
| ! | AAGGTATCTTTGTTGCCTAT+TGG | - | chr2_2:29539262-29539281 | Msa0247400:intron | 35.0% |
| TAGCTCTCATTTGGATGTAA+TGG | - | chr2_2:29539476-29539495 | Msa0247400:CDS | 35.0% | |
| AAGGTTAGATGCAATTACTG+TGG | - | chr2_2:29539570-29539589 | Msa0247400:CDS | 35.0% | |
| AGGTTAGATGCAATTACTGT+GGG | - | chr2_2:29539571-29539590 | Msa0247400:CDS | 35.0% | |
| ! | ATGTTACTTCACCAGAAACT+CGG | + | chr2_2:29539641-29539660 | None:intergenic | 35.0% |
| !!! | ATTTTTAGGTAGACTTCCTC+CGG | + | chr2_2:29539678-29539697 | None:intergenic | 35.0% |
| GGAAGTCTACCTAAAAATGA+AGG | - | chr2_2:29539680-29539699 | Msa0247400:intron | 35.0% | |
| AAGCAAAGGAAAGCAATTGA+TGG | - | chr2_2:29539815-29539834 | Msa0247400:intron | 35.0% | |
| AAAGGAAAGCAATTGATGGA+TGG | - | chr2_2:29539819-29539838 | Msa0247400:intron | 35.0% | |
| TACTGTGAGAAAGTTGTTAG+TGG | - | chr2_2:29539951-29539970 | Msa0247400:intron | 35.0% | |
| AGGAGATACTGTAAAGATAC+AGG | - | chr2_2:29540227-29540246 | Msa0247400:CDS | 35.0% | |
| AGATACAGGAAAGACCTTTA+AGG | - | chr2_2:29540241-29540260 | Msa0247400:CDS | 35.0% | |
| GATACAGGAAAGACCTTTAA+GGG | - | chr2_2:29540242-29540261 | Msa0247400:CDS | 35.0% | |
| ATTAGAGGACATTCCCTTAA+AGG | + | chr2_2:29540258-29540277 | None:intergenic | 35.0% | |
| TCCTTGCGTAATTTCTTAGT+GGG | + | chr2_2:29540389-29540408 | None:intergenic | 35.0% | |
| TTCCTTGCGTAATTTCTTAG+TGG | + | chr2_2:29540390-29540409 | None:intergenic | 35.0% | |
| ! | AATCACTGGTTGTTCGATAA+TGG | - | chr2_2:29540619-29540638 | Msa0247400:CDS | 35.0% |
| ! | TTTCTTGTTTCATCTCCTCA+TGG | - | chr2_2:29540683-29540702 | Msa0247400:CDS | 35.0% |
| GAAACAAAGTATACACCATG+AGG | + | chr2_2:29540701-29540720 | None:intergenic | 35.0% | |
| TGCATCTTCAACTACATTAG+TGG | + | chr2_2:29540735-29540754 | None:intergenic | 35.0% | |
| ! | TAAGCTTTTGGACAAAGTAG+TGG | - | chr2_2:29540766-29540785 | Msa0247400:intron | 35.0% |
| ! | GACAAAGTAGTGGAAGAAAT+AGG | - | chr2_2:29540776-29540795 | Msa0247400:intron | 35.0% |
| AAATGCTTGAAGAAAGGAGA+AGG | - | chr2_2:29540966-29540985 | Msa0247400:CDS | 35.0% | |
| ! | AAAGGAGAAGGAATTTGTTC+TGG | - | chr2_2:29540978-29540997 | Msa0247400:CDS | 35.0% |
| TGCTACATTGCAGAATTTGT+TGG | - | chr2_2:29541201-29541220 | Msa0247400:CDS | 35.0% | |
| AATTCAGCTCAAGATGACTT+TGG | - | chr2_2:29541886-29541905 | Msa0247400:CDS | 35.0% | |
| !! | AGATGACTTTGGAACTGAAT+TGG | - | chr2_2:29541897-29541916 | Msa0247400:CDS | 35.0% |
| ACAACATGGAATAAGTTGCT+TGG | - | chr2_2:29542065-29542084 | Msa0247400:CDS | 35.0% | |
| TGTCTGACTTAATATGCGAA+CGG | + | chr2_2:29542106-29542125 | None:intergenic | 35.0% | |
| GAGAATGCCAAGTAAGAAAA+AGG | - | chr2_2:29542250-29542269 | Msa0247400:intron | 35.0% | |
| CCAAGTAAGAAAAAGGTCTA+GGG | - | chr2_2:29542257-29542276 | Msa0247400:intron | 35.0% | |
| AAAGTTTAATGGTCTGACCA+GGG | - | chr2_2:29542541-29542560 | Msa0247400:intron | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | + | chr2_2:29542646-29542665 | None:intergenic | 35.0% | |
| TTGTTTATAATAGTGACCGG+AGG | + | chr2_2:29542647-29542666 | None:intergenic | 35.0% | |
| ACGTATGTGGTCTATATTGT+AGG | - | chr2_2:29542698-29542717 | Msa0247400:intron | 35.0% | |
| CCAAGGTAATCAAAACCAAA+AGG | + | chr2_2:29543066-29543085 | None:intergenic | 35.0% | |
| !!! | CCTTTTGGTTTTGATTACCT+TGG | - | chr2_2:29543063-29543082 | Msa0247400:intron | 35.0% |
| CATCTAGATCAACACCAAAA+GGG | + | chr2_2:29543414-29543433 | None:intergenic | 35.0% | |
| TCATCTAGATCAACACCAAA+AGG | + | chr2_2:29543415-29543434 | None:intergenic | 35.0% | |
| !! | ACTATGATGATGGATCTGAA+AGG | - | chr2_2:29543461-29543480 | Msa0247400:intron | 35.0% |
| GAGTGAGTAATCAAGTTACA+AGG | - | chr2_2:29543612-29543631 | Msa0247400:intron | 35.0% | |
| ! | TTACAAGGTTTTCATTGTGG+AGG | - | chr2_2:29543627-29543646 | Msa0247400:intron | 35.0% |
| ! | GTTTTCATTGTGGAGGAATA+AGG | - | chr2_2:29543634-29543653 | Msa0247400:intron | 35.0% |
| ATTGTGGAGGAATAAGGATT+TGG | - | chr2_2:29543640-29543659 | Msa0247400:intron | 35.0% | |
| TTCCCTGTGAAAAATCAAGA+TGG | - | chr2_2:29543691-29543710 | Msa0247400:intron | 35.0% | |
| ! | GACCATCTTGATTTTTCACA+GGG | + | chr2_2:29543696-29543715 | None:intergenic | 35.0% |
| TCATTTCATCTATTGGAGCA+TGG | - | chr2_2:29543741-29543760 | Msa0247400:intron | 35.0% | |
| AGATTTAGCTGTGTTTGTCA+TGG | - | chr2_2:29543860-29543879 | Msa0247400:five_prime_UTR | 35.0% | |
| TTTGTCATGGAAAGAAAAGC+TGG | - | chr2_2:29543873-29543892 | Msa0247400:five_prime_UTR | 35.0% | |
| TTGTCATGGAAAGAAAAGCT+GGG | - | chr2_2:29543874-29543893 | Msa0247400:five_prime_UTR | 35.0% | |
| ! | GTGAGTTGAGGTTGAATTAC+TGG | + | chr2_2:29537756-29537775 | None:intergenic | 40.0% |
| TAGAGAACAACCTCAACGTA+CGG | + | chr2_2:29537908-29537927 | None:intergenic | 40.0% | |
| GACTTTCTTGTTCTCGCAAT+TGG | - | chr2_2:29537950-29537969 | Msa0247400:three_prime_UTR | 40.0% | |
| !! | GGTTGATTTGGATTGGTCTT+TGG | + | chr2_2:29538237-29538256 | None:intergenic | 40.0% |
| TCAGACCTGAATGACTTTAG+GGG | + | chr2_2:29538358-29538377 | None:intergenic | 40.0% | |
| GTTCAGACCTGAATGACTTT+AGG | + | chr2_2:29538360-29538379 | None:intergenic | 40.0% | |
| TTAGCATGGTAAGAGACGTA+GGG | - | chr2_2:29538500-29538519 | Msa0247400:intron | 40.0% | |
| TTAAGCCATGACTCACCTAA+TGG | - | chr2_2:29538544-29538563 | Msa0247400:intron | 40.0% | |
| ! | TCCTCCTTGTGATTTTGTTG+AGG | - | chr2_2:29538819-29538838 | Msa0247400:intron | 40.0% |
| ! | CCTCCTTGTGATTTTGTTGA+GGG | - | chr2_2:29538820-29538839 | Msa0247400:intron | 40.0% |
| AGTCCCAACTTGGCATTTAT+AGG | - | chr2_2:29539014-29539033 | Msa0247400:intron | 40.0% | |
| TGGCCTATAAATGCCAAGTT+GGG | + | chr2_2:29539020-29539039 | None:intergenic | 40.0% | |
| ATGGCCTATAAATGCCAAGT+TGG | + | chr2_2:29539021-29539040 | None:intergenic | 40.0% | |
| GTTTGTGATGTATACGCTAC+TGG | - | chr2_2:29539346-29539365 | Msa0247400:CDS | 40.0% | |
| ATGTATACGCTACTGGAACT+GGG | - | chr2_2:29539353-29539372 | Msa0247400:CDS | 40.0% | |
| ! | TCCATCACATATGCTTTTGC+AGG | - | chr2_2:29539442-29539461 | Msa0247400:CDS | 40.0% |
| ! | ACCTGCAAAAGCATATGTGA+TGG | + | chr2_2:29539446-29539465 | None:intergenic | 40.0% |
| GAATTGCGATAGCTCTCATT+TGG | - | chr2_2:29539467-29539486 | Msa0247400:CDS | 40.0% | |
| !! | AGGATTTGTTGATCCTGGTT+GGG | - | chr2_2:29539515-29539534 | Msa0247400:CDS | 40.0% |
| TCAAGATGAGCGGAAAAAGA+AGG | - | chr2_2:29539551-29539570 | Msa0247400:CDS | 40.0% | |
| TACTGTGGGAAAGTTGTTAG+TGG | - | chr2_2:29539585-29539604 | Msa0247400:CDS | 40.0% | |
| ! | TGTTACTTCACCAGAAACTC+GGG | + | chr2_2:29539640-29539659 | None:intergenic | 40.0% |
| AACATACTGTGAAAAGGCTC+CGG | - | chr2_2:29539656-29539675 | Msa0247400:intron | 40.0% | |
| AAGACGATGAAGAGCAAGTT+GGG | - | chr2_2:29539787-29539806 | Msa0247400:intron | 40.0% | |
| TGTGAGAAAGTTGTTAGTGG+CGG | - | chr2_2:29539954-29539973 | Msa0247400:intron | 40.0% | |
| ACAACATTTGGCTAGGATTC+CGG | - | chr2_2:29539992-29540011 | Msa0247400:intron | 40.0% | |
| !!! | TCTTCTGGAGCACTTTTACA+AGG | + | chr2_2:29540029-29540048 | None:intergenic | 40.0% |
| AATATGAAATGGCATCGCAC+TGG | - | chr2_2:29540071-29540090 | Msa0247400:CDS | 40.0% | |
| ATCGCACTGGAAAAAGACAT+AGG | - | chr2_2:29540084-29540103 | Msa0247400:CDS | 40.0% | |
| AATCTTGATCTTCTCAACGC+TGG | + | chr2_2:29540293-29540312 | None:intergenic | 40.0% | |
| ACCCACTAAGAAATTACGCA+AGG | - | chr2_2:29540385-29540404 | Msa0247400:CDS | 40.0% | |
| CATAAAATGCTGGAATTGGC+TGG | - | chr2_2:29540482-29540501 | Msa0247400:CDS | 40.0% | |
| AAAAGCGACCCGAAATAAGT+TGG | + | chr2_2:29540541-29540560 | None:intergenic | 40.0% | |
| TTGCTGAATATAAGGCTTCC+TGG | - | chr2_2:29540594-29540613 | Msa0247400:CDS | 40.0% | |
| TGCTGAATATAAGGCTTCCT+GGG | - | chr2_2:29540595-29540614 | Msa0247400:CDS | 40.0% | |
| ! | GTTCGATAATGGCTGATAGT+TGG | - | chr2_2:29540630-29540649 | Msa0247400:CDS | 40.0% |
| AGGTGAAGAAAATGTAGTGC+AGG | - | chr2_2:29540796-29540815 | Msa0247400:intron | 40.0% | |
| CTACATCAAAAGGGGGAATT+AGG | + | chr2_2:29540906-29540925 | None:intergenic | 40.0% | |
| ! | CTAATTCCCCCTTTTGATGT+AGG | - | chr2_2:29540904-29540923 | Msa0247400:CDS | 40.0% |
| ACTCCTAACTATAAAGCTGC+TGG | - | chr2_2:29540941-29540960 | Msa0247400:CDS | 40.0% | |
| CTCCTAACTATAAAGCTGCT+GGG | - | chr2_2:29540942-29540961 | Msa0247400:CDS | 40.0% | |
| ! | TTCCCAGCAGCTTTATAGTT+AGG | + | chr2_2:29540947-29540966 | None:intergenic | 40.0% |
| CTGGGAAAATGCTTGAAGAA+AGG | - | chr2_2:29540960-29540979 | Msa0247400:CDS | 40.0% | |
| ! | TAGATGTGTAGAAGAGTGCA+TGG | - | chr2_2:29541054-29541073 | Msa0247400:CDS | 40.0% |
| ! | TGTAGAAGAGTGCATGGAAA+AGG | - | chr2_2:29541060-29541079 | Msa0247400:CDS | 40.0% |
| ! | GTAGAAGAGTGCATGGAAAA+GGG | - | chr2_2:29541061-29541080 | Msa0247400:CDS | 40.0% |
| ! | CTTTAGAAGCTCATTCCCAT+GGG | + | chr2_2:29541152-29541171 | None:intergenic | 40.0% |
| CAAACAAATGGATGTCATCC+AGG | - | chr2_2:29541257-29541276 | Msa0247400:CDS | 40.0% | |
| GGAAGAAAATGCAGTATGTG+AGG | - | chr2_2:29541338-29541357 | Msa0247400:CDS | 40.0% | |
| !! | GTGTTTCAAAAGGTGTCTAG+TGG | - | chr2_2:29541385-29541404 | Msa0247400:CDS | 40.0% |
| GAAATATGAGCCATTCTGGA+AGG | - | chr2_2:29541492-29541511 | Msa0247400:CDS | 40.0% | |
| AAGTAAGCAGCCAAGTAAAG+AGG | + | chr2_2:29541553-29541572 | None:intergenic | 40.0% | |
| TCTTGACGATATCGGTATGA+CGG | + | chr2_2:29541583-29541602 | None:intergenic | 40.0% | |
| TAGCATTCTGATGTAGTACG+TGG | - | chr2_2:29541699-29541718 | Msa0247400:CDS | 40.0% | |
| TTGGCAATTAGCACAAGAAC+AGG | - | chr2_2:29541916-29541935 | Msa0247400:CDS | 40.0% | |
| AGCAGCTAGTGAGGTAAAAA+GGG | + | chr2_2:29542037-29542056 | None:intergenic | 40.0% | |
| AAGCAGCTAGTGAGGTAAAA+AGG | + | chr2_2:29542038-29542057 | None:intergenic | 40.0% | |
| ! | TTTTTACCTCACTAGCTGCT+TGG | - | chr2_2:29542037-29542056 | Msa0247400:CDS | 40.0% |
| ! | TCTTTTGCATGTGAGCATGA+TGG | - | chr2_2:29542132-29542151 | Msa0247400:CDS | 40.0% |
| ! | CTTTTGCATGTGAGCATGAT+GGG | - | chr2_2:29542133-29542152 | Msa0247400:CDS | 40.0% |
| GCCAAGTAAGAAAAAGGTCT+AGG | - | chr2_2:29542256-29542275 | Msa0247400:intron | 40.0% | |
| ! | CCCTAGACCTTTTTCTTACT+TGG | + | chr2_2:29542260-29542279 | None:intergenic | 40.0% |
| TTGTAGAACATTCTCAGCAG+AGG | + | chr2_2:29542295-29542314 | None:intergenic | 40.0% | |
| CAAAGTTTAATGGTCTGACC+AGG | - | chr2_2:29542540-29542559 | Msa0247400:intron | 40.0% | |
| !! | AATTATTACCGGTTCAACCC+TGG | + | chr2_2:29542561-29542580 | None:intergenic | 40.0% |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_2:29542742-29542761 | Msa0247400:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_2:29542743-29542762 | Msa0247400:intron | 40.0% | |
| CAATCAGATGTCCACATTGT+TGG | + | chr2_2:29543364-29543383 | None:intergenic | 40.0% | |
| !! | TGGATCTGAAAGGCATCTAA+AGG | - | chr2_2:29543471-29543490 | Msa0247400:intron | 40.0% |
| !! | GGATCTGAAAGGCATCTAAA+GGG | - | chr2_2:29543472-29543491 | Msa0247400:intron | 40.0% |
| TTCCAATGAGCTGGTTACTA+TGG | - | chr2_2:29543495-29543514 | Msa0247400:intron | 40.0% | |
| GCAGATCATGCTAACATTGA+TGG | - | chr2_2:29543544-29543563 | Msa0247400:intron | 40.0% | |
| ! | CGACCATCTTGATTTTTCAC+AGG | + | chr2_2:29543697-29543716 | None:intergenic | 40.0% |
| TTTCATCTATTGGAGCATGG+TGG | - | chr2_2:29543744-29543763 | Msa0247400:intron | 40.0% | |
| GATCCAGATCGAAGTGGAAT+CGG | + | chr2_2:29537880-29537899 | None:intergenic | 45.0% | |
| GAAGAAGATCCAGATCGAAG+TGG | + | chr2_2:29537886-29537905 | None:intergenic | 45.0% | |
| !! | TATGCGGGGTTGATTTGGAT+TGG | + | chr2_2:29538244-29538263 | None:intergenic | 45.0% |
| ! | CCAAATATGCGGGGTTGATT+TGG | + | chr2_2:29538249-29538268 | None:intergenic | 45.0% |
| CCAAATCAACCCCGCATATT+TGG | - | chr2_2:29538246-29538265 | Msa0247400:intron | 45.0% | |
| TCAACCCCGCATATTTGGAT+CGG | - | chr2_2:29538251-29538270 | Msa0247400:intron | 45.0% | |
| TCCGATCCGATCCAAATATG+CGG | + | chr2_2:29538260-29538279 | None:intergenic | 45.0% | |
| ! | GGATCGGATCGGATTTTTGT+AGG | - | chr2_2:29538267-29538286 | Msa0247400:intron | 45.0% |
| ! | TGCGGTTTCGATCAGTTTTG+AGG | + | chr2_2:29538326-29538345 | None:intergenic | 45.0% |
| GAACACCCCTAAAGTCATTC+AGG | - | chr2_2:29538350-29538369 | Msa0247400:intron | 45.0% | |
| CTACGTCTCTTACCATGCTA+AGG | + | chr2_2:29538501-29538520 | None:intergenic | 45.0% | |
| CTTAGCATGGTAAGAGACGT+AGG | - | chr2_2:29538499-29538518 | Msa0247400:intron | 45.0% | |
| !!! | ACCTAATGGACTGGCCTTTT+TGG | - | chr2_2:29538558-29538577 | Msa0247400:intron | 45.0% |
| ACCAAAAAGGCCAGTCCATT+AGG | + | chr2_2:29538562-29538581 | None:intergenic | 45.0% | |
| !!! | AATGGACTGGCCTTTTTGGT+TGG | - | chr2_2:29538562-29538581 | Msa0247400:intron | 45.0% |
| !!! | ATGGACTGGCCTTTTTGGTT+GGG | - | chr2_2:29538563-29538582 | Msa0247400:intron | 45.0% |
| CCCTCAACAAAATCACAAGG+AGG | + | chr2_2:29538823-29538842 | None:intergenic | 45.0% | |
| !! | TTGCTCAAGTTGGGTTTCCT+TGG | - | chr2_2:29538879-29538898 | Msa0247400:intron | 45.0% |
| !! | TCAAGTTGGGTTTCCTTGGT+TGG | - | chr2_2:29538883-29538902 | Msa0247400:intron | 45.0% |
| !! | TGTCGGTTGCTGTTTCTTGA+TGG | - | chr2_2:29539083-29539102 | Msa0247400:intron | 45.0% |
| CAAAAATCAAGGGCCCAATG+TGG | + | chr2_2:29539122-29539141 | None:intergenic | 45.0% | |
| ! | AGCAAAGGAAGCATGCCAAT+AGG | + | chr2_2:29539280-29539299 | None:intergenic | 45.0% |
| GATGTATACGCTACTGGAAC+TGG | - | chr2_2:29539352-29539371 | Msa0247400:CDS | 45.0% | |
| TGTATACGCTACTGGAACTG+GGG | - | chr2_2:29539354-29539373 | Msa0247400:CDS | 45.0% | |
| ACAAATCCTGTGGAGCGTAT+TGG | + | chr2_2:29539504-29539523 | None:intergenic | 45.0% | |
| !! | TCCACAGGATTTGTTGATCC+TGG | - | chr2_2:29539510-29539529 | Msa0247400:CDS | 45.0% |
| ACCAGGATCAACAAATCCTG+TGG | + | chr2_2:29539514-29539533 | None:intergenic | 45.0% | |
| !! | CAGGATTTGTTGATCCTGGT+TGG | - | chr2_2:29539514-29539533 | Msa0247400:CDS | 45.0% |
| ATGGCATTGCTCAAGATGAG+CGG | - | chr2_2:29539541-29539560 | Msa0247400:CDS | 45.0% | |
| TGTGGGAAAGTTGTTAGTGG+TGG | - | chr2_2:29539588-29539607 | Msa0247400:CDS | 45.0% | |
| GTGGGAAAGTTGTTAGTGGT+GGG | - | chr2_2:29539589-29539608 | Msa0247400:CDS | 45.0% | |
| GAAGACGATGAAGAGCAAGT+TGG | - | chr2_2:29539786-29539805 | Msa0247400:intron | 45.0% | |
| ! | CAAGTTGGGTGTAGAAGCAA+AGG | - | chr2_2:29539801-29539820 | Msa0247400:intron | 45.0% |
| ! | GAAAGCAATTGATGGATGGC+AGG | - | chr2_2:29539823-29539842 | Msa0247400:intron | 45.0% |
| TTAACTCCTCTTCGGTCCTT+AGG | - | chr2_2:29539861-29539880 | Msa0247400:intron | 45.0% | |
| ACATATCCTAAGGACCGAAG+AGG | + | chr2_2:29539870-29539889 | None:intergenic | 45.0% | |
| TCCTTAGGATATGTTGACCC+AGG | - | chr2_2:29539876-29539895 | Msa0247400:CDS | 45.0% | |
| CCTTAGGATATGTTGACCCA+GGG | - | chr2_2:29539877-29539896 | Msa0247400:CDS | 45.0% | |
| CAACATTTGGCTAGGATTCC+GGG | - | chr2_2:29539993-29540012 | Msa0247400:intron | 45.0% | |
| AAAAAGACATAGGCAACCCG+AGG | - | chr2_2:29540094-29540113 | Msa0247400:CDS | 45.0% | |
| AAAAGACATAGGCAACCCGA+GGG | - | chr2_2:29540095-29540114 | Msa0247400:CDS | 45.0% | |
| !! | TGGTTCTGGGCTAGTATTAG+AGG | + | chr2_2:29540273-29540292 | None:intergenic | 45.0% |
| !! | ATCTTCTCAACGCTGGTTCT+GGG | + | chr2_2:29540286-29540305 | None:intergenic | 45.0% |
| CTTGTAAAGGAATTCCTGCG+TGG | + | chr2_2:29540442-29540461 | None:intergenic | 45.0% | |
| ACAGAGTCTGCAGCTTGTAA+AGG | + | chr2_2:29540455-29540474 | None:intergenic | 45.0% | |
| ! | CTGGAATTGGCTGGTCAATA+TGG | - | chr2_2:29540491-29540510 | Msa0247400:CDS | 45.0% |
| ! | TTGGCTGGTCAATATGGACA+AGG | - | chr2_2:29540497-29540516 | Msa0247400:CDS | 45.0% |
| TGGTCAATATGGACAAGGAC+TGG | - | chr2_2:29540502-29540521 | Msa0247400:CDS | 45.0% | |
| ! | CCGAAATAAGTTGGCTGGAT+GGG | + | chr2_2:29540532-29540551 | None:intergenic | 45.0% |
| CCCATCCAGCCAACTTATTT+CGG | - | chr2_2:29540529-29540548 | Msa0247400:CDS | 45.0% | |
| CCATCCAGCCAACTTATTTC+GGG | - | chr2_2:29540530-29540549 | Msa0247400:CDS | 45.0% | |
| !!! | TATTTCGGGTCGCTTTTTGC+AGG | - | chr2_2:29540544-29540563 | Msa0247400:CDS | 45.0% |
| TGATAGTTGGAGAGATGCAC+AGG | - | chr2_2:29540643-29540662 | Msa0247400:CDS | 45.0% | |
| GATAGTTGGAGAGATGCACA+GGG | - | chr2_2:29540644-29540663 | Msa0247400:CDS | 45.0% | |
| !! | GCTTTAGAAGCTCATTCCCA+TGG | + | chr2_2:29541153-29541172 | None:intergenic | 45.0% |
| !! | AATGAGCTTCTAAAGCCAGC+TGG | - | chr2_2:29541157-29541176 | Msa0247400:CDS | 45.0% |
| ! | AGCAAAGCTAGAAGCACACT+GGG | + | chr2_2:29541185-29541204 | None:intergenic | 45.0% |
| ! | TAGCAAAGCTAGAAGCACAC+TGG | + | chr2_2:29541186-29541205 | None:intergenic | 45.0% |
| !!! | TTTTTTGCACCTCTTTCCCC+TGG | + | chr2_2:29541297-29541316 | None:intergenic | 45.0% |
| CTATTCATGGCGATGATGCA+CGG | - | chr2_2:29541470-29541489 | Msa0247400:CDS | 45.0% | |
| CACGGAAATATGAGCCATTC+TGG | - | chr2_2:29541488-29541507 | Msa0247400:CDS | 45.0% | |
| CTGTCTATCACCTTCCAGAA+TGG | + | chr2_2:29541505-29541524 | None:intergenic | 45.0% | |
| ! | CATTCTGGAAGGTGATAGAC+AGG | - | chr2_2:29541503-29541522 | Msa0247400:CDS | 45.0% |
| ACAAGAACAGGTCTTGAACC+AGG | - | chr2_2:29541928-29541947 | Msa0247400:CDS | 45.0% | |
| !! | AAGAGCACTTACTTGCTGAC+TGG | - | chr2_2:29542313-29542332 | Msa0247400:intron | 45.0% |
| ! | ACAAAGCTCTGATGGTGACA+AGG | - | chr2_2:29542353-29542372 | Msa0247400:intron | 45.0% |
| AGGAGAATGCTAAACAGTCC+AGG | - | chr2_2:29542591-29542610 | Msa0247400:intron | 45.0% | |
| GGAGAATGCTAAACAGTCCA+GGG | - | chr2_2:29542592-29542611 | Msa0247400:intron | 45.0% | |
| GAGAATGCTAAACAGTCCAG+GGG | - | chr2_2:29542593-29542612 | Msa0247400:intron | 45.0% | |
| !! | ACCAAAAGAAGTACTCCCTC+CGG | - | chr2_2:29542628-29542647 | Msa0247400:intron | 45.0% |
| GGATTTCTTAACGAGTGCCT+CGG | - | chr2_2:29542848-29542867 | Msa0247400:intron | 45.0% | |
| GATTTCTTAACGAGTGCCTC+GGG | - | chr2_2:29542849-29542868 | Msa0247400:intron | 45.0% | |
| ATTTCTTAACGAGTGCCTCG+GGG | - | chr2_2:29542850-29542869 | Msa0247400:intron | 45.0% | |
| TTCGAGACTGGAAACAGATC+CGG | - | chr2_2:29543014-29543033 | Msa0247400:intron | 45.0% | |
| AAGGGCCAGTTTGACAAGTT+GGG | + | chr2_2:29543047-29543066 | None:intergenic | 45.0% | |
| AAAGGGCCAGTTTGACAAGT+TGG | + | chr2_2:29543048-29543067 | None:intergenic | 45.0% | |
| ! | ACTTGTCAAACTGGCCCTTT+TGG | - | chr2_2:29543048-29543067 | Msa0247400:intron | 45.0% |
| CTTCGCTGCTGACAAACATA+TGG | + | chr2_2:29543339-29543358 | None:intergenic | 45.0% | |
| TCTAAAGGGTTCCAATGAGC+TGG | - | chr2_2:29543486-29543505 | Msa0247400:intron | 45.0% | |
| AGCCATAGTAACCAGCTCAT+TGG | + | chr2_2:29543500-29543519 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGTTGCCAGTTG+TGG | - | chr2_2:29543653-29543672 | Msa0247400:intron | 45.0% |
| ! | AGGATTTGGTTGCCAGTTGT+GGG | - | chr2_2:29543654-29543673 | Msa0247400:intron | 45.0% |
| CAATAATACAGGCCCACAAC+TGG | + | chr2_2:29543669-29543688 | None:intergenic | 45.0% | |
| CAGTTGTGGGCCTGTATTAT+TGG | - | chr2_2:29543667-29543686 | Msa0247400:intron | 45.0% | |
| CACAGGGAAGCCAATAATAC+AGG | + | chr2_2:29543680-29543699 | None:intergenic | 45.0% | |
| !!! | TATATATGTTTTATAAATAA+AGG | - | chr2_2:29542473-29542492 | Msa0247400:intron | 5.0% |
| !! | TTATATTATTTAATTATTAC+CGG | + | chr2_2:29542572-29542591 | None:intergenic | 5.0% |
| !!! | TTATCTTTTTTATTTTTTAA+GGG | + | chr2_2:29543312-29543331 | None:intergenic | 5.0% |
| !!! | ATTATCTTTTTTATTTTTTA+AGG | + | chr2_2:29543313-29543332 | None:intergenic | 5.0% |
| GAGACCTTCTTAACTCGACC+CGG | + | chr2_2:29537731-29537750 | None:intergenic | 50.0% | |
| CGGTTAGGAATCGTGAGTTG+AGG | + | chr2_2:29537768-29537787 | None:intergenic | 50.0% | |
| GGATCTTCTTCCGTACGTTG+AGG | - | chr2_2:29537895-29537914 | Msa0247400:three_prime_UTR | 50.0% | |
| CGATCCGATCCAAATATGCG+GGG | + | chr2_2:29538258-29538277 | None:intergenic | 50.0% | |
| CCGATCCGATCCAAATATGC+GGG | + | chr2_2:29538259-29538278 | None:intergenic | 50.0% | |
| CCCGCATATTTGGATCGGAT+CGG | - | chr2_2:29538256-29538275 | Msa0247400:intron | 50.0% | |
| ACTCACACGCACAACTGTGA+GGG | + | chr2_2:29538388-29538407 | None:intergenic | 50.0% | |
| AACTCACACGCACAACTGTG+AGG | + | chr2_2:29538389-29538408 | None:intergenic | 50.0% | |
| CCAGTCCATTAGGTGAGTCA+TGG | + | chr2_2:29538552-29538571 | None:intergenic | 50.0% | |
| ! | CCATGACTCACCTAATGGAC+TGG | - | chr2_2:29538549-29538568 | Msa0247400:intron | 50.0% |
| TGAAGCAGATGCTGCGCTAA+TGG | - | chr2_2:29538723-29538742 | Msa0247400:intron | 50.0% | |
| GAAGCAGATGCTGCGCTAAT+GGG | - | chr2_2:29538724-29538743 | Msa0247400:intron | 50.0% | |
| TCTCGATGCTAGTCCCAACT+TGG | - | chr2_2:29539004-29539023 | Msa0247400:intron | 50.0% | |
| GTTGATCCTGGTTGGGATCA+TGG | - | chr2_2:29539522-29539541 | Msa0247400:CDS | 50.0% | |
| CAGCATTTAGCCCGAGTTTC+TGG | - | chr2_2:29539627-29539646 | Msa0247400:intron | 50.0% | |
| ATACTGTGAAAAGGCTCCGG+AGG | - | chr2_2:29539659-29539678 | Msa0247400:intron | 50.0% | |
| CCCTGGGTCAACATATCCTA+AGG | + | chr2_2:29539880-29539899 | None:intergenic | 50.0% | |
| TAGGATATGTTGACCCAGGG+TGG | - | chr2_2:29539880-29539899 | Msa0247400:CDS | 50.0% | |
| AGGATATGTTGACCCAGGGT+GGG | - | chr2_2:29539881-29539900 | Msa0247400:CDS | 50.0% | |
| ! | TTACAAGGTGCTACCTCTCC+CGG | + | chr2_2:29540014-29540033 | None:intergenic | 50.0% |
| AGGCATCAGATCCTTACCCT+CGG | + | chr2_2:29540114-29540133 | None:intergenic | 50.0% | |
| AGATGACGAGTATGAGCAGC+AGG | - | chr2_2:29540157-29540176 | Msa0247400:CDS | 50.0% | |
| !! | GATCTTCTCAACGCTGGTTC+TGG | + | chr2_2:29540287-29540306 | None:intergenic | 50.0% |
| ! | TGCAAGTTCTTTTGCCACGC+AGG | - | chr2_2:29540425-29540444 | Msa0247400:CDS | 50.0% |
| ! | CCCGAAATAAGTTGGCTGGA+TGG | + | chr2_2:29540533-29540552 | None:intergenic | 50.0% |
| AGGTTCTCCAGTTCAAGCCA+GGG | - | chr2_2:29541277-29541296 | Msa0247400:CDS | 50.0% | |
| TTACCTCACTAGCTGCTTGG+TGG | - | chr2_2:29542040-29542059 | Msa0247400:CDS | 50.0% | |
| ! | ACCACTGCACAAAGCTCTGA+TGG | - | chr2_2:29542345-29542364 | Msa0247400:intron | 50.0% |
| ! | ACCATCAGAGCTTTGTGCAG+TGG | + | chr2_2:29542349-29542368 | None:intergenic | 50.0% |
| !!! | ACCGGAGGGAGTACTTCTTT+TGG | + | chr2_2:29542632-29542651 | None:intergenic | 50.0% |
| TTTCTTAACGAGTGCCTCGG+GGG | - | chr2_2:29542851-29542870 | Msa0247400:intron | 50.0% | |
| CTGGAAACAGATCCGGTTTC+CGG | - | chr2_2:29543021-29543040 | Msa0247400:intron | 50.0% | |
| GAGCTGGTTACTATGGCTGA+TGG | - | chr2_2:29543502-29543521 | Msa0247400:intron | 50.0% | |
| ACTATGGCTGATGGAGCAGT+AGG | - | chr2_2:29543511-29543530 | Msa0247400:intron | 50.0% | |
| TTCAGGCGGTGGAAGATCGA+CGG | + | chr2_2:29537821-29537840 | None:intergenic | 55.0% | |
| GGTGGAGGTAGAGTTTCAGG+CGG | + | chr2_2:29537835-29537854 | None:intergenic | 55.0% | |
| GGTGGAGGTAGAGTTTCAGG+CGG | + | chr2_2:29537835-29537854 | None:intergenic | 55.0% | |
| CCAGATCGAAGTGGAATCGG+CGG | + | chr2_2:29537877-29537896 | None:intergenic | 55.0% | |
| !! | CTTTAGGGGTGTTCGCAGTG+CGG | + | chr2_2:29538344-29538363 | None:intergenic | 55.0% |
| ACGCACAACTGTGAGGGCAA+AGG | + | chr2_2:29538382-29538401 | None:intergenic | 55.0% | |
| !!! | GGCCTTTTTGGTTGGGCTCT+CGG | - | chr2_2:29538570-29538589 | Msa0247400:intron | 55.0% |
| AGCCGAGAGCCCAACCAAAA+AGG | + | chr2_2:29538575-29538594 | None:intergenic | 55.0% | |
| ATACGCTACTGGAACTGGGG+AGG | - | chr2_2:29539357-29539376 | Msa0247400:CDS | 55.0% | |
| ACTGGAACTGGGGAGGTTCT+CGG | - | chr2_2:29539364-29539383 | Msa0247400:CDS | 55.0% | |
| ATGGCTCCAATACGCTCCAC+AGG | - | chr2_2:29539495-29539514 | Msa0247400:CDS | 55.0% | |
| GCAATGCCATGATCCCAACC+AGG | + | chr2_2:29539531-29539550 | None:intergenic | 55.0% | |
| TTTGGCTAGGATTCCGGGAG+AGG | - | chr2_2:29539998-29540017 | Msa0247400:intron | 55.0% | |
| ACATAGGCAACCCGAGGGTA+AGG | - | chr2_2:29540100-29540119 | Msa0247400:CDS | 55.0% | |
| GGCATCAGATCCTTACCCTC+GGG | + | chr2_2:29540113-29540132 | None:intergenic | 55.0% | |
| ! | GCGACCCGAAATAAGTTGGC+TGG | + | chr2_2:29540537-29540556 | None:intergenic | 55.0% |
| !!! | TTCGGGTCGCTTTTTGCAGG+AGG | - | chr2_2:29540547-29540566 | Msa0247400:CDS | 55.0% |
| AAGGCTTCCTGGGCAATCAC+TGG | - | chr2_2:29540605-29540624 | Msa0247400:CDS | 55.0% | |
| CGAACAACCAGTGATTGCCC+AGG | + | chr2_2:29540615-29540634 | None:intergenic | 55.0% | |
| GTTGGAGAGATGCACAGGGT+AGG | - | chr2_2:29540648-29540667 | Msa0247400:CDS | 55.0% | |
| ! | CTGGCTTGAACTGGAGAACC+TGG | + | chr2_2:29541278-29541297 | None:intergenic | 55.0% |
| CAGGTTCTCCAGTTCAAGCC+AGG | - | chr2_2:29541276-29541295 | Msa0247400:CDS | 55.0% | |
| GGTTCTCCAGTTCAAGCCAG+GGG | - | chr2_2:29541278-29541297 | Msa0247400:CDS | 55.0% | |
| ! | CTCTTTCCCCTGGCTTGAAC+TGG | + | chr2_2:29541287-29541306 | None:intergenic | 55.0% |
| CAGTTCAAGCCAGGGGAAAG+AGG | - | chr2_2:29541285-29541304 | Msa0247400:CDS | 55.0% | |
| TTGCCACCAAGCAGCTAGTG+AGG | + | chr2_2:29542046-29542065 | None:intergenic | 55.0% | |
| ! | GCTGCTTGGTGGCAACAACA+TGG | - | chr2_2:29542051-29542070 | Msa0247400:CDS | 55.0% |
| TGGTCTGACCAGGGTTGAAC+CGG | - | chr2_2:29542550-29542569 | Msa0247400:intron | 55.0% | |
| ! | GCTAAACAGTCCAGGGGCAT+TGG | - | chr2_2:29542599-29542618 | Msa0247400:intron | 55.0% |
| TGGTGCATAACCAATGCCCC+TGG | + | chr2_2:29542612-29542631 | None:intergenic | 55.0% | |
| TTCCAGTCTCGAAGACCCTC+AGG | + | chr2_2:29543007-29543026 | None:intergenic | 55.0% | |
| ! | TGACAAGTTGGGCCGGAAAC+CGG | + | chr2_2:29543036-29543055 | None:intergenic | 55.0% |
| TCCGGCCCAACTTGTCAAAC+TGG | - | chr2_2:29543039-29543058 | Msa0247400:intron | 55.0% | |
| ! | GCCAGTTTGACAAGTTGGGC+CGG | + | chr2_2:29543043-29543062 | None:intergenic | 55.0% |
| ! | GCAGCGAAGCACCAACAATG+TGG | - | chr2_2:29543350-29543369 | Msa0247400:intron | 55.0% |
| ! | TGGTGCCAGTGACGATGAGT+CGG | - | chr2_2:29543564-29543583 | Msa0247400:intron | 55.0% |
| CAGATCCGACTCATCGTCAC+TGG | + | chr2_2:29543572-29543591 | None:intergenic | 55.0% | |
| TCGACGGCGGTGGAATCGTT+CGG | + | chr2_2:29537805-29537824 | None:intergenic | 60.0% | |
| GGAGGTAGAGTTTCAGGCGG+TGG | + | chr2_2:29537832-29537851 | None:intergenic | 60.0% | |
| GGCGGTGGAGGTAGAGTTTC+AGG | + | chr2_2:29537838-29537857 | None:intergenic | 60.0% | |
| GGTAGAGTTTCAGGCGGTGG+AGG | + | chr2_2:29537829-29537848 | None:intergenic | 60.0% | |
| GGAGGTAGAGTTTCAGGCGG+TGG | + | chr2_2:29537832-29537851 | None:intergenic | 60.0% | |
| GGCGGTGGAGGTAGAGTTTC+AGG | + | chr2_2:29537838-29537857 | None:intergenic | 60.0% | |
| GATCGAAGTGGAATCGGCGG+TGG | + | chr2_2:29537874-29537893 | None:intergenic | 60.0% | |
| !! | CCGCCGATTCCACTTCGATC+TGG | - | chr2_2:29537874-29537893 | Msa0247400:three_prime_UTR | 60.0% |
| TGGGCTCTCGGCTCTTCTCA+TGG | - | chr2_2:29538582-29538601 | Msa0247400:intron | 60.0% | |
| GGGCTCTCGGCTCTTCTCAT+GGG | - | chr2_2:29538583-29538602 | Msa0247400:intron | 60.0% | |
| GTTGACCCAGGGTGGGAACA+CGG | - | chr2_2:29539888-29539907 | Msa0247400:CDS | 60.0% | |
| CAACACCGTGTTCCCACCCT+GGG | + | chr2_2:29539896-29539915 | None:intergenic | 60.0% | |
| !! | GTGGGAACACGGTGTTGCTC+AGG | - | chr2_2:29539899-29539918 | Msa0247400:CDS | 60.0% |
| CTCCTGAGGGTCTTCGAGAC+TGG | - | chr2_2:29543002-29543021 | Msa0247400:intron | 60.0% | |
| AGGCGGTGGAAGATCGACGG+CGG | + | chr2_2:29537818-29537837 | None:intergenic | 65.0% | |
| CGAAGTGGAATCGGCGGTGG+AGG | + | chr2_2:29537871-29537890 | None:intergenic | 65.0% | |
| GCAACACCGTGTTCCCACCC+TGG | + | chr2_2:29539897-29539916 | None:intergenic | 65.0% | |
| GAAGCACACTGGGTGCCAGC+TGG | + | chr2_2:29541175-29541194 | None:intergenic | 65.0% | |
| CGGTGGAAGATCGACGGCGG+TGG | + | chr2_2:29537815-29537834 | None:intergenic | 70.0% | |
| ! | AACGAGTGCCTCGGGGGCAC+CGG | - | chr2_2:29542857-29542876 | Msa0247400:intron | 70.0% |
| CTTGCTAACCGGTGCCCCCG+AGG | + | chr2_2:29542868-29542887 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 29537727 | 29543934 | 29537727 | ID=Msa0247400;Name=Msa0247400 |
| chr2_2 | mRNA | 29537727 | 29543934 | 29537727 | ID=Msa0247400-mRNA-1;Parent=Msa0247400;Name=Msa0247400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=200|1|1|1|0.71|0.62|8|313|902 |
| chr2_2 | exon | 29537727 | 29538255 | 29537727 | ID=Msa0247400-mRNA-1:exon:10487;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29539287 | 29539609 | 29539287 | ID=Msa0247400-mRNA-1:exon:10486;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29539712 | 29539787 | 29539712 | ID=Msa0247400-mRNA-1:exon:10485;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29539876 | 29539959 | 29539876 | ID=Msa0247400-mRNA-1:exon:10484;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29540049 | 29540735 | 29540049 | ID=Msa0247400-mRNA-1:exon:10483;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29540844 | 29542197 | 29540844 | ID=Msa0247400-mRNA-1:exon:10482;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29543745 | 29543802 | 29543745 | ID=Msa0247400-mRNA-1:exon:10481;Parent=Msa0247400-mRNA-1 |
| chr2_2 | exon | 29543824 | 29543934 | 29543824 | ID=Msa0247400-mRNA-1:exon:10480;Parent=Msa0247400-mRNA-1 |
| chr2_2 | five_prime_UTR | 29543824 | 29543934 | 29543824 | ID=Msa0247400-mRNA-1:five_prime_utr;Parent=Msa0247400-mRNA-1 |
| chr2_2 | five_prime_UTR | 29543745 | 29543802 | 29543745 | ID=Msa0247400-mRNA-1:five_prime_utr;Parent=Msa0247400-mRNA-1 |
| chr2_2 | five_prime_UTR | 29542167 | 29542197 | 29542167 | ID=Msa0247400-mRNA-1:five_prime_utr;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29540844 | 29542166 | 29540844 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29540049 | 29540735 | 29540049 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29539876 | 29539959 | 29539876 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29539712 | 29539787 | 29539712 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29539287 | 29539609 | 29539287 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | CDS | 29538040 | 29538255 | 29538040 | ID=Msa0247400-mRNA-1:cds;Parent=Msa0247400-mRNA-1 |
| chr2_2 | three_prime_UTR | 29537727 | 29538039 | 29537727 | ID=Msa0247400-mRNA-1:three_prime_utr;Parent=Msa0247400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
