Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265010 | XP_003597533.2 | 97.264 | 329 | 9 | 0 | 37 | 365 | 1 | 329 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265010 | sp|Q8LDW8|GLO2D_ARATH | 71.084 | 332 | 92 | 3 | 35 | 365 | 1 | 329 | 5.11e-178 | 500 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265010 | G7IS04 | 97.264 | 329 | 9 | 0 | 37 | 365 | 1 | 329 | 0.0 | 672 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa0265010 | 0.806702 | 7.236779e-50 | -8.615850e-47 |
| Msa0095210 | Msa0265010 | 0.808267 | 3.368523e-50 | -8.615850e-47 |
| Msa0172280 | Msa0265010 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0173880 | Msa0265010 | 0.800095 | 1.692363e-48 | -8.615850e-47 |
| Msa0221840 | Msa0265010 | 0.802741 | 4.859264e-49 | -8.615850e-47 |
| Msa0223830 | Msa0265010 | 0.836432 | 9.391654e-57 | -8.615850e-47 |
| Msa0265010 | Msa0268530 | 0.807869 | 4.093578e-50 | -8.615850e-47 |
| Msa0265010 | Msa0268720 | 0.803549 | 3.306582e-49 | -8.615850e-47 |
| Msa0265010 | Msa0484670 | 0.803642 | 3.162680e-49 | -8.615850e-47 |
| Msa0265010 | Msa0582590 | 0.809804 | 1.578867e-50 | -8.615850e-47 |
| Msa0265010 | Msa0582610 | 0.804934 | 1.701669e-49 | -8.615850e-47 |
| Msa0265010 | Msa0582870 | 0.809811 | 1.573049e-50 | -8.615850e-47 |
| Msa0265010 | Msa0660960 | 0.830807 | 2.385070e-55 | -8.615850e-47 |
| Msa0265010 | Msa0924990 | 0.802351 | 5.846653e-49 | -8.615850e-47 |
| Msa0265010 | Msa0931160 | 0.802172 | 6.363060e-49 | -8.615850e-47 |
| Msa0265010 | Msa0983700 | 0.801284 | 9.680996e-49 | -8.615850e-47 |
| Msa0265010 | Msa1084630 | 0.809819 | 1.567127e-50 | -8.615850e-47 |
| Msa0265010 | Msa1086660 | 0.802284 | 6.033879e-49 | -8.615850e-47 |
| Msa0265010 | Msa1086860 | 0.802634 | 5.112426e-49 | -8.615850e-47 |
| Msa0265010 | Msa1091700 | 0.801010 | 1.101628e-48 | -8.615850e-47 |
| Msa0265010 | Msa1355050 | 0.803446 | 3.473495e-49 | -8.615850e-47 |
| Msa0265010 | Msa1394160 | 0.805881 | 1.077676e-49 | -8.615850e-47 |
| Msa0265010 | Msa1394250 | 0.806608 | 7.574010e-50 | -8.615850e-47 |
| Msa0265010 | Msa1400330 | 0.810894 | 9.183982e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265010 | MtrunA17_Chr2g0329571 | 97.264 | 329 | 9 | 0 | 37 | 365 | 1 | 329 | 0.0 | 672 |
| Msa0265010 | MtrunA17_Chr4g0033721 | 76.452 | 310 | 72 | 1 | 56 | 365 | 7 | 315 | 9.38e-177 | 493 |
| Msa0265010 | MtrunA17_Chr5g0428611 | 40.840 | 262 | 141 | 7 | 112 | 365 | 1 | 256 | 2.22e-57 | 187 |
| Msa0265010 | MtrunA17_Chr2g0313641 | 31.818 | 176 | 103 | 7 | 121 | 282 | 56 | 228 | 6.94e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265010 | AT1G06130.2 | 71.299 | 331 | 92 | 2 | 35 | 365 | 1 | 328 | 0.0 | 504 |
| Msa0265010 | AT1G06130.1 | 71.084 | 332 | 92 | 3 | 35 | 365 | 1 | 329 | 5.19e-179 | 500 |
| Msa0265010 | AT2G31350.1 | 71.299 | 331 | 88 | 4 | 35 | 365 | 1 | 324 | 1.93e-175 | 491 |
| Msa0265010 | AT2G31350.2 | 71.299 | 331 | 87 | 4 | 35 | 365 | 1 | 323 | 1.94e-175 | 491 |
| Msa0265010 | AT2G43430.1 | 68.182 | 330 | 103 | 2 | 37 | 365 | 3 | 331 | 6.29e-167 | 469 |
| Msa0265010 | AT2G43430.2 | 68.590 | 312 | 97 | 1 | 54 | 365 | 3 | 313 | 5.54e-161 | 454 |
| Msa0265010 | AT2G43430.3 | 70.383 | 287 | 84 | 1 | 79 | 365 | 1 | 286 | 1.90e-149 | 423 |
| Msa0265010 | AT2G31350.3 | 71.200 | 250 | 65 | 4 | 35 | 284 | 1 | 243 | 2.25e-127 | 366 |
| Msa0265010 | AT3G10850.1 | 39.695 | 262 | 144 | 7 | 112 | 365 | 1 | 256 | 1.53e-58 | 191 |
Find 120 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCTACTTTCCGGGATC+TGG | 0.175790 | 2_2:-65192892 | Msa0265010:CDS |
| TGTATATTGTTTATCATTCT+TGG | 0.206845 | 2_2:-65191265 | Msa0265010:three_prime_UTR |
| CCACATCAGCTTCTACTTTC+CGG | 0.270037 | 2_2:-65192899 | Msa0265010:CDS |
| CTGGAATGTTTAACGATTGC+CGG | 0.288512 | 2_2:+65191647 | None:intergenic |
| AAATAGAAAAGTATATAAAA+AGG | 0.306392 | 2_2:-65195282 | None:intergenic |
| TTTGAGTTCATTCTTGTTCT+CGG | 0.306933 | 2_2:-65191317 | Msa0265010:three_prime_UTR |
| CCGTATCAATATCATGTAAA+AGG | 0.307674 | 2_2:+65194031 | None:intergenic |
| TATCATTCTCATATTGCTAT+TGG | 0.314958 | 2_2:+65191504 | None:intergenic |
| AAGGAAAGAGAGAGAAGAAA+TGG | 0.315953 | 2_2:+65195156 | None:intergenic |
| CACATCAGCTTCTACTTTCC+GGG | 0.337719 | 2_2:-65192898 | Msa0265010:CDS |
| TTGAAGCTTTAGAAAGCATT+TGG | 0.357702 | 2_2:+65195129 | None:intergenic |
| GTAGAATTAAAAGCAAGATA+TGG | 0.359608 | 2_2:-65193886 | Msa0265010:CDS |
| CAGTGTCGTGTCCGCGTCAA+TGG | 0.364183 | 2_2:+65191530 | None:intergenic |
| CAACCAAACAGTAAAATTAG+TGG | 0.367910 | 2_2:-65195183 | Msa0265010:CDS |
| CTTATGGTCGAAGGCTTGTT+TGG | 0.372291 | 2_2:+65191421 | None:intergenic |
| CTGCAATGAGGAAGACATAT+TGG | 0.381228 | 2_2:+65194481 | None:intergenic |
| CATGTTGCATTACAGGTGAT+TGG | 0.382874 | 2_2:-65193128 | Msa0265010:intron |
| GATCGAAGTTCCTTGTTTCC+AGG | 0.387556 | 2_2:+65191909 | None:intergenic |
| TAGAATTAAAAGCAAGATAT+GGG | 0.393374 | 2_2:-65193885 | Msa0265010:CDS |
| CTACGTAAAACCAACACTTA+TGG | 0.405208 | 2_2:+65191405 | None:intergenic |
| TTTAGAAAAGGAATTCTGTA+TGG | 0.405567 | 2_2:-65194590 | Msa0265010:CDS |
| GCTTCTACTTTCCGGGATCT+GGG | 0.408664 | 2_2:-65192891 | Msa0265010:CDS |
| ACCGACAACAAAAGGATTCC+TGG | 0.413397 | 2_2:-65193098 | Msa0265010:CDS |
| AGCAGTAACTGTGGCTCTAT+TGG | 0.416104 | 2_2:-65191156 | Msa0265010:three_prime_UTR |
| AAACAAAGTTGCCTCACATT+AGG | 0.419544 | 2_2:+65194611 | None:intergenic |
| TTGAGTTCATTCTTGTTCTC+GGG | 0.423353 | 2_2:-65191316 | Msa0265010:three_prime_UTR |
| TCTGCATCATCTGCTGTGGC+TGG | 0.424261 | 2_2:+65191628 | None:intergenic |
| TTACAGATGCAATCTTCTCT+TGG | 0.426089 | 2_2:-65192116 | Msa0265010:intron |
| TTCCTCATTGCAGATTGAAT+TGG | 0.430159 | 2_2:-65194471 | Msa0265010:intron |
| TGAGAGCTGGGTTTAGTGTC+TGG | 0.445616 | 2_2:-65194634 | Msa0265010:CDS |
| CATATAAAACGCTGCGTGGA+GGG | 0.449951 | 2_2:-65194544 | Msa0265010:CDS |
| TCATGCGGCAAACTCTTTGA+AGG | 0.453311 | 2_2:-65192835 | Msa0265010:CDS |
| AGGAAAGAGAGAGAAGAAAT+GGG | 0.454889 | 2_2:+65195157 | None:intergenic |
| GGTGATAAGTGGATGTTTGC+TGG | 0.459231 | 2_2:-65193053 | Msa0265010:CDS |
| AGCAGATGATGCAGAAGCCC+TGG | 0.460161 | 2_2:-65191620 | Msa0265010:CDS |
| GTACATCCAACGCACAAATC+CGG | 0.468577 | 2_2:-65191666 | Msa0265010:CDS |
| GTGGCTTCCCTTCGAAGTAA+AGG | 0.472139 | 2_2:-65191873 | Msa0265010:CDS |
| GTTCAGCAACCGACAACAAA+AGG | 0.473223 | 2_2:-65193106 | Msa0265010:CDS |
| TTCATTGACCTACTCTATAC+AGG | 0.474441 | 2_2:+65191560 | None:intergenic |
| ACTTATCACCGTCATTCAAA+TGG | 0.477333 | 2_2:+65193066 | None:intergenic |
| TTCGCATTGAGGCTCGAACC+TGG | 0.481254 | 2_2:-65191927 | Msa0265010:CDS |
| TGAAGAAGAAGGGGTGGTGG+TGG | 0.492021 | 2_2:-65195232 | Msa0265010:CDS |
| TTGCTCAATGCATCTATGAC+AGG | 0.496375 | 2_2:+65193973 | None:intergenic |
| GATATTGATACGGGCACAGT+TGG | 0.506415 | 2_2:-65194021 | Msa0265010:CDS |
| TTAGAAAGCATTTGGAAGGA+AGG | 0.508637 | 2_2:+65195137 | None:intergenic |
| GATTCCGACCACACTGAAGA+TGG | 0.510448 | 2_2:-65191713 | Msa0265010:CDS |
| TTGCTTGTCGGATGATACCC+AGG | 0.511740 | 2_2:+65191602 | None:intergenic |
| TGTCAGTGTCGTGTCGGTGT+TGG | 0.513449 | 2_2:-65191464 | Msa0265010:three_prime_UTR |
| CAGTATATACTTGTATCGTC+TGG | 0.514843 | 2_2:+65192077 | None:intergenic |
| GTCGCTCACTTAGAGTGGCT+CGG | 0.516030 | 2_2:-65194517 | Msa0265010:CDS |
| AAATGTGTTGATGAAGAAGA+AGG | 0.521915 | 2_2:-65195243 | Msa0265010:exon |
| CATCGAGAGACAAATCTACA+AGG | 0.524234 | 2_2:+65191209 | None:intergenic |
| CGATTGCCGGATTTGTGCGT+TGG | 0.527139 | 2_2:+65191660 | None:intergenic |
| AAGGAACTTCGATCCTATGC+TGG | 0.529395 | 2_2:-65191900 | Msa0265010:CDS |
| AAGCATAAATATTCCACAGA+TGG | 0.536492 | 2_2:+65191373 | None:intergenic |
| TGTCCATTACTTGCACCTCA+TGG | 0.537197 | 2_2:+65193030 | None:intergenic |
| GGGCAAGCCTTTACTTCGAA+GGG | 0.545894 | 2_2:+65191866 | None:intergenic |
| TAAAGACTCCTGTATAGAGT+AGG | 0.546403 | 2_2:-65191568 | Msa0265010:three_prime_UTR |
| GGAAGCCACGTGGCCAGCAT+AGG | 0.547492 | 2_2:+65191887 | None:intergenic |
| TGGGCAAGCCTTTACTTCGA+AGG | 0.550848 | 2_2:+65191865 | None:intergenic |
| GGCTTCTGCATCATCTGCTG+TGG | 0.554650 | 2_2:+65191624 | None:intergenic |
| TTCAAATGGATATCAATGCC+AGG | 0.559408 | 2_2:+65193080 | None:intergenic |
| ACTCTTTGAAGGAACCCCTC+AGG | 0.563265 | 2_2:-65192824 | Msa0265010:CDS |
| TGATGAAGAAGAAGGGGTGG+TGG | 0.565711 | 2_2:-65195235 | Msa0265010:CDS |
| GACCACACTGAAGATGGAAA+AGG | 0.569691 | 2_2:-65191707 | Msa0265010:CDS |
| AATGTGTTGATGAAGAAGAA+GGG | 0.575161 | 2_2:-65195242 | Msa0265010:exon |
| GGGTATCATCCGACAAGCAA+AGG | 0.576116 | 2_2:-65191599 | Msa0265010:CDS |
| GGCTAGTCGCTCACTTAGAG+TGG | 0.577501 | 2_2:-65194522 | Msa0265010:CDS |
| AGGTAAAACCAACCTCCTGA+GGG | 0.580185 | 2_2:+65192809 | None:intergenic |
| CAGGTAAAACCAACCTCCTG+AGG | 0.581515 | 2_2:+65192808 | None:intergenic |
| GCGTTGGATGTACGAAGGAA+TGG | 0.582552 | 2_2:+65191676 | None:intergenic |
| CTTCTACTTTCCGGGATCTG+GGG | 0.582769 | 2_2:-65192890 | Msa0265010:CDS |
| ATATAAAACGCTGCGTGGAG+GGG | 0.583237 | 2_2:-65194543 | Msa0265010:CDS |
| AGCTTTAGAAAGCATTTGGA+AGG | 0.583539 | 2_2:+65195133 | None:intergenic |
| CCATATAAAACGCTGCGTGG+AGG | 0.583820 | 2_2:-65194545 | Msa0265010:CDS |
| TGCTTGTCGGATGATACCCA+GGG | 0.585286 | 2_2:+65191603 | None:intergenic |
| ATTTGAATGACGGTGATAAG+TGG | 0.585793 | 2_2:-65193064 | Msa0265010:CDS |
| GAGGCTCGAACCTGGAAACA+AGG | 0.587160 | 2_2:-65191919 | Msa0265010:CDS |
| AAAAGCAAGATATGGGGCAA+AGG | 0.588467 | 2_2:-65193878 | Msa0265010:intron |
| GGTACGCATAATTGTCACTC+AGG | 0.597259 | 2_2:+65194052 | None:intergenic |
| CACCAATTCAATCTGCAATG+AGG | 0.598023 | 2_2:+65194469 | None:intergenic |
| AAGCCTTCGACCATAAGTGT+TGG | 0.604404 | 2_2:-65191415 | Msa0265010:three_prime_UTR |
| CACCAGTGTGATCATGATGA+TGG | 0.604627 | 2_2:+65193914 | None:intergenic |
| ATGACAGGCGTAGCTTCAGA+AGG | 0.605200 | 2_2:+65193988 | None:intergenic |
| GCAGATGATGCAGAAGCCCT+GGG | 0.608833 | 2_2:-65191619 | Msa0265010:CDS |
| GAATTCTGTATGGATTTATG+CGG | 0.611448 | 2_2:-65194580 | Msa0265010:CDS |
| CCGGAAAGTAGAAGCTGATG+TGG | 0.611653 | 2_2:+65192899 | None:intergenic |
| ATTGATATCCATTTGAATGA+CGG | 0.612448 | 2_2:-65193074 | Msa0265010:CDS |
| ATGTGACCTCGAGTGTGACC+AGG | 0.616405 | 2_2:+65193005 | None:intergenic |
| CTTTGAAGGAACCCCTCAGG+AGG | 0.623384 | 2_2:-65192821 | Msa0265010:intron |
| AAACCAACACTTATGGTCGA+AGG | 0.626558 | 2_2:+65191412 | None:intergenic |
| GCATAATTGTCACTCAGGCA+AGG | 0.628647 | 2_2:+65194057 | None:intergenic |
| CACATGTGTCAGTGTCGTGT+CGG | 0.630652 | 2_2:-65191470 | Msa0265010:three_prime_UTR |
| ATAATACGGACTTCGCATTG+AGG | 0.642456 | 2_2:-65191938 | Msa0265010:CDS |
| TTAGTGTCTGGCCTAATGTG+AGG | 0.647103 | 2_2:-65194622 | Msa0265010:CDS |
| CATCATCATGATCACACTGG+TGG | 0.648943 | 2_2:-65193913 | Msa0265010:CDS |
| TGGCCATGAGGTGCAAGTAA+TGG | 0.649042 | 2_2:-65193033 | Msa0265010:CDS |
| ATGTGTTGATGAAGAAGAAG+GGG | 0.649395 | 2_2:-65195241 | Msa0265010:exon |
| GACACACCTGGTCACACTCG+AGG | 0.650356 | 2_2:-65193011 | Msa0265010:intron |
| GTAGTTAATGAATCCATCTG+TGG | 0.650438 | 2_2:-65191386 | Msa0265010:three_prime_UTR |
| AACAATATACACTACCATGA+GGG | 0.651918 | 2_2:+65191277 | None:intergenic |
| ACGCCATATAAAACGCTGCG+TGG | 0.653296 | 2_2:-65194548 | Msa0265010:CDS |
| TCGAAGTAAAGGCTTGCCCA+CGG | 0.654918 | 2_2:-65191862 | Msa0265010:intron |
| AGAATTAAAAGCAAGATATG+GGG | 0.659094 | 2_2:-65193884 | Msa0265010:CDS |
| ATCGAGAGACAAATCTACAA+GGG | 0.659837 | 2_2:+65191210 | None:intergenic |
| ACTTTGTTCAGCTTGTCATG+CGG | 0.663144 | 2_2:-65192850 | Msa0265010:CDS |
| TGTTGGATACTAACACATGT+CGG | 0.666015 | 2_2:-65191447 | Msa0265010:three_prime_UTR |
| GACGATACAAGTATATACTG+TGG | 0.667417 | 2_2:-65192074 | Msa0265010:CDS |
| CACCATCATCATGATCACAC+TGG | 0.670155 | 2_2:-65193916 | Msa0265010:CDS |
| AAACAATATACACTACCATG+AGG | 0.672917 | 2_2:+65191276 | None:intergenic |
| TTTGTGCGTTGGATGTACGA+AGG | 0.675267 | 2_2:+65191671 | None:intergenic |
| TGTTGATGAAGAAGAAGGGG+TGG | 0.677937 | 2_2:-65195238 | Msa0265010:exon |
| GTGCAAGTAATGGACACACC+TGG | 0.681660 | 2_2:-65193023 | Msa0265010:CDS |
| CTGTGGACACGAGTACACAT+TGG | 0.683875 | 2_2:-65192057 | Msa0265010:intron |
| TCGATCCTATGCTGGCCACG+TGG | 0.686304 | 2_2:-65191892 | Msa0265010:CDS |
| TACTTCGAAGGGAAGCCACG+TGG | 0.689024 | 2_2:+65191877 | None:intergenic |
| GTGGATGTTTGCTGGCCATG+AGG | 0.690608 | 2_2:-65193045 | Msa0265010:CDS |
| ATACGTAAGAGCAGTAACTG+TGG | 0.714134 | 2_2:-65191165 | Msa0265010:three_prime_UTR |
| GGTAAAACCAACCTCCTGAG+GGG | 0.722369 | 2_2:+65192810 | None:intergenic |
| TGAACTATGAACCATTGACG+CGG | 0.727666 | 2_2:-65191541 | Msa0265010:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTGATAATTATTTGATT+TGG | - | chr2_2:65191550-65191569 | Msa0265010:three_prime_UTR | 15.0% |
| !!! | ATTATAATAACTTGTTCTAT+AGG | - | chr2_2:65191667-65191686 | Msa0265010:CDS | 15.0% |
| !!! | ATGATTATTCTTTGTTTTTT+AGG | - | chr2_2:65191772-65191791 | Msa0265010:intron | 15.0% |
| !!! | AATTTTTTAGTAAACTGTTA+AGG | - | chr2_2:65191997-65192016 | Msa0265010:intron | 15.0% |
| !! | CTATAGTAAAAGATAAAATA+AGG | + | chr2_2:65192181-65192200 | None:intergenic | 15.0% |
| !!! | CACATTTTTTTGAAATAATT+AGG | - | chr2_2:65192347-65192366 | Msa0265010:intron | 15.0% |
| !!! | TATTGACATTTTGATATATT+TGG | - | chr2_2:65193153-65193172 | Msa0265010:intron | 15.0% |
| !!! | TTTAATGAGCATAATTTTTA+GGG | - | chr2_2:65193819-65193838 | Msa0265010:intron | 15.0% |
| !!! | TTTCAATTTTTTTCGTTGTT+AGG | - | chr2_2:65191392-65191411 | Msa0265010:three_prime_UTR | 20.0% |
| !!! | TAGTGTTGATAATTTGATAA+TGG | - | chr2_2:65191729-65191748 | Msa0265010:intron | 20.0% |
| !! | TAGAATTAAAAGCAAGATAT+GGG | - | chr2_2:65192544-65192563 | Msa0265010:intron | 20.0% |
| !! | AAACGAAGAAAAAAATACAT+AGG | + | chr2_2:65192597-65192616 | None:intergenic | 20.0% |
| !! | AAGGATTAAAATACACAAAT+TGG | - | chr2_2:65192739-65192758 | Msa0265010:intron | 20.0% |
| !! | ATTATGCTCATTAAAGATAT+TGG | + | chr2_2:65193814-65193833 | None:intergenic | 20.0% |
| !!! | CTTTAATGAGCATAATTTTT+AGG | - | chr2_2:65193818-65193837 | Msa0265010:intron | 20.0% |
| !!! | TGTATTTTTGCAGAATAATA+CGG | - | chr2_2:65194477-65194496 | Msa0265010:CDS | 20.0% |
| !! | TGTATATTGTTTATCATTCT+TGG | - | chr2_2:65195164-65195183 | Msa0265010:CDS | 20.0% |
| !! | CATTTAGAATTGCTTAATTC+TGG | - | chr2_2:65191585-65191604 | Msa0265010:exon | 25.0% |
| !! | ACTTATTACATTGACTGAAA+AGG | - | chr2_2:65191705-65191724 | Msa0265010:CDS | 25.0% |
| ! | TTTAGAAAAGGAATTCTGTA+TGG | - | chr2_2:65191839-65191858 | Msa0265010:intron | 25.0% |
| !! | CCTTTTACATGATATTGATA+CGG | - | chr2_2:65192398-65192417 | Msa0265010:intron | 25.0% |
| !! | CTTTTACATGATATTGATAC+GGG | - | chr2_2:65192399-65192418 | Msa0265010:intron | 25.0% |
| ! | GTAGAATTAAAAGCAAGATA+TGG | - | chr2_2:65192543-65192562 | Msa0265010:intron | 25.0% |
| ! | AGAATTAAAAGCAAGATATG+GGG | - | chr2_2:65192545-65192564 | Msa0265010:intron | 25.0% |
| ! | GTGTTTCAAATACAATTCAT+TGG | - | chr2_2:65192635-65192654 | Msa0265010:intron | 25.0% |
| ! | GCTTACAGAATATAGAAAAA+AGG | - | chr2_2:65192720-65192739 | Msa0265010:intron | 25.0% |
| !! | GAAAATTATTTGGTTAGTTG+TGG | + | chr2_2:65192864-65192883 | None:intergenic | 25.0% |
| !!! | GATCTTTTGGGAAAATTATT+TGG | + | chr2_2:65192874-65192893 | None:intergenic | 25.0% |
| ! | CAAAGAGTAAAATTAGAGAA+GGG | + | chr2_2:65192922-65192941 | None:intergenic | 25.0% |
| ! | TCATACCTAACAGTAATATT+TGG | - | chr2_2:65193096-65193115 | Msa0265010:CDS | 25.0% |
| ! | TTTCTGTATATTATTATGCC+TGG | - | chr2_2:65193243-65193262 | Msa0265010:intron | 25.0% |
| ! | TATATTATTATGCCTGGTTA+TGG | - | chr2_2:65193249-65193268 | Msa0265010:intron | 25.0% |
| ! | ATTGATATCCATTTGAATGA+CGG | - | chr2_2:65193355-65193374 | Msa0265010:intron | 25.0% |
| ! | GTTTGACAATAATGCAAATA+AGG | + | chr2_2:65193455-65193474 | None:intergenic | 25.0% |
| ! | TGTTTATTTATACTGTAAGC+AGG | - | chr2_2:65193507-65193526 | Msa0265010:intron | 25.0% |
| !!! | ATAATTTTTAGGGCTTGTTT+GGG | - | chr2_2:65193829-65193848 | Msa0265010:intron | 25.0% |
| ! | TAAAAATGACTGAGTTCATT+CGG | - | chr2_2:65194059-65194078 | Msa0265010:CDS | 25.0% |
| ! | ATTTACTTGCATTTACAACT+AGG | + | chr2_2:65194212-65194231 | None:intergenic | 25.0% |
| ! | ACTACTCATAAAGAATAACA+AGG | + | chr2_2:65194613-65194632 | None:intergenic | 25.0% |
| !! | ATGTGTCACTAATATTTCTT+TGG | - | chr2_2:65194634-65194653 | Msa0265010:CDS | 25.0% |
| ! | ACTCTTTAGATAAAAGCAAA+AGG | + | chr2_2:65194680-65194699 | None:intergenic | 25.0% |
| ! | TCTAAAGAGTAAGTATTCTT+TGG | - | chr2_2:65194690-65194709 | Msa0265010:intron | 25.0% |
| ! | CTAAAGAGTAAGTATTCTTT+GGG | - | chr2_2:65194691-65194710 | Msa0265010:intron | 25.0% |
| ! | AAAAATTATCCTTTGCTTGT+CGG | + | chr2_2:65194842-65194861 | None:intergenic | 25.0% |
| ! | TATCATTCTCATATTGCTAT+TGG | + | chr2_2:65194928-65194947 | None:intergenic | 25.0% |
| ! | AAATGTGTTGATGAAGAAGA+AGG | - | chr2_2:65191186-65191205 | Msa0265010:three_prime_UTR | 30.0% |
| ! | AATGTGTTGATGAAGAAGAA+GGG | - | chr2_2:65191187-65191206 | Msa0265010:three_prime_UTR | 30.0% |
| CAACCAAACAGTAAAATTAG+TGG | - | chr2_2:65191246-65191265 | Msa0265010:three_prime_UTR | 30.0% | |
| ! | TTGCCACTAATTTTACTGTT+TGG | + | chr2_2:65191252-65191271 | None:intergenic | 30.0% |
| !! | TTGAAGCTTTAGAAAGCATT+TGG | + | chr2_2:65191303-65191322 | None:intergenic | 30.0% |
| AAAAAAAAAAAGACGAACCC+TGG | + | chr2_2:65191356-65191375 | None:intergenic | 30.0% | |
| !!! | AGGCAACTTTGTTTTAGAAA+AGG | - | chr2_2:65191827-65191846 | Msa0265010:intron | 30.0% |
| GAATTCTGTATGGATTTATG+CGG | - | chr2_2:65191849-65191868 | Msa0265010:intron | 30.0% | |
| GGTGTAATTTGATTATCTAC+TGG | - | chr2_2:65192018-65192037 | Msa0265010:intron | 30.0% | |
| !! | CATAAGTTTTGTGAGTGTTT+GGG | - | chr2_2:65192041-65192060 | Msa0265010:intron | 30.0% |
| AATAAGCTGTAAATCCAAAC+TGG | - | chr2_2:65192255-65192274 | Msa0265010:intron | 30.0% | |
| ATAAGCTGTAAATCCAAACT+GGG | - | chr2_2:65192256-65192275 | Msa0265010:intron | 30.0% | |
| CCGTATCAATATCATGTAAA+AGG | + | chr2_2:65192401-65192420 | None:intergenic | 30.0% | |
| ATGCATTGAGCAAGAAAAAT+CGG | - | chr2_2:65192466-65192485 | Msa0265010:intron | 30.0% | |
| TAAAGAGCAAATTAGAAGTG+AGG | - | chr2_2:65192658-65192677 | Msa0265010:intron | 30.0% | |
| TTTCTATATTCTGTAAGCTG+CGG | + | chr2_2:65192718-65192737 | None:intergenic | 30.0% | |
| CCAAAGAGTAAAATTAGAGA+AGG | + | chr2_2:65192923-65192942 | None:intergenic | 30.0% | |
| ! | CCTTCTCTAATTTTACTCTT+TGG | - | chr2_2:65192920-65192939 | Msa0265010:intron | 30.0% |
| TGTTGCCAAATATTACTGTT+AGG | + | chr2_2:65193104-65193123 | None:intergenic | 30.0% | |
| GAAGTTGTTGCAAATTTGAT+TGG | - | chr2_2:65193124-65193143 | Msa0265010:intron | 30.0% | |
| ! | ATTGATCGTACAGTTTTACT+TGG | - | chr2_2:65193213-65193232 | Msa0265010:intron | 30.0% |
| TTTCAAATTTCAAGGACTTC+TGG | + | chr2_2:65193734-65193753 | None:intergenic | 30.0% | |
| !!! | CATAATTTTTAGGGCTTGTT+TGG | - | chr2_2:65193828-65193847 | Msa0265010:intron | 30.0% |
| TCGTTGAATATGTCTTCTTA+AGG | - | chr2_2:65194094-65194113 | Msa0265010:intron | 30.0% | |
| TATGTATGTCGAAAAATGCT+TGG | - | chr2_2:65194133-65194152 | Msa0265010:intron | 30.0% | |
| AAAATGTTATTGCTGATGCA+AGG | - | chr2_2:65194186-65194205 | Msa0265010:intron | 30.0% | |
| !! | TACAAAAGTACTAGAGTCAA+TGG | + | chr2_2:65194461-65194480 | None:intergenic | 30.0% |
| AAGCATAAATATTCCACAGA+TGG | + | chr2_2:65195059-65195078 | None:intergenic | 30.0% | |
| ! | TTTGAGTTCATTCTTGTTCT+CGG | - | chr2_2:65195112-65195131 | Msa0265010:CDS | 30.0% |
| TTGTTCTCGGGTTTAAAAAT+AGG | - | chr2_2:65195125-65195144 | Msa0265010:CDS | 30.0% | |
| TAAAAATAGGTATTCCCTCA+TGG | - | chr2_2:65195138-65195157 | Msa0265010:CDS | 30.0% | |
| AACAATATACACTACCATGA+GGG | + | chr2_2:65195155-65195174 | None:intergenic | 30.0% | |
| AAACAATATACACTACCATG+AGG | + | chr2_2:65195156-65195175 | None:intergenic | 30.0% | |
| TAAAAAGGAGAGAGAGAAAG+AGG | - | chr2_2:65191162-65191181 | Msa0265010:three_prime_UTR | 35.0% | |
| ! | ATGTGTTGATGAAGAAGAAG+GGG | - | chr2_2:65191188-65191207 | Msa0265010:three_prime_UTR | 35.0% |
| AGGAAAGAGAGAGAAGAAAT+GGG | + | chr2_2:65191275-65191294 | None:intergenic | 35.0% | |
| AAGGAAAGAGAGAGAAGAAA+TGG | + | chr2_2:65191276-65191295 | None:intergenic | 35.0% | |
| !! | TTAGAAAGCATTTGGAAGGA+AGG | + | chr2_2:65191295-65191314 | None:intergenic | 35.0% |
| !! | AGCTTTAGAAAGCATTTGGA+AGG | + | chr2_2:65191299-65191318 | None:intergenic | 35.0% |
| ATCTTGAAGCGTGATTATGA+AGG | - | chr2_2:65191419-65191438 | Msa0265010:three_prime_UTR | 35.0% | |
| !!! | TTTGTTTTTTAGGTGAGAGC+TGG | - | chr2_2:65191782-65191801 | Msa0265010:intron | 35.0% |
| !!! | TTGTTTTTTAGGTGAGAGCT+GGG | - | chr2_2:65191783-65191802 | Msa0265010:intron | 35.0% |
| AAACAAAGTTGCCTCACATT+AGG | + | chr2_2:65191821-65191840 | None:intergenic | 35.0% | |
| TTCCTCATTGCAGATTGAAT+TGG | - | chr2_2:65191958-65191977 | Msa0265010:intron | 35.0% | |
| !! | GCATAAGTTTTGTGAGTGTT+TGG | - | chr2_2:65192040-65192059 | Msa0265010:intron | 35.0% |
| TGATAACATAACCGCAGATT+AGG | + | chr2_2:65192329-65192348 | None:intergenic | 35.0% | |
| AAGCGTATGATAACTGCAAA+AGG | - | chr2_2:65192786-65192805 | Msa0265010:intron | 35.0% | |
| GATGAATATCCTAATGCTCA+CGG | - | chr2_2:65192808-65192827 | Msa0265010:intron | 35.0% | |
| ! | TAGTGAAAACGGGATCTTTT+GGG | + | chr2_2:65192886-65192905 | None:intergenic | 35.0% |
| ! | ATAGTGAAAACGGGATCTTT+TGG | + | chr2_2:65192887-65192906 | None:intergenic | 35.0% |
| TGACTGAAGGATAGTGAAAA+CGG | + | chr2_2:65192897-65192916 | None:intergenic | 35.0% | |
| ATGTGTAGACCCATATTTCT+AGG | + | chr2_2:65192961-65192980 | None:intergenic | 35.0% | |
| TGGGTCTACACATACATATA+TGG | - | chr2_2:65192968-65192987 | Msa0265010:intron | 35.0% | |
| CTTGCTAACTATCATTTCTG+TGG | - | chr2_2:65193006-65193025 | Msa0265010:intron | 35.0% | |
| GAGAAAATGCTAAGTAGACA+AGG | + | chr2_2:65193078-65193097 | None:intergenic | 35.0% | |
| TTCAAATGGATATCAATGCC+AGG | + | chr2_2:65193352-65193371 | None:intergenic | 35.0% | |
| ACTTATCACCGTCATTCAAA+TGG | + | chr2_2:65193366-65193385 | None:intergenic | 35.0% | |
| ATTTGAATGACGGTGATAAG+TGG | - | chr2_2:65193365-65193384 | Msa0265010:intron | 35.0% | |
| AAAAAGAACAAGTTAGTGCC+AGG | + | chr2_2:65193643-65193662 | None:intergenic | 35.0% | |
| ! | GCGGGTATTTTCAAATTTCA+AGG | + | chr2_2:65193742-65193761 | None:intergenic | 35.0% |
| AATTTGAAAATACCCGCACA+AGG | - | chr2_2:65193745-65193764 | Msa0265010:intron | 35.0% | |
| ATTTGAAAATACCCGCACAA+GGG | - | chr2_2:65193746-65193765 | Msa0265010:intron | 35.0% | |
| ATTTAAATTGCAGCCAAACG+AGG | - | chr2_2:65193776-65193795 | Msa0265010:intron | 35.0% | |
| TCGCTGTAATAATATGAGAG+TGG | - | chr2_2:65193852-65193871 | Msa0265010:intron | 35.0% | |
| CGCTGTAATAATATGAGAGT+GGG | - | chr2_2:65193853-65193872 | Msa0265010:intron | 35.0% | |
| TACACTAAGATTGCAGACTT+GGG | + | chr2_2:65193933-65193952 | None:intergenic | 35.0% | |
| GTTGTCAAGTCAGTTATACT+TGG | - | chr2_2:65194240-65194259 | Msa0265010:intron | 35.0% | |
| ACATCCCACATCTTCAATTA+TGG | - | chr2_2:65194275-65194294 | Msa0265010:intron | 35.0% | |
| CTCTCCATAATTGAAGATGT+GGG | + | chr2_2:65194282-65194301 | None:intergenic | 35.0% | |
| ACTCTCCATAATTGAAGATG+TGG | + | chr2_2:65194283-65194302 | None:intergenic | 35.0% | |
| AGAAGATTGCATCTGTAACA+GGG | + | chr2_2:65194311-65194330 | None:intergenic | 35.0% | |
| TTACAGATGCAATCTTCTCT+TGG | - | chr2_2:65194313-65194332 | Msa0265010:intron | 35.0% | |
| CAGTATATACTTGTATCGTC+TGG | + | chr2_2:65194355-65194374 | None:intergenic | 35.0% | |
| GACGATACAAGTATATACTG+TGG | - | chr2_2:65194355-65194374 | Msa0265010:intron | 35.0% | |
| AAACAAAGCAAAGAACACTG+AGG | + | chr2_2:65194418-65194437 | None:intergenic | 35.0% | |
| AAAAGGCCAATGATTGAAAC+AGG | + | chr2_2:65194663-65194682 | None:intergenic | 35.0% | |
| TAAAGACTCCTGTATAGAGT+AGG | - | chr2_2:65194861-65194880 | Msa0265010:intron | 35.0% | |
| TTCATTGACCTACTCTATAC+AGG | + | chr2_2:65194872-65194891 | None:intergenic | 35.0% | |
| TGTTGGATACTAACACATGT+CGG | - | chr2_2:65194982-65195001 | Msa0265010:intron | 35.0% | |
| CTACGTAAAACCAACACTTA+TGG | + | chr2_2:65195027-65195046 | None:intergenic | 35.0% | |
| GTAGTTAATGAATCCATCTG+TGG | - | chr2_2:65195043-65195062 | Msa0265010:intron | 35.0% | |
| TTGAGTTCATTCTTGTTCTC+GGG | - | chr2_2:65195113-65195132 | Msa0265010:CDS | 35.0% | |
| ATCGAGAGACAAATCTACAA+GGG | + | chr2_2:65195222-65195241 | None:intergenic | 35.0% | |
| CTGCAATGAGGAAGACATAT+TGG | + | chr2_2:65191951-65191970 | None:intergenic | 40.0% | |
| CACCAATTCAATCTGCAATG+AGG | + | chr2_2:65191963-65191982 | None:intergenic | 40.0% | |
| CTAAGTTTCCCAAGCTGATA+GGG | - | chr2_2:65192280-65192299 | Msa0265010:intron | 40.0% | |
| TTCAGAAACCCTATCAGCTT+GGG | + | chr2_2:65192291-65192310 | None:intergenic | 40.0% | |
| TATGCTGAAAGCCTAATCTG+CGG | - | chr2_2:65192315-65192334 | Msa0265010:intron | 40.0% | |
| TTGCTCAATGCATCTATGAC+AGG | + | chr2_2:65192459-65192478 | None:intergenic | 40.0% | |
| AAAAGCAAGATATGGGGCAA+AGG | - | chr2_2:65192551-65192570 | Msa0265010:intron | 40.0% | |
| GACTGAAGGATAGTGAAAAC+GGG | + | chr2_2:65192896-65192915 | None:intergenic | 40.0% | |
| TTAGAGAAGGGAATGACTGA+AGG | + | chr2_2:65192910-65192929 | None:intergenic | 40.0% | |
| ! | AGTTAGCAAGACAGAGTGTT+AGG | + | chr2_2:65192996-65193015 | None:intergenic | 40.0% |
| TTGTCAAGGGGAGAAAGAAA+GGG | + | chr2_2:65193034-65193053 | None:intergenic | 40.0% | |
| ATTATGCCTGGTTATGGCAA+AGG | - | chr2_2:65193255-65193274 | Msa0265010:intron | 40.0% | |
| TTATGCCTGGTTATGGCAAA+GGG | - | chr2_2:65193256-65193275 | Msa0265010:intron | 40.0% | |
| CCTGTAATGCAACATGAGAA+GGG | + | chr2_2:65193297-65193316 | None:intergenic | 40.0% | |
| ACCTGTAATGCAACATGAGA+AGG | + | chr2_2:65193298-65193317 | None:intergenic | 40.0% | |
| CATGTTGCATTACAGGTGAT+TGG | - | chr2_2:65193301-65193320 | Msa0265010:intron | 40.0% | |
| ! | TGTCAAACCTTCTTGTTGTG+TGG | - | chr2_2:65193467-65193486 | Msa0265010:intron | 40.0% |
| ACTTTGTTCAGCTTGTCATG+CGG | - | chr2_2:65193579-65193598 | Msa0265010:intron | 40.0% | |
| TTTCAAGGACTTCTGGCAAA+GGG | + | chr2_2:65193727-65193746 | None:intergenic | 40.0% | |
| ATTTCAAGGACTTCTGGCAA+AGG | + | chr2_2:65193728-65193747 | None:intergenic | 40.0% | |
| TAAATCACAAGTCCCTTGTG+CGG | + | chr2_2:65193761-65193780 | None:intergenic | 40.0% | |
| ACACTAAGATTGCAGACTTG+GGG | + | chr2_2:65193932-65193951 | None:intergenic | 40.0% | |
| GTACACTAAGATTGCAGACT+TGG | + | chr2_2:65193934-65193953 | None:intergenic | 40.0% | |
| TGCAATCTTAGTGTACGAGA+AGG | - | chr2_2:65193938-65193957 | Msa0265010:CDS | 40.0% | |
| GCAATCTTAGTGTACGAGAA+GGG | - | chr2_2:65193939-65193958 | Msa0265010:CDS | 40.0% | |
| ! | TCATACACGTGCTGATCAAA+GGG | + | chr2_2:65193977-65193996 | None:intergenic | 40.0% |
| ! | TTCATACACGTGCTGATCAA+AGG | + | chr2_2:65193978-65193997 | None:intergenic | 40.0% |
| ! | CACGTGTATGAAGTGTTCAA+TGG | - | chr2_2:65193986-65194005 | Msa0265010:CDS | 40.0% |
| GAGAAGATTGCATCTGTAAC+AGG | + | chr2_2:65194312-65194331 | None:intergenic | 40.0% | |
| AAGTACTAGAGTCAATGGCA+CGG | + | chr2_2:65194456-65194475 | None:intergenic | 40.0% | |
| ATAATACGGACTTCGCATTG+AGG | - | chr2_2:65194491-65194510 | Msa0265010:CDS | 40.0% | |
| TGGTAGCCTGTTTCAATCAT+TGG | - | chr2_2:65194654-65194673 | Msa0265010:intron | 40.0% | |
| ! | TTTTCCATCTTCAGTGTGGT+CGG | + | chr2_2:65194723-65194742 | None:intergenic | 40.0% |
| CTGGAATGTTTAACGATTGC+CGG | + | chr2_2:65194785-65194804 | None:intergenic | 40.0% | |
| TGAACTATGAACCATTGACG+CGG | - | chr2_2:65194888-65194907 | Msa0265010:intron | 40.0% | |
| AAACCAACACTTATGGTCGA+AGG | + | chr2_2:65195020-65195039 | None:intergenic | 40.0% | |
| CATCGAGAGACAAATCTACA+AGG | + | chr2_2:65195223-65195242 | None:intergenic | 40.0% | |
| ATACGTAAGAGCAGTAACTG+TGG | - | chr2_2:65195264-65195283 | Msa0265010:five_prime_UTR | 40.0% | |
| ! | TGTTGATGAAGAAGAAGGGG+TGG | - | chr2_2:65191191-65191210 | Msa0265010:three_prime_UTR | 45.0% |
| ACAGGAAGAAAAAGCGGACA+TGG | + | chr2_2:65191332-65191351 | None:intergenic | 45.0% | |
| CCTGGAACAGGAAGAAAAAG+CGG | + | chr2_2:65191338-65191357 | None:intergenic | 45.0% | |
| !!! | CGCTTTTTCTTCCTGTTCCA+GGG | - | chr2_2:65191336-65191355 | Msa0265010:three_prime_UTR | 45.0% |
| AAAAAGACGAACCCTGGAAC+AGG | + | chr2_2:65191350-65191369 | None:intergenic | 45.0% | |
| TTAGTGTCTGGCCTAATGTG+AGG | - | chr2_2:65191807-65191826 | Msa0265010:intron | 45.0% | |
| CATATAAAACGCTGCGTGGA+GGG | - | chr2_2:65191885-65191904 | Msa0265010:CDS | 45.0% | |
| ATATAAAACGCTGCGTGGAG+GGG | - | chr2_2:65191886-65191905 | Msa0265010:CDS | 45.0% | |
| CAGATTGAATTGGTGAGAGC+AGG | - | chr2_2:65191968-65191987 | Msa0265010:intron | 45.0% | |
| CCTATCAGCTTGGGAAACTT+AGG | + | chr2_2:65192282-65192301 | None:intergenic | 45.0% | |
| CCTAAGTTTCCCAAGCTGAT+AGG | - | chr2_2:65192279-65192298 | Msa0265010:intron | 45.0% | |
| CTTCAGAAACCCTATCAGCT+TGG | + | chr2_2:65192292-65192311 | None:intergenic | 45.0% | |
| GCATAATTGTCACTCAGGCA+AGG | + | chr2_2:65192375-65192394 | None:intergenic | 45.0% | |
| GGTACGCATAATTGTCACTC+AGG | + | chr2_2:65192380-65192399 | None:intergenic | 45.0% | |
| GATATTGATACGGGCACAGT+TGG | - | chr2_2:65192408-65192427 | Msa0265010:intron | 45.0% | |
| CACCATCATCATGATCACAC+TGG | - | chr2_2:65192513-65192532 | Msa0265010:intron | 45.0% | |
| CACCAGTGTGATCATGATGA+TGG | + | chr2_2:65192518-65192537 | None:intergenic | 45.0% | |
| CATCATCATGATCACACTGG+TGG | - | chr2_2:65192516-65192535 | Msa0265010:intron | 45.0% | |
| TCCAAGCAGGCCTAGAAATA+TGG | - | chr2_2:65192948-65192967 | Msa0265010:intron | 45.0% | |
| CCAAGCAGGCCTAGAAATAT+GGG | - | chr2_2:65192949-65192968 | Msa0265010:intron | 45.0% | |
| CTTGTCAAGGGGAGAAAGAA+AGG | + | chr2_2:65193035-65193054 | None:intergenic | 45.0% | |
| TTCTTTCTCCCCTTGACAAG+CGG | - | chr2_2:65193035-65193054 | Msa0265010:CDS | 45.0% | |
| ATCTGTTTCCCGCTTGTCAA+GGG | + | chr2_2:65193047-65193066 | None:intergenic | 45.0% | |
| AATCTGTTTCCCGCTTGTCA+AGG | + | chr2_2:65193048-65193067 | None:intergenic | 45.0% | |
| CCCTTCTCATGTTGCATTAC+AGG | - | chr2_2:65193294-65193313 | Msa0265010:intron | 45.0% | |
| GTTCAGCAACCGACAACAAA+AGG | - | chr2_2:65193323-65193342 | Msa0265010:intron | 45.0% | |
| ACCGACAACAAAAGGATTCC+TGG | - | chr2_2:65193331-65193350 | Msa0265010:intron | 45.0% | |
| !! | GCCAGGAATCCTTTTGTTGT+CGG | + | chr2_2:65193335-65193354 | None:intergenic | 45.0% |
| GGTGATAAGTGGATGTTTGC+TGG | - | chr2_2:65193376-65193395 | Msa0265010:intron | 45.0% | |
| TGTCCATTACTTGCACCTCA+TGG | + | chr2_2:65193402-65193421 | None:intergenic | 45.0% | |
| AGAAGAGCCACACAACAAGA+AGG | + | chr2_2:65193477-65193496 | None:intergenic | 45.0% | |
| CCACATCAGCTTCTACTTTC+CGG | - | chr2_2:65193530-65193549 | Msa0265010:intron | 45.0% | |
| CACATCAGCTTCTACTTTCC+GGG | - | chr2_2:65193531-65193550 | Msa0265010:intron | 45.0% | |
| GTAAAAATTGCCCCAGATCC+CGG | + | chr2_2:65193552-65193571 | None:intergenic | 45.0% | |
| !! | GGATCTGGGGCAATTTTTAC+AGG | - | chr2_2:65193552-65193571 | Msa0265010:intron | 45.0% |
| TCATGCGGCAAACTCTTTGA+AGG | - | chr2_2:65193594-65193613 | Msa0265010:intron | 45.0% | |
| AGGTAAAACCAACCTCCTGA+GGG | + | chr2_2:65193623-65193642 | None:intergenic | 45.0% | |
| AAATCACAAGTCCCTTGTGC+GGG | + | chr2_2:65193760-65193779 | None:intergenic | 45.0% | |
| AGAGTTTGAGTGTAGTGCGA+TGG | - | chr2_2:65193885-65193904 | Msa0265010:CDS | 45.0% | |
| CACTAAGATTGCAGACTTGG+GGG | + | chr2_2:65193931-65193950 | None:intergenic | 45.0% | |
| ! | CATACACGTGCTGATCAAAG+GGG | + | chr2_2:65193976-65193995 | None:intergenic | 45.0% |
| AGATTGCATCTGTAACAGGG+AGG | + | chr2_2:65194308-65194327 | None:intergenic | 45.0% | |
| ! | GATCGAAGTTCCTTGTTTCC+AGG | + | chr2_2:65194523-65194542 | None:intergenic | 45.0% |
| AAGGAACTTCGATCCTATGC+TGG | - | chr2_2:65194529-65194548 | Msa0265010:CDS | 45.0% | |
| GCAATTCCAAAACTCACCGT+GGG | + | chr2_2:65194586-65194605 | None:intergenic | 45.0% | |
| GACCACACTGAAGATGGAAA+AGG | - | chr2_2:65194722-65194741 | Msa0265010:intron | 45.0% | |
| ! | AGCCTTTTCCATCTTCAGTG+TGG | + | chr2_2:65194727-65194746 | None:intergenic | 45.0% |
| TTTGTGCGTTGGATGTACGA+AGG | + | chr2_2:65194761-65194780 | None:intergenic | 45.0% | |
| GTACATCCAACGCACAAATC+CGG | - | chr2_2:65194763-65194782 | Msa0265010:intron | 45.0% | |
| ! | CTTATGGTCGAAGGCTTGTT+TGG | + | chr2_2:65195011-65195030 | None:intergenic | 45.0% |
| AAGCCTTCGACCATAAGTGT+TGG | - | chr2_2:65195014-65195033 | Msa0265010:intron | 45.0% | |
| ! | AGCAGTAACTGTGGCTCTAT+TGG | - | chr2_2:65195273-65195292 | Msa0265010:five_prime_UTR | 45.0% |
| !!! | AAAAAATTGAAATTTTAATT+CGG | + | chr2_2:65191384-65191403 | None:intergenic | 5.0% |
| TGATGAAGAAGAAGGGGTGG+TGG | - | chr2_2:65191194-65191213 | Msa0265010:three_prime_UTR | 50.0% | |
| AGAAAAAGCGGACATGGCAG+TGG | + | chr2_2:65191326-65191345 | None:intergenic | 50.0% | |
| !!! | CCGCTTTTTCTTCCTGTTCC+AGG | - | chr2_2:65191335-65191354 | Msa0265010:three_prime_UTR | 50.0% |
| TGAGAGCTGGGTTTAGTGTC+TGG | - | chr2_2:65191795-65191814 | Msa0265010:intron | 50.0% | |
| ! | ACGCAGCGTTTTATATGGCG+TGG | + | chr2_2:65191882-65191901 | None:intergenic | 50.0% |
| ACGCCATATAAAACGCTGCG+TGG | - | chr2_2:65191881-65191900 | Msa0265010:CDS | 50.0% | |
| ! | CCTCCACGCAGCGTTTTATA+TGG | + | chr2_2:65191887-65191906 | None:intergenic | 50.0% |
| CCATATAAAACGCTGCGTGG+AGG | - | chr2_2:65191884-65191903 | Msa0265010:CDS | 50.0% | |
| TGGGAAACTTAGGCCCAGTT+TGG | + | chr2_2:65192272-65192291 | None:intergenic | 50.0% | |
| ATGACAGGCGTAGCTTCAGA+AGG | + | chr2_2:65192444-65192463 | None:intergenic | 50.0% | |
| AGCTTAGCTCCGTGAGCATT+AGG | + | chr2_2:65192820-65192839 | None:intergenic | 50.0% | |
| GGACAGAGAATGTTCCCTGT+AGG | + | chr2_2:65192843-65192862 | None:intergenic | 50.0% | |
| CTCTTTGGATGACTCCAAGC+AGG | - | chr2_2:65192935-65192954 | Msa0265010:intron | 50.0% | |
| !! | CCCATATTTCTAGGCCTGCT+TGG | + | chr2_2:65192952-65192971 | None:intergenic | 50.0% |
| TCTTTCTCCCCTTGACAAGC+GGG | - | chr2_2:65193036-65193055 | Msa0265010:CDS | 50.0% | |
| TCTGTTTCCCGCTTGTCAAG+GGG | + | chr2_2:65193046-65193065 | None:intergenic | 50.0% | |
| TGGCCATGAGGTGCAAGTAA+TGG | - | chr2_2:65193396-65193415 | Msa0265010:intron | 50.0% | |
| !! | GTGCAAGTAATGGACACACC+TGG | - | chr2_2:65193406-65193425 | Msa0265010:intron | 50.0% |
| CCGGAAAGTAGAAGCTGATG+TGG | + | chr2_2:65193533-65193552 | None:intergenic | 50.0% | |
| AGCTTCTACTTTCCGGGATC+TGG | - | chr2_2:65193537-65193556 | Msa0265010:intron | 50.0% | |
| GCTTCTACTTTCCGGGATCT+GGG | - | chr2_2:65193538-65193557 | Msa0265010:intron | 50.0% | |
| CTTCTACTTTCCGGGATCTG+GGG | - | chr2_2:65193539-65193558 | Msa0265010:intron | 50.0% | |
| ! | ACTCTTTGAAGGAACCCCTC+AGG | - | chr2_2:65193605-65193624 | Msa0265010:intron | 50.0% |
| GGTAAAACCAACCTCCTGAG+GGG | + | chr2_2:65193622-65193641 | None:intergenic | 50.0% | |
| CAGGTAAAACCAACCTCCTG+AGG | + | chr2_2:65193624-65193643 | None:intergenic | 50.0% | |
| !!! | CTCAGGAGGTTGGTTTTACC+TGG | - | chr2_2:65193622-65193641 | Msa0265010:intron | 50.0% |
| GTCACCACAAAGTCCTCGTT+TGG | + | chr2_2:65193792-65193811 | None:intergenic | 50.0% | |
| CTGTGGACACGAGTACACAT+TGG | - | chr2_2:65194372-65194391 | Msa0265010:intron | 50.0% | |
| GTGGCTTCCCTTCGAAGTAA+AGG | - | chr2_2:65194556-65194575 | Msa0265010:CDS | 50.0% | |
| GGGCAAGCCTTTACTTCGAA+GGG | + | chr2_2:65194566-65194585 | None:intergenic | 50.0% | |
| TGGGCAAGCCTTTACTTCGA+AGG | + | chr2_2:65194567-65194586 | None:intergenic | 50.0% | |
| TCGAAGTAAAGGCTTGCCCA+CGG | - | chr2_2:65194567-65194586 | Msa0265010:CDS | 50.0% | |
| CGCAATTCCAAAACTCACCG+TGG | + | chr2_2:65194587-65194606 | None:intergenic | 50.0% | |
| GATTCCGACCACACTGAAGA+TGG | - | chr2_2:65194716-65194735 | Msa0265010:intron | 50.0% | |
| GCGTTGGATGTACGAAGGAA+TGG | + | chr2_2:65194756-65194775 | None:intergenic | 50.0% | |
| TGCTTGTCGGATGATACCCA+GGG | + | chr2_2:65194829-65194848 | None:intergenic | 50.0% | |
| TTGCTTGTCGGATGATACCC+AGG | + | chr2_2:65194830-65194849 | None:intergenic | 50.0% | |
| GGGTATCATCCGACAAGCAA+AGG | - | chr2_2:65194830-65194849 | Msa0265010:intron | 50.0% | |
| CACATGTGTCAGTGTCGTGT+CGG | - | chr2_2:65194959-65194978 | Msa0265010:intron | 50.0% | |
| ! | TGAAGAAGAAGGGGTGGTGG+TGG | - | chr2_2:65191197-65191216 | Msa0265010:three_prime_UTR | 55.0% |
| ! | GGCTAGTCGCTCACTTAGAG+TGG | - | chr2_2:65191907-65191926 | Msa0265010:CDS | 55.0% |
| GTCGCTCACTTAGAGTGGCT+CGG | - | chr2_2:65191912-65191931 | Msa0265010:CDS | 55.0% | |
| TCTGTAAGCTGCGGCGATTC+AGG | + | chr2_2:65192709-65192728 | None:intergenic | 55.0% | |
| TCACGGAGCTAAGCTCCTAC+AGG | - | chr2_2:65192825-65192844 | Msa0265010:CDS | 55.0% | |
| CACGGAGCTAAGCTCCTACA+GGG | - | chr2_2:65192826-65192845 | Msa0265010:CDS | 55.0% | |
| CACAGCCCTTTGCCATAACC+AGG | + | chr2_2:65193264-65193283 | None:intergenic | 55.0% | |
| ! | GTGGATGTTTGCTGGCCATG+AGG | - | chr2_2:65193384-65193403 | Msa0265010:intron | 55.0% |
| ATGTGACCTCGAGTGTGACC+AGG | + | chr2_2:65193427-65193446 | None:intergenic | 55.0% | |
| ! | CTTTGAAGGAACCCCTCAGG+AGG | - | chr2_2:65193608-65193627 | Msa0265010:intron | 55.0% |
| GCAGCCAAACGAGGACTTTG+TGG | - | chr2_2:65193785-65193804 | Msa0265010:intron | 55.0% | |
| TTCGCATTGAGGCTCGAACC+TGG | - | chr2_2:65194502-65194521 | Msa0265010:CDS | 55.0% | |
| GAGGCTCGAACCTGGAAACA+AGG | - | chr2_2:65194510-65194529 | Msa0265010:CDS | 55.0% | |
| TACTTCGAAGGGAAGCCACG+TGG | + | chr2_2:65194555-65194574 | None:intergenic | 55.0% | |
| CGATTGCCGGATTTGTGCGT+TGG | + | chr2_2:65194772-65194791 | None:intergenic | 55.0% | |
| TCTGCATCATCTGCTGTGGC+TGG | + | chr2_2:65194804-65194823 | None:intergenic | 55.0% | |
| GGCTTCTGCATCATCTGCTG+TGG | + | chr2_2:65194808-65194827 | None:intergenic | 55.0% | |
| AGCAGATGATGCAGAAGCCC+TGG | - | chr2_2:65194809-65194828 | Msa0265010:intron | 55.0% | |
| GCAGATGATGCAGAAGCCCT+GGG | - | chr2_2:65194810-65194829 | Msa0265010:intron | 55.0% | |
| ! | TGTCAGTGTCGTGTCGGTGT+TGG | - | chr2_2:65194965-65194984 | Msa0265010:intron | 55.0% |
| GACACACCTGGTCACACTCG+AGG | - | chr2_2:65193418-65193437 | Msa0265010:intron | 60.0% | |
| GAAGGAACCCCTCAGGAGGT+TGG | - | chr2_2:65193612-65193631 | Msa0265010:intron | 60.0% | |
| TCGATCCTATGCTGGCCACG+TGG | - | chr2_2:65194537-65194556 | Msa0265010:CDS | 60.0% | |
| ! | GGCTTGCCCACGGTGAGTTT+TGG | - | chr2_2:65194577-65194596 | Msa0265010:CDS | 60.0% |
| CAGTGTCGTGTCCGCGTCAA+TGG | + | chr2_2:65194902-65194921 | None:intergenic | 60.0% | |
| GGAAGCCACGTGGCCAGCAT+AGG | + | chr2_2:65194545-65194564 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 65191154 | 65195297 | 65191154 | ID=Msa0265010;Name=Msa0265010 |
| chr2_2 | mRNA | 65191154 | 65195297 | 65191154 | ID=Msa0265010-mRNA-1;Parent=Msa0265010;Name=Msa0265010-mRNA-1;_AED=0.17;_eAED=0.17;_QI=42|1|1|1|1|1|8|434|365 |
| chr2_2 | exon | 65191154 | 65191734 | 65191154 | ID=Msa0265010-mRNA-1:exon:20496;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65191863 | 65191961 | 65191863 | ID=Msa0265010-mRNA-1:exon:20495;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65192058 | 65192132 | 65192058 | ID=Msa0265010-mRNA-1:exon:20494;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65192822 | 65192922 | 65192822 | ID=Msa0265010-mRNA-1:exon:20493;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65193012 | 65193135 | 65193012 | ID=Msa0265010-mRNA-1:exon:20492;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65193879 | 65194082 | 65193879 | ID=Msa0265010-mRNA-1:exon:20491;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65194472 | 65194657 | 65194472 | ID=Msa0265010-mRNA-1:exon:20490;Parent=Msa0265010-mRNA-1 |
| chr2_2 | exon | 65195094 | 65195297 | 65195094 | ID=Msa0265010-mRNA-1:exon:20489;Parent=Msa0265010-mRNA-1 |
| chr2_2 | five_prime_UTR | 65195256 | 65195297 | 65195256 | ID=Msa0265010-mRNA-1:five_prime_utr;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65195094 | 65195255 | 65195094 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65194472 | 65194657 | 65194472 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65193879 | 65194082 | 65193879 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65193012 | 65193135 | 65193012 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65192822 | 65192922 | 65192822 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65192058 | 65192132 | 65192058 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65191863 | 65191961 | 65191863 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | CDS | 65191588 | 65191734 | 65191588 | ID=Msa0265010-mRNA-1:cds;Parent=Msa0265010-mRNA-1 |
| chr2_2 | three_prime_UTR | 65191154 | 65191587 | 65191154 | ID=Msa0265010-mRNA-1:three_prime_utr;Parent=Msa0265010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
