Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324890 | XP_024632581.1 | 98.559 | 902 | 12 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071090 | Msa0324890 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
| Msa0119090 | Msa0324890 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0124320 | Msa0324890 | 0.811356 | 7.293834e-51 | -8.615850e-47 |
| Msa0162430 | Msa0324890 | 0.807554 | 4.776758e-50 | -8.615850e-47 |
| Msa0171200 | Msa0324890 | 0.809216 | 2.111209e-50 | -8.615850e-47 |
| Msa0204250 | Msa0324890 | 0.829379 | 5.320722e-55 | -8.615850e-47 |
| Msa0206330 | Msa0324890 | 0.830160 | 3.434409e-55 | -8.615850e-47 |
| Msa0218460 | Msa0324890 | 0.806791 | 6.928426e-50 | -8.615850e-47 |
| Msa0220730 | Msa0324890 | 0.802245 | 6.147432e-49 | -8.615850e-47 |
| Msa0247400 | Msa0324890 | 0.835230 | 1.893473e-56 | -8.615850e-47 |
| Msa0249310 | Msa0324890 | 0.801772 | 7.691853e-49 | -8.615850e-47 |
| Msa0271790 | Msa0324890 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0287790 | Msa0324890 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
| Msa0324890 | Msa0328390 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0324890 | Msa0362890 | 0.808721 | 2.694443e-50 | -8.615850e-47 |
| Msa0324890 | Msa0371950 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa0324890 | Msa0380480 | 0.807793 | 4.249182e-50 | -8.615850e-47 |
| Msa0324890 | Msa0395980 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0324890 | Msa0623990 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0324890 | Msa0651560 | 0.800536 | 1.376423e-48 | -8.615850e-47 |
| Msa0324890 | Msa0662550 | 0.814806 | 1.277316e-51 | -8.615850e-47 |
| Msa0324890 | Msa0673120 | 0.865394 | 6.095395e-65 | -8.615850e-47 |
| Msa0324890 | Msa0797770 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
| Msa0324890 | Msa0899970 | 0.809946 | 1.471292e-50 | -8.615850e-47 |
| Msa0324890 | Msa0933760 | 0.808657 | 2.780570e-50 | -8.615850e-47 |
| Msa0324890 | Msa0965290 | 0.810827 | 9.497422e-51 | -8.615850e-47 |
| Msa0324890 | Msa0999680 | 0.805606 | 1.230713e-49 | -8.615850e-47 |
| Msa0324890 | Msa1034200 | 0.818527 | 1.870811e-52 | -8.615850e-47 |
| Msa0324890 | Msa1161810 | 0.816354 | 5.775957e-52 | -8.615850e-47 |
| Msa0324890 | Msa1340200 | 0.830787 | 2.412852e-55 | -8.615850e-47 |
| Msa0324890 | Msa1378410 | 0.802353 | 5.839737e-49 | -8.615850e-47 |
| Msa0324890 | Msa1438520 | 0.805887 | 1.074211e-49 | -8.615850e-47 |
| Msa0324890 | Msa1464090 | 0.811483 | 6.845617e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324890 | MtrunA17_Chr2g0302451 | 98.559 | 902 | 12 | 1 | 1 | 902 | 1 | 901 | 0.0 | 1868 |
| Msa0324890 | MtrunA17_Chr3g0112101 | 31.564 | 716 | 462 | 11 | 120 | 819 | 4 | 707 | 8.91e-111 | 358 |
| Msa0324890 | MtrunA17_Chr3g0126261 | 33.603 | 494 | 322 | 6 | 309 | 800 | 22 | 511 | 7.03e-91 | 299 |
| Msa0324890 | MtrunA17_Chr6g0454061 | 35.603 | 514 | 312 | 6 | 300 | 807 | 69 | 569 | 9.44e-88 | 292 |
| Msa0324890 | MtrunA17_Chr6g0455641 | 33.865 | 502 | 324 | 5 | 300 | 798 | 68 | 564 | 1.12e-87 | 292 |
| Msa0324890 | MtrunA17_Chr6g0454051 | 34.047 | 514 | 320 | 6 | 300 | 807 | 124 | 624 | 1.36e-82 | 280 |
| Msa0324890 | MtrunA17_Chr6g0454041 | 31.066 | 647 | 375 | 13 | 149 | 791 | 85 | 664 | 2.59e-79 | 272 |
| Msa0324890 | MtrunA17_Chr6g0476101 | 36.330 | 267 | 169 | 1 | 423 | 689 | 17 | 282 | 8.13e-54 | 189 |
| Msa0324890 | MtrunA17_Chr4g0010371 | 30.303 | 99 | 68 | 1 | 668 | 765 | 2 | 100 | 3.59e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324890 | AT3G17450.2 | 56.331 | 845 | 337 | 12 | 1 | 829 | 1 | 829 | 0.0 | 969 |
| Msa0324890 | AT3G17450.1 | 56.331 | 845 | 337 | 12 | 1 | 829 | 1 | 829 | 0.0 | 969 |
| Msa0324890 | AT4G15020.2 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 2.58e-105 | 344 |
| Msa0324890 | AT4G15020.1 | 33.381 | 701 | 419 | 16 | 114 | 791 | 1 | 676 | 2.58e-105 | 344 |
| Msa0324890 | AT3G22220.3 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.84e-103 | 338 |
| Msa0324890 | AT3G22220.4 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.84e-103 | 338 |
| Msa0324890 | AT3G22220.2 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.84e-103 | 338 |
| Msa0324890 | AT3G22220.1 | 31.844 | 716 | 458 | 18 | 114 | 819 | 1 | 696 | 3.84e-103 | 338 |
| Msa0324890 | AT1G79740.1 | 29.550 | 511 | 346 | 6 | 309 | 819 | 111 | 607 | 2.35e-77 | 265 |
| Msa0324890 | AT1G79740.4 | 29.550 | 511 | 346 | 6 | 309 | 819 | 111 | 607 | 2.35e-77 | 265 |
| Msa0324890 | AT1G79740.3 | 29.303 | 488 | 331 | 6 | 332 | 819 | 1 | 474 | 4.65e-74 | 253 |
| Msa0324890 | AT1G79740.2 | 29.303 | 488 | 331 | 6 | 332 | 819 | 1 | 474 | 4.65e-74 | 253 |
| Msa0324890 | AT3G13020.1 | 26.426 | 666 | 410 | 18 | 137 | 793 | 10 | 604 | 6.09e-69 | 241 |
| Msa0324890 | AT3G13030.3 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.91e-59 | 211 |
| Msa0324890 | AT3G13030.4 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.91e-59 | 211 |
| Msa0324890 | AT3G13030.1 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.91e-59 | 211 |
| Msa0324890 | AT3G13030.2 | 27.824 | 478 | 329 | 8 | 319 | 790 | 62 | 529 | 5.91e-59 | 211 |
| Msa0324890 | AT3G13010.1 | 28.398 | 493 | 324 | 12 | 310 | 793 | 99 | 571 | 2.45e-54 | 199 |
| Msa0324890 | AT3G13030.5 | 28.092 | 477 | 296 | 10 | 319 | 790 | 62 | 496 | 6.24e-51 | 187 |
| Msa0324890 | AT5G33406.1 | 28.530 | 347 | 235 | 4 | 511 | 856 | 1 | 335 | 1.40e-44 | 169 |
| Msa0324890 | AT1G43260.1 | 33.333 | 225 | 148 | 2 | 318 | 541 | 47 | 270 | 1.49e-37 | 143 |
| Msa0324890 | AT5G31412.1 | 37.879 | 132 | 80 | 1 | 353 | 484 | 110 | 239 | 9.72e-21 | 96.7 |
| Msa0324890 | AT1G36095.1 | 31.176 | 170 | 116 | 1 | 412 | 581 | 131 | 299 | 3.03e-20 | 92.8 |
Find 218 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTCTCAACGCTGGTTC+TGG | 0.154626 | 2_4:-30856793 | None:intergenic |
| CAGCATTTAGCCCGAGTTTC+TGG | 0.174313 | 2_4:+30856136 | Msa0324890:CDS |
| CCCATCCAGCCAACTTATTT+CGG | 0.211422 | 2_4:+30857038 | Msa0324890:CDS |
| TTCAGCAAGATAATTCTTAA+TGG | 0.235713 | 2_4:-30857088 | None:intergenic |
| ACTATGTTCATTTCATCTAT+TGG | 0.240523 | 2_4:+30860114 | Msa0324890:three_prime_UTR |
| CAGTTGTGGGCCTGTATTAT+TGG | 0.241415 | 2_4:+30860047 | Msa0324890:three_prime_UTR |
| ATTAGAGGACATTCCCTTAA+AGG | 0.245359 | 2_4:-30856764 | None:intergenic |
| GGCGGTGGAGGTAGAGTTTC+AGG | 0.250554 | 2_4:-30854367 | None:intergenic |
| ACAACATTTGGCTAGGATTC+CGG | 0.260414 | 2_4:+30856501 | Msa0324890:CDS |
| CCATCCAGCCAACTTATTTC+GGG | 0.265939 | 2_4:+30857039 | Msa0324890:CDS |
| AACATATTTATTTAAGCTTT+TGG | 0.267928 | 2_4:+30857263 | Msa0324890:CDS |
| GAATTATCTTGCTGAATATA+AGG | 0.282596 | 2_4:+30857095 | Msa0324890:CDS |
| CATTAACTTTCTTCTGTGAT+AGG | 0.284701 | 2_4:-30858703 | None:intergenic |
| AGATACAGGAAAGACCTTTA+AGG | 0.304417 | 2_4:+30856750 | Msa0324890:CDS |
| CTCTTTCCCCTGGCTTGAAC+TGG | 0.307893 | 2_4:-30857793 | None:intergenic |
| CAACATTTGGCTAGGATTCC+GGG | 0.313749 | 2_4:+30856502 | Msa0324890:CDS |
| AACTAATATACAATCAAATA+TGG | 0.313840 | 2_4:+30857607 | Msa0324890:CDS |
| CACGGAAATATGAGCCATTC+TGG | 0.321607 | 2_4:+30857997 | Msa0324890:CDS |
| AAAGGAGAAGGAATTTGTTC+TGG | 0.322409 | 2_4:+30857487 | Msa0324890:CDS |
| GAAAAGCTGGGATATATAAA+AGG | 0.325977 | 2_4:+30860266 | Msa0324890:three_prime_UTR |
| ATCTTCTCAACGCTGGTTCT+GGG | 0.327767 | 2_4:-30856792 | None:intergenic |
| TTGCTGAATATAAGGCTTCC+TGG | 0.330441 | 2_4:+30857103 | Msa0324890:CDS |
| TAATAGATTTAAACAACATT+TGG | 0.335959 | 2_4:+30856489 | Msa0324890:CDS |
| GAATGTTTCTTTCAAACAAA+TGG | 0.339612 | 2_4:+30857754 | Msa0324890:CDS |
| AGATGACTTTGGAACTGAAT+TGG | 0.347315 | 2_4:+30858406 | Msa0324890:CDS |
| CTGGAATTGGCTGGTCAATA+TGG | 0.351924 | 2_4:+30857000 | Msa0324890:CDS |
| TTCCCAGCAGCTTTATAGTT+AGG | 0.352395 | 2_4:-30857453 | None:intergenic |
| GTTCGGTTGTTGACGAAAAT+CGG | 0.352536 | 2_4:-30854296 | None:intergenic |
| TGCTACATTGCAGAATTTGT+TGG | 0.356863 | 2_4:+30857710 | Msa0324890:CDS |
| GATACAGGAAAGACCTTTAA+GGG | 0.362013 | 2_4:+30856751 | Msa0324890:CDS |
| AATCACTGGTTGTTCGATAA+TGG | 0.364280 | 2_4:+30857128 | Msa0324890:CDS |
| GAGAATGCCAAGTAAGAAAA+AGG | 0.364495 | 2_4:+30858759 | Msa0324890:CDS |
| AAACAAAATCTTGACGATAT+CGG | 0.369198 | 2_4:-30858097 | None:intergenic |
| ATTGTGGAGGAATAAGGATT+TGG | 0.371031 | 2_4:+30860020 | Msa0324890:three_prime_UTR |
| CTTGCAATCAAATCTATTCA+TGG | 0.376674 | 2_4:+30857966 | Msa0324890:CDS |
| TCTTACAATAAATATATCAT+TGG | 0.380029 | 2_4:-30860159 | None:intergenic |
| GTGAGTTGAGGTTGAATTAC+TGG | 0.381146 | 2_4:-30854264 | None:intergenic |
| TTAACTCCTCTTCGGTCCTT+AGG | 0.382982 | 2_4:+30856370 | Msa0324890:CDS |
| TCATCTTCATTATCAGACTT+TGG | 0.384649 | 2_4:-30856649 | None:intergenic |
| GACAAAGTAGTGGAAGAAAT+AGG | 0.386856 | 2_4:+30857285 | Msa0324890:CDS |
| TTCCCATGAGCTGGTTACTA+TGG | 0.389104 | 2_4:+30859875 | Msa0324890:CDS |
| AAGCTTTGATTGATAATGAT+AGG | 0.396713 | 2_4:+30856716 | Msa0324890:CDS |
| GTTGATCCTGGTTGGGATCA+TGG | 0.396999 | 2_4:+30856031 | Msa0324890:CDS |
| GAATTGCGATAGCTCTCATT+TGG | 0.397246 | 2_4:+30855976 | Msa0324890:five_prime_UTR |
| AGGATTTGTTGATCCTGGTT+GGG | 0.401216 | 2_4:+30856024 | Msa0324890:CDS |
| CAGGATTTGTTGATCCTGGT+TGG | 0.401261 | 2_4:+30856023 | Msa0324890:CDS |
| TGCATCTTCAACTACATTAG+TGG | 0.404393 | 2_4:-30857241 | None:intergenic |
| TTATCAGACTTTGGATAGAA+AGG | 0.411222 | 2_4:-30856640 | None:intergenic |
| TCCACAGGATTTGTTGATCC+TGG | 0.414673 | 2_4:+30856019 | Msa0324890:CDS |
| TGGTTCTGGGCTAGTATTAG+AGG | 0.417393 | 2_4:-30856779 | None:intergenic |
| TCAAACTTGCAAACAACTAA+AGG | 0.417490 | 2_4:+30856861 | Msa0324890:CDS |
| CATAAAATGCTGGAATTGGC+TGG | 0.424079 | 2_4:+30856991 | Msa0324890:CDS |
| CACAGGGAAGCCAATAATAC+AGG | 0.429876 | 2_4:-30860057 | None:intergenic |
| GATCCAGATCGAAGTGGAAT+CGG | 0.435638 | 2_4:-30854388 | None:intergenic |
| CAATAATACAGGCCCACAAC+TGG | 0.436114 | 2_4:-30860046 | None:intergenic |
| AATTCAGCTCAAGATGACTT+TGG | 0.436462 | 2_4:+30858395 | Msa0324890:CDS |
| CCGAAATAAGTTGGCTGGAT+GGG | 0.437278 | 2_4:-30857038 | None:intergenic |
| ACTCCTAACTATAAAGCTGC+TGG | 0.439048 | 2_4:+30857450 | Msa0324890:CDS |
| ATGTATATAACGACTTGTAC+AGG | 0.442939 | 2_4:+30857937 | Msa0324890:CDS |
| TACAAGTCGTTATATACATA+TGG | 0.444904 | 2_4:-30857933 | None:intergenic |
| GAAGCACACTGGGTGCCAGC+TGG | 0.445938 | 2_4:-30857681 | None:intergenic |
| TGTAGAAGAGTGCATGGAAA+AGG | 0.446118 | 2_4:+30857569 | Msa0324890:CDS |
| TCATCTAGATCAACACCAAA+AGG | 0.447915 | 2_4:-30859792 | None:intergenic |
| CTGGCTTGAACTGGAGAACC+TGG | 0.450018 | 2_4:-30857784 | None:intergenic |
| TTCCTTGCGTAATTTCTTAG+TGG | 0.450982 | 2_4:-30856896 | None:intergenic |
| AAGACGATGAAGAGCAAGTT+GGG | 0.451975 | 2_4:+30856296 | Msa0324890:CDS |
| AGGATTTGGTTGCCAGTTGT+GGG | 0.457361 | 2_4:+30860034 | Msa0324890:three_prime_UTR |
| CTGTAAATTTAACTCCTCTT+CGG | 0.460622 | 2_4:+30856362 | Msa0324890:CDS |
| ACAAATCCTGTGGAGCGTAT+TGG | 0.462386 | 2_4:-30856010 | None:intergenic |
| AAGGATTTGGTTGCCAGTTG+TGG | 0.462411 | 2_4:+30860033 | Msa0324890:three_prime_UTR |
| CAAACAAATGGATGTCATCC+AGG | 0.463821 | 2_4:+30857766 | Msa0324890:CDS |
| CAGGTTCTCCAGTTCAAGCC+AGG | 0.466832 | 2_4:+30857785 | Msa0324890:CDS |
| GCAGATCATGCTAACATTGA+TGG | 0.469084 | 2_4:+30859924 | Msa0324890:CDS |
| TTACAAGGTGCTACCTCTCC+CGG | 0.469285 | 2_4:-30856520 | None:intergenic |
| GTTCGATAATGGCTGATAGT+TGG | 0.469340 | 2_4:+30857139 | Msa0324890:CDS |
| AGGAGATACTGTAAAGATAC+AGG | 0.472813 | 2_4:+30856736 | Msa0324890:CDS |
| CGAAGTGGAATCGGCGGTGG+AGG | 0.474735 | 2_4:-30854379 | None:intergenic |
| TTTCTTGTTTCATCTCCTCA+TGG | 0.477086 | 2_4:+30857192 | Msa0324890:CDS |
| GTGGGAACACGGTGTTGCTC+AGG | 0.477649 | 2_4:+30856408 | Msa0324890:CDS |
| AAGCAAAGGAAAGCAATTGA+TGG | 0.478129 | 2_4:+30856324 | Msa0324890:CDS |
| TTACCTCACTAGCTGCTTGG+TGG | 0.478382 | 2_4:+30858549 | Msa0324890:intron |
| GTTTGAAGATTCTGATTTGT+GGG | 0.479122 | 2_4:-30856844 | None:intergenic |
| TACTGTGAGAAAGTTGTTAG+TGG | 0.482355 | 2_4:+30856460 | Msa0324890:CDS |
| GTTGTTGACGAAAATCGGTT+AGG | 0.484609 | 2_4:-30854291 | None:intergenic |
| TCCTTGCGTAATTTCTTAGT+GGG | 0.485270 | 2_4:-30856895 | None:intergenic |
| TAGCTCTCATTTGGATGTAA+TGG | 0.485369 | 2_4:+30855985 | Msa0324890:exon |
| TTTGGCTAGGATTCCGGGAG+AGG | 0.486181 | 2_4:+30856507 | Msa0324890:CDS |
| ACATAGGCAACCCGAGGGTA+AGG | 0.487674 | 2_4:+30856609 | Msa0324890:CDS |
| CCGCCGATTCCACTTCGATC+TGG | 0.488168 | 2_4:+30854385 | Msa0324890:five_prime_UTR |
| TGATAGTTGGAGAGATGCAC+AGG | 0.488405 | 2_4:+30857152 | Msa0324890:CDS |
| TTGGCAATTAGCACAAGAAC+AGG | 0.492641 | 2_4:+30858425 | Msa0324890:CDS |
| CATATTGCAAGTGTTTCAAA+AGG | 0.493903 | 2_4:+30857884 | Msa0324890:CDS |
| AGATGACGAGTATGAGCAGC+AGG | 0.496541 | 2_4:+30856666 | Msa0324890:CDS |
| TGGATCTGAAAGGCATCTAA+AGG | 0.499713 | 2_4:+30859851 | Msa0324890:CDS |
| TGAAGTAACATACTGTGAAA+AGG | 0.499819 | 2_4:+30856159 | Msa0324890:CDS |
| GCAACACCGTGTTCCCACCC+TGG | 0.504664 | 2_4:-30856403 | None:intergenic |
| CTGTCTATCACCTTCCAGAA+TGG | 0.505410 | 2_4:-30858011 | None:intergenic |
| GCGACCCGAAATAAGTTGGC+TGG | 0.508113 | 2_4:-30857043 | None:intergenic |
| AGATTTAGCTGTGTTTGTCA+TGG | 0.508667 | 2_4:+30860240 | Msa0324890:three_prime_UTR |
| TGCTGAATATAAGGCTTCCT+GGG | 0.512753 | 2_4:+30857104 | Msa0324890:CDS |
| AAATAAAAGAGAATATGAAA+TGG | 0.513526 | 2_4:+30856569 | Msa0324890:CDS |
| GATCGAAGTGGAATCGGCGG+TGG | 0.515102 | 2_4:-30854382 | None:intergenic |
| CGGTGGAAGATCGACGGCGG+TGG | 0.515682 | 2_4:-30854323 | None:intergenic |
| CTCCTAACTATAAAGCTGCT+GGG | 0.516115 | 2_4:+30857451 | Msa0324890:CDS |
| CGCGCCGGGTCGAGTTAAGA+AGG | 0.516679 | 2_4:+30854235 | None:intergenic |
| AGGTGAAGAAAATGTAGTGC+AGG | 0.518522 | 2_4:+30857305 | Msa0324890:CDS |
| AAGTAAGCAGCCAAGTAAAG+AGG | 0.521409 | 2_4:-30858059 | None:intergenic |
| GGATCTGAAAGGCATCTAAA+GGG | 0.523160 | 2_4:+30859852 | Msa0324890:CDS |
| GGAGGTAGAGTTTCAGGCGG+TGG | 0.523670 | 2_4:-30854340 | None:intergenic |
| GATTCAATAGACTATGATGA+TGG | 0.524240 | 2_4:+30859831 | Msa0324890:CDS |
| CAGTTCAAGCCAGGGGAAAG+AGG | 0.525879 | 2_4:+30857794 | Msa0324890:CDS |
| ATGAAAAGTGAATTTACCCA+TGG | 0.526104 | 2_4:+30857642 | Msa0324890:CDS |
| GAAAGCAATTGATGGATGGC+AGG | 0.527166 | 2_4:+30856332 | Msa0324890:CDS |
| CAGCCATAGTAACCAGCTCA+TGG | 0.528043 | 2_4:-30859878 | None:intergenic |
| TACTGTGGGAAAGTTGTTAG+TGG | 0.528153 | 2_4:+30856094 | Msa0324890:CDS |
| GTCTGAATGAATGCATTGTT+CGG | 0.528690 | 2_4:+30858230 | Msa0324890:CDS |
| CAACACCGTGTTCCCACCCT+GGG | 0.529812 | 2_4:-30856402 | None:intergenic |
| AACATACTGTGAAAAGGCTC+CGG | 0.529848 | 2_4:+30856165 | Msa0324890:CDS |
| AGTTTGAAGATTCTGATTTG+TGG | 0.530141 | 2_4:-30856845 | None:intergenic |
| AAGGCTTCCTGGGCAATCAC+TGG | 0.530608 | 2_4:+30857114 | Msa0324890:CDS |
| CATCTAGATCAACACCAAAA+GGG | 0.531085 | 2_4:-30859791 | None:intergenic |
| TCGACGGCGGTGGAATCGTT+CGG | 0.531682 | 2_4:-30854313 | None:intergenic |
| CATTCTGGAAGGTGATAGAC+AGG | 0.532154 | 2_4:+30858012 | Msa0324890:CDS |
| ATGTTACTTCACCAGAAACT+CGG | 0.532770 | 2_4:-30856147 | None:intergenic |
| CAGATCCGACTCATCGTCAC+TGG | 0.533981 | 2_4:-30859949 | None:intergenic |
| CCCGAAATAAGTTGGCTGGA+TGG | 0.536151 | 2_4:-30857039 | None:intergenic |
| GATTTAAACAACATTTGGCT+AGG | 0.537741 | 2_4:+30856494 | Msa0324890:CDS |
| GCTTTAGAAGCTCATTCCCA+TGG | 0.538107 | 2_4:-30857659 | None:intergenic |
| CTGGGAAAATGCTTGAAGAA+AGG | 0.538331 | 2_4:+30857469 | Msa0324890:CDS |
| CCCTGGGTCAACATATCCTA+AGG | 0.538425 | 2_4:-30856386 | None:intergenic |
| ACGGAGTCTGCAGCTTGTAA+AGG | 0.542641 | 2_4:-30856961 | None:intergenic |
| AAAAGCGACCCGAAATAAGT+TGG | 0.544977 | 2_4:-30857047 | None:intergenic |
| CAAGTTGGGTGTAGAAGCAA+AGG | 0.546966 | 2_4:+30856310 | Msa0324890:CDS |
| GGCATCAGATCCTTACCCTC+GGG | 0.551027 | 2_4:-30856619 | None:intergenic |
| AATATGAAATGGCATCGCAC+TGG | 0.551192 | 2_4:+30856580 | Msa0324890:CDS |
| ACAACATGGAATAAGTTGCT+TGG | 0.551673 | 2_4:+30858574 | Msa0324890:CDS |
| TCCTTAGGATATGTTGACCC+AGG | 0.553110 | 2_4:+30856385 | Msa0324890:CDS |
| AAGAGCACTTACTTGCTGAC+TGG | 0.555352 | 2_4:+30858822 | Msa0324890:CDS |
| TAGATGTGTAGAAGAGTGCA+TGG | 0.555568 | 2_4:+30857563 | Msa0324890:CDS |
| TTTGTCATGGAAAGAAAAGC+TGG | 0.557149 | 2_4:+30860253 | Msa0324890:three_prime_UTR |
| TCTAAAGGGTTCCCATGAGC+TGG | 0.557230 | 2_4:+30859866 | Msa0324890:CDS |
| TGTGGGAAAGTTGTTAGTGG+TGG | 0.558139 | 2_4:+30856097 | Msa0324890:CDS |
| GTAGAAGAGTGCATGGAAAA+GGG | 0.564298 | 2_4:+30857570 | Msa0324890:CDS |
| TGGTCAATATGGACAAGGAC+TGG | 0.565647 | 2_4:+30857011 | Msa0324890:CDS |
| CTATTCATGGCGATGATGCA+CGG | 0.567695 | 2_4:+30857979 | Msa0324890:CDS |
| ATGGCTCCAATACGCTCCAC+AGG | 0.568838 | 2_4:+30856004 | Msa0324890:CDS |
| GGATCTTCTTCCGTACGTTG+AGG | 0.573648 | 2_4:+30854406 | Msa0324890:five_prime_UTR |
| AGGCATCAGATCCTTACCCT+CGG | 0.574066 | 2_4:-30856620 | None:intergenic |
| GAGTGAGTAATCAAGTTACA+AGG | 0.574681 | 2_4:+30859992 | Msa0324890:exon |
| CTTTAGAAGCTCATTCCCAT+GGG | 0.577632 | 2_4:-30857658 | None:intergenic |
| AATCTTGATCTTCTCAACGC+TGG | 0.579689 | 2_4:-30856799 | None:intergenic |
| TCATTTCATCTATTGGAGCA+TGG | 0.579898 | 2_4:+30860121 | Msa0324890:three_prime_UTR |
| ACCACTGCACAAAGCTCTGA+TGG | 0.580910 | 2_4:+30858854 | Msa0324890:CDS |
| AATGAGCTTCTAAAGCCAGC+TGG | 0.582059 | 2_4:+30857666 | Msa0324890:CDS |
| AAACAACTAAAGGTTAAGAC+AGG | 0.582514 | 2_4:+30856871 | Msa0324890:CDS |
| GGAAGAAAATGCAGTATGTG+AGG | 0.583624 | 2_4:+30857847 | Msa0324890:CDS |
| GAGCTGGTTACTATGGCTGA+TGG | 0.584016 | 2_4:+30859882 | Msa0324890:CDS |
| AAATGCTTGAAGAAAGGAGA+AGG | 0.584761 | 2_4:+30857475 | Msa0324890:CDS |
| AAAATGAAGGAAAATCTGGA+AGG | 0.590836 | 2_4:+30856202 | Msa0324890:CDS |
| AAAATCAAGATGGTCGTCAT+CGG | 0.592207 | 2_4:+30860081 | Msa0324890:three_prime_UTR |
| AGCAAAGCTAGAAGCACACT+GGG | 0.592642 | 2_4:-30857691 | None:intergenic |
| AGCCATAGTAACCAGCTCAT+GGG | 0.593805 | 2_4:-30859877 | None:intergenic |
| AGGTTAGATGCAATTACTGT+GGG | 0.594300 | 2_4:+30856080 | Msa0324890:CDS |
| TGTTACTTCACCAGAAACTC+GGG | 0.594532 | 2_4:-30856146 | None:intergenic |
| ACTATGGCTGATGGAGCAGT+AGG | 0.594939 | 2_4:+30859891 | Msa0324890:CDS |
| TAGCAAAGCTAGAAGCACAC+TGG | 0.595235 | 2_4:-30857692 | None:intergenic |
| CGGTTAGGAATCGTGAGTTG+AGG | 0.597930 | 2_4:-30854276 | None:intergenic |
| TCTTGAGCTGAATTATAATG+AGG | 0.598079 | 2_4:-30858386 | None:intergenic |
| ACCATCAGAGCTTTGTGCAG+TGG | 0.599060 | 2_4:-30858855 | None:intergenic |
| TAGAGAACAACCTCAACGTA+CGG | 0.599132 | 2_4:-30854416 | None:intergenic |
| AAAGGAAAGCAATTGATGGA+TGG | 0.603413 | 2_4:+30856328 | Msa0324890:CDS |
| TTCAGGCGGTGGAAGATCGA+CGG | 0.605865 | 2_4:-30854329 | None:intergenic |
| AGGTTCTCCAGTTCAAGCCA+GGG | 0.607330 | 2_4:+30857786 | Msa0324890:CDS |
| AGGATATGTTGACCCAGGGT+GGG | 0.611188 | 2_4:+30856390 | Msa0324890:CDS |
| GTTGACCCAGGGTGGGAACA+CGG | 0.611332 | 2_4:+30856397 | Msa0324890:CDS |
| TGAAAAGTGAATTTACCCAT+GGG | 0.616274 | 2_4:+30857643 | Msa0324890:CDS |
| ACAAAGCTCTGATGGTGACA+AGG | 0.616552 | 2_4:+30858862 | Msa0324890:CDS |
| TCTTGACGATATCGGTATGA+CGG | 0.616642 | 2_4:-30858089 | None:intergenic |
| CCTTAGGATATGTTGACCCA+GGG | 0.617378 | 2_4:+30856386 | Msa0324890:CDS |
| AAATGAAGGAAAATCTGGAA+GGG | 0.618504 | 2_4:+30856203 | Msa0324890:CDS |
| AAGGTTAGATGCAATTACTG+TGG | 0.618593 | 2_4:+30856079 | Msa0324890:CDS |
| TTGTAGAACATTCTCAGCAG+AGG | 0.619249 | 2_4:-30858801 | None:intergenic |
| GCTGCTTGGTGGCAACAACA+TGG | 0.620763 | 2_4:+30858560 | Msa0324890:intron |
| GAAATATGAGCCATTCTGGA+AGG | 0.621062 | 2_4:+30858001 | Msa0324890:CDS |
| GAAGACGATGAAGAGCAAGT+TGG | 0.621085 | 2_4:+30856295 | Msa0324890:CDS |
| TAGGATATGTTGACCCAGGG+TGG | 0.622379 | 2_4:+30856389 | Msa0324890:CDS |
| ACAAGAACAGGTCTTGAACC+AGG | 0.622503 | 2_4:+30858437 | Msa0324890:CDS |
| CGAACAACCAGTGATTGCCC+AGG | 0.630440 | 2_4:-30857121 | None:intergenic |
| TTGTCATGGAAAGAAAAGCT+GGG | 0.635762 | 2_4:+30860254 | Msa0324890:three_prime_UTR |
| GTTGGAGAGATGCACAGGGT+AGG | 0.638423 | 2_4:+30857157 | Msa0324890:CDS |
| ACCAGGATCAACAAATCCTG+TGG | 0.638687 | 2_4:-30856020 | None:intergenic |
| TGTGAGAAAGTTGTTAGTGG+CGG | 0.639509 | 2_4:+30856463 | Msa0324890:CDS |
| TGAGTTGAGGTTGAATTACT+GGG | 0.639974 | 2_4:-30854263 | None:intergenic |
| GTGTTTCAAAAGGTGTCTAG+TGG | 0.640607 | 2_4:+30857894 | Msa0324890:CDS |
| TGTCTGACTTAATATGCGAA+CGG | 0.644471 | 2_4:-30858612 | None:intergenic |
| TGTATATAACGACTTGTACA+GGG | 0.644698 | 2_4:+30857938 | Msa0324890:CDS |
| GCAATGCCATGATCCCAACC+AGG | 0.647244 | 2_4:-30856037 | None:intergenic |
| ATACTGTGAAAAGGCTCCGG+AGG | 0.649046 | 2_4:+30856168 | Msa0324890:CDS |
| ACCCACTAAGAAATTACGCA+AGG | 0.652287 | 2_4:+30856894 | Msa0324890:CDS |
| GAAGAAGATCCAGATCGAAG+TGG | 0.652956 | 2_4:-30854394 | None:intergenic |
| GTGGGAAAGTTGTTAGTGGT+GGG | 0.655583 | 2_4:+30856098 | Msa0324890:CDS |
| ATGGCATTGCTCAAGATGAG+CGG | 0.658795 | 2_4:+30856050 | Msa0324890:CDS |
| TGGTGCCAGTGACGATGAGT+CGG | 0.666465 | 2_4:+30859944 | Msa0324890:CDS |
| TACTTTGCATCATATGAACA+AGG | 0.667545 | 2_4:+30856693 | Msa0324890:CDS |
| GAAACAAAGTATACACCATG+AGG | 0.669038 | 2_4:-30857207 | None:intergenic |
| CCAGATCGAAGTGGAATCGG+CGG | 0.669399 | 2_4:-30854385 | None:intergenic |
| TTGGCTGGTCAATATGGACA+AGG | 0.674064 | 2_4:+30857006 | Msa0324890:CDS |
| GGTTCTCCAGTTCAAGCCAG+GGG | 0.675328 | 2_4:+30857787 | Msa0324890:CDS |
| GAGACCTTCTTAACTCGACC+CGG | 0.678300 | 2_4:-30854239 | None:intergenic |
| AAAAGACATAGGCAACCCGA+GGG | 0.683630 | 2_4:+30856604 | Msa0324890:CDS |
| ACATATCCTAAGGACCGAAG+AGG | 0.686475 | 2_4:-30856376 | None:intergenic |
| TTTCATCTATTGGAGCATGG+TGG | 0.711455 | 2_4:+30860124 | Msa0324890:three_prime_UTR |
| AGGCGGTGGAAGATCGACGG+CGG | 0.718090 | 2_4:-30854326 | None:intergenic |
| TTAATACAATAGATAGCACA+AGG | 0.720093 | 2_4:-30857513 | None:intergenic |
| ACTATGATGATGGATCTGAA+AGG | 0.723341 | 2_4:+30859841 | Msa0324890:CDS |
| TAGCATTCTGATGTAGTACG+TGG | 0.728853 | 2_4:+30858208 | Msa0324890:intron |
| CTTGTAAAGGAATTCCTGCG+TGG | 0.735670 | 2_4:-30856948 | None:intergenic |
| GATAGTTGGAGAGATGCACA+GGG | 0.743814 | 2_4:+30857153 | Msa0324890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTTTTTACAGTT+AGG | + | chr2_4:30854604-30854623 | Msa0324890:intron | 10.0% |
| !!! | TATAATTTTTTTTACAGTTA+GGG | + | chr2_4:30854605-30854624 | Msa0324890:intron | 10.0% |
| !! | GGTAATAATTAAATAATATA+AGG | + | chr2_4:30859080-30859099 | Msa0324890:intron | 10.0% |
| !!! | TTATCTTTTTCATTTTTTAA+GGG | - | chr2_4:30859692-30859711 | None:intergenic | 10.0% |
| !!! | ATTATCTTTTTCATTTTTTA+AGG | - | chr2_4:30859693-30859712 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTCAGAAAATTT+AGG | + | chr2_4:30854503-30854522 | Msa0324890:intron | 15.0% |
| !! | AAAATTTAGGTATTTGTATA+TGG | + | chr2_4:30854516-30854535 | Msa0324890:intron | 15.0% |
| !! | TATTAAGTAAATCAAAAGAT+TGG | + | chr2_4:30855172-30855191 | Msa0324890:intron | 15.0% |
| !!! | CTCTTATGTATTTTTTTTTA+AGG | + | chr2_4:30855752-30855771 | Msa0324890:intron | 15.0% |
| !! | TAATAGATTTAAACAACATT+TGG | + | chr2_4:30856489-30856508 | Msa0324890:CDS | 15.0% |
| !! | AAATAAAAGAGAATATGAAA+TGG | + | chr2_4:30856569-30856588 | Msa0324890:CDS | 15.0% |
| !!! | AACATATTTATTTAAGCTTT+TGG | + | chr2_4:30857263-30857282 | Msa0324890:CDS | 15.0% |
| !!! | ATATTAGTTTTGTAATTTTC+TGG | - | chr2_4:30857596-30857615 | None:intergenic | 15.0% |
| !! | AACTAATATACAATCAAATA+TGG | + | chr2_4:30857607-30857626 | Msa0324890:CDS | 15.0% |
| !!! | TAATAAAAACTTACTTCTTT+TGG | - | chr2_4:30859141-30859160 | None:intergenic | 15.0% |
| !! | TTATTATATGTTGAAACTAT+TGG | + | chr2_4:30859569-30859588 | Msa0324890:intron | 15.0% |
| !!! | TATCTTTTTCATTTTTTAAG+GGG | - | chr2_4:30859691-30859710 | None:intergenic | 15.0% |
| !! | TCTTACAATAAATATATCAT+TGG | - | chr2_4:30860162-30860181 | None:intergenic | 15.0% |
| !!! | TTTTTATCAGTTGATTTTTC+AGG | + | chr2_4:30854542-30854561 | Msa0324890:intron | 20.0% |
| !! | CGTACAAAATCATTAAATTA+CGG | - | chr2_4:30854961-30854980 | None:intergenic | 20.0% |
| !!! | GTTGCCTTTTAAATTTATAT+GGG | + | chr2_4:30855410-30855429 | Msa0324890:intron | 20.0% |
| !! | AACACCCATATAAATTTAAA+AGG | - | chr2_4:30855417-30855436 | None:intergenic | 20.0% |
| !! | ATACTTTGTTGACATTAAAA+AGG | - | chr2_4:30855701-30855720 | None:intergenic | 20.0% |
| !!! | ATTTTAAGATAAACTTCTTC+TGG | - | chr2_4:30856553-30856572 | None:intergenic | 20.0% |
| !!! | CAGCATTTTATGAAAATATA+CGG | - | chr2_4:30856983-30857002 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTTCTATTCTTG+TGG | + | chr2_4:30857338-30857357 | Msa0324890:intron | 20.0% |
| !! | CCATTAGAAAAATATTATTC+TGG | - | chr2_4:30858130-30858149 | None:intergenic | 20.0% |
| !!! | CCAGAATAATATTTTTCTAA+TGG | + | chr2_4:30858127-30858146 | Msa0324890:intron | 20.0% |
| !! | TATAAAACATATATAGTGCA+TGG | - | chr2_4:30858977-30858996 | None:intergenic | 20.0% |
| !! | ATACAAGTGTAATGAAAAAA+AGG | + | chr2_4:30859312-30859331 | Msa0324890:intron | 20.0% |
| !!! | TTGATTTTTCAGGTTATGTT+TGG | + | chr2_4:30854552-30854571 | Msa0324890:intron | 25.0% |
| !!! | TTTTTTACAGTTAGGGTTTA+AGG | + | chr2_4:30854612-30854631 | Msa0324890:intron | 25.0% |
| ! | CAACATGTAATTCAAAATGA+AGG | - | chr2_4:30854713-30854732 | None:intergenic | 25.0% |
| !! | TTGAATTACATGTTGCATTT+TGG | + | chr2_4:30854718-30854737 | Msa0324890:intron | 25.0% |
| ! | AAAAGTTATCTGATCCAAAT+TGG | - | chr2_4:30854811-30854830 | None:intergenic | 25.0% |
| !! | TCATAAAATTTTCCTTAGCA+TGG | + | chr2_4:30854995-30855014 | Msa0324890:intron | 25.0% |
| ! | GATTTACTTAATAAGCAACA+AGG | - | chr2_4:30855165-30855184 | None:intergenic | 25.0% |
| !!! | TAATGAGTTGATTCTTTTGT+TGG | + | chr2_4:30855276-30855295 | Msa0324890:intron | 25.0% |
| ! | AGATAATTAGAGACATGAAA+AGG | + | chr2_4:30855354-30855373 | Msa0324890:intron | 25.0% |
| !! | AATATAGAATTTGCTCAAGT+TGG | + | chr2_4:30855378-30855397 | Msa0324890:intron | 25.0% |
| !! | ATATAGAATTTGCTCAAGTT+GGG | + | chr2_4:30855379-30855398 | Msa0324890:intron | 25.0% |
| ! | ATAAATTTAAAAGGCAACCA+AGG | - | chr2_4:30855408-30855427 | None:intergenic | 25.0% |
| !! | GGTTGCCTTTTAAATTTATA+TGG | + | chr2_4:30855409-30855428 | Msa0324890:intron | 25.0% |
| ! | ATTGATGTAATGTGGAATTA+GGG | + | chr2_4:30855476-30855495 | Msa0324890:intron | 25.0% |
| !! | ACAATAATCTTCAAGAGTTT+TGG | - | chr2_4:30855559-30855578 | None:intergenic | 25.0% |
| ! | AGTATTCTGACAAAAATCAA+GGG | - | chr2_4:30855641-30855660 | None:intergenic | 25.0% |
| ! | ATGCTTTGTAACAAATTTCA+AGG | - | chr2_4:30855665-30855684 | None:intergenic | 25.0% |
| !!! | ACAAAGTATTGATGTTTCTT+TGG | + | chr2_4:30855712-30855731 | Msa0324890:intron | 25.0% |
| ! | AATACATAAGAGAAAGCAAA+AGG | - | chr2_4:30855744-30855763 | None:intergenic | 25.0% |
| ! | ATGCTTGAAAATTAAAGCAA+AGG | - | chr2_4:30855804-30855823 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTAGAGATTT+TGG | + | chr2_4:30855831-30855850 | Msa0324890:intron | 25.0% |
| !!! | AAGCTTTGATTGATAATGAT+AGG | + | chr2_4:30856716-30856735 | Msa0324890:CDS | 25.0% |
| !! | CGTATATTTTCATAAAATGC+TGG | + | chr2_4:30856981-30857000 | Msa0324890:CDS | 25.0% |
| !! | TTTTCATAAAATGCTGGAAT+TGG | + | chr2_4:30856987-30857006 | Msa0324890:CDS | 25.0% |
| ! | TTCAGCAAGATAATTCTTAA+TGG | - | chr2_4:30857091-30857110 | None:intergenic | 25.0% |
| ! | GAATTATCTTGCTGAATATA+AGG | + | chr2_4:30857095-30857114 | Msa0324890:CDS | 25.0% |
| ! | CAAGTTAATATTTACGATGA+AGG | - | chr2_4:30857370-30857389 | None:intergenic | 25.0% |
| ! | ACTTGTATCTGTAATTAATC+TGG | + | chr2_4:30857385-30857404 | Msa0324890:intron | 25.0% |
| ! | AGTTATTACCTACATCAAAA+GGG | - | chr2_4:30857424-30857443 | None:intergenic | 25.0% |
| ! | TTAATACAATAGATAGCACA+AGG | - | chr2_4:30857516-30857535 | None:intergenic | 25.0% |
| ! | GAATGTTTCTTTCAAACAAA+TGG | + | chr2_4:30857754-30857773 | Msa0324890:CDS | 25.0% |
| !!! | TTGTTTTGAATGTCACATTT+TGG | + | chr2_4:30857826-30857845 | Msa0324890:CDS | 25.0% |
| !!! | TTTTGAAACACTTGCAATAT+GGG | - | chr2_4:30857885-30857904 | None:intergenic | 25.0% |
| ! | TACAAGTCGTTATATACATA+TGG | - | chr2_4:30857936-30857955 | None:intergenic | 25.0% |
| ! | AAACAAAATCTTGACGATAT+CGG | - | chr2_4:30858100-30858119 | None:intergenic | 25.0% |
| !!! | ATATCGTCAAGATTTTGTTT+CGG | + | chr2_4:30858100-30858119 | Msa0324890:CDS | 25.0% |
| ! | ATATCATATAGCAGTCATTA+AGG | - | chr2_4:30858307-30858326 | None:intergenic | 25.0% |
| ! | TCATGCAACAATTAAATATG+CGG | + | chr2_4:30858481-30858500 | Msa0324890:intron | 25.0% |
| !! | TAGCAATAATTGCTGTTAAT+TGG | + | chr2_4:30858896-30858915 | Msa0324890:intron | 25.0% |
| ! | AAGACAACTATAAATGTATC+AGG | - | chr2_4:30858925-30858944 | None:intergenic | 25.0% |
| ! | TGATACATTTATAGTTGTCT+TGG | + | chr2_4:30858924-30858943 | Msa0324890:intron | 25.0% |
| ! | CAAAAATAGAATTTCTGTCT+TGG | - | chr2_4:30859209-30859228 | None:intergenic | 25.0% |
| !! | CAAGACAGAAATTCTATTTT+TGG | + | chr2_4:30859207-30859226 | Msa0324890:intron | 25.0% |
| !! | CATTACACTTGTATTTTGTT+TGG | - | chr2_4:30859306-30859325 | None:intergenic | 25.0% |
| ! | AAGTGTAATGAAAAAAAGGA+GGG | + | chr2_4:30859316-30859335 | Msa0324890:intron | 25.0% |
| ! | GGATATTCTACAAAAACAAA+AGG | - | chr2_4:30859773-30859792 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAATATCCCTTT+TGG | + | chr2_4:30859777-30859796 | Msa0324890:intron | 25.0% |
| ! | ACTATGTTCATTTCATCTAT+TGG | + | chr2_4:30860114-30860133 | Msa0324890:three_prime_UTR | 25.0% |
| !!! | TTTTTCAGGTTATGTTTGGT+TGG | + | chr2_4:30854556-30854575 | Msa0324890:intron | 30.0% |
| !! | CAATTTAGTTTGTAAGACGT+AGG | + | chr2_4:30854653-30854672 | Msa0324890:intron | 30.0% |
| CTAACAATGTTGATATTGCT+AGG | + | chr2_4:30854680-30854699 | Msa0324890:intron | 30.0% | |
| ! | TTTTCTGTCTGTAGATAAAG+TGG | - | chr2_4:30854935-30854954 | None:intergenic | 30.0% |
| CAAAAGATTGGAATTGACAT+AGG | + | chr2_4:30855184-30855203 | Msa0324890:intron | 30.0% | |
| ! | TACAATACACGAGTTACTTT+CGG | + | chr2_4:30855453-30855472 | Msa0324890:intron | 30.0% |
| GATTGATGTAATGTGGAATT+AGG | + | chr2_4:30855475-30855494 | Msa0324890:intron | 30.0% | |
| !!! | TCAAGAGTTTTGGATTGAAA+TGG | - | chr2_4:30855549-30855568 | None:intergenic | 30.0% |
| ! | TGCTCTTTTTATACCACATT+GGG | + | chr2_4:30855615-30855634 | Msa0324890:intron | 30.0% |
| CAGTATTCTGACAAAAATCA+AGG | - | chr2_4:30855642-30855661 | None:intergenic | 30.0% | |
| !! | ATATGTGATGGATGAATACA+AGG | - | chr2_4:30855943-30855962 | None:intergenic | 30.0% |
| TGAAGTAACATACTGTGAAA+AGG | + | chr2_4:30856159-30856178 | Msa0324890:CDS | 30.0% | |
| !! | CCAGATTTTCCTTCATTTTT+AGG | - | chr2_4:30856201-30856220 | None:intergenic | 30.0% |
| CCTAAAAATGAAGGAAAATC+TGG | + | chr2_4:30856198-30856217 | Msa0324890:CDS | 30.0% | |
| AAAATGAAGGAAAATCTGGA+AGG | + | chr2_4:30856202-30856221 | Msa0324890:CDS | 30.0% | |
| AAATGAAGGAAAATCTGGAA+GGG | + | chr2_4:30856203-30856222 | Msa0324890:CDS | 30.0% | |
| CTGTAAATTTAACTCCTCTT+CGG | + | chr2_4:30856362-30856381 | Msa0324890:CDS | 30.0% | |
| GATTTAAACAACATTTGGCT+AGG | + | chr2_4:30856494-30856513 | Msa0324890:CDS | 30.0% | |
| TTATCAGACTTTGGATAGAA+AGG | - | chr2_4:30856643-30856662 | None:intergenic | 30.0% | |
| TCATCTTCATTATCAGACTT+TGG | - | chr2_4:30856652-30856671 | None:intergenic | 30.0% | |
| TACTTTGCATCATATGAACA+AGG | + | chr2_4:30856693-30856712 | Msa0324890:CDS | 30.0% | |
| ! | GTTTGAAGATTCTGATTTGT+GGG | - | chr2_4:30856847-30856866 | None:intergenic | 30.0% |
| ! | AGTTTGAAGATTCTGATTTG+TGG | - | chr2_4:30856848-30856867 | None:intergenic | 30.0% |
| TCAAACTTGCAAACAACTAA+AGG | + | chr2_4:30856861-30856880 | Msa0324890:CDS | 30.0% | |
| AAACAACTAAAGGTTAAGAC+AGG | + | chr2_4:30856871-30856890 | Msa0324890:CDS | 30.0% | |
| GTTAATATTTACGATGAAGG+AGG | - | chr2_4:30857367-30857386 | None:intergenic | 30.0% | |
| TTATTACCTACATCAAAAGG+GGG | - | chr2_4:30857422-30857441 | None:intergenic | 30.0% | |
| GTTATTACCTACATCAAAAG+GGG | - | chr2_4:30857423-30857442 | None:intergenic | 30.0% | |
| CAGTTATTACCTACATCAAA+AGG | - | chr2_4:30857425-30857444 | None:intergenic | 30.0% | |
| ATGAAAAGTGAATTTACCCA+TGG | + | chr2_4:30857642-30857661 | Msa0324890:CDS | 30.0% | |
| TGAAAAGTGAATTTACCCAT+GGG | + | chr2_4:30857643-30857662 | Msa0324890:CDS | 30.0% | |
| !!! | CTTTTGAAACACTTGCAATA+TGG | - | chr2_4:30857886-30857905 | None:intergenic | 30.0% |
| CATATTGCAAGTGTTTCAAA+AGG | + | chr2_4:30857884-30857903 | Msa0324890:CDS | 30.0% | |
| ATGTATATAACGACTTGTAC+AGG | + | chr2_4:30857937-30857956 | Msa0324890:CDS | 30.0% | |
| TGTATATAACGACTTGTACA+GGG | + | chr2_4:30857938-30857957 | Msa0324890:CDS | 30.0% | |
| CTTGCAATCAAATCTATTCA+TGG | + | chr2_4:30857966-30857985 | Msa0324890:CDS | 30.0% | |
| ! | TTTTTGTCATCCTCTTTACT+TGG | + | chr2_4:30858049-30858068 | Msa0324890:CDS | 30.0% |
| TCTTGAGCTGAATTATAATG+AGG | - | chr2_4:30858389-30858408 | None:intergenic | 30.0% | |
| ATCTAATGCAGTAATTTACC+TGG | - | chr2_4:30858458-30858477 | None:intergenic | 30.0% | |
| CATTAACTTTCTTCTGTGAT+AGG | - | chr2_4:30858706-30858725 | None:intergenic | 30.0% | |
| ATCAGACCTGATATTAAATC+AGG | + | chr2_4:30859013-30859032 | Msa0324890:intron | 30.0% | |
| GACTATCCTGATTTAATATC+AGG | - | chr2_4:30859022-30859041 | None:intergenic | 30.0% | |
| GTCATCGTTTCAAAGTTTAA+TGG | + | chr2_4:30859039-30859058 | Msa0324890:intron | 30.0% | |
| AAAAATAGAGTCTTGCTAAC+CGG | - | chr2_4:30859259-30859278 | None:intergenic | 30.0% | |
| CAAGTGTAATGAAAAAAAGG+AGG | + | chr2_4:30859315-30859334 | Msa0324890:intron | 30.0% | |
| TTTCTTCTATAAAACTCCTG+AGG | + | chr2_4:30859368-30859387 | Msa0324890:intron | 30.0% | |
| TTCTTCTATAAAACTCCTGA+GGG | + | chr2_4:30859369-30859388 | Msa0324890:intron | 30.0% | |
| CAAGGTAATCAAAACCAAAA+GGG | - | chr2_4:30859445-30859464 | None:intergenic | 30.0% | |
| CTATATTGTACAAAAGTCCA+AGG | - | chr2_4:30859463-30859482 | None:intergenic | 30.0% | |
| TTCAAAAGTCGAACTCAATT+TGG | + | chr2_4:30859530-30859549 | Msa0324890:intron | 30.0% | |
| TTGTTACATGCAACATAAGT+TGG | + | chr2_4:30859634-30859653 | Msa0324890:intron | 30.0% | |
| TGTTACATGCAACATAAGTT+GGG | + | chr2_4:30859635-30859654 | Msa0324890:intron | 30.0% | |
| GATTCAATAGACTATGATGA+TGG | + | chr2_4:30859831-30859850 | Msa0324890:CDS | 30.0% | |
| ! | AAGTTACAAGGTTTTCATTG+TGG | + | chr2_4:30860004-30860023 | Msa0324890:three_prime_UTR | 30.0% |
| GAAAAGCTGGGATATATAAA+AGG | + | chr2_4:30860266-30860285 | Msa0324890:three_prime_UTR | 30.0% | |
| ! | TGAGTTGAGGTTGAATTACT+GGG | - | chr2_4:30854266-30854285 | None:intergenic | 35.0% |
| ACTTTCTTGTTCTCGCAATT+GGG | + | chr2_4:30854462-30854481 | Msa0324890:intron | 35.0% | |
| CAATTGGGAATAGTAGCAAA+AGG | + | chr2_4:30854477-30854496 | Msa0324890:intron | 35.0% | |
| TGTAGGATAGTCATCCAATT+TGG | + | chr2_4:30854794-30854813 | Msa0324890:intron | 35.0% | |
| TTCAGACCTGAATGACTTTA+GGG | - | chr2_4:30854869-30854888 | None:intergenic | 35.0% | |
| TAGGGTGAGAAAACTTAATG+TGG | + | chr2_4:30855027-30855046 | Msa0324890:intron | 35.0% | |
| GGAATTGACATAGGTTATGA+AGG | + | chr2_4:30855193-30855212 | Msa0324890:intron | 35.0% | |
| TATCCCTCAACAAAATCACA+AGG | - | chr2_4:30855335-30855354 | None:intergenic | 35.0% | |
| ACTTTCGGATTGATGTAATG+TGG | + | chr2_4:30855468-30855487 | Msa0324890:intron | 35.0% | |
| ! | TTGTGCAACTATGTTTCTGT+CGG | + | chr2_4:30855575-30855594 | Msa0324890:intron | 35.0% |
| ! | GTGCTCTTTTTATACCACAT+TGG | + | chr2_4:30855614-30855633 | Msa0324890:intron | 35.0% |
| ! | AAGGTATCTTTGTTGCCTAT+TGG | + | chr2_4:30855771-30855790 | Msa0324890:intron | 35.0% |
| TAGCTCTCATTTGGATGTAA+TGG | + | chr2_4:30855985-30856004 | Msa0324890:exon | 35.0% | |
| AAGGTTAGATGCAATTACTG+TGG | + | chr2_4:30856079-30856098 | Msa0324890:CDS | 35.0% | |
| AGGTTAGATGCAATTACTGT+GGG | + | chr2_4:30856080-30856099 | Msa0324890:CDS | 35.0% | |
| ! | ATGTTACTTCACCAGAAACT+CGG | - | chr2_4:30856150-30856169 | None:intergenic | 35.0% |
| !!! | ATTTTTAGGTAGACTTCCTC+CGG | - | chr2_4:30856187-30856206 | None:intergenic | 35.0% |
| GGAAGTCTACCTAAAAATGA+AGG | + | chr2_4:30856189-30856208 | Msa0324890:CDS | 35.0% | |
| AAGCAAAGGAAAGCAATTGA+TGG | + | chr2_4:30856324-30856343 | Msa0324890:CDS | 35.0% | |
| AAAGGAAAGCAATTGATGGA+TGG | + | chr2_4:30856328-30856347 | Msa0324890:CDS | 35.0% | |
| TACTGTGAGAAAGTTGTTAG+TGG | + | chr2_4:30856460-30856479 | Msa0324890:CDS | 35.0% | |
| AGGAGATACTGTAAAGATAC+AGG | + | chr2_4:30856736-30856755 | Msa0324890:CDS | 35.0% | |
| AGATACAGGAAAGACCTTTA+AGG | + | chr2_4:30856750-30856769 | Msa0324890:CDS | 35.0% | |
| GATACAGGAAAGACCTTTAA+GGG | + | chr2_4:30856751-30856770 | Msa0324890:CDS | 35.0% | |
| ATTAGAGGACATTCCCTTAA+AGG | - | chr2_4:30856767-30856786 | None:intergenic | 35.0% | |
| TCCTTGCGTAATTTCTTAGT+GGG | - | chr2_4:30856898-30856917 | None:intergenic | 35.0% | |
| TTCCTTGCGTAATTTCTTAG+TGG | - | chr2_4:30856899-30856918 | None:intergenic | 35.0% | |
| ! | AATCACTGGTTGTTCGATAA+TGG | + | chr2_4:30857128-30857147 | Msa0324890:CDS | 35.0% |
| ! | TTTCTTGTTTCATCTCCTCA+TGG | + | chr2_4:30857192-30857211 | Msa0324890:CDS | 35.0% |
| GAAACAAAGTATACACCATG+AGG | - | chr2_4:30857210-30857229 | None:intergenic | 35.0% | |
| TGCATCTTCAACTACATTAG+TGG | - | chr2_4:30857244-30857263 | None:intergenic | 35.0% | |
| ! | TAAGCTTTTGGACAAAGTAG+TGG | + | chr2_4:30857275-30857294 | Msa0324890:CDS | 35.0% |
| ! | GACAAAGTAGTGGAAGAAAT+AGG | + | chr2_4:30857285-30857304 | Msa0324890:CDS | 35.0% |
| AAATGCTTGAAGAAAGGAGA+AGG | + | chr2_4:30857475-30857494 | Msa0324890:CDS | 35.0% | |
| ! | AAAGGAGAAGGAATTTGTTC+TGG | + | chr2_4:30857487-30857506 | Msa0324890:CDS | 35.0% |
| TGCTACATTGCAGAATTTGT+TGG | + | chr2_4:30857710-30857729 | Msa0324890:CDS | 35.0% | |
| GTCTGAATGAATGCATTGTT+CGG | + | chr2_4:30858230-30858249 | Msa0324890:CDS | 35.0% | |
| AATTCAGCTCAAGATGACTT+TGG | + | chr2_4:30858395-30858414 | Msa0324890:CDS | 35.0% | |
| !! | AGATGACTTTGGAACTGAAT+TGG | + | chr2_4:30858406-30858425 | Msa0324890:CDS | 35.0% |
| TGCAACAATTAAATATGCGG+AGG | + | chr2_4:30858484-30858503 | Msa0324890:intron | 35.0% | |
| ACAACATGGAATAAGTTGCT+TGG | + | chr2_4:30858574-30858593 | Msa0324890:CDS | 35.0% | |
| TGTCTGACTTAATATGCGAA+CGG | - | chr2_4:30858615-30858634 | None:intergenic | 35.0% | |
| GAGAATGCCAAGTAAGAAAA+AGG | + | chr2_4:30858759-30858778 | Msa0324890:CDS | 35.0% | |
| CCAAGTAAGAAAAAGGTCTA+GGG | + | chr2_4:30858766-30858785 | Msa0324890:CDS | 35.0% | |
| AAAGTTTAATGGTCTGACCA+GGG | + | chr2_4:30859050-30859069 | Msa0324890:intron | 35.0% | |
| CCAAGGTAATCAAAACCAAA+AGG | - | chr2_4:30859446-30859465 | None:intergenic | 35.0% | |
| !!! | CCTTTTGGTTTTGATTACCT+TGG | + | chr2_4:30859443-30859462 | Msa0324890:intron | 35.0% |
| CAATCAGATATCCACATTGT+TGG | - | chr2_4:30859744-30859763 | None:intergenic | 35.0% | |
| CATCTAGATCAACACCAAAA+GGG | - | chr2_4:30859794-30859813 | None:intergenic | 35.0% | |
| TCATCTAGATCAACACCAAA+AGG | - | chr2_4:30859795-30859814 | None:intergenic | 35.0% | |
| !! | ACTATGATGATGGATCTGAA+AGG | + | chr2_4:30859841-30859860 | Msa0324890:CDS | 35.0% |
| GAGTGAGTAATCAAGTTACA+AGG | + | chr2_4:30859992-30860011 | Msa0324890:exon | 35.0% | |
| ! | TTACAAGGTTTTCATTGTGG+AGG | + | chr2_4:30860007-30860026 | Msa0324890:three_prime_UTR | 35.0% |
| ! | GTTTTCATTGTGGAGGAATA+AGG | + | chr2_4:30860014-30860033 | Msa0324890:three_prime_UTR | 35.0% |
| ATTGTGGAGGAATAAGGATT+TGG | + | chr2_4:30860020-30860039 | Msa0324890:three_prime_UTR | 35.0% | |
| TTCCCTGTGAAAAATCAAGA+TGG | + | chr2_4:30860071-30860090 | Msa0324890:three_prime_UTR | 35.0% | |
| ! | GACCATCTTGATTTTTCACA+GGG | - | chr2_4:30860076-30860095 | None:intergenic | 35.0% |
| AAAATCAAGATGGTCGTCAT+CGG | + | chr2_4:30860081-30860100 | Msa0324890:three_prime_UTR | 35.0% | |
| TCATTTCATCTATTGGAGCA+TGG | + | chr2_4:30860121-30860140 | Msa0324890:three_prime_UTR | 35.0% | |
| AGATTTAGCTGTGTTTGTCA+TGG | + | chr2_4:30860240-30860259 | Msa0324890:three_prime_UTR | 35.0% | |
| TTTGTCATGGAAAGAAAAGC+TGG | + | chr2_4:30860253-30860272 | Msa0324890:three_prime_UTR | 35.0% | |
| TTGTCATGGAAAGAAAAGCT+GGG | + | chr2_4:30860254-30860273 | Msa0324890:three_prime_UTR | 35.0% | |
| ! | GTGAGTTGAGGTTGAATTAC+TGG | - | chr2_4:30854267-30854286 | None:intergenic | 40.0% |
| GTTGTTGACGAAAATCGGTT+AGG | - | chr2_4:30854294-30854313 | None:intergenic | 40.0% | |
| GTTCGGTTGTTGACGAAAAT+CGG | - | chr2_4:30854299-30854318 | None:intergenic | 40.0% | |
| TAGAGAACAACCTCAACGTA+CGG | - | chr2_4:30854419-30854438 | None:intergenic | 40.0% | |
| GACTTTCTTGTTCTCGCAAT+TGG | + | chr2_4:30854461-30854480 | Msa0324890:intron | 40.0% | |
| !! | GGTTGATTTGGATTGGTCTT+TGG | - | chr2_4:30854748-30854767 | None:intergenic | 40.0% |
| TCAGACCTGAATGACTTTAG+GGG | - | chr2_4:30854868-30854887 | None:intergenic | 40.0% | |
| GTTCAGACCTGAATGACTTT+AGG | - | chr2_4:30854870-30854889 | None:intergenic | 40.0% | |
| TTAGCATGGTAAGAGACGTA+GGG | + | chr2_4:30855009-30855028 | Msa0324890:intron | 40.0% | |
| TTAAGCCATGACTCACCTAA+TGG | + | chr2_4:30855053-30855072 | Msa0324890:intron | 40.0% | |
| ! | TCCTCCTTGTGATTTTGTTG+AGG | + | chr2_4:30855328-30855347 | Msa0324890:intron | 40.0% |
| ! | CCTCCTTGTGATTTTGTTGA+GGG | + | chr2_4:30855329-30855348 | Msa0324890:intron | 40.0% |
| AGTCCCAACTTGGCATTTAT+AGG | + | chr2_4:30855523-30855542 | Msa0324890:intron | 40.0% | |
| TGGCCTATAAATGCCAAGTT+GGG | - | chr2_4:30855529-30855548 | None:intergenic | 40.0% | |
| ATGGCCTATAAATGCCAAGT+TGG | - | chr2_4:30855530-30855549 | None:intergenic | 40.0% | |
| GTTTGTGATGTATACGCTAC+TGG | + | chr2_4:30855855-30855874 | Msa0324890:intron | 40.0% | |
| ATGTATACGCTACTGGAACT+GGG | + | chr2_4:30855862-30855881 | Msa0324890:intron | 40.0% | |
| ! | TCCATCACATATGCTTTTGC+AGG | + | chr2_4:30855951-30855970 | Msa0324890:intron | 40.0% |
| ! | ACCTGCAAAAGCATATGTGA+TGG | - | chr2_4:30855955-30855974 | None:intergenic | 40.0% |
| GAATTGCGATAGCTCTCATT+TGG | + | chr2_4:30855976-30855995 | Msa0324890:five_prime_UTR | 40.0% | |
| !! | AGGATTTGTTGATCCTGGTT+GGG | + | chr2_4:30856024-30856043 | Msa0324890:CDS | 40.0% |
| TCAAGATGAGCGGAAAAAGA+AGG | + | chr2_4:30856060-30856079 | Msa0324890:CDS | 40.0% | |
| TACTGTGGGAAAGTTGTTAG+TGG | + | chr2_4:30856094-30856113 | Msa0324890:CDS | 40.0% | |
| ! | TGTTACTTCACCAGAAACTC+GGG | - | chr2_4:30856149-30856168 | None:intergenic | 40.0% |
| AACATACTGTGAAAAGGCTC+CGG | + | chr2_4:30856165-30856184 | Msa0324890:CDS | 40.0% | |
| AAGACGATGAAGAGCAAGTT+GGG | + | chr2_4:30856296-30856315 | Msa0324890:CDS | 40.0% | |
| TGTGAGAAAGTTGTTAGTGG+CGG | + | chr2_4:30856463-30856482 | Msa0324890:CDS | 40.0% | |
| ACAACATTTGGCTAGGATTC+CGG | + | chr2_4:30856501-30856520 | Msa0324890:CDS | 40.0% | |
| !!! | TCTTCTGGAGCACTTTTACA+AGG | - | chr2_4:30856538-30856557 | None:intergenic | 40.0% |
| AATATGAAATGGCATCGCAC+TGG | + | chr2_4:30856580-30856599 | Msa0324890:CDS | 40.0% | |
| ATCGCACTGGAAAAAGACAT+AGG | + | chr2_4:30856593-30856612 | Msa0324890:CDS | 40.0% | |
| AATCTTGATCTTCTCAACGC+TGG | - | chr2_4:30856802-30856821 | None:intergenic | 40.0% | |
| ACCCACTAAGAAATTACGCA+AGG | + | chr2_4:30856894-30856913 | Msa0324890:CDS | 40.0% | |
| CATAAAATGCTGGAATTGGC+TGG | + | chr2_4:30856991-30857010 | Msa0324890:CDS | 40.0% | |
| AAAAGCGACCCGAAATAAGT+TGG | - | chr2_4:30857050-30857069 | None:intergenic | 40.0% | |
| TTGCTGAATATAAGGCTTCC+TGG | + | chr2_4:30857103-30857122 | Msa0324890:CDS | 40.0% | |
| TGCTGAATATAAGGCTTCCT+GGG | + | chr2_4:30857104-30857123 | Msa0324890:CDS | 40.0% | |
| ! | GTTCGATAATGGCTGATAGT+TGG | + | chr2_4:30857139-30857158 | Msa0324890:CDS | 40.0% |
| AGGTGAAGAAAATGTAGTGC+AGG | + | chr2_4:30857305-30857324 | Msa0324890:CDS | 40.0% | |
| CTACATCAAAAGGGGGAATT+AGG | - | chr2_4:30857415-30857434 | None:intergenic | 40.0% | |
| ! | CTAATTCCCCCTTTTGATGT+AGG | + | chr2_4:30857413-30857432 | Msa0324890:intron | 40.0% |
| ACTCCTAACTATAAAGCTGC+TGG | + | chr2_4:30857450-30857469 | Msa0324890:CDS | 40.0% | |
| CTCCTAACTATAAAGCTGCT+GGG | + | chr2_4:30857451-30857470 | Msa0324890:CDS | 40.0% | |
| ! | TTCCCAGCAGCTTTATAGTT+AGG | - | chr2_4:30857456-30857475 | None:intergenic | 40.0% |
| CTGGGAAAATGCTTGAAGAA+AGG | + | chr2_4:30857469-30857488 | Msa0324890:CDS | 40.0% | |
| ! | TAGATGTGTAGAAGAGTGCA+TGG | + | chr2_4:30857563-30857582 | Msa0324890:CDS | 40.0% |
| ! | TGTAGAAGAGTGCATGGAAA+AGG | + | chr2_4:30857569-30857588 | Msa0324890:CDS | 40.0% |
| ! | GTAGAAGAGTGCATGGAAAA+GGG | + | chr2_4:30857570-30857589 | Msa0324890:CDS | 40.0% |
| ! | CTTTAGAAGCTCATTCCCAT+GGG | - | chr2_4:30857661-30857680 | None:intergenic | 40.0% |
| CAAACAAATGGATGTCATCC+AGG | + | chr2_4:30857766-30857785 | Msa0324890:CDS | 40.0% | |
| GGAAGAAAATGCAGTATGTG+AGG | + | chr2_4:30857847-30857866 | Msa0324890:CDS | 40.0% | |
| !! | GTGTTTCAAAAGGTGTCTAG+TGG | + | chr2_4:30857894-30857913 | Msa0324890:CDS | 40.0% |
| GAAATATGAGCCATTCTGGA+AGG | + | chr2_4:30858001-30858020 | Msa0324890:CDS | 40.0% | |
| AAGTAAGCAGCCAAGTAAAG+AGG | - | chr2_4:30858062-30858081 | None:intergenic | 40.0% | |
| TCTTGACGATATCGGTATGA+CGG | - | chr2_4:30858092-30858111 | None:intergenic | 40.0% | |
| TAGCATTCTGATGTAGTACG+TGG | + | chr2_4:30858208-30858227 | Msa0324890:intron | 40.0% | |
| TTGGCAATTAGCACAAGAAC+AGG | + | chr2_4:30858425-30858444 | Msa0324890:CDS | 40.0% | |
| AGCAGCTAGTGAGGTAAAAA+GGG | - | chr2_4:30858546-30858565 | None:intergenic | 40.0% | |
| AAGCAGCTAGTGAGGTAAAA+AGG | - | chr2_4:30858547-30858566 | None:intergenic | 40.0% | |
| ! | TTTTTACCTCACTAGCTGCT+TGG | + | chr2_4:30858546-30858565 | Msa0324890:intron | 40.0% |
| ! | TCTTTTGCATGTGAGCATGA+TGG | + | chr2_4:30858641-30858660 | Msa0324890:CDS | 40.0% |
| ! | CTTTTGCATGTGAGCATGAT+GGG | + | chr2_4:30858642-30858661 | Msa0324890:CDS | 40.0% |
| GCCAAGTAAGAAAAAGGTCT+AGG | + | chr2_4:30858765-30858784 | Msa0324890:CDS | 40.0% | |
| ! | CCCTAGACCTTTTTCTTACT+TGG | - | chr2_4:30858769-30858788 | None:intergenic | 40.0% |
| TTGTAGAACATTCTCAGCAG+AGG | - | chr2_4:30858804-30858823 | None:intergenic | 40.0% | |
| CAAAGTTTAATGGTCTGACC+AGG | + | chr2_4:30859049-30859068 | Msa0324890:intron | 40.0% | |
| !! | AATTATTACCGGTTCAACCC+TGG | - | chr2_4:30859070-30859089 | None:intergenic | 40.0% |
| !! | TGGATCTGAAAGGCATCTAA+AGG | + | chr2_4:30859851-30859870 | Msa0324890:CDS | 40.0% |
| !! | GGATCTGAAAGGCATCTAAA+GGG | + | chr2_4:30859852-30859871 | Msa0324890:CDS | 40.0% |
| GCAGATCATGCTAACATTGA+TGG | + | chr2_4:30859924-30859943 | Msa0324890:CDS | 40.0% | |
| ! | CGACCATCTTGATTTTTCAC+AGG | - | chr2_4:30860077-30860096 | None:intergenic | 40.0% |
| TTTCATCTATTGGAGCATGG+TGG | + | chr2_4:30860124-30860143 | Msa0324890:three_prime_UTR | 40.0% | |
| GATCCAGATCGAAGTGGAAT+CGG | - | chr2_4:30854391-30854410 | None:intergenic | 45.0% | |
| GAAGAAGATCCAGATCGAAG+TGG | - | chr2_4:30854397-30854416 | None:intergenic | 45.0% | |
| !! | ACATGCGGGTTGATTTGGAT+TGG | - | chr2_4:30854755-30854774 | None:intergenic | 45.0% |
| TCCAAATCAACCCGCATGTT+TGG | + | chr2_4:30854756-30854775 | Msa0324890:intron | 45.0% | |
| !! | TCCAAACATGCGGGTTGATT+TGG | - | chr2_4:30854760-30854779 | None:intergenic | 45.0% |
| ATCAACCCGCATGTTTGGAT+CGG | + | chr2_4:30854761-30854780 | Msa0324890:intron | 45.0% | |
| ! | GGATCGGATCGGATTTTTGT+AGG | + | chr2_4:30854777-30854796 | Msa0324890:intron | 45.0% |
| !! | TGCGGTTTGGATCAGTTTTG+AGG | - | chr2_4:30854836-30854855 | None:intergenic | 45.0% |
| GAACACCCCTAAAGTCATTC+AGG | + | chr2_4:30854860-30854879 | Msa0324890:intron | 45.0% | |
| CTACGTCTCTTACCATGCTA+AGG | - | chr2_4:30855010-30855029 | None:intergenic | 45.0% | |
| CTTAGCATGGTAAGAGACGT+AGG | + | chr2_4:30855008-30855027 | Msa0324890:intron | 45.0% | |
| !!! | ACCTAATGGACTGGCCTTTT+TGG | + | chr2_4:30855067-30855086 | Msa0324890:intron | 45.0% |
| ACCAAAAAGGCCAGTCCATT+AGG | - | chr2_4:30855071-30855090 | None:intergenic | 45.0% | |
| !!! | AATGGACTGGCCTTTTTGGT+TGG | + | chr2_4:30855071-30855090 | Msa0324890:intron | 45.0% |
| !!! | ATGGACTGGCCTTTTTGGTT+GGG | + | chr2_4:30855072-30855091 | Msa0324890:intron | 45.0% |
| CCCTCAACAAAATCACAAGG+AGG | - | chr2_4:30855332-30855351 | None:intergenic | 45.0% | |
| !! | TTGCTCAAGTTGGGTTTCCT+TGG | + | chr2_4:30855388-30855407 | Msa0324890:intron | 45.0% |
| !! | TGTCGGTTGCTGTTTCTTGA+TGG | + | chr2_4:30855592-30855611 | Msa0324890:intron | 45.0% |
| CAAAAATCAAGGGCCCAATG+TGG | - | chr2_4:30855631-30855650 | None:intergenic | 45.0% | |
| ! | AGCAAAGGAAGCATGCCAAT+AGG | - | chr2_4:30855789-30855808 | None:intergenic | 45.0% |
| GATGTATACGCTACTGGAAC+TGG | + | chr2_4:30855861-30855880 | Msa0324890:intron | 45.0% | |
| TGTATACGCTACTGGAACTG+GGG | + | chr2_4:30855863-30855882 | Msa0324890:intron | 45.0% | |
| ACAAATCCTGTGGAGCGTAT+TGG | - | chr2_4:30856013-30856032 | None:intergenic | 45.0% | |
| !! | TCCACAGGATTTGTTGATCC+TGG | + | chr2_4:30856019-30856038 | Msa0324890:CDS | 45.0% |
| ACCAGGATCAACAAATCCTG+TGG | - | chr2_4:30856023-30856042 | None:intergenic | 45.0% | |
| !! | CAGGATTTGTTGATCCTGGT+TGG | + | chr2_4:30856023-30856042 | Msa0324890:CDS | 45.0% |
| ATGGCATTGCTCAAGATGAG+CGG | + | chr2_4:30856050-30856069 | Msa0324890:CDS | 45.0% | |
| TGTGGGAAAGTTGTTAGTGG+TGG | + | chr2_4:30856097-30856116 | Msa0324890:CDS | 45.0% | |
| GTGGGAAAGTTGTTAGTGGT+GGG | + | chr2_4:30856098-30856117 | Msa0324890:CDS | 45.0% | |
| GAAGACGATGAAGAGCAAGT+TGG | + | chr2_4:30856295-30856314 | Msa0324890:CDS | 45.0% | |
| ! | CAAGTTGGGTGTAGAAGCAA+AGG | + | chr2_4:30856310-30856329 | Msa0324890:CDS | 45.0% |
| ! | GAAAGCAATTGATGGATGGC+AGG | + | chr2_4:30856332-30856351 | Msa0324890:CDS | 45.0% |
| TTAACTCCTCTTCGGTCCTT+AGG | + | chr2_4:30856370-30856389 | Msa0324890:CDS | 45.0% | |
| ACATATCCTAAGGACCGAAG+AGG | - | chr2_4:30856379-30856398 | None:intergenic | 45.0% | |
| TCCTTAGGATATGTTGACCC+AGG | + | chr2_4:30856385-30856404 | Msa0324890:CDS | 45.0% | |
| CCTTAGGATATGTTGACCCA+GGG | + | chr2_4:30856386-30856405 | Msa0324890:CDS | 45.0% | |
| CAACATTTGGCTAGGATTCC+GGG | + | chr2_4:30856502-30856521 | Msa0324890:CDS | 45.0% | |
| AAAAAGACATAGGCAACCCG+AGG | + | chr2_4:30856603-30856622 | Msa0324890:CDS | 45.0% | |
| AAAAGACATAGGCAACCCGA+GGG | + | chr2_4:30856604-30856623 | Msa0324890:CDS | 45.0% | |
| !! | TGGTTCTGGGCTAGTATTAG+AGG | - | chr2_4:30856782-30856801 | None:intergenic | 45.0% |
| !! | ATCTTCTCAACGCTGGTTCT+GGG | - | chr2_4:30856795-30856814 | None:intergenic | 45.0% |
| CTTGTAAAGGAATTCCTGCG+TGG | - | chr2_4:30856951-30856970 | None:intergenic | 45.0% | |
| ! | CTGGAATTGGCTGGTCAATA+TGG | + | chr2_4:30857000-30857019 | Msa0324890:CDS | 45.0% |
| ! | TTGGCTGGTCAATATGGACA+AGG | + | chr2_4:30857006-30857025 | Msa0324890:CDS | 45.0% |
| TGGTCAATATGGACAAGGAC+TGG | + | chr2_4:30857011-30857030 | Msa0324890:CDS | 45.0% | |
| ! | CCGAAATAAGTTGGCTGGAT+GGG | - | chr2_4:30857041-30857060 | None:intergenic | 45.0% |
| CCCATCCAGCCAACTTATTT+CGG | + | chr2_4:30857038-30857057 | Msa0324890:CDS | 45.0% | |
| CCATCCAGCCAACTTATTTC+GGG | + | chr2_4:30857039-30857058 | Msa0324890:CDS | 45.0% | |
| !!! | TATTTCGGGTCGCTTTTTGC+AGG | + | chr2_4:30857053-30857072 | Msa0324890:CDS | 45.0% |
| TGATAGTTGGAGAGATGCAC+AGG | + | chr2_4:30857152-30857171 | Msa0324890:CDS | 45.0% | |
| GATAGTTGGAGAGATGCACA+GGG | + | chr2_4:30857153-30857172 | Msa0324890:CDS | 45.0% | |
| !! | GCTTTAGAAGCTCATTCCCA+TGG | - | chr2_4:30857662-30857681 | None:intergenic | 45.0% |
| !! | AATGAGCTTCTAAAGCCAGC+TGG | + | chr2_4:30857666-30857685 | Msa0324890:CDS | 45.0% |
| ! | AGCAAAGCTAGAAGCACACT+GGG | - | chr2_4:30857694-30857713 | None:intergenic | 45.0% |
| ! | TAGCAAAGCTAGAAGCACAC+TGG | - | chr2_4:30857695-30857714 | None:intergenic | 45.0% |
| !!! | TTTTTTGCACCTCTTTCCCC+TGG | - | chr2_4:30857806-30857825 | None:intergenic | 45.0% |
| CTATTCATGGCGATGATGCA+CGG | + | chr2_4:30857979-30857998 | Msa0324890:CDS | 45.0% | |
| CACGGAAATATGAGCCATTC+TGG | + | chr2_4:30857997-30858016 | Msa0324890:CDS | 45.0% | |
| CTGTCTATCACCTTCCAGAA+TGG | - | chr2_4:30858014-30858033 | None:intergenic | 45.0% | |
| ! | CATTCTGGAAGGTGATAGAC+AGG | + | chr2_4:30858012-30858031 | Msa0324890:CDS | 45.0% |
| ACAAGAACAGGTCTTGAACC+AGG | + | chr2_4:30858437-30858456 | Msa0324890:CDS | 45.0% | |
| !! | AAGAGCACTTACTTGCTGAC+TGG | + | chr2_4:30858822-30858841 | Msa0324890:CDS | 45.0% |
| ! | ACAAAGCTCTGATGGTGACA+AGG | + | chr2_4:30858862-30858881 | Msa0324890:CDS | 45.0% |
| AGGAGAATGCTAAACAGTCC+AGG | + | chr2_4:30859100-30859119 | Msa0324890:intron | 45.0% | |
| GGAGAATGCTAAACAGTCCA+GGG | + | chr2_4:30859101-30859120 | Msa0324890:intron | 45.0% | |
| GAGAATGCTAAACAGTCCAG+GGG | + | chr2_4:30859102-30859121 | Msa0324890:intron | 45.0% | |
| TTCGAGACTGGAAACAGATC+CGG | + | chr2_4:30859394-30859413 | Msa0324890:intron | 45.0% | |
| AAGGGCCAGTTTGACAAGTT+GGG | - | chr2_4:30859427-30859446 | None:intergenic | 45.0% | |
| AAAGGGCCAGTTTGACAAGT+TGG | - | chr2_4:30859428-30859447 | None:intergenic | 45.0% | |
| ! | ACTTGTCAAACTGGCCCTTT+TGG | + | chr2_4:30859428-30859447 | Msa0324890:intron | 45.0% |
| CTTCGCTGCTGACAAACATA+TGG | - | chr2_4:30859719-30859738 | None:intergenic | 45.0% | |
| TTCCCATGAGCTGGTTACTA+TGG | + | chr2_4:30859875-30859894 | Msa0324890:CDS | 45.0% | |
| AGCCATAGTAACCAGCTCAT+GGG | - | chr2_4:30859880-30859899 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGTTGCCAGTTG+TGG | + | chr2_4:30860033-30860052 | Msa0324890:three_prime_UTR | 45.0% |
| ! | AGGATTTGGTTGCCAGTTGT+GGG | + | chr2_4:30860034-30860053 | Msa0324890:three_prime_UTR | 45.0% |
| CAATAATACAGGCCCACAAC+TGG | - | chr2_4:30860049-30860068 | None:intergenic | 45.0% | |
| CAGTTGTGGGCCTGTATTAT+TGG | + | chr2_4:30860047-30860066 | Msa0324890:three_prime_UTR | 45.0% | |
| CACAGGGAAGCCAATAATAC+AGG | - | chr2_4:30860060-30860079 | None:intergenic | 45.0% | |
| !!! | TATATATGTTTTATAAATAA+AGG | + | chr2_4:30858982-30859001 | Msa0324890:intron | 5.0% |
| !! | TTATATTATTTAATTATTAC+CGG | - | chr2_4:30859081-30859100 | None:intergenic | 5.0% |
| GAGACCTTCTTAACTCGACC+CGG | - | chr2_4:30854242-30854261 | None:intergenic | 50.0% | |
| CGGTTAGGAATCGTGAGTTG+AGG | - | chr2_4:30854279-30854298 | None:intergenic | 50.0% | |
| GGATCTTCTTCCGTACGTTG+AGG | + | chr2_4:30854406-30854425 | Msa0324890:five_prime_UTR | 50.0% | |
| TCCGATCCGATCCAAACATG+CGG | - | chr2_4:30854770-30854789 | None:intergenic | 50.0% | |
| ACTCACACGCACAACTGTGA+GGG | - | chr2_4:30854897-30854916 | None:intergenic | 50.0% | |
| AACTCACACGCACAACTGTG+AGG | - | chr2_4:30854898-30854917 | None:intergenic | 50.0% | |
| CCAGTCCATTAGGTGAGTCA+TGG | - | chr2_4:30855061-30855080 | None:intergenic | 50.0% | |
| ! | CCATGACTCACCTAATGGAC+TGG | + | chr2_4:30855058-30855077 | Msa0324890:intron | 50.0% |
| TGAAGCAGATGCTGCGCTAA+TGG | + | chr2_4:30855232-30855251 | Msa0324890:intron | 50.0% | |
| GAAGCAGATGCTGCGCTAAT+GGG | + | chr2_4:30855233-30855252 | Msa0324890:intron | 50.0% | |
| TCTCGATGCTAGTCCCAACT+TGG | + | chr2_4:30855513-30855532 | Msa0324890:intron | 50.0% | |
| GTTGATCCTGGTTGGGATCA+TGG | + | chr2_4:30856031-30856050 | Msa0324890:CDS | 50.0% | |
| CAGCATTTAGCCCGAGTTTC+TGG | + | chr2_4:30856136-30856155 | Msa0324890:CDS | 50.0% | |
| ATACTGTGAAAAGGCTCCGG+AGG | + | chr2_4:30856168-30856187 | Msa0324890:CDS | 50.0% | |
| CCCTGGGTCAACATATCCTA+AGG | - | chr2_4:30856389-30856408 | None:intergenic | 50.0% | |
| TAGGATATGTTGACCCAGGG+TGG | + | chr2_4:30856389-30856408 | Msa0324890:CDS | 50.0% | |
| AGGATATGTTGACCCAGGGT+GGG | + | chr2_4:30856390-30856409 | Msa0324890:CDS | 50.0% | |
| ! | TTACAAGGTGCTACCTCTCC+CGG | - | chr2_4:30856523-30856542 | None:intergenic | 50.0% |
| AGGCATCAGATCCTTACCCT+CGG | - | chr2_4:30856623-30856642 | None:intergenic | 50.0% | |
| AGATGACGAGTATGAGCAGC+AGG | + | chr2_4:30856666-30856685 | Msa0324890:CDS | 50.0% | |
| !! | GATCTTCTCAACGCTGGTTC+TGG | - | chr2_4:30856796-30856815 | None:intergenic | 50.0% |
| ! | TGCAAGTTCTTTTGCCACGC+AGG | + | chr2_4:30856934-30856953 | Msa0324890:CDS | 50.0% |
| ACGGAGTCTGCAGCTTGTAA+AGG | - | chr2_4:30856964-30856983 | None:intergenic | 50.0% | |
| ! | CCCGAAATAAGTTGGCTGGA+TGG | - | chr2_4:30857042-30857061 | None:intergenic | 50.0% |
| AGGTTCTCCAGTTCAAGCCA+GGG | + | chr2_4:30857786-30857805 | Msa0324890:CDS | 50.0% | |
| TTACCTCACTAGCTGCTTGG+TGG | + | chr2_4:30858549-30858568 | Msa0324890:intron | 50.0% | |
| ! | ACCACTGCACAAAGCTCTGA+TGG | + | chr2_4:30858854-30858873 | Msa0324890:CDS | 50.0% |
| ! | ACCATCAGAGCTTTGTGCAG+TGG | - | chr2_4:30858858-30858877 | None:intergenic | 50.0% |
| CTGGAAACAGATCCGGTTTC+CGG | + | chr2_4:30859401-30859420 | Msa0324890:intron | 50.0% | |
| TCTAAAGGGTTCCCATGAGC+TGG | + | chr2_4:30859866-30859885 | Msa0324890:CDS | 50.0% | |
| CAGCCATAGTAACCAGCTCA+TGG | - | chr2_4:30859881-30859900 | None:intergenic | 50.0% | |
| GAGCTGGTTACTATGGCTGA+TGG | + | chr2_4:30859882-30859901 | Msa0324890:CDS | 50.0% | |
| ACTATGGCTGATGGAGCAGT+AGG | + | chr2_4:30859891-30859910 | Msa0324890:CDS | 50.0% | |
| TTCAGGCGGTGGAAGATCGA+CGG | - | chr2_4:30854332-30854351 | None:intergenic | 55.0% | |
| GGTGGAGGTAGAGTTTCAGG+CGG | - | chr2_4:30854346-30854365 | None:intergenic | 55.0% | |
| GGTGGAGGTAGAGTTTCAGG+CGG | - | chr2_4:30854346-30854365 | None:intergenic | 55.0% | |
| CCAGATCGAAGTGGAATCGG+CGG | - | chr2_4:30854388-30854407 | None:intergenic | 55.0% | |
| CCGATCCGATCCAAACATGC+GGG | - | chr2_4:30854769-30854788 | None:intergenic | 55.0% | |
| CCCGCATGTTTGGATCGGAT+CGG | + | chr2_4:30854766-30854785 | Msa0324890:intron | 55.0% | |
| !! | CTTTAGGGGTGTTCGCAGTG+CGG | - | chr2_4:30854854-30854873 | None:intergenic | 55.0% |
| !!! | GGCCTTTTTGGTTGGGCTCT+CGG | + | chr2_4:30855079-30855098 | Msa0324890:intron | 55.0% |
| AGCCGAGAGCCCAACCAAAA+AGG | - | chr2_4:30855084-30855103 | None:intergenic | 55.0% | |
| ATACGCTACTGGAACTGGGG+AGG | + | chr2_4:30855866-30855885 | Msa0324890:intron | 55.0% | |
| ACTGGAACTGGGGAGGTTCT+CGG | + | chr2_4:30855873-30855892 | Msa0324890:intron | 55.0% | |
| ATGGCTCCAATACGCTCCAC+AGG | + | chr2_4:30856004-30856023 | Msa0324890:CDS | 55.0% | |
| GCAATGCCATGATCCCAACC+AGG | - | chr2_4:30856040-30856059 | None:intergenic | 55.0% | |
| TTTGGCTAGGATTCCGGGAG+AGG | + | chr2_4:30856507-30856526 | Msa0324890:CDS | 55.0% | |
| ACATAGGCAACCCGAGGGTA+AGG | + | chr2_4:30856609-30856628 | Msa0324890:CDS | 55.0% | |
| GGCATCAGATCCTTACCCTC+GGG | - | chr2_4:30856622-30856641 | None:intergenic | 55.0% | |
| ! | GCGACCCGAAATAAGTTGGC+TGG | - | chr2_4:30857046-30857065 | None:intergenic | 55.0% |
| !!! | TTCGGGTCGCTTTTTGCAGG+AGG | + | chr2_4:30857056-30857075 | Msa0324890:CDS | 55.0% |
| AAGGCTTCCTGGGCAATCAC+TGG | + | chr2_4:30857114-30857133 | Msa0324890:CDS | 55.0% | |
| CGAACAACCAGTGATTGCCC+AGG | - | chr2_4:30857124-30857143 | None:intergenic | 55.0% | |
| GTTGGAGAGATGCACAGGGT+AGG | + | chr2_4:30857157-30857176 | Msa0324890:CDS | 55.0% | |
| ! | CTGGCTTGAACTGGAGAACC+TGG | - | chr2_4:30857787-30857806 | None:intergenic | 55.0% |
| CAGGTTCTCCAGTTCAAGCC+AGG | + | chr2_4:30857785-30857804 | Msa0324890:CDS | 55.0% | |
| GGTTCTCCAGTTCAAGCCAG+GGG | + | chr2_4:30857787-30857806 | Msa0324890:CDS | 55.0% | |
| ! | CTCTTTCCCCTGGCTTGAAC+TGG | - | chr2_4:30857796-30857815 | None:intergenic | 55.0% |
| CAGTTCAAGCCAGGGGAAAG+AGG | + | chr2_4:30857794-30857813 | Msa0324890:CDS | 55.0% | |
| TTGCCACCAAGCAGCTAGTG+AGG | - | chr2_4:30858555-30858574 | None:intergenic | 55.0% | |
| ! | GCTGCTTGGTGGCAACAACA+TGG | + | chr2_4:30858560-30858579 | Msa0324890:intron | 55.0% |
| TGGTCTGACCAGGGTTGAAC+CGG | + | chr2_4:30859059-30859078 | Msa0324890:intron | 55.0% | |
| ! | GCTAAACAGTCCAGGGGCAT+TGG | + | chr2_4:30859108-30859127 | Msa0324890:intron | 55.0% |
| TGGTGCATAACCAATGCCCC+TGG | - | chr2_4:30859121-30859140 | None:intergenic | 55.0% | |
| TTCCAGTCTCGAAGACCCTC+AGG | - | chr2_4:30859387-30859406 | None:intergenic | 55.0% | |
| ! | TGACAAGTTGGGCCGGAAAC+CGG | - | chr2_4:30859416-30859435 | None:intergenic | 55.0% |
| TCCGGCCCAACTTGTCAAAC+TGG | + | chr2_4:30859419-30859438 | Msa0324890:intron | 55.0% | |
| ! | GCCAGTTTGACAAGTTGGGC+CGG | - | chr2_4:30859423-30859442 | None:intergenic | 55.0% |
| ! | GCAGCGAAGCACCAACAATG+TGG | + | chr2_4:30859730-30859749 | Msa0324890:intron | 55.0% |
| ! | TGGTGCCAGTGACGATGAGT+CGG | + | chr2_4:30859944-30859963 | Msa0324890:CDS | 55.0% |
| CAGATCCGACTCATCGTCAC+TGG | - | chr2_4:30859952-30859971 | None:intergenic | 55.0% | |
| TCGACGGCGGTGGAATCGTT+CGG | - | chr2_4:30854316-30854335 | None:intergenic | 60.0% | |
| GGAGGTAGAGTTTCAGGCGG+TGG | - | chr2_4:30854343-30854362 | None:intergenic | 60.0% | |
| GGCGGTGGAGGTAGAGTTTC+AGG | - | chr2_4:30854349-30854368 | None:intergenic | 60.0% | |
| GGTAGAGTTTCAGGCGGTGG+AGG | - | chr2_4:30854340-30854359 | None:intergenic | 60.0% | |
| GGAGGTAGAGTTTCAGGCGG+TGG | - | chr2_4:30854343-30854362 | None:intergenic | 60.0% | |
| GGCGGTGGAGGTAGAGTTTC+AGG | - | chr2_4:30854349-30854368 | None:intergenic | 60.0% | |
| GATCGAAGTGGAATCGGCGG+TGG | - | chr2_4:30854385-30854404 | None:intergenic | 60.0% | |
| !! | CCGCCGATTCCACTTCGATC+TGG | + | chr2_4:30854385-30854404 | Msa0324890:five_prime_UTR | 60.0% |
| CACGCACAACTGTGAGGGCA+AGG | - | chr2_4:30854892-30854911 | None:intergenic | 60.0% | |
| TGGGCTCTCGGCTCTTCTCA+TGG | + | chr2_4:30855091-30855110 | Msa0324890:intron | 60.0% | |
| GGGCTCTCGGCTCTTCTCAT+GGG | + | chr2_4:30855092-30855111 | Msa0324890:intron | 60.0% | |
| GTTGACCCAGGGTGGGAACA+CGG | + | chr2_4:30856397-30856416 | Msa0324890:CDS | 60.0% | |
| CAACACCGTGTTCCCACCCT+GGG | - | chr2_4:30856405-30856424 | None:intergenic | 60.0% | |
| !! | GTGGGAACACGGTGTTGCTC+AGG | + | chr2_4:30856408-30856427 | Msa0324890:CDS | 60.0% |
| CTCCTGAGGGTCTTCGAGAC+TGG | + | chr2_4:30859382-30859401 | Msa0324890:intron | 60.0% | |
| AGGCGGTGGAAGATCGACGG+CGG | - | chr2_4:30854329-30854348 | None:intergenic | 65.0% | |
| CGAAGTGGAATCGGCGGTGG+AGG | - | chr2_4:30854382-30854401 | None:intergenic | 65.0% | |
| ! | GGGGTGTTCGCAGTGCGGTT+TGG | - | chr2_4:30854849-30854868 | None:intergenic | 65.0% |
| GCAACACCGTGTTCCCACCC+TGG | - | chr2_4:30856406-30856425 | None:intergenic | 65.0% | |
| GAAGCACACTGGGTGCCAGC+TGG | - | chr2_4:30857684-30857703 | None:intergenic | 65.0% | |
| CGGTGGAAGATCGACGGCGG+TGG | - | chr2_4:30854326-30854345 | None:intergenic | 70.0% | |
| CTTGCTAACCGGTGCCCCCG+AGG | - | chr2_4:30859248-30859267 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 30854238 | 30860314 | 30854238 | ID=Msa0324890;Name=Msa0324890 |
| chr2_4 | mRNA | 30854238 | 30860314 | 30854238 | ID=Msa0324890-mRNA-1;Parent=Msa0324890;Name=Msa0324890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=200|1|1|1|0.71|0.62|8|313|902 |
| chr2_4 | exon | 30854238 | 30854348 | 30854238 | ID=Msa0324890-mRNA-1:exon:10311;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30854370 | 30854427 | 30854370 | ID=Msa0324890-mRNA-1:exon:10312;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30855973 | 30857326 | 30855973 | ID=Msa0324890-mRNA-1:exon:10313;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30857435 | 30858121 | 30857435 | ID=Msa0324890-mRNA-1:exon:10314;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30858211 | 30858294 | 30858211 | ID=Msa0324890-mRNA-1:exon:10315;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30858383 | 30858458 | 30858383 | ID=Msa0324890-mRNA-1:exon:10316;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30858561 | 30858883 | 30858561 | ID=Msa0324890-mRNA-1:exon:10317;Parent=Msa0324890-mRNA-1 |
| chr2_4 | exon | 30859786 | 30860314 | 30859786 | ID=Msa0324890-mRNA-1:exon:10318;Parent=Msa0324890-mRNA-1 |
| chr2_4 | five_prime_UTR | 30854238 | 30854348 | 30854238 | ID=Msa0324890-mRNA-1:five_prime_utr;Parent=Msa0324890-mRNA-1 |
| chr2_4 | five_prime_UTR | 30854370 | 30854427 | 30854370 | ID=Msa0324890-mRNA-1:five_prime_utr;Parent=Msa0324890-mRNA-1 |
| chr2_4 | five_prime_UTR | 30855973 | 30856003 | 30855973 | ID=Msa0324890-mRNA-1:five_prime_utr;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30856004 | 30857326 | 30856004 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30857435 | 30858121 | 30857435 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30858211 | 30858294 | 30858211 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30858383 | 30858458 | 30858383 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30858561 | 30858883 | 30858561 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | CDS | 30859786 | 30860001 | 30859786 | ID=Msa0324890-mRNA-1:cds;Parent=Msa0324890-mRNA-1 |
| chr2_4 | three_prime_UTR | 30860002 | 30860314 | 30860002 | ID=Msa0324890-mRNA-1:three_prime_utr;Parent=Msa0324890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
