Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204250 | XP_024632581.1 | 98.448 | 902 | 13 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204250 | A0A396JB28 | 98.448 | 902 | 13 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1865 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005620 | Msa0204250 | 0.844104 | 9.292283e-59 | -8.615850e-47 |
| Msa0028340 | Msa0204250 | 0.800321 | 1.522728e-48 | -8.615850e-47 |
| Msa0037120 | Msa0204250 | 0.827180 | 1.803940e-54 | -8.615850e-47 |
| Msa0043500 | Msa0204250 | 0.820938 | 5.264738e-53 | -8.615850e-47 |
| Msa0043650 | Msa0204250 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
| Msa0045340 | Msa0204250 | 0.841808 | 3.795567e-58 | -8.615850e-47 |
| Msa0054820 | Msa0204250 | 0.848536 | 5.756336e-60 | -8.615850e-47 |
| Msa0056450 | Msa0204250 | 0.824764 | 6.762900e-54 | -8.615850e-47 |
| Msa0064110 | Msa0204250 | 0.810618 | 1.053951e-50 | -8.615850e-47 |
| Msa0064920 | Msa0204250 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa0076170 | Msa0204250 | 0.817511 | 3.175081e-52 | -8.615850e-47 |
| Msa0084340 | Msa0204250 | 0.828272 | 9.859641e-55 | -8.615850e-47 |
| Msa0089980 | Msa0204250 | 0.843618 | 1.254089e-58 | -8.615850e-47 |
| Msa0090010 | Msa0204250 | 0.842211 | 2.969111e-58 | -8.615850e-47 |
| Msa0092440 | Msa0204250 | 0.801420 | 9.080026e-49 | -8.615850e-47 |
| Msa0096580 | Msa0204250 | 0.830699 | 2.535376e-55 | -8.615850e-47 |
| Msa0100160 | Msa0204250 | 0.823327 | 1.470227e-53 | -8.615850e-47 |
| Msa0115560 | Msa0204250 | 0.826473 | 2.660758e-54 | -8.615850e-47 |
| Msa0124200 | Msa0204250 | 0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa0131290 | Msa0204250 | 0.827269 | 1.717142e-54 | -8.615850e-47 |
| Msa0138210 | Msa0204250 | 0.800462 | 1.425261e-48 | -8.615850e-47 |
| Msa0143850 | Msa0204250 | 0.826437 | 2.714623e-54 | -8.615850e-47 |
| Msa0167850 | Msa0204250 | 0.831436 | 1.671582e-55 | -8.615850e-47 |
| Msa0168570 | Msa0204250 | 0.820611 | 6.261275e-53 | -8.615850e-47 |
| Msa0171200 | Msa0204250 | 0.850263 | 1.901099e-60 | -8.615850e-47 |
| Msa0177170 | Msa0204250 | 0.814118 | 1.812964e-51 | -8.615850e-47 |
| Msa0183420 | Msa0204250 | 0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0204250 | Msa0219850 | 0.804563 | 2.034813e-49 | -8.615850e-47 |
| Msa0204250 | Msa0227190 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0204250 | Msa0227230 | 0.807592 | 4.689349e-50 | -8.615850e-47 |
| Msa0204250 | Msa0232340 | 0.800566 | 1.357033e-48 | -8.615850e-47 |
| Msa0204250 | Msa0237200 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0204250 | Msa0245860 | 0.801949 | 7.072296e-49 | -8.615850e-47 |
| Msa0204250 | Msa0247400 | 0.906683 | 1.141595e-80 | -8.615850e-47 |
| Msa0204250 | Msa0271790 | 0.816905 | 4.345088e-52 | -8.615850e-47 |
| Msa0204250 | Msa0274970 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0204250 | Msa0280150 | 0.824341 | 8.506784e-54 | -8.615850e-47 |
| Msa0204250 | Msa0315680 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0204250 | Msa0317740 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
| Msa0204250 | Msa0320800 | 0.812340 | 4.454480e-51 | -8.615850e-47 |
| Msa0204250 | Msa0324890 | 0.829379 | 5.320722e-55 | -8.615850e-47 |
| Msa0204250 | Msa0347950 | 0.811071 | 8.408011e-51 | -8.615850e-47 |
| Msa0204250 | Msa0347990 | 0.816890 | 4.379163e-52 | -8.615850e-47 |
| Msa0204250 | Msa0358400 | 0.803086 | 4.122034e-49 | -8.615850e-47 |
| Msa0204250 | Msa0367740 | 0.821182 | 4.624892e-53 | -8.615850e-47 |
| Msa0204250 | Msa0377440 | 0.829898 | 3.978704e-55 | -8.615850e-47 |
| Msa0204250 | Msa0378970 | 0.802765 | 4.802564e-49 | -8.615850e-47 |
| Msa0204250 | Msa0379610 | 0.844133 | 9.127460e-59 | -8.615850e-47 |
| Msa0204250 | Msa0379990 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0204250 | Msa0387050 | 0.801136 | 1.038138e-48 | -8.615850e-47 |
| Msa0204250 | Msa0415530 | 0.820075 | 8.306088e-53 | -8.615850e-47 |
| Msa0204250 | Msa0423840 | 0.836307 | 1.010317e-56 | -8.615850e-47 |
| Msa0204250 | Msa0428580 | 0.805762 | 1.141704e-49 | -8.615850e-47 |
| Msa0204250 | Msa0428970 | 0.814841 | 1.254532e-51 | -8.615850e-47 |
| Msa0204250 | Msa0432170 | 0.833743 | 4.475623e-56 | -8.615850e-47 |
| Msa0204250 | Msa0450360 | 0.825538 | 4.439264e-54 | -8.615850e-47 |
| Msa0204250 | Msa0460700 | 0.804356 | 2.247303e-49 | -8.615850e-47 |
| Msa0204250 | Msa0473980 | 0.823472 | 1.359978e-53 | -8.615850e-47 |
| Msa0204250 | Msa0474940 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa0204250 | Msa0475450 | 0.803419 | 3.517859e-49 | -8.615850e-47 |
| Msa0204250 | Msa0476690 | 0.830640 | 2.621438e-55 | -8.615850e-47 |
| Msa0204250 | Msa0480780 | 0.807015 | 6.213967e-50 | -8.615850e-47 |
| Msa0204250 | Msa0515710 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
| Msa0204250 | Msa0517650 | 0.840524 | 8.257319e-58 | -8.615850e-47 |
| Msa0204250 | Msa0521020 | 0.817401 | 3.360742e-52 | -8.615850e-47 |
| Msa0204250 | Msa0544730 | 0.804853 | 1.769243e-49 | -8.615850e-47 |
| Msa0204250 | Msa0556280 | 0.823832 | 1.119975e-53 | -8.615850e-47 |
| Msa0204250 | Msa0559500 | 0.807779 | 4.277558e-50 | -8.615850e-47 |
| Msa0204250 | Msa0613710 | 0.816859 | 4.451003e-52 | -8.615850e-47 |
| Msa0204250 | Msa0624680 | 0.803710 | 3.061550e-49 | -8.615850e-47 |
| Msa0204250 | Msa0629430 | 0.819383 | 1.195705e-52 | -8.615850e-47 |
| Msa0204250 | Msa0648830 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0204250 | Msa0651830 | 0.845375 | 4.223271e-59 | -8.615850e-47 |
| Msa0204250 | Msa0652690 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0204250 | Msa0661320 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
| Msa0204250 | Msa0662550 | 0.835747 | 1.401808e-56 | -8.615850e-47 |
| Msa0204250 | Msa0689760 | 0.836488 | 9.084837e-57 | -8.615850e-47 |
| Msa0204250 | Msa0691340 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0204250 | Msa0694330 | 0.814847 | 1.250506e-51 | -8.615850e-47 |
| Msa0204250 | Msa0716860 | 0.835868 | 1.306322e-56 | -8.615850e-47 |
| Msa0204250 | Msa0757800 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa0204250 | Msa0780280 | 0.816150 | 6.415685e-52 | -8.615850e-47 |
| Msa0204250 | Msa0821800 | 0.811864 | 5.657258e-51 | -8.615850e-47 |
| Msa0204250 | Msa0861830 | 0.800521 | 1.386220e-48 | -8.615850e-47 |
| Msa0204250 | Msa0868160 | 0.815547 | 8.740120e-52 | -8.615850e-47 |
| Msa0204250 | Msa0905590 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
| Msa0204250 | Msa0909770 | 0.830558 | 2.745235e-55 | -8.615850e-47 |
| Msa0204250 | Msa0932350 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0204250 | Msa0937430 | 0.813050 | 3.114266e-51 | -8.615850e-47 |
| Msa0204250 | Msa0945240 | 0.808087 | 3.678650e-50 | -8.615850e-47 |
| Msa0204250 | Msa0969330 | 0.824417 | 8.165702e-54 | -8.615850e-47 |
| Msa0204250 | Msa0983770 | 0.831564 | 1.554153e-55 | -8.615850e-47 |
| Msa0204250 | Msa1010070 | 0.824144 | 9.465984e-54 | -8.615850e-47 |
| Msa0204250 | Msa1127430 | 0.808268 | 3.366979e-50 | -8.615850e-47 |
| Msa0204250 | Msa1143710 | 0.852408 | 4.708006e-61 | -8.615850e-47 |
| Msa0204250 | Msa1177930 | 0.845191 | 4.735816e-59 | -8.615850e-47 |
| Msa0204250 | Msa1211340 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0204250 | Msa1214160 | 0.811983 | 5.327755e-51 | -8.615850e-47 |
| Msa0204250 | Msa1220940 | 0.825971 | 3.503667e-54 | -8.615850e-47 |
| Msa0204250 | Msa1259640 | 0.806149 | 9.461981e-50 | -8.615850e-47 |
| Msa0204250 | Msa1329790 | 0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0204250 | Msa1333730 | 0.815835 | 7.542783e-52 | -8.615850e-47 |
| Msa0204250 | Msa1359560 | 0.816469 | 5.441160e-52 | -8.615850e-47 |
| Msa0204250 | Msa1366550 | 0.816134 | 6.465766e-52 | -8.615850e-47 |
| Msa0204250 | Msa1369090 | 0.834082 | 3.681450e-56 | -8.615850e-47 |
| Msa0204250 | Msa1372290 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0204250 | Msa1393820 | 0.830277 | 3.215516e-55 | -8.615850e-47 |
| Msa0204250 | Msa1420250 | 0.835388 | 1.727822e-56 | -8.615850e-47 |
| Msa0204250 | Msa1431170 | 0.844134 | 9.125961e-59 | -8.615850e-47 |
| Msa0204250 | Msa1438520 | 0.849093 | 4.033554e-60 | -8.615850e-47 |
| Msa0204250 | Msa1446780 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa0204250 | Msa1463030 | 0.827095 | 1.889819e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204250 | MtrunA17_Chr2g0302451 | 98.448 | 902 | 13 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1865 |
| Msa0204250 | MtrunA17_Chr3g0112101 | 31.564 | 716 | 462 | 11 | 120 | 819 | 4 | 707 | 9.99e-111 | 358 |
| Msa0204250 | MtrunA17_Chr3g0126261 | 33.603 | 494 | 322 | 6 | 309 | 800 | 22 | 511 | 8.38e-91 | 299 |
| Msa0204250 | MtrunA17_Chr6g0454061 | 35.603 | 514 | 312 | 6 | 300 | 807 | 69 | 569 | 1.01e-87 | 292 |
| Msa0204250 | MtrunA17_Chr6g0455641 | 33.865 | 502 | 324 | 5 | 300 | 798 | 68 | 564 | 1.22e-87 | 292 |
| Msa0204250 | MtrunA17_Chr6g0454051 | 34.047 | 514 | 320 | 6 | 300 | 807 | 124 | 624 | 1.35e-82 | 280 |
| Msa0204250 | MtrunA17_Chr6g0454041 | 31.066 | 647 | 375 | 13 | 149 | 791 | 85 | 664 | 2.89e-79 | 272 |
| Msa0204250 | MtrunA17_Chr6g0476101 | 36.330 | 267 | 169 | 1 | 423 | 689 | 17 | 282 | 8.13e-54 | 189 |
| Msa0204250 | MtrunA17_Chr4g0010371 | 30.303 | 99 | 68 | 1 | 668 | 765 | 2 | 100 | 3.55e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204250 | AT3G17450.2 | 56.331 | 845 | 337 | 12 | 1 | 829 | 1 | 829 | 0.0 | 969 |
| Msa0204250 | AT3G17450.1 | 56.331 | 845 | 337 | 12 | 1 | 829 | 1 | 829 | 0.0 | 969 |
| Msa0204250 | AT4G15020.2 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 2.58e-105 | 344 |
| Msa0204250 | AT4G15020.1 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 2.58e-105 | 344 |
| Msa0204250 | AT3G22220.3 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 4.01e-103 | 338 |
| Msa0204250 | AT3G22220.4 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 4.01e-103 | 338 |
| Msa0204250 | AT3G22220.2 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 4.01e-103 | 338 |
| Msa0204250 | AT3G22220.1 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 4.01e-103 | 338 |
| Msa0204250 | AT1G79740.1 | 29.550 | 511 | 346 | 6 | 309 | 819 | 111 | 607 | 2.19e-77 | 265 |
| Msa0204250 | AT1G79740.4 | 29.550 | 511 | 346 | 6 | 309 | 819 | 111 | 607 | 2.19e-77 | 265 |
| Msa0204250 | AT1G79740.3 | 29.303 | 488 | 331 | 6 | 332 | 819 | 1 | 474 | 3.95e-74 | 253 |
| Msa0204250 | AT1G79740.2 | 29.303 | 488 | 331 | 6 | 332 | 819 | 1 | 474 | 3.95e-74 | 253 |
| Msa0204250 | AT3G13020.1 | 26.426 | 666 | 410 | 18 | 137 | 793 | 10 | 604 | 6.27e-69 | 241 |
| Msa0204250 | AT3G13030.3 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.36e-59 | 211 |
| Msa0204250 | AT3G13030.4 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.36e-59 | 211 |
| Msa0204250 | AT3G13030.1 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.36e-59 | 211 |
| Msa0204250 | AT3G13030.2 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.36e-59 | 211 |
| Msa0204250 | AT3G13010.1 | 28.398 | 493 | 324 | 12 | 310 | 793 | 99 | 571 | 2.40e-54 | 199 |
| Msa0204250 | AT3G13030.5 | 28.092 | 477 | 296 | 10 | 319 | 790 | 62 | 496 | 5.62e-51 | 187 |
| Msa0204250 | AT5G33406.1 | 28.530 | 347 | 235 | 4 | 511 | 856 | 1 | 335 | 1.42e-44 | 169 |
| Msa0204250 | AT1G43260.1 | 33.333 | 225 | 148 | 2 | 318 | 541 | 47 | 270 | 1.46e-37 | 143 |
| Msa0204250 | AT5G31412.1 | 37.879 | 132 | 80 | 1 | 353 | 484 | 110 | 239 | 1.02e-20 | 96.7 |
| Msa0204250 | AT1G36095.1 | 31.176 | 170 | 116 | 1 | 412 | 581 | 131 | 299 | 3.26e-20 | 92.8 |
Find 217 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTCTCAACGCTGGTTC+TGG | 0.154626 | 2_1:-29186391 | None:intergenic |
| CAGCATTTAGCCCGAGTTTC+TGG | 0.174313 | 2_1:+29185734 | Msa0204250:CDS |
| CCCATCCAGCCAACTTATTT+CGG | 0.211422 | 2_1:+29186636 | Msa0204250:CDS |
| TTCAGCAAGATAATTCTTAA+TGG | 0.235713 | 2_1:-29186686 | None:intergenic |
| ACTATGTTCATTTCATCTAT+TGG | 0.240523 | 2_1:+29189861 | Msa0204250:three_prime_UTR |
| CAGTTGTGGGCCTGTATTAT+TGG | 0.241415 | 2_1:+29189794 | Msa0204250:three_prime_UTR |
| ATTAGAGGACATTCCCTTAA+AGG | 0.245359 | 2_1:-29186362 | None:intergenic |
| ACAACATTTGGCTAGGATTC+CGG | 0.260414 | 2_1:+29186099 | Msa0204250:CDS |
| CCATCCAGCCAACTTATTTC+GGG | 0.265939 | 2_1:+29186637 | Msa0204250:CDS |
| AACATATTTATTTAAGCTTT+TGG | 0.267928 | 2_1:+29186861 | Msa0204250:CDS |
| GGCGGTGGAGATAGAGTTTC+AGG | 0.272902 | 2_1:-29183960 | None:intergenic |
| GAATTATCTTGCTGAATATA+AGG | 0.282596 | 2_1:+29186693 | Msa0204250:CDS |
| CATTAACTTTCTTCTGTGAT+AGG | 0.284701 | 2_1:-29188301 | None:intergenic |
| AGATACAGGAAAGACCTTTA+AGG | 0.304417 | 2_1:+29186348 | Msa0204250:CDS |
| GTGAGTTGGGGTTGAATTAC+TGG | 0.306734 | 2_1:-29183878 | None:intergenic |
| CTCTTTCCCCTGGCTTGAAC+TGG | 0.307893 | 2_1:-29187391 | None:intergenic |
| CAACATTTGGCTAGGATTCC+GGG | 0.313749 | 2_1:+29186100 | Msa0204250:CDS |
| AACTAATATACAATCAAATA+TGG | 0.313840 | 2_1:+29187205 | Msa0204250:CDS |
| CACGGAAATATGAGCCATTC+TGG | 0.321607 | 2_1:+29187595 | Msa0204250:CDS |
| AAAGGAGAAGGAATTTGTTC+TGG | 0.322409 | 2_1:+29187085 | Msa0204250:CDS |
| GAAAAGCTGGGATATATAAA+AGG | 0.325977 | 2_1:+29190013 | Msa0204250:three_prime_UTR |
| ATCTTCTCAACGCTGGTTCT+GGG | 0.327767 | 2_1:-29186390 | None:intergenic |
| TTGCTGAATATAAGGCTTCC+TGG | 0.330441 | 2_1:+29186701 | Msa0204250:CDS |
| TAATAGATTTAAACAACATT+TGG | 0.335959 | 2_1:+29186087 | Msa0204250:CDS |
| TTAGAAAACAACCTCAAGTA+TGG | 0.338397 | 2_1:-29184009 | None:intergenic |
| GAATGTTTCTTTCAAACAAA+TGG | 0.339612 | 2_1:+29187352 | Msa0204250:CDS |
| AGATGACTTTGGAACTGAAT+TGG | 0.347315 | 2_1:+29188004 | Msa0204250:CDS |
| CTGGAATTGGCTGGTCAATA+TGG | 0.351924 | 2_1:+29186598 | Msa0204250:CDS |
| TTCCCAGCAGCTTTATAGTT+AGG | 0.352395 | 2_1:-29187051 | None:intergenic |
| GTTCGGTTGTTGACGAAAAT+CGG | 0.352536 | 2_1:-29183910 | None:intergenic |
| TGCTACATTGCAGAATTTGT+TGG | 0.356863 | 2_1:+29187308 | Msa0204250:CDS |
| GATACAGGAAAGACCTTTAA+GGG | 0.362013 | 2_1:+29186349 | Msa0204250:CDS |
| AATCACTGGTTGTTCGATAA+TGG | 0.364280 | 2_1:+29186726 | Msa0204250:CDS |
| GAGAATGCCAAGTAAGAAAA+AGG | 0.364495 | 2_1:+29188357 | Msa0204250:CDS |
| AAACAAAATCTTGACGATAT+CGG | 0.369198 | 2_1:-29187695 | None:intergenic |
| ATTGTGGAGGAATAAGGATT+TGG | 0.371031 | 2_1:+29189767 | Msa0204250:three_prime_UTR |
| CTTGCAATCAAATCTATTCA+TGG | 0.376674 | 2_1:+29187564 | Msa0204250:CDS |
| TCTTACAATAAATATATCAT+TGG | 0.380029 | 2_1:-29189906 | None:intergenic |
| TTCCAATGAGCTGGTTACTA+TGG | 0.382722 | 2_1:+29189622 | Msa0204250:CDS |
| TTAACTCCTCTTCGGTCCTT+AGG | 0.382982 | 2_1:+29185968 | Msa0204250:CDS |
| TCATCTTCATTATCAGACTT+TGG | 0.384649 | 2_1:-29186247 | None:intergenic |
| GACAAAGTAGTGGAAGAAAT+AGG | 0.386856 | 2_1:+29186883 | Msa0204250:CDS |
| AAGCTTTGATTGATAATGAT+AGG | 0.396713 | 2_1:+29186314 | Msa0204250:CDS |
| GTTGATCCTGGTTGGGATCA+TGG | 0.396999 | 2_1:+29185629 | Msa0204250:CDS |
| GAATTGCGATAGCTCTCATT+TGG | 0.397246 | 2_1:+29185574 | Msa0204250:five_prime_UTR |
| AGGATTTGTTGATCCTGGTT+GGG | 0.401216 | 2_1:+29185622 | Msa0204250:CDS |
| CAGGATTTGTTGATCCTGGT+TGG | 0.401261 | 2_1:+29185621 | Msa0204250:CDS |
| TGCATCTTCAACTACATTAG+TGG | 0.404393 | 2_1:-29186839 | None:intergenic |
| TCGGTTAGGAATCGTGAGTT+GGG | 0.410391 | 2_1:-29183891 | None:intergenic |
| TTATCAGACTTTGGATAGAA+AGG | 0.411222 | 2_1:-29186238 | None:intergenic |
| TCCACAGGATTTGTTGATCC+TGG | 0.414673 | 2_1:+29185617 | Msa0204250:CDS |
| TGGTTCTGGGCTAGTATTAG+AGG | 0.417393 | 2_1:-29186377 | None:intergenic |
| TCAAACTTGCAAACAACTAA+AGG | 0.417490 | 2_1:+29186459 | Msa0204250:CDS |
| CATAAAATGCTGGAATTGGC+TGG | 0.424079 | 2_1:+29186589 | Msa0204250:CDS |
| CACAGGGAAGCCAATAATAC+AGG | 0.429876 | 2_1:-29189804 | None:intergenic |
| GATCCAGATCGAAGTGGAAT+CGG | 0.435638 | 2_1:-29183981 | None:intergenic |
| CAATAATACAGGCCCACAAC+TGG | 0.436114 | 2_1:-29189793 | None:intergenic |
| AATTCAGCTCAAGATGACTT+TGG | 0.436462 | 2_1:+29187993 | Msa0204250:CDS |
| CCGAAATAAGTTGGCTGGAT+GGG | 0.437278 | 2_1:-29186636 | None:intergenic |
| ACTCCTAACTATAAAGCTGC+TGG | 0.439048 | 2_1:+29187048 | Msa0204250:CDS |
| ATGTATATAACGACTTGTAC+AGG | 0.442939 | 2_1:+29187535 | Msa0204250:CDS |
| TACAAGTCGTTATATACATA+TGG | 0.444904 | 2_1:-29187531 | None:intergenic |
| GAAGCACACTGGGTGCCAGC+TGG | 0.445938 | 2_1:-29187279 | None:intergenic |
| TGTAGAAGAGTGCATGGAAA+AGG | 0.446118 | 2_1:+29187167 | Msa0204250:CDS |
| TCATCTAGATCAACACCAAA+AGG | 0.447915 | 2_1:-29189539 | None:intergenic |
| CTGGCTTGAACTGGAGAACC+TGG | 0.450018 | 2_1:-29187382 | None:intergenic |
| TTCCTTGCGTAATTTCTTAG+TGG | 0.450982 | 2_1:-29186494 | None:intergenic |
| AAGACGATGAAGAGCAAGTT+GGG | 0.451975 | 2_1:+29185894 | Msa0204250:CDS |
| AGGATTTGGTTGCCAGTTGT+GGG | 0.457361 | 2_1:+29189781 | Msa0204250:three_prime_UTR |
| CTGTAAATTTAACTCCTCTT+CGG | 0.460622 | 2_1:+29185960 | Msa0204250:CDS |
| AGCCATAGTAACCAGCTCAT+TGG | 0.461570 | 2_1:-29189624 | None:intergenic |
| ACAAATCCTGTGGAGCGTAT+TGG | 0.462386 | 2_1:-29185608 | None:intergenic |
| AAGGATTTGGTTGCCAGTTG+TGG | 0.462411 | 2_1:+29189780 | Msa0204250:three_prime_UTR |
| CAAACAAATGGATGTCATCC+AGG | 0.463821 | 2_1:+29187364 | Msa0204250:CDS |
| TCGACGGCGGCGGAATCGTT+CGG | 0.465232 | 2_1:-29183927 | None:intergenic |
| CAGGTTCTCCAGTTCAAGCC+AGG | 0.466832 | 2_1:+29187383 | Msa0204250:CDS |
| GCAGATCATGCTAACATTGA+TGG | 0.469084 | 2_1:+29189671 | Msa0204250:CDS |
| TTACAAGGTGCTACCTCTCC+CGG | 0.469285 | 2_1:-29186118 | None:intergenic |
| GTTCGATAATGGCTGATAGT+TGG | 0.469340 | 2_1:+29186737 | Msa0204250:CDS |
| TGGATCTTCTTCCATACTTG+AGG | 0.471171 | 2_1:+29183998 | Msa0204250:five_prime_UTR |
| AGGAGATACTGTAAAGATAC+AGG | 0.472813 | 2_1:+29186334 | Msa0204250:CDS |
| TTTCTTGTTTCATCTCCTCA+TGG | 0.477086 | 2_1:+29186790 | Msa0204250:CDS |
| GTGGGAACACGGTGTTGCTC+AGG | 0.477649 | 2_1:+29186006 | Msa0204250:CDS |
| AAGCAAAGGAAAGCAATTGA+TGG | 0.478129 | 2_1:+29185922 | Msa0204250:CDS |
| TTACCTCACTAGCTGCTTGG+TGG | 0.478382 | 2_1:+29188147 | Msa0204250:intron |
| GTTTGAAGATTCTGATTTGT+GGG | 0.479122 | 2_1:-29186442 | None:intergenic |
| TACTGTGAGAAAGTTGTTAG+TGG | 0.482355 | 2_1:+29186058 | Msa0204250:CDS |
| GTTGTTGACGAAAATCGGTT+AGG | 0.484609 | 2_1:-29183905 | None:intergenic |
| TCCTTGCGTAATTTCTTAGT+GGG | 0.485270 | 2_1:-29186493 | None:intergenic |
| TAGCTCTCATTTGGATGTAA+TGG | 0.485369 | 2_1:+29185583 | Msa0204250:exon |
| TTTGGCTAGGATTCCGGGAG+AGG | 0.486181 | 2_1:+29186105 | Msa0204250:CDS |
| ACATAGGCAACCCGAGGGTA+AGG | 0.487674 | 2_1:+29186207 | Msa0204250:CDS |
| CCGCCGATTCCACTTCGATC+TGG | 0.488168 | 2_1:+29183978 | Msa0204250:five_prime_UTR |
| TGATAGTTGGAGAGATGCAC+AGG | 0.488405 | 2_1:+29186750 | Msa0204250:CDS |
| TTGGCAATTAGCACAAGAAC+AGG | 0.492641 | 2_1:+29188023 | Msa0204250:CDS |
| CATATTGCAAGTGTTTCAAA+AGG | 0.493903 | 2_1:+29187482 | Msa0204250:CDS |
| AGATGACGAGTATGAGCAGC+AGG | 0.496541 | 2_1:+29186264 | Msa0204250:CDS |
| TGGATCTGAAAGGCATCTAA+AGG | 0.499713 | 2_1:+29189598 | Msa0204250:CDS |
| TGAAGTAACATACTGTGAAA+AGG | 0.499819 | 2_1:+29185757 | Msa0204250:CDS |
| GCAACACCGTGTTCCCACCC+TGG | 0.504664 | 2_1:-29186001 | None:intergenic |
| CTGTCTATCACCTTCCAGAA+TGG | 0.505410 | 2_1:-29187609 | None:intergenic |
| GCGACCCGAAATAAGTTGGC+TGG | 0.508113 | 2_1:-29186641 | None:intergenic |
| AGATTTAGCTGTGTTTGTCA+TGG | 0.508667 | 2_1:+29189987 | Msa0204250:three_prime_UTR |
| TGCTGAATATAAGGCTTCCT+GGG | 0.512753 | 2_1:+29186702 | Msa0204250:CDS |
| AAATAAAAGAGAATATGAAA+TGG | 0.513526 | 2_1:+29186167 | Msa0204250:CDS |
| GATCGAAGTGGAATCGGCGG+TGG | 0.515102 | 2_1:-29183975 | None:intergenic |
| CTCCTAACTATAAAGCTGCT+GGG | 0.516115 | 2_1:+29187049 | Msa0204250:CDS |
| CGCGCCGGGTCGAGTTAAGA+AGG | 0.516679 | 2_1:+29183849 | None:intergenic |
| ATCGGTTAGGAATCGTGAGT+TGG | 0.518326 | 2_1:-29183892 | None:intergenic |
| AGGTGAAGAAAATGTAGTGC+AGG | 0.518522 | 2_1:+29186903 | Msa0204250:CDS |
| AAGTAAGCAGCCAAGTAAAG+AGG | 0.521409 | 2_1:-29187657 | None:intergenic |
| GGATCTGAAAGGCATCTAAA+GGG | 0.523160 | 2_1:+29189599 | Msa0204250:CDS |
| GATTCAATAGACTATGATGA+TGG | 0.524240 | 2_1:+29189578 | Msa0204250:CDS |
| GGAGATAGAGTTTCAGGCGG+TGG | 0.525689 | 2_1:-29183954 | None:intergenic |
| CAGTTCAAGCCAGGGGAAAG+AGG | 0.525879 | 2_1:+29187392 | Msa0204250:CDS |
| ATGAAAAGTGAATTTACCCA+TGG | 0.526104 | 2_1:+29187240 | Msa0204250:CDS |
| GAAAGCAATTGATGGATGGC+AGG | 0.527166 | 2_1:+29185930 | Msa0204250:CDS |
| TACTGTGGGAAAGTTGTTAG+TGG | 0.528153 | 2_1:+29185692 | Msa0204250:CDS |
| GTCTGAATGAATGCATTGTT+CGG | 0.528690 | 2_1:+29187828 | Msa0204250:CDS |
| CAACACCGTGTTCCCACCCT+GGG | 0.529812 | 2_1:-29186000 | None:intergenic |
| AACATACTGTGAAAAGGCTC+CGG | 0.529848 | 2_1:+29185763 | Msa0204250:CDS |
| AGTTTGAAGATTCTGATTTG+TGG | 0.530141 | 2_1:-29186443 | None:intergenic |
| ACAGAGTCTGCAGCTTGTAA+AGG | 0.530270 | 2_1:-29186559 | None:intergenic |
| AAGGCTTCCTGGGCAATCAC+TGG | 0.530608 | 2_1:+29186712 | Msa0204250:CDS |
| CATCTAGATCAACACCAAAA+GGG | 0.531085 | 2_1:-29189538 | None:intergenic |
| CATTCTGGAAGGTGATAGAC+AGG | 0.532154 | 2_1:+29187610 | Msa0204250:CDS |
| ATGTTACTTCACCAGAAACT+CGG | 0.532770 | 2_1:-29185745 | None:intergenic |
| CAGATCCGACTCATCGTCAC+TGG | 0.533981 | 2_1:-29189696 | None:intergenic |
| CCCGAAATAAGTTGGCTGGA+TGG | 0.536151 | 2_1:-29186637 | None:intergenic |
| GATTTAAACAACATTTGGCT+AGG | 0.537741 | 2_1:+29186092 | Msa0204250:CDS |
| GCTTTAGAAGCTCATTCCCA+TGG | 0.538107 | 2_1:-29187257 | None:intergenic |
| CTGGGAAAATGCTTGAAGAA+AGG | 0.538331 | 2_1:+29187067 | Msa0204250:CDS |
| CCCTGGGTCAACATATCCTA+AGG | 0.538425 | 2_1:-29185984 | None:intergenic |
| AAAAGCGACCCGAAATAAGT+TGG | 0.544977 | 2_1:-29186645 | None:intergenic |
| CAAGTTGGGTGTAGAAGCAA+AGG | 0.546966 | 2_1:+29185908 | Msa0204250:CDS |
| CGGTGGAAGATCGACGGCGG+CGG | 0.550645 | 2_1:-29183937 | None:intergenic |
| GAGCTGGTTACTATGGCTGA+TGG | 0.551004 | 2_1:+29189629 | Msa0204250:CDS |
| GGCATCAGATCCTTACCCTC+GGG | 0.551027 | 2_1:-29186217 | None:intergenic |
| AATATGAAATGGCATCGCAC+TGG | 0.551192 | 2_1:+29186178 | Msa0204250:CDS |
| ACAACATGGAATAAGTTGCT+TGG | 0.551673 | 2_1:+29188172 | Msa0204250:CDS |
| TCCTTAGGATATGTTGACCC+AGG | 0.553110 | 2_1:+29185983 | Msa0204250:CDS |
| AAGAGCACTTACTTGCTGAC+TGG | 0.555352 | 2_1:+29188420 | Msa0204250:CDS |
| TAGATGTGTAGAAGAGTGCA+TGG | 0.555568 | 2_1:+29187161 | Msa0204250:CDS |
| TTTGTCATGGAAAGAAAAGC+TGG | 0.557149 | 2_1:+29190000 | Msa0204250:three_prime_UTR |
| TCTAAAGGGTTCCAATGAGC+TGG | 0.557230 | 2_1:+29189613 | Msa0204250:CDS |
| TGTGGGAAAGTTGTTAGTGG+TGG | 0.558139 | 2_1:+29185695 | Msa0204250:CDS |
| GTAGAAGAGTGCATGGAAAA+GGG | 0.564298 | 2_1:+29187168 | Msa0204250:CDS |
| TGGTCAATATGGACAAGGAC+TGG | 0.565647 | 2_1:+29186609 | Msa0204250:CDS |
| CTATTCATGGCGATGATGCA+CGG | 0.567695 | 2_1:+29187577 | Msa0204250:CDS |
| ATGGCTCCAATACGCTCCAC+AGG | 0.568838 | 2_1:+29185602 | Msa0204250:CDS |
| AGGCATCAGATCCTTACCCT+CGG | 0.574066 | 2_1:-29186218 | None:intergenic |
| GAGTGAGTAATCAAGTTACA+AGG | 0.574681 | 2_1:+29189739 | Msa0204250:exon |
| CTTTAGAAGCTCATTCCCAT+GGG | 0.577632 | 2_1:-29187256 | None:intergenic |
| AATCTTGATCTTCTCAACGC+TGG | 0.579689 | 2_1:-29186397 | None:intergenic |
| TCATTTCATCTATTGGAGCA+TGG | 0.579898 | 2_1:+29189868 | Msa0204250:three_prime_UTR |
| ACCACTGCACAAAGCTCTGA+TGG | 0.580910 | 2_1:+29188452 | Msa0204250:CDS |
| AATGAGCTTCTAAAGCCAGC+TGG | 0.582059 | 2_1:+29187264 | Msa0204250:CDS |
| AAACAACTAAAGGTTAAGAC+AGG | 0.582514 | 2_1:+29186469 | Msa0204250:CDS |
| GGAAGAAAATGCAGTATGTG+AGG | 0.583624 | 2_1:+29187445 | Msa0204250:CDS |
| AAATGCTTGAAGAAAGGAGA+AGG | 0.584761 | 2_1:+29187073 | Msa0204250:CDS |
| AAAATGAAGGAAAATCTGGA+AGG | 0.590836 | 2_1:+29185800 | Msa0204250:CDS |
| AGCAAAGCTAGAAGCACACT+GGG | 0.592642 | 2_1:-29187289 | None:intergenic |
| AGGTTAGATGCAATTACTGT+GGG | 0.594300 | 2_1:+29185678 | Msa0204250:CDS |
| TGTTACTTCACCAGAAACTC+GGG | 0.594532 | 2_1:-29185744 | None:intergenic |
| ACTATGGCTGATGGAGCAGT+AGG | 0.594939 | 2_1:+29189638 | Msa0204250:CDS |
| TAGCAAAGCTAGAAGCACAC+TGG | 0.595235 | 2_1:-29187290 | None:intergenic |
| TCTTGAGCTGAATTATAATG+AGG | 0.598079 | 2_1:-29187984 | None:intergenic |
| ACCATCAGAGCTTTGTGCAG+TGG | 0.599060 | 2_1:-29188453 | None:intergenic |
| AAAGGAAAGCAATTGATGGA+TGG | 0.603413 | 2_1:+29185926 | Msa0204250:CDS |
| TTCAGGCGGTGGAAGATCGA+CGG | 0.605865 | 2_1:-29183943 | None:intergenic |
| AGGTTCTCCAGTTCAAGCCA+GGG | 0.607330 | 2_1:+29187384 | Msa0204250:CDS |
| CGGTTAGGAATCGTGAGTTG+GGG | 0.608849 | 2_1:-29183890 | None:intergenic |
| AGGATATGTTGACCCAGGGT+GGG | 0.611188 | 2_1:+29185988 | Msa0204250:CDS |
| GTTGACCCAGGGTGGGAACA+CGG | 0.611332 | 2_1:+29185995 | Msa0204250:CDS |
| TGAAAAGTGAATTTACCCAT+GGG | 0.616274 | 2_1:+29187241 | Msa0204250:CDS |
| ACAAAGCTCTGATGGTGACA+AGG | 0.616552 | 2_1:+29188460 | Msa0204250:CDS |
| TCTTGACGATATCGGTATGA+CGG | 0.616642 | 2_1:-29187687 | None:intergenic |
| CCTTAGGATATGTTGACCCA+GGG | 0.617378 | 2_1:+29185984 | Msa0204250:CDS |
| AAATGAAGGAAAATCTGGAA+GGG | 0.618504 | 2_1:+29185801 | Msa0204250:CDS |
| AAGGTTAGATGCAATTACTG+TGG | 0.618593 | 2_1:+29185677 | Msa0204250:CDS |
| TTGTAGAACATTCTCAGCAG+AGG | 0.619249 | 2_1:-29188399 | None:intergenic |
| GCTGCTTGGTGGCAACAACA+TGG | 0.620763 | 2_1:+29188158 | Msa0204250:intron |
| GAAATATGAGCCATTCTGGA+AGG | 0.621062 | 2_1:+29187599 | Msa0204250:CDS |
| GAAGACGATGAAGAGCAAGT+TGG | 0.621085 | 2_1:+29185893 | Msa0204250:CDS |
| TGAGTTGGGGTTGAATTACT+GGG | 0.621389 | 2_1:-29183877 | None:intergenic |
| TAGGATATGTTGACCCAGGG+TGG | 0.622379 | 2_1:+29185987 | Msa0204250:CDS |
| ACAAGAACAGGTCTTGAACC+AGG | 0.622503 | 2_1:+29188035 | Msa0204250:CDS |
| CGAACAACCAGTGATTGCCC+AGG | 0.630440 | 2_1:-29186719 | None:intergenic |
| GAAGAAGATCCAGATCGAAG+TGG | 0.635563 | 2_1:-29183987 | None:intergenic |
| TTGTCATGGAAAGAAAAGCT+GGG | 0.635762 | 2_1:+29190001 | Msa0204250:three_prime_UTR |
| GTTGGAGAGATGCACAGGGT+AGG | 0.638423 | 2_1:+29186755 | Msa0204250:CDS |
| ACCAGGATCAACAAATCCTG+TGG | 0.638687 | 2_1:-29185618 | None:intergenic |
| TGTGAGAAAGTTGTTAGTGG+CGG | 0.639509 | 2_1:+29186061 | Msa0204250:CDS |
| GTGTTTCAAAAGGTGTCTAG+TGG | 0.640607 | 2_1:+29187492 | Msa0204250:CDS |
| TGTCTGACTTAATATGCGAA+CGG | 0.644471 | 2_1:-29188210 | None:intergenic |
| TGTATATAACGACTTGTACA+GGG | 0.644698 | 2_1:+29187536 | Msa0204250:CDS |
| GCAATGCCATGATCCCAACC+AGG | 0.647244 | 2_1:-29185635 | None:intergenic |
| ATACTGTGAAAAGGCTCCGG+AGG | 0.649046 | 2_1:+29185766 | Msa0204250:CDS |
| ACCCACTAAGAAATTACGCA+AGG | 0.652287 | 2_1:+29186492 | Msa0204250:CDS |
| GTGGGAAAGTTGTTAGTGGT+GGG | 0.655583 | 2_1:+29185696 | Msa0204250:CDS |
| ATGGCATTGCTCAAGATGAG+CGG | 0.658795 | 2_1:+29185648 | Msa0204250:CDS |
| TGGTGCCAGTGACGATGAGT+CGG | 0.666465 | 2_1:+29189691 | Msa0204250:CDS |
| TACTTTGCATCATATGAACA+AGG | 0.667545 | 2_1:+29186291 | Msa0204250:CDS |
| GAAACAAAGTATACACCATG+AGG | 0.669038 | 2_1:-29186805 | None:intergenic |
| CCAGATCGAAGTGGAATCGG+CGG | 0.669399 | 2_1:-29183978 | None:intergenic |
| TTGGCTGGTCAATATGGACA+AGG | 0.674064 | 2_1:+29186604 | Msa0204250:CDS |
| GGTTCTCCAGTTCAAGCCAG+GGG | 0.675328 | 2_1:+29187385 | Msa0204250:CDS |
| AAAAGACATAGGCAACCCGA+GGG | 0.683630 | 2_1:+29186202 | Msa0204250:CDS |
| ACATATCCTAAGGACCGAAG+AGG | 0.686475 | 2_1:-29185974 | None:intergenic |
| AGGCGGTGGAAGATCGACGG+CGG | 0.706223 | 2_1:-29183940 | None:intergenic |
| TTTCATCTATTGGAGCATGG+TGG | 0.711455 | 2_1:+29189871 | Msa0204250:three_prime_UTR |
| TTAATACAATAGATAGCACA+AGG | 0.720093 | 2_1:-29187111 | None:intergenic |
| ACTATGATGATGGATCTGAA+AGG | 0.723341 | 2_1:+29189588 | Msa0204250:CDS |
| TAGCATTCTGATGTAGTACG+TGG | 0.728853 | 2_1:+29187806 | Msa0204250:intron |
| CTTGTAAAGGAATTCCTGCG+TGG | 0.735670 | 2_1:-29186546 | None:intergenic |
| GATAGTTGGAGAGATGCACA+GGG | 0.743814 | 2_1:+29186751 | Msa0204250:CDS |
| GGTGGAGATAGAGTTTCAGG+CGG | 0.754850 | 2_1:-29183957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTAATAATTAAATAATATA+AGG | + | chr2_1:29188678-29188697 | Msa0204250:intron | 10.0% |
| !!! | TATCTTTTTTATTTTTTAAG+GGG | - | chr2_1:29189438-29189457 | None:intergenic | 10.0% |
| !! | TATTAAGTAAATCAAAAGAT+TGG | + | chr2_1:29184770-29184789 | Msa0204250:intron | 15.0% |
| !!! | GTTGGTTTTTAAATTTATAT+GGG | + | chr2_1:29185008-29185027 | Msa0204250:intron | 15.0% |
| !!! | CTCTTATGTATTTTTTTTTA+AGG | + | chr2_1:29185350-29185369 | Msa0204250:intron | 15.0% |
| !! | TAATAGATTTAAACAACATT+TGG | + | chr2_1:29186087-29186106 | Msa0204250:CDS | 15.0% |
| !! | AAATAAAAGAGAATATGAAA+TGG | + | chr2_1:29186167-29186186 | Msa0204250:CDS | 15.0% |
| !!! | AACATATTTATTTAAGCTTT+TGG | + | chr2_1:29186861-29186880 | Msa0204250:CDS | 15.0% |
| !!! | ATATTAGTTTTGTAATTTTC+TGG | - | chr2_1:29187194-29187213 | None:intergenic | 15.0% |
| !! | AACTAATATACAATCAAATA+TGG | + | chr2_1:29187205-29187224 | Msa0204250:CDS | 15.0% |
| !!! | TAAACAAATTTTGACTTTTT+AGG | + | chr2_1:29188767-29188786 | Msa0204250:intron | 15.0% |
| !! | TTATTATATGTTGAAACTAT+TGG | + | chr2_1:29189316-29189335 | Msa0204250:intron | 15.0% |
| !! | TCTTACAATAAATATATCAT+TGG | - | chr2_1:29189909-29189928 | None:intergenic | 15.0% |
| !!! | AAAAGGAAATTTTGATTTTC+AGG | + | chr2_1:29184091-29184110 | Msa0204250:intron | 20.0% |
| !!! | TTTTGATTTTCAGGAAATTT+AGG | + | chr2_1:29184100-29184119 | Msa0204250:intron | 20.0% |
| !! | GAAATTTAGGTATTTGTATA+TGG | + | chr2_1:29184113-29184132 | Msa0204250:intron | 20.0% |
| !!! | TTTTTTACAATTAGGGTTTA+AGG | + | chr2_1:29184211-29184230 | Msa0204250:intron | 20.0% |
| !! | CGTACAAAATCATTAAATTA+CGG | - | chr2_1:29184559-29184578 | None:intergenic | 20.0% |
| !! | ATAAATTTAAAAACCAACCA+AGG | - | chr2_1:29185006-29185025 | None:intergenic | 20.0% |
| !!! | GGTTGGTTTTTAAATTTATA+TGG | + | chr2_1:29185007-29185026 | Msa0204250:intron | 20.0% |
| !! | ATACTTTGTTGACATTAAAA+AGG | - | chr2_1:29185299-29185318 | None:intergenic | 20.0% |
| !!! | ATTTTAAGATAAACTTCTTC+TGG | - | chr2_1:29186151-29186170 | None:intergenic | 20.0% |
| !!! | TGTATATTTTCATAAAATGC+TGG | + | chr2_1:29186579-29186598 | Msa0204250:CDS | 20.0% |
| !!! | TTTTTTCTTTTCTATTCTTG+TGG | + | chr2_1:29186936-29186955 | Msa0204250:intron | 20.0% |
| !! | CCATTAGAAAAATATTATTC+TGG | - | chr2_1:29187728-29187747 | None:intergenic | 20.0% |
| !!! | CCAGAATAATATTTTTCTAA+TGG | + | chr2_1:29187725-29187744 | Msa0204250:intron | 20.0% |
| !! | TATAAAACATATATAGTGCA+TGG | - | chr2_1:29188575-29188594 | None:intergenic | 20.0% |
| !!! | AATTTGTTTATAATAGTGAC+CGG | - | chr2_1:29188757-29188776 | None:intergenic | 20.0% |
| !! | AATACAAGTGTAATGAAAAA+AGG | + | chr2_1:29189059-29189078 | Msa0204250:intron | 20.0% |
| !!! | TTTTGATCAGTTGATTTTTC+AGG | + | chr2_1:29184139-29184158 | Msa0204250:intron | 25.0% |
| !!! | TTGATTTTTCAGGTTATGTT+TGG | + | chr2_1:29184149-29184168 | Msa0204250:intron | 25.0% |
| ! | CAACATGTAATTCAAAATGA+AGG | - | chr2_1:29184312-29184331 | None:intergenic | 25.0% |
| !! | TTGAATTACATGTTGCATTT+TGG | + | chr2_1:29184317-29184336 | Msa0204250:intron | 25.0% |
| ! | TGTAGTATAGTCATTCAATT+TGG | + | chr2_1:29184394-29184413 | Msa0204250:intron | 25.0% |
| !! | TCATAAAATTTTCCTTAGCA+TGG | + | chr2_1:29184593-29184612 | Msa0204250:intron | 25.0% |
| ! | GATTTACTTAATAAGCAACA+AGG | - | chr2_1:29184763-29184782 | None:intergenic | 25.0% |
| !!! | TAATGAGTTGATTCTTTTGT+TGG | + | chr2_1:29184874-29184893 | Msa0204250:intron | 25.0% |
| ! | AGATAATTAGAGACATGAAA+AGG | + | chr2_1:29184952-29184971 | Msa0204250:intron | 25.0% |
| !! | AATATAGAATTTGCTCAAGT+TGG | + | chr2_1:29184976-29184995 | Msa0204250:intron | 25.0% |
| !! | ATATAGAATTTGCTCAAGTT+GGG | + | chr2_1:29184977-29184996 | Msa0204250:intron | 25.0% |
| ! | ATTGATGTAATGTGGAATTA+GGG | + | chr2_1:29185074-29185093 | Msa0204250:intron | 25.0% |
| !! | ACAATAATCTTCAAGAGTTT+TGG | - | chr2_1:29185157-29185176 | None:intergenic | 25.0% |
| ! | AGTATTCTGACAAAAATCAA+GGG | - | chr2_1:29185239-29185258 | None:intergenic | 25.0% |
| ! | ATGCTTTGTAACAAATTTCA+AGG | - | chr2_1:29185263-29185282 | None:intergenic | 25.0% |
| !!! | ACAAAGTATTGATGTTTCTT+TGG | + | chr2_1:29185310-29185329 | Msa0204250:intron | 25.0% |
| ! | AATACATAAGAGAAAGCAAA+AGG | - | chr2_1:29185342-29185361 | None:intergenic | 25.0% |
| ! | ATGCTTGAAAATTAAAGCAA+AGG | - | chr2_1:29185402-29185421 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTAGAGATTT+TGG | + | chr2_1:29185429-29185448 | Msa0204250:intron | 25.0% |
| !!! | AAGCTTTGATTGATAATGAT+AGG | + | chr2_1:29186314-29186333 | Msa0204250:CDS | 25.0% |
| !! | TTTTCATAAAATGCTGGAAT+TGG | + | chr2_1:29186585-29186604 | Msa0204250:CDS | 25.0% |
| ! | TTCAGCAAGATAATTCTTAA+TGG | - | chr2_1:29186689-29186708 | None:intergenic | 25.0% |
| ! | GAATTATCTTGCTGAATATA+AGG | + | chr2_1:29186693-29186712 | Msa0204250:CDS | 25.0% |
| ! | CAAGTTAATATTTACGATGA+AGG | - | chr2_1:29186968-29186987 | None:intergenic | 25.0% |
| ! | ACTTGTATCTGTAATTAATC+TGG | + | chr2_1:29186983-29187002 | Msa0204250:intron | 25.0% |
| ! | AGTTATTACCTACATCAAAA+GGG | - | chr2_1:29187022-29187041 | None:intergenic | 25.0% |
| ! | TTAATACAATAGATAGCACA+AGG | - | chr2_1:29187114-29187133 | None:intergenic | 25.0% |
| ! | GAATGTTTCTTTCAAACAAA+TGG | + | chr2_1:29187352-29187371 | Msa0204250:CDS | 25.0% |
| !!! | TTGTTTTGAATGTCACATTT+TGG | + | chr2_1:29187424-29187443 | Msa0204250:CDS | 25.0% |
| !!! | TTTTGAAACACTTGCAATAT+GGG | - | chr2_1:29187483-29187502 | None:intergenic | 25.0% |
| ! | TACAAGTCGTTATATACATA+TGG | - | chr2_1:29187534-29187553 | None:intergenic | 25.0% |
| ! | AAACAAAATCTTGACGATAT+CGG | - | chr2_1:29187698-29187717 | None:intergenic | 25.0% |
| !!! | ATATCGTCAAGATTTTGTTT+CGG | + | chr2_1:29187698-29187717 | Msa0204250:CDS | 25.0% |
| ! | ATATCATATAGCAGTCATTA+AGG | - | chr2_1:29187905-29187924 | None:intergenic | 25.0% |
| ! | TCATGCAACAATTAAATATG+CGG | + | chr2_1:29188079-29188098 | Msa0204250:intron | 25.0% |
| !! | TAGCAATAATTGCTGTTAAT+TGG | + | chr2_1:29188494-29188513 | Msa0204250:intron | 25.0% |
| ! | AAGACAACTATAAATGTATC+AGG | - | chr2_1:29188523-29188542 | None:intergenic | 25.0% |
| ! | TGATACATTTATAGTTGTCT+TGG | + | chr2_1:29188522-29188541 | Msa0204250:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr2_1:29188866-29188885 | Msa0204250:intron | 25.0% |
| ! | CAAAAATAGAATTTCTGTCT+TGG | - | chr2_1:29188956-29188975 | None:intergenic | 25.0% |
| !! | CAAGACAGAAATTCTATTTT+TGG | + | chr2_1:29188954-29188973 | Msa0204250:intron | 25.0% |
| !! | CATTACACTTGTATTTTGTT+TGG | - | chr2_1:29189054-29189073 | None:intergenic | 25.0% |
| ! | AAACAATCTATGACCAAATT+GGG | - | chr2_1:29189293-29189312 | None:intergenic | 25.0% |
| ! | AAAACAATCTATGACCAAAT+TGG | - | chr2_1:29189294-29189313 | None:intergenic | 25.0% |
| ! | GGATATTCTACAAAAACAAA+AGG | - | chr2_1:29189520-29189539 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAATATCCCTTT+TGG | + | chr2_1:29189524-29189543 | Msa0204250:intron | 25.0% |
| ! | ACTATGTTCATTTCATCTAT+TGG | + | chr2_1:29189861-29189880 | Msa0204250:three_prime_UTR | 25.0% |
| TTAGAAAACAACCTCAAGTA+TGG | - | chr2_1:29184012-29184031 | None:intergenic | 30.0% | |
| !!! | TTTTTCAGGTTATGTTTGGA+TGG | + | chr2_1:29184153-29184172 | Msa0204250:intron | 30.0% |
| ! | ACAATTAGGGTTTAAGGTTT+AGG | + | chr2_1:29184217-29184236 | Msa0204250:intron | 30.0% |
| !! | CAATTTAGTTTGTAAGACGT+AGG | + | chr2_1:29184252-29184271 | Msa0204250:intron | 30.0% |
| CTAACAATGTTGATATTGCT+AGG | + | chr2_1:29184279-29184298 | Msa0204250:intron | 30.0% | |
| !!! | TTTTTTCTGTCTGTAGATAG+TGG | - | chr2_1:29184535-29184554 | None:intergenic | 30.0% |
| CAAAAGATTGGAATTGACAT+AGG | + | chr2_1:29184782-29184801 | Msa0204250:intron | 30.0% | |
| ! | TACAATACACGAGTTACTTT+CGG | + | chr2_1:29185051-29185070 | Msa0204250:intron | 30.0% |
| GATTGATGTAATGTGGAATT+AGG | + | chr2_1:29185073-29185092 | Msa0204250:intron | 30.0% | |
| !!! | TCAAGAGTTTTGGATTGAAA+TGG | - | chr2_1:29185147-29185166 | None:intergenic | 30.0% |
| ! | TGCTCTTTTTATACCACATT+GGG | + | chr2_1:29185213-29185232 | Msa0204250:intron | 30.0% |
| CAGTATTCTGACAAAAATCA+AGG | - | chr2_1:29185240-29185259 | None:intergenic | 30.0% | |
| !! | ATATGTGATGGATGAATACA+AGG | - | chr2_1:29185541-29185560 | None:intergenic | 30.0% |
| TGAAGTAACATACTGTGAAA+AGG | + | chr2_1:29185757-29185776 | Msa0204250:CDS | 30.0% | |
| !! | CCAGATTTTCCTTCATTTTT+AGG | - | chr2_1:29185799-29185818 | None:intergenic | 30.0% |
| CCTAAAAATGAAGGAAAATC+TGG | + | chr2_1:29185796-29185815 | Msa0204250:CDS | 30.0% | |
| AAAATGAAGGAAAATCTGGA+AGG | + | chr2_1:29185800-29185819 | Msa0204250:CDS | 30.0% | |
| AAATGAAGGAAAATCTGGAA+GGG | + | chr2_1:29185801-29185820 | Msa0204250:CDS | 30.0% | |
| CTGTAAATTTAACTCCTCTT+CGG | + | chr2_1:29185960-29185979 | Msa0204250:CDS | 30.0% | |
| GATTTAAACAACATTTGGCT+AGG | + | chr2_1:29186092-29186111 | Msa0204250:CDS | 30.0% | |
| TTATCAGACTTTGGATAGAA+AGG | - | chr2_1:29186241-29186260 | None:intergenic | 30.0% | |
| TCATCTTCATTATCAGACTT+TGG | - | chr2_1:29186250-29186269 | None:intergenic | 30.0% | |
| TACTTTGCATCATATGAACA+AGG | + | chr2_1:29186291-29186310 | Msa0204250:CDS | 30.0% | |
| ! | GTTTGAAGATTCTGATTTGT+GGG | - | chr2_1:29186445-29186464 | None:intergenic | 30.0% |
| ! | AGTTTGAAGATTCTGATTTG+TGG | - | chr2_1:29186446-29186465 | None:intergenic | 30.0% |
| TCAAACTTGCAAACAACTAA+AGG | + | chr2_1:29186459-29186478 | Msa0204250:CDS | 30.0% | |
| AAACAACTAAAGGTTAAGAC+AGG | + | chr2_1:29186469-29186488 | Msa0204250:CDS | 30.0% | |
| GTTAATATTTACGATGAAGG+AGG | - | chr2_1:29186965-29186984 | None:intergenic | 30.0% | |
| TTATTACCTACATCAAAAGG+GGG | - | chr2_1:29187020-29187039 | None:intergenic | 30.0% | |
| GTTATTACCTACATCAAAAG+GGG | - | chr2_1:29187021-29187040 | None:intergenic | 30.0% | |
| CAGTTATTACCTACATCAAA+AGG | - | chr2_1:29187023-29187042 | None:intergenic | 30.0% | |
| ATGAAAAGTGAATTTACCCA+TGG | + | chr2_1:29187240-29187259 | Msa0204250:CDS | 30.0% | |
| TGAAAAGTGAATTTACCCAT+GGG | + | chr2_1:29187241-29187260 | Msa0204250:CDS | 30.0% | |
| !!! | CTTTTGAAACACTTGCAATA+TGG | - | chr2_1:29187484-29187503 | None:intergenic | 30.0% |
| CATATTGCAAGTGTTTCAAA+AGG | + | chr2_1:29187482-29187501 | Msa0204250:CDS | 30.0% | |
| ATGTATATAACGACTTGTAC+AGG | + | chr2_1:29187535-29187554 | Msa0204250:CDS | 30.0% | |
| TGTATATAACGACTTGTACA+GGG | + | chr2_1:29187536-29187555 | Msa0204250:CDS | 30.0% | |
| CTTGCAATCAAATCTATTCA+TGG | + | chr2_1:29187564-29187583 | Msa0204250:CDS | 30.0% | |
| ! | TTTTTGTCATCCTCTTTACT+TGG | + | chr2_1:29187647-29187666 | Msa0204250:CDS | 30.0% |
| TCTTGAGCTGAATTATAATG+AGG | - | chr2_1:29187987-29188006 | None:intergenic | 30.0% | |
| ATCTAATGCAGTAATTTACC+TGG | - | chr2_1:29188056-29188075 | None:intergenic | 30.0% | |
| CATTAACTTTCTTCTGTGAT+AGG | - | chr2_1:29188304-29188323 | None:intergenic | 30.0% | |
| ATCAGACCTGATATTAAATC+AGG | + | chr2_1:29188611-29188630 | Msa0204250:intron | 30.0% | |
| GACTATCCTGATTTAATATC+AGG | - | chr2_1:29188620-29188639 | None:intergenic | 30.0% | |
| GTCATCGTTTCAAAGTTTAA+TGG | + | chr2_1:29188637-29188656 | Msa0204250:intron | 30.0% | |
| CATTCAATAAATGACGTATG+TGG | + | chr2_1:29188792-29188811 | Msa0204250:intron | 30.0% | |
| TAATAAAAACTTACTCCCTC+CGG | - | chr2_1:29188888-29188907 | None:intergenic | 30.0% | |
| AAAAATAGAGTCTTGCTAAC+CGG | - | chr2_1:29189006-29189025 | None:intergenic | 30.0% | |
| ACAAGTGTAATGAAAAAAGG+AGG | + | chr2_1:29189062-29189081 | Msa0204250:intron | 30.0% | |
| CAAGTGTAATGAAAAAAGGA+GGG | + | chr2_1:29189063-29189082 | Msa0204250:intron | 30.0% | |
| TTTCTTCTATAAAACTCCTG+AGG | + | chr2_1:29189115-29189134 | Msa0204250:intron | 30.0% | |
| TTCTTCTATAAAACTCCTGA+GGG | + | chr2_1:29189116-29189135 | Msa0204250:intron | 30.0% | |
| CAAGGTAATCAAAACCAAAA+GGG | - | chr2_1:29189192-29189211 | None:intergenic | 30.0% | |
| CTATATAGTACAAAAGTCCA+AGG | - | chr2_1:29189210-29189229 | None:intergenic | 30.0% | |
| TTGTTACATGCAACATAAGT+TGG | + | chr2_1:29189381-29189400 | Msa0204250:intron | 30.0% | |
| TGTTACATGCAACATAAGTT+GGG | + | chr2_1:29189382-29189401 | Msa0204250:intron | 30.0% | |
| GATTCAATAGACTATGATGA+TGG | + | chr2_1:29189578-29189597 | Msa0204250:CDS | 30.0% | |
| ! | AAGTTACAAGGTTTTCATTG+TGG | + | chr2_1:29189751-29189770 | Msa0204250:three_prime_UTR | 30.0% |
| GAAAAGCTGGGATATATAAA+AGG | + | chr2_1:29190013-29190032 | Msa0204250:three_prime_UTR | 30.0% | |
| ACTTTCTTGTTCTCGCAATT+GGG | + | chr2_1:29184059-29184078 | Msa0204250:intron | 35.0% | |
| CAATTGGGAATAGTAGCAAA+AGG | + | chr2_1:29184074-29184093 | Msa0204250:intron | 35.0% | |
| TAGGGTGAGAAAACTTAATG+TGG | + | chr2_1:29184625-29184644 | Msa0204250:intron | 35.0% | |
| GGAATTGACATAGGTTATGA+AGG | + | chr2_1:29184791-29184810 | Msa0204250:intron | 35.0% | |
| TATCCCTCAACAAAATCACA+AGG | - | chr2_1:29184933-29184952 | None:intergenic | 35.0% | |
| ACTTTCGGATTGATGTAATG+TGG | + | chr2_1:29185066-29185085 | Msa0204250:intron | 35.0% | |
| ! | TTGTGCAACTATGTTTCTGT+CGG | + | chr2_1:29185173-29185192 | Msa0204250:intron | 35.0% |
| ! | GTGCTCTTTTTATACCACAT+TGG | + | chr2_1:29185212-29185231 | Msa0204250:intron | 35.0% |
| ! | AAGGTATCTTTGTTGCCTAT+TGG | + | chr2_1:29185369-29185388 | Msa0204250:intron | 35.0% |
| TAGCTCTCATTTGGATGTAA+TGG | + | chr2_1:29185583-29185602 | Msa0204250:exon | 35.0% | |
| AAGGTTAGATGCAATTACTG+TGG | + | chr2_1:29185677-29185696 | Msa0204250:CDS | 35.0% | |
| AGGTTAGATGCAATTACTGT+GGG | + | chr2_1:29185678-29185697 | Msa0204250:CDS | 35.0% | |
| ! | ATGTTACTTCACCAGAAACT+CGG | - | chr2_1:29185748-29185767 | None:intergenic | 35.0% |
| !!! | ATTTTTAGGTAGACTTCCTC+CGG | - | chr2_1:29185785-29185804 | None:intergenic | 35.0% |
| GGAAGTCTACCTAAAAATGA+AGG | + | chr2_1:29185787-29185806 | Msa0204250:CDS | 35.0% | |
| AAGCAAAGGAAAGCAATTGA+TGG | + | chr2_1:29185922-29185941 | Msa0204250:CDS | 35.0% | |
| AAAGGAAAGCAATTGATGGA+TGG | + | chr2_1:29185926-29185945 | Msa0204250:CDS | 35.0% | |
| TACTGTGAGAAAGTTGTTAG+TGG | + | chr2_1:29186058-29186077 | Msa0204250:CDS | 35.0% | |
| AGGAGATACTGTAAAGATAC+AGG | + | chr2_1:29186334-29186353 | Msa0204250:CDS | 35.0% | |
| AGATACAGGAAAGACCTTTA+AGG | + | chr2_1:29186348-29186367 | Msa0204250:CDS | 35.0% | |
| GATACAGGAAAGACCTTTAA+GGG | + | chr2_1:29186349-29186368 | Msa0204250:CDS | 35.0% | |
| ATTAGAGGACATTCCCTTAA+AGG | - | chr2_1:29186365-29186384 | None:intergenic | 35.0% | |
| TCCTTGCGTAATTTCTTAGT+GGG | - | chr2_1:29186496-29186515 | None:intergenic | 35.0% | |
| TTCCTTGCGTAATTTCTTAG+TGG | - | chr2_1:29186497-29186516 | None:intergenic | 35.0% | |
| ! | AATCACTGGTTGTTCGATAA+TGG | + | chr2_1:29186726-29186745 | Msa0204250:CDS | 35.0% |
| ! | TTTCTTGTTTCATCTCCTCA+TGG | + | chr2_1:29186790-29186809 | Msa0204250:CDS | 35.0% |
| GAAACAAAGTATACACCATG+AGG | - | chr2_1:29186808-29186827 | None:intergenic | 35.0% | |
| TGCATCTTCAACTACATTAG+TGG | - | chr2_1:29186842-29186861 | None:intergenic | 35.0% | |
| ! | TAAGCTTTTGGACAAAGTAG+TGG | + | chr2_1:29186873-29186892 | Msa0204250:CDS | 35.0% |
| ! | GACAAAGTAGTGGAAGAAAT+AGG | + | chr2_1:29186883-29186902 | Msa0204250:CDS | 35.0% |
| AAATGCTTGAAGAAAGGAGA+AGG | + | chr2_1:29187073-29187092 | Msa0204250:CDS | 35.0% | |
| ! | AAAGGAGAAGGAATTTGTTC+TGG | + | chr2_1:29187085-29187104 | Msa0204250:CDS | 35.0% |
| TGCTACATTGCAGAATTTGT+TGG | + | chr2_1:29187308-29187327 | Msa0204250:CDS | 35.0% | |
| GTCTGAATGAATGCATTGTT+CGG | + | chr2_1:29187828-29187847 | Msa0204250:CDS | 35.0% | |
| AATTCAGCTCAAGATGACTT+TGG | + | chr2_1:29187993-29188012 | Msa0204250:CDS | 35.0% | |
| !! | AGATGACTTTGGAACTGAAT+TGG | + | chr2_1:29188004-29188023 | Msa0204250:CDS | 35.0% |
| ACAACATGGAATAAGTTGCT+TGG | + | chr2_1:29188172-29188191 | Msa0204250:CDS | 35.0% | |
| TGTCTGACTTAATATGCGAA+CGG | - | chr2_1:29188213-29188232 | None:intergenic | 35.0% | |
| GAGAATGCCAAGTAAGAAAA+AGG | + | chr2_1:29188357-29188376 | Msa0204250:CDS | 35.0% | |
| CCAAGTAAGAAAAAGGTCTA+GGG | + | chr2_1:29188364-29188383 | Msa0204250:CDS | 35.0% | |
| AAAGTTTAATGGTCTGACCA+GGG | + | chr2_1:29188648-29188667 | Msa0204250:intron | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | - | chr2_1:29188753-29188772 | None:intergenic | 35.0% | |
| TTGTTTATAATAGTGACCGG+AGG | - | chr2_1:29188754-29188773 | None:intergenic | 35.0% | |
| ACGTATGTGGTCTATATTGT+AGG | + | chr2_1:29188805-29188824 | Msa0204250:intron | 35.0% | |
| CCAAGGTAATCAAAACCAAA+AGG | - | chr2_1:29189193-29189212 | None:intergenic | 35.0% | |
| !!! | CCTTTTGGTTTTGATTACCT+TGG | + | chr2_1:29189190-29189209 | Msa0204250:intron | 35.0% |
| TTCAAAAGTCGAACCCAATT+TGG | + | chr2_1:29189277-29189296 | Msa0204250:intron | 35.0% | |
| CATCTAGATCAACACCAAAA+GGG | - | chr2_1:29189541-29189560 | None:intergenic | 35.0% | |
| TCATCTAGATCAACACCAAA+AGG | - | chr2_1:29189542-29189561 | None:intergenic | 35.0% | |
| !! | ACTATGATGATGGATCTGAA+AGG | + | chr2_1:29189588-29189607 | Msa0204250:CDS | 35.0% |
| GAGTGAGTAATCAAGTTACA+AGG | + | chr2_1:29189739-29189758 | Msa0204250:exon | 35.0% | |
| ! | TTACAAGGTTTTCATTGTGG+AGG | + | chr2_1:29189754-29189773 | Msa0204250:three_prime_UTR | 35.0% |
| ! | GTTTTCATTGTGGAGGAATA+AGG | + | chr2_1:29189761-29189780 | Msa0204250:three_prime_UTR | 35.0% |
| ATTGTGGAGGAATAAGGATT+TGG | + | chr2_1:29189767-29189786 | Msa0204250:three_prime_UTR | 35.0% | |
| TTCCCTGTGAAAAATCAAGA+TGG | + | chr2_1:29189818-29189837 | Msa0204250:three_prime_UTR | 35.0% | |
| ! | GACCATCTTGATTTTTCACA+GGG | - | chr2_1:29189823-29189842 | None:intergenic | 35.0% |
| TCATTTCATCTATTGGAGCA+TGG | + | chr2_1:29189868-29189887 | Msa0204250:three_prime_UTR | 35.0% | |
| AGATTTAGCTGTGTTTGTCA+TGG | + | chr2_1:29189987-29190006 | Msa0204250:three_prime_UTR | 35.0% | |
| TTTGTCATGGAAAGAAAAGC+TGG | + | chr2_1:29190000-29190019 | Msa0204250:three_prime_UTR | 35.0% | |
| TTGTCATGGAAAGAAAAGCT+GGG | + | chr2_1:29190001-29190020 | Msa0204250:three_prime_UTR | 35.0% | |
| ! | TGAGTTGGGGTTGAATTACT+GGG | - | chr2_1:29183880-29183899 | None:intergenic | 40.0% |
| GTTGTTGACGAAAATCGGTT+AGG | - | chr2_1:29183908-29183927 | None:intergenic | 40.0% | |
| GTTCGGTTGTTGACGAAAAT+CGG | - | chr2_1:29183913-29183932 | None:intergenic | 40.0% | |
| TGGATCTTCTTCCATACTTG+AGG | + | chr2_1:29183998-29184017 | Msa0204250:five_prime_UTR | 40.0% | |
| GACTTTCTTGTTCTCGCAAT+TGG | + | chr2_1:29184058-29184077 | Msa0204250:intron | 40.0% | |
| !! | GGTTGATTTGGATTGGTCTT+TGG | - | chr2_1:29184347-29184366 | None:intergenic | 40.0% |
| TTCACACCTGGATGACTTTA+GGG | - | chr2_1:29184469-29184488 | None:intergenic | 40.0% | |
| TTAAGCCATGACTCACCTAA+TGG | + | chr2_1:29184651-29184670 | Msa0204250:intron | 40.0% | |
| ! | TCCTCCTTGTGATTTTGTTG+AGG | + | chr2_1:29184926-29184945 | Msa0204250:intron | 40.0% |
| ! | CCTCCTTGTGATTTTGTTGA+GGG | + | chr2_1:29184927-29184946 | Msa0204250:intron | 40.0% |
| AGTCCCAACTTGGCATTTAT+AGG | + | chr2_1:29185121-29185140 | Msa0204250:intron | 40.0% | |
| TGGCCTATAAATGCCAAGTT+GGG | - | chr2_1:29185127-29185146 | None:intergenic | 40.0% | |
| ATGGCCTATAAATGCCAAGT+TGG | - | chr2_1:29185128-29185147 | None:intergenic | 40.0% | |
| GTTTGTGATGTATACGCTAC+TGG | + | chr2_1:29185453-29185472 | Msa0204250:intron | 40.0% | |
| ATGTATACGCTACTGGAACT+GGG | + | chr2_1:29185460-29185479 | Msa0204250:intron | 40.0% | |
| ! | TCCATCACATATGCTTTTGC+AGG | + | chr2_1:29185549-29185568 | Msa0204250:intron | 40.0% |
| ! | ACCTGCAAAAGCATATGTGA+TGG | - | chr2_1:29185553-29185572 | None:intergenic | 40.0% |
| GAATTGCGATAGCTCTCATT+TGG | + | chr2_1:29185574-29185593 | Msa0204250:five_prime_UTR | 40.0% | |
| !! | AGGATTTGTTGATCCTGGTT+GGG | + | chr2_1:29185622-29185641 | Msa0204250:CDS | 40.0% |
| TCAAGATGAGCGGAAAAAGA+AGG | + | chr2_1:29185658-29185677 | Msa0204250:CDS | 40.0% | |
| TACTGTGGGAAAGTTGTTAG+TGG | + | chr2_1:29185692-29185711 | Msa0204250:CDS | 40.0% | |
| ! | TGTTACTTCACCAGAAACTC+GGG | - | chr2_1:29185747-29185766 | None:intergenic | 40.0% |
| AACATACTGTGAAAAGGCTC+CGG | + | chr2_1:29185763-29185782 | Msa0204250:CDS | 40.0% | |
| AAGACGATGAAGAGCAAGTT+GGG | + | chr2_1:29185894-29185913 | Msa0204250:CDS | 40.0% | |
| TGTGAGAAAGTTGTTAGTGG+CGG | + | chr2_1:29186061-29186080 | Msa0204250:CDS | 40.0% | |
| ACAACATTTGGCTAGGATTC+CGG | + | chr2_1:29186099-29186118 | Msa0204250:CDS | 40.0% | |
| !!! | TCTTCTGGAGCACTTTTACA+AGG | - | chr2_1:29186136-29186155 | None:intergenic | 40.0% |
| AATATGAAATGGCATCGCAC+TGG | + | chr2_1:29186178-29186197 | Msa0204250:CDS | 40.0% | |
| ATCGCACTGGAAAAAGACAT+AGG | + | chr2_1:29186191-29186210 | Msa0204250:CDS | 40.0% | |
| AATCTTGATCTTCTCAACGC+TGG | - | chr2_1:29186400-29186419 | None:intergenic | 40.0% | |
| ACCCACTAAGAAATTACGCA+AGG | + | chr2_1:29186492-29186511 | Msa0204250:CDS | 40.0% | |
| CATAAAATGCTGGAATTGGC+TGG | + | chr2_1:29186589-29186608 | Msa0204250:CDS | 40.0% | |
| AAAAGCGACCCGAAATAAGT+TGG | - | chr2_1:29186648-29186667 | None:intergenic | 40.0% | |
| TTGCTGAATATAAGGCTTCC+TGG | + | chr2_1:29186701-29186720 | Msa0204250:CDS | 40.0% | |
| TGCTGAATATAAGGCTTCCT+GGG | + | chr2_1:29186702-29186721 | Msa0204250:CDS | 40.0% | |
| ! | GTTCGATAATGGCTGATAGT+TGG | + | chr2_1:29186737-29186756 | Msa0204250:CDS | 40.0% |
| AGGTGAAGAAAATGTAGTGC+AGG | + | chr2_1:29186903-29186922 | Msa0204250:CDS | 40.0% | |
| CTACATCAAAAGGGGGAATT+AGG | - | chr2_1:29187013-29187032 | None:intergenic | 40.0% | |
| ! | CTAATTCCCCCTTTTGATGT+AGG | + | chr2_1:29187011-29187030 | Msa0204250:intron | 40.0% |
| ACTCCTAACTATAAAGCTGC+TGG | + | chr2_1:29187048-29187067 | Msa0204250:CDS | 40.0% | |
| CTCCTAACTATAAAGCTGCT+GGG | + | chr2_1:29187049-29187068 | Msa0204250:CDS | 40.0% | |
| ! | TTCCCAGCAGCTTTATAGTT+AGG | - | chr2_1:29187054-29187073 | None:intergenic | 40.0% |
| CTGGGAAAATGCTTGAAGAA+AGG | + | chr2_1:29187067-29187086 | Msa0204250:CDS | 40.0% | |
| ! | TAGATGTGTAGAAGAGTGCA+TGG | + | chr2_1:29187161-29187180 | Msa0204250:CDS | 40.0% |
| ! | TGTAGAAGAGTGCATGGAAA+AGG | + | chr2_1:29187167-29187186 | Msa0204250:CDS | 40.0% |
| ! | GTAGAAGAGTGCATGGAAAA+GGG | + | chr2_1:29187168-29187187 | Msa0204250:CDS | 40.0% |
| ! | CTTTAGAAGCTCATTCCCAT+GGG | - | chr2_1:29187259-29187278 | None:intergenic | 40.0% |
| CAAACAAATGGATGTCATCC+AGG | + | chr2_1:29187364-29187383 | Msa0204250:CDS | 40.0% | |
| GGAAGAAAATGCAGTATGTG+AGG | + | chr2_1:29187445-29187464 | Msa0204250:CDS | 40.0% | |
| !! | GTGTTTCAAAAGGTGTCTAG+TGG | + | chr2_1:29187492-29187511 | Msa0204250:CDS | 40.0% |
| GAAATATGAGCCATTCTGGA+AGG | + | chr2_1:29187599-29187618 | Msa0204250:CDS | 40.0% | |
| AAGTAAGCAGCCAAGTAAAG+AGG | - | chr2_1:29187660-29187679 | None:intergenic | 40.0% | |
| TCTTGACGATATCGGTATGA+CGG | - | chr2_1:29187690-29187709 | None:intergenic | 40.0% | |
| TAGCATTCTGATGTAGTACG+TGG | + | chr2_1:29187806-29187825 | Msa0204250:intron | 40.0% | |
| TTGGCAATTAGCACAAGAAC+AGG | + | chr2_1:29188023-29188042 | Msa0204250:CDS | 40.0% | |
| AGCAGCTAGTGAGGTAAAAA+GGG | - | chr2_1:29188144-29188163 | None:intergenic | 40.0% | |
| AAGCAGCTAGTGAGGTAAAA+AGG | - | chr2_1:29188145-29188164 | None:intergenic | 40.0% | |
| ! | TTTTTACCTCACTAGCTGCT+TGG | + | chr2_1:29188144-29188163 | Msa0204250:intron | 40.0% |
| ! | TCTTTTGCATGTGAGCATGA+TGG | + | chr2_1:29188239-29188258 | Msa0204250:CDS | 40.0% |
| ! | CTTTTGCATGTGAGCATGAT+GGG | + | chr2_1:29188240-29188259 | Msa0204250:CDS | 40.0% |
| GCCAAGTAAGAAAAAGGTCT+AGG | + | chr2_1:29188363-29188382 | Msa0204250:CDS | 40.0% | |
| ! | CCCTAGACCTTTTTCTTACT+TGG | - | chr2_1:29188367-29188386 | None:intergenic | 40.0% |
| TTGTAGAACATTCTCAGCAG+AGG | - | chr2_1:29188402-29188421 | None:intergenic | 40.0% | |
| CAAAGTTTAATGGTCTGACC+AGG | + | chr2_1:29188647-29188666 | Msa0204250:intron | 40.0% | |
| !! | AATTATTACCGGTTCAACCC+TGG | - | chr2_1:29188668-29188687 | None:intergenic | 40.0% |
| TTGCTTATAATAGTGACCGG+AGG | + | chr2_1:29188869-29188888 | Msa0204250:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr2_1:29188870-29188889 | Msa0204250:intron | 40.0% | |
| CAATCAGATGTCCACATTGT+TGG | - | chr2_1:29189491-29189510 | None:intergenic | 40.0% | |
| !! | TGGATCTGAAAGGCATCTAA+AGG | + | chr2_1:29189598-29189617 | Msa0204250:CDS | 40.0% |
| !! | GGATCTGAAAGGCATCTAAA+GGG | + | chr2_1:29189599-29189618 | Msa0204250:CDS | 40.0% |
| TTCCAATGAGCTGGTTACTA+TGG | + | chr2_1:29189622-29189641 | Msa0204250:CDS | 40.0% | |
| GCAGATCATGCTAACATTGA+TGG | + | chr2_1:29189671-29189690 | Msa0204250:CDS | 40.0% | |
| ! | CGACCATCTTGATTTTTCAC+AGG | - | chr2_1:29189824-29189843 | None:intergenic | 40.0% |
| TTTCATCTATTGGAGCATGG+TGG | + | chr2_1:29189871-29189890 | Msa0204250:three_prime_UTR | 40.0% | |
| ! | GTGAGTTGGGGTTGAATTAC+TGG | - | chr2_1:29183881-29183900 | None:intergenic | 45.0% |
| TCGGTTAGGAATCGTGAGTT+GGG | - | chr2_1:29183894-29183913 | None:intergenic | 45.0% | |
| ATCGGTTAGGAATCGTGAGT+TGG | - | chr2_1:29183895-29183914 | None:intergenic | 45.0% | |
| GATCCAGATCGAAGTGGAAT+CGG | - | chr2_1:29183984-29184003 | None:intergenic | 45.0% | |
| GAAGAAGATCCAGATCGAAG+TGG | - | chr2_1:29183990-29184009 | None:intergenic | 45.0% | |
| !! | TATGCGGGGTTGATTTGGAT+TGG | - | chr2_1:29184354-29184373 | None:intergenic | 45.0% |
| ! | CCAAATATGCGGGGTTGATT+TGG | - | chr2_1:29184359-29184378 | None:intergenic | 45.0% |
| CCAAATCAACCCCGCATATT+TGG | + | chr2_1:29184356-29184375 | Msa0204250:intron | 45.0% | |
| TCAACCCCGCATATTTGGAT+CGG | + | chr2_1:29184361-29184380 | Msa0204250:intron | 45.0% | |
| TCCGATCCGATCCAAATATG+CGG | - | chr2_1:29184370-29184389 | None:intergenic | 45.0% | |
| !! | TGCGGTTTGGATCAGTTTTG+AGG | - | chr2_1:29184436-29184455 | None:intergenic | 45.0% |
| TCACACCTGGATGACTTTAG+GGG | - | chr2_1:29184468-29184487 | None:intergenic | 45.0% | |
| GTTCACACCTGGATGACTTT+AGG | - | chr2_1:29184470-29184489 | None:intergenic | 45.0% | |
| ACTCATACGCACAACTGTGA+GGG | - | chr2_1:29184497-29184516 | None:intergenic | 45.0% | |
| AACTCATACGCACAACTGTG+AGG | - | chr2_1:29184498-29184517 | None:intergenic | 45.0% | |
| TTAGCATGGTACGAGACGTA+GGG | + | chr2_1:29184607-29184626 | Msa0204250:intron | 45.0% | |
| !!! | ACCTAATGGACTGGCCTTTT+TGG | + | chr2_1:29184665-29184684 | Msa0204250:intron | 45.0% |
| ACCAAAAAGGCCAGTCCATT+AGG | - | chr2_1:29184669-29184688 | None:intergenic | 45.0% | |
| !!! | AATGGACTGGCCTTTTTGGT+TGG | + | chr2_1:29184669-29184688 | Msa0204250:intron | 45.0% |
| !!! | ATGGACTGGCCTTTTTGGTT+GGG | + | chr2_1:29184670-29184689 | Msa0204250:intron | 45.0% |
| CCCTCAACAAAATCACAAGG+AGG | - | chr2_1:29184930-29184949 | None:intergenic | 45.0% | |
| !! | TTGCTCAAGTTGGGTTTCCT+TGG | + | chr2_1:29184986-29185005 | Msa0204250:intron | 45.0% |
| !! | TCAAGTTGGGTTTCCTTGGT+TGG | + | chr2_1:29184990-29185009 | Msa0204250:intron | 45.0% |
| !! | TGTCGGTTGCTGTTTCTTGA+TGG | + | chr2_1:29185190-29185209 | Msa0204250:intron | 45.0% |
| CAAAAATCAAGGGCCCAATG+TGG | - | chr2_1:29185229-29185248 | None:intergenic | 45.0% | |
| ! | AGCAAAGGAAGCATGCCAAT+AGG | - | chr2_1:29185387-29185406 | None:intergenic | 45.0% |
| GATGTATACGCTACTGGAAC+TGG | + | chr2_1:29185459-29185478 | Msa0204250:intron | 45.0% | |
| TGTATACGCTACTGGAACTG+GGG | + | chr2_1:29185461-29185480 | Msa0204250:intron | 45.0% | |
| ACAAATCCTGTGGAGCGTAT+TGG | - | chr2_1:29185611-29185630 | None:intergenic | 45.0% | |
| !! | TCCACAGGATTTGTTGATCC+TGG | + | chr2_1:29185617-29185636 | Msa0204250:CDS | 45.0% |
| ACCAGGATCAACAAATCCTG+TGG | - | chr2_1:29185621-29185640 | None:intergenic | 45.0% | |
| !! | CAGGATTTGTTGATCCTGGT+TGG | + | chr2_1:29185621-29185640 | Msa0204250:CDS | 45.0% |
| ATGGCATTGCTCAAGATGAG+CGG | + | chr2_1:29185648-29185667 | Msa0204250:CDS | 45.0% | |
| TGTGGGAAAGTTGTTAGTGG+TGG | + | chr2_1:29185695-29185714 | Msa0204250:CDS | 45.0% | |
| GTGGGAAAGTTGTTAGTGGT+GGG | + | chr2_1:29185696-29185715 | Msa0204250:CDS | 45.0% | |
| GAAGACGATGAAGAGCAAGT+TGG | + | chr2_1:29185893-29185912 | Msa0204250:CDS | 45.0% | |
| ! | CAAGTTGGGTGTAGAAGCAA+AGG | + | chr2_1:29185908-29185927 | Msa0204250:CDS | 45.0% |
| ! | GAAAGCAATTGATGGATGGC+AGG | + | chr2_1:29185930-29185949 | Msa0204250:CDS | 45.0% |
| TTAACTCCTCTTCGGTCCTT+AGG | + | chr2_1:29185968-29185987 | Msa0204250:CDS | 45.0% | |
| ACATATCCTAAGGACCGAAG+AGG | - | chr2_1:29185977-29185996 | None:intergenic | 45.0% | |
| TCCTTAGGATATGTTGACCC+AGG | + | chr2_1:29185983-29186002 | Msa0204250:CDS | 45.0% | |
| CCTTAGGATATGTTGACCCA+GGG | + | chr2_1:29185984-29186003 | Msa0204250:CDS | 45.0% | |
| CAACATTTGGCTAGGATTCC+GGG | + | chr2_1:29186100-29186119 | Msa0204250:CDS | 45.0% | |
| AAAAAGACATAGGCAACCCG+AGG | + | chr2_1:29186201-29186220 | Msa0204250:CDS | 45.0% | |
| AAAAGACATAGGCAACCCGA+GGG | + | chr2_1:29186202-29186221 | Msa0204250:CDS | 45.0% | |
| !! | TGGTTCTGGGCTAGTATTAG+AGG | - | chr2_1:29186380-29186399 | None:intergenic | 45.0% |
| !! | ATCTTCTCAACGCTGGTTCT+GGG | - | chr2_1:29186393-29186412 | None:intergenic | 45.0% |
| CTTGTAAAGGAATTCCTGCG+TGG | - | chr2_1:29186549-29186568 | None:intergenic | 45.0% | |
| ACAGAGTCTGCAGCTTGTAA+AGG | - | chr2_1:29186562-29186581 | None:intergenic | 45.0% | |
| ! | CTGGAATTGGCTGGTCAATA+TGG | + | chr2_1:29186598-29186617 | Msa0204250:CDS | 45.0% |
| ! | TTGGCTGGTCAATATGGACA+AGG | + | chr2_1:29186604-29186623 | Msa0204250:CDS | 45.0% |
| TGGTCAATATGGACAAGGAC+TGG | + | chr2_1:29186609-29186628 | Msa0204250:CDS | 45.0% | |
| ! | CCGAAATAAGTTGGCTGGAT+GGG | - | chr2_1:29186639-29186658 | None:intergenic | 45.0% |
| CCCATCCAGCCAACTTATTT+CGG | + | chr2_1:29186636-29186655 | Msa0204250:CDS | 45.0% | |
| CCATCCAGCCAACTTATTTC+GGG | + | chr2_1:29186637-29186656 | Msa0204250:CDS | 45.0% | |
| !!! | TATTTCGGGTCGCTTTTTGC+AGG | + | chr2_1:29186651-29186670 | Msa0204250:CDS | 45.0% |
| TGATAGTTGGAGAGATGCAC+AGG | + | chr2_1:29186750-29186769 | Msa0204250:CDS | 45.0% | |
| GATAGTTGGAGAGATGCACA+GGG | + | chr2_1:29186751-29186770 | Msa0204250:CDS | 45.0% | |
| !! | GCTTTAGAAGCTCATTCCCA+TGG | - | chr2_1:29187260-29187279 | None:intergenic | 45.0% |
| !! | AATGAGCTTCTAAAGCCAGC+TGG | + | chr2_1:29187264-29187283 | Msa0204250:CDS | 45.0% |
| ! | AGCAAAGCTAGAAGCACACT+GGG | - | chr2_1:29187292-29187311 | None:intergenic | 45.0% |
| ! | TAGCAAAGCTAGAAGCACAC+TGG | - | chr2_1:29187293-29187312 | None:intergenic | 45.0% |
| !!! | TTTTTTGCACCTCTTTCCCC+TGG | - | chr2_1:29187404-29187423 | None:intergenic | 45.0% |
| CTATTCATGGCGATGATGCA+CGG | + | chr2_1:29187577-29187596 | Msa0204250:CDS | 45.0% | |
| CACGGAAATATGAGCCATTC+TGG | + | chr2_1:29187595-29187614 | Msa0204250:CDS | 45.0% | |
| CTGTCTATCACCTTCCAGAA+TGG | - | chr2_1:29187612-29187631 | None:intergenic | 45.0% | |
| ! | CATTCTGGAAGGTGATAGAC+AGG | + | chr2_1:29187610-29187629 | Msa0204250:CDS | 45.0% |
| ACAAGAACAGGTCTTGAACC+AGG | + | chr2_1:29188035-29188054 | Msa0204250:CDS | 45.0% | |
| !! | AAGAGCACTTACTTGCTGAC+TGG | + | chr2_1:29188420-29188439 | Msa0204250:CDS | 45.0% |
| ! | ACAAAGCTCTGATGGTGACA+AGG | + | chr2_1:29188460-29188479 | Msa0204250:CDS | 45.0% |
| AGGAGAATGCTAAACAGTCC+AGG | + | chr2_1:29188698-29188717 | Msa0204250:intron | 45.0% | |
| GGAGAATGCTAAACAGTCCA+GGG | + | chr2_1:29188699-29188718 | Msa0204250:intron | 45.0% | |
| GAGAATGCTAAACAGTCCAG+GGG | + | chr2_1:29188700-29188719 | Msa0204250:intron | 45.0% | |
| !! | ACCAAAAGAAGTACTCCCTC+CGG | + | chr2_1:29188735-29188754 | Msa0204250:intron | 45.0% |
| GGATTTCTTAACGAGTGCCT+CGG | + | chr2_1:29188975-29188994 | Msa0204250:intron | 45.0% | |
| GATTTCTTAACGAGTGCCTC+GGG | + | chr2_1:29188976-29188995 | Msa0204250:intron | 45.0% | |
| ATTTCTTAACGAGTGCCTCG+GGG | + | chr2_1:29188977-29188996 | Msa0204250:intron | 45.0% | |
| TTCGAGACTGGAAACAGATC+CGG | + | chr2_1:29189141-29189160 | Msa0204250:intron | 45.0% | |
| AAGGGCCAGTTTGACAAGTT+GGG | - | chr2_1:29189174-29189193 | None:intergenic | 45.0% | |
| AAAGGGCCAGTTTGACAAGT+TGG | - | chr2_1:29189175-29189194 | None:intergenic | 45.0% | |
| ! | ACTTGTCAAACTGGCCCTTT+TGG | + | chr2_1:29189175-29189194 | Msa0204250:intron | 45.0% |
| CTTCGCTGCTGACAAACATA+TGG | - | chr2_1:29189466-29189485 | None:intergenic | 45.0% | |
| TCTAAAGGGTTCCAATGAGC+TGG | + | chr2_1:29189613-29189632 | Msa0204250:CDS | 45.0% | |
| AGCCATAGTAACCAGCTCAT+TGG | - | chr2_1:29189627-29189646 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGTTGCCAGTTG+TGG | + | chr2_1:29189780-29189799 | Msa0204250:three_prime_UTR | 45.0% |
| ! | AGGATTTGGTTGCCAGTTGT+GGG | + | chr2_1:29189781-29189800 | Msa0204250:three_prime_UTR | 45.0% |
| CAATAATACAGGCCCACAAC+TGG | - | chr2_1:29189796-29189815 | None:intergenic | 45.0% | |
| CAGTTGTGGGCCTGTATTAT+TGG | + | chr2_1:29189794-29189813 | Msa0204250:three_prime_UTR | 45.0% | |
| CACAGGGAAGCCAATAATAC+AGG | - | chr2_1:29189807-29189826 | None:intergenic | 45.0% | |
| !!! | TTATAATTTTTTTTACAATT+AGG | + | chr2_1:29184203-29184222 | Msa0204250:intron | 5.0% |
| !!! | TATAATTTTTTTTACAATTA+GGG | + | chr2_1:29184204-29184223 | Msa0204250:intron | 5.0% |
| !!! | TATATATGTTTTATAAATAA+AGG | + | chr2_1:29188580-29188599 | Msa0204250:intron | 5.0% |
| !! | TTATATTATTTAATTATTAC+CGG | - | chr2_1:29188679-29188698 | None:intergenic | 5.0% |
| !!! | TTATCTTTTTTATTTTTTAA+GGG | - | chr2_1:29189439-29189458 | None:intergenic | 5.0% |
| !!! | ATTATCTTTTTTATTTTTTA+AGG | - | chr2_1:29189440-29189459 | None:intergenic | 5.0% |
| CGGTTAGGAATCGTGAGTTG+GGG | - | chr2_1:29183893-29183912 | None:intergenic | 50.0% | |
| GGTGGAGATAGAGTTTCAGG+CGG | - | chr2_1:29183960-29183979 | None:intergenic | 50.0% | |
| CGATCCGATCCAAATATGCG+GGG | - | chr2_1:29184368-29184387 | None:intergenic | 50.0% | |
| CCGATCCGATCCAAATATGC+GGG | - | chr2_1:29184369-29184388 | None:intergenic | 50.0% | |
| CCCGCATATTTGGATCGGAT+CGG | + | chr2_1:29184366-29184385 | Msa0204250:intron | 50.0% | |
| GAACACCCCTAAAGTCATCC+AGG | + | chr2_1:29184460-29184479 | Msa0204250:intron | 50.0% | |
| CTACGTCTCGTACCATGCTA+AGG | - | chr2_1:29184608-29184627 | None:intergenic | 50.0% | |
| CTTAGCATGGTACGAGACGT+AGG | + | chr2_1:29184606-29184625 | Msa0204250:intron | 50.0% | |
| CCAGTCCATTAGGTGAGTCA+TGG | - | chr2_1:29184659-29184678 | None:intergenic | 50.0% | |
| ! | CCATGACTCACCTAATGGAC+TGG | + | chr2_1:29184656-29184675 | Msa0204250:intron | 50.0% |
| TGAAGCAGATGCTGCGCTAA+TGG | + | chr2_1:29184830-29184849 | Msa0204250:intron | 50.0% | |
| GAAGCAGATGCTGCGCTAAT+GGG | + | chr2_1:29184831-29184850 | Msa0204250:intron | 50.0% | |
| TCTCGATGCTAGTCCCAACT+TGG | + | chr2_1:29185111-29185130 | Msa0204250:intron | 50.0% | |
| GTTGATCCTGGTTGGGATCA+TGG | + | chr2_1:29185629-29185648 | Msa0204250:CDS | 50.0% | |
| CAGCATTTAGCCCGAGTTTC+TGG | + | chr2_1:29185734-29185753 | Msa0204250:CDS | 50.0% | |
| ATACTGTGAAAAGGCTCCGG+AGG | + | chr2_1:29185766-29185785 | Msa0204250:CDS | 50.0% | |
| CCCTGGGTCAACATATCCTA+AGG | - | chr2_1:29185987-29186006 | None:intergenic | 50.0% | |
| TAGGATATGTTGACCCAGGG+TGG | + | chr2_1:29185987-29186006 | Msa0204250:CDS | 50.0% | |
| AGGATATGTTGACCCAGGGT+GGG | + | chr2_1:29185988-29186007 | Msa0204250:CDS | 50.0% | |
| ! | TTACAAGGTGCTACCTCTCC+CGG | - | chr2_1:29186121-29186140 | None:intergenic | 50.0% |
| AGGCATCAGATCCTTACCCT+CGG | - | chr2_1:29186221-29186240 | None:intergenic | 50.0% | |
| AGATGACGAGTATGAGCAGC+AGG | + | chr2_1:29186264-29186283 | Msa0204250:CDS | 50.0% | |
| !! | GATCTTCTCAACGCTGGTTC+TGG | - | chr2_1:29186394-29186413 | None:intergenic | 50.0% |
| ! | TGCAAGTTCTTTTGCCACGC+AGG | + | chr2_1:29186532-29186551 | Msa0204250:CDS | 50.0% |
| ! | CCCGAAATAAGTTGGCTGGA+TGG | - | chr2_1:29186640-29186659 | None:intergenic | 50.0% |
| AGGTTCTCCAGTTCAAGCCA+GGG | + | chr2_1:29187384-29187403 | Msa0204250:CDS | 50.0% | |
| TTACCTCACTAGCTGCTTGG+TGG | + | chr2_1:29188147-29188166 | Msa0204250:intron | 50.0% | |
| ! | ACCACTGCACAAAGCTCTGA+TGG | + | chr2_1:29188452-29188471 | Msa0204250:CDS | 50.0% |
| ! | ACCATCAGAGCTTTGTGCAG+TGG | - | chr2_1:29188456-29188475 | None:intergenic | 50.0% |
| !!! | ACCGGAGGGAGTACTTCTTT+TGG | - | chr2_1:29188739-29188758 | None:intergenic | 50.0% |
| TTTCTTAACGAGTGCCTCGG+GGG | + | chr2_1:29188978-29188997 | Msa0204250:intron | 50.0% | |
| CTGGAAACAGATCCGGTTTC+CGG | + | chr2_1:29189148-29189167 | Msa0204250:intron | 50.0% | |
| GAGCTGGTTACTATGGCTGA+TGG | + | chr2_1:29189629-29189648 | Msa0204250:CDS | 50.0% | |
| ACTATGGCTGATGGAGCAGT+AGG | + | chr2_1:29189638-29189657 | Msa0204250:CDS | 50.0% | |
| TTCAGGCGGTGGAAGATCGA+CGG | - | chr2_1:29183946-29183965 | None:intergenic | 55.0% | |
| GGAGATAGAGTTTCAGGCGG+TGG | - | chr2_1:29183957-29183976 | None:intergenic | 55.0% | |
| GGCGGTGGAGATAGAGTTTC+AGG | - | chr2_1:29183963-29183982 | None:intergenic | 55.0% | |
| CCAGATCGAAGTGGAATCGG+CGG | - | chr2_1:29183981-29184000 | None:intergenic | 55.0% | |
| !! | CTTTAGGGGTGTTCGCAGTG+CGG | - | chr2_1:29184454-29184473 | None:intergenic | 55.0% |
| TACGCACAACTGTGAGGGCA+AGG | - | chr2_1:29184492-29184511 | None:intergenic | 55.0% | |
| !!! | GGCCTTTTTGGTTGGGCTCT+CGG | + | chr2_1:29184677-29184696 | Msa0204250:intron | 55.0% |
| AGCCGAGAGCCCAACCAAAA+AGG | - | chr2_1:29184682-29184701 | None:intergenic | 55.0% | |
| ATACGCTACTGGAACTGGGG+AGG | + | chr2_1:29185464-29185483 | Msa0204250:intron | 55.0% | |
| ACTGGAACTGGGGAGGTTCT+CGG | + | chr2_1:29185471-29185490 | Msa0204250:intron | 55.0% | |
| ATGGCTCCAATACGCTCCAC+AGG | + | chr2_1:29185602-29185621 | Msa0204250:CDS | 55.0% | |
| GCAATGCCATGATCCCAACC+AGG | - | chr2_1:29185638-29185657 | None:intergenic | 55.0% | |
| TTTGGCTAGGATTCCGGGAG+AGG | + | chr2_1:29186105-29186124 | Msa0204250:CDS | 55.0% | |
| ACATAGGCAACCCGAGGGTA+AGG | + | chr2_1:29186207-29186226 | Msa0204250:CDS | 55.0% | |
| GGCATCAGATCCTTACCCTC+GGG | - | chr2_1:29186220-29186239 | None:intergenic | 55.0% | |
| ! | GCGACCCGAAATAAGTTGGC+TGG | - | chr2_1:29186644-29186663 | None:intergenic | 55.0% |
| !!! | TTCGGGTCGCTTTTTGCAGG+AGG | + | chr2_1:29186654-29186673 | Msa0204250:CDS | 55.0% |
| AAGGCTTCCTGGGCAATCAC+TGG | + | chr2_1:29186712-29186731 | Msa0204250:CDS | 55.0% | |
| CGAACAACCAGTGATTGCCC+AGG | - | chr2_1:29186722-29186741 | None:intergenic | 55.0% | |
| GTTGGAGAGATGCACAGGGT+AGG | + | chr2_1:29186755-29186774 | Msa0204250:CDS | 55.0% | |
| ! | CTGGCTTGAACTGGAGAACC+TGG | - | chr2_1:29187385-29187404 | None:intergenic | 55.0% |
| CAGGTTCTCCAGTTCAAGCC+AGG | + | chr2_1:29187383-29187402 | Msa0204250:CDS | 55.0% | |
| GGTTCTCCAGTTCAAGCCAG+GGG | + | chr2_1:29187385-29187404 | Msa0204250:CDS | 55.0% | |
| ! | CTCTTTCCCCTGGCTTGAAC+TGG | - | chr2_1:29187394-29187413 | None:intergenic | 55.0% |
| CAGTTCAAGCCAGGGGAAAG+AGG | + | chr2_1:29187392-29187411 | Msa0204250:CDS | 55.0% | |
| TTGCCACCAAGCAGCTAGTG+AGG | - | chr2_1:29188153-29188172 | None:intergenic | 55.0% | |
| ! | GCTGCTTGGTGGCAACAACA+TGG | + | chr2_1:29188158-29188177 | Msa0204250:intron | 55.0% |
| TGGTCTGACCAGGGTTGAAC+CGG | + | chr2_1:29188657-29188676 | Msa0204250:intron | 55.0% | |
| ! | GCTAAACAGTCCAGGGGCAT+TGG | + | chr2_1:29188706-29188725 | Msa0204250:intron | 55.0% |
| TGGTGCATAACCAATGCCCC+TGG | - | chr2_1:29188719-29188738 | None:intergenic | 55.0% | |
| TTCCAGTCTCGAAGACCCTC+AGG | - | chr2_1:29189134-29189153 | None:intergenic | 55.0% | |
| ! | TGACAAGTTGGGCCGGAAAC+CGG | - | chr2_1:29189163-29189182 | None:intergenic | 55.0% |
| TCCGGCCCAACTTGTCAAAC+TGG | + | chr2_1:29189166-29189185 | Msa0204250:intron | 55.0% | |
| ! | GCCAGTTTGACAAGTTGGGC+CGG | - | chr2_1:29189170-29189189 | None:intergenic | 55.0% |
| ! | GCAGCGAAGCACCAACAATG+TGG | + | chr2_1:29189477-29189496 | Msa0204250:intron | 55.0% |
| ! | TGGTGCCAGTGACGATGAGT+CGG | + | chr2_1:29189691-29189710 | Msa0204250:CDS | 55.0% |
| CAGATCCGACTCATCGTCAC+TGG | - | chr2_1:29189699-29189718 | None:intergenic | 55.0% | |
| GATCGAAGTGGAATCGGCGG+TGG | - | chr2_1:29183978-29183997 | None:intergenic | 60.0% | |
| !! | CCGCCGATTCCACTTCGATC+TGG | + | chr2_1:29183978-29183997 | Msa0204250:five_prime_UTR | 60.0% |
| GTGAGGGCAAGGTTCACACC+TGG | - | chr2_1:29184481-29184500 | None:intergenic | 60.0% | |
| TGGGCTCTCGGCTCTTCTCA+TGG | + | chr2_1:29184689-29184708 | Msa0204250:intron | 60.0% | |
| GGGCTCTCGGCTCTTCTCAT+GGG | + | chr2_1:29184690-29184709 | Msa0204250:intron | 60.0% | |
| GTTGACCCAGGGTGGGAACA+CGG | + | chr2_1:29185995-29186014 | Msa0204250:CDS | 60.0% | |
| CAACACCGTGTTCCCACCCT+GGG | - | chr2_1:29186003-29186022 | None:intergenic | 60.0% | |
| !! | GTGGGAACACGGTGTTGCTC+AGG | + | chr2_1:29186006-29186025 | Msa0204250:CDS | 60.0% |
| CTCCTGAGGGTCTTCGAGAC+TGG | + | chr2_1:29189129-29189148 | Msa0204250:intron | 60.0% | |
| TCGACGGCGGCGGAATCGTT+CGG | - | chr2_1:29183930-29183949 | None:intergenic | 65.0% | |
| AGGCGGTGGAAGATCGACGG+CGG | - | chr2_1:29183943-29183962 | None:intergenic | 65.0% | |
| ! | GGGGTGTTCGCAGTGCGGTT+TGG | - | chr2_1:29184449-29184468 | None:intergenic | 65.0% |
| GCAACACCGTGTTCCCACCC+TGG | - | chr2_1:29186004-29186023 | None:intergenic | 65.0% | |
| GAAGCACACTGGGTGCCAGC+TGG | - | chr2_1:29187282-29187301 | None:intergenic | 65.0% | |
| CGGTGGAAGATCGACGGCGG+CGG | - | chr2_1:29183940-29183959 | None:intergenic | 70.0% | |
| ! | AACGAGTGCCTCGGGGGCAC+CGG | + | chr2_1:29188984-29189003 | Msa0204250:intron | 70.0% |
| CTTGCTAACCGGTGCCCCCG+AGG | - | chr2_1:29188995-29189014 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 29183862 | 29190061 | 29183862 | ID=Msa0204250;Name=Msa0204250 |
| chr2_1 | mRNA | 29183862 | 29190061 | 29183862 | ID=Msa0204250-mRNA-1;Parent=Msa0204250;Name=Msa0204250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=208|1|1|1|0.83|0.71|7|313|902 |
| chr2_1 | exon | 29183862 | 29184038 | 29183862 | ID=Msa0204250-mRNA-1:exon:10480;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29185571 | 29186924 | 29185571 | ID=Msa0204250-mRNA-1:exon:10481;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29187033 | 29187719 | 29187033 | ID=Msa0204250-mRNA-1:exon:10482;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29187809 | 29187892 | 29187809 | ID=Msa0204250-mRNA-1:exon:10483;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29187981 | 29188056 | 29187981 | ID=Msa0204250-mRNA-1:exon:10484;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29188159 | 29188481 | 29188159 | ID=Msa0204250-mRNA-1:exon:10485;Parent=Msa0204250-mRNA-1 |
| chr2_1 | exon | 29189533 | 29190061 | 29189533 | ID=Msa0204250-mRNA-1:exon:10486;Parent=Msa0204250-mRNA-1 |
| chr2_1 | five_prime_UTR | 29183862 | 29184038 | 29183862 | ID=Msa0204250-mRNA-1:five_prime_utr;Parent=Msa0204250-mRNA-1 |
| chr2_1 | five_prime_UTR | 29185571 | 29185601 | 29185571 | ID=Msa0204250-mRNA-1:five_prime_utr;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29185602 | 29186924 | 29185602 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29187033 | 29187719 | 29187033 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29187809 | 29187892 | 29187809 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29187981 | 29188056 | 29187981 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29188159 | 29188481 | 29188159 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | CDS | 29189533 | 29189748 | 29189533 | ID=Msa0204250-mRNA-1:cds;Parent=Msa0204250-mRNA-1 |
| chr2_1 | three_prime_UTR | 29189749 | 29190061 | 29189749 | ID=Msa0204250-mRNA-1:three_prime_utr;Parent=Msa0204250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
