AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0266930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266930 MtrunA17_Chr7g0231911 95.253 316 13 2 1 316 1 314 0.0 622
Msa0266930 MtrunA17_Chr3g0122411 54.348 138 60 2 98 235 115 249 8.88e-42 150
Msa0266930 MtrunA17_Chr4g0046991 72.840 81 22 0 151 231 73 153 1.32e-36 129
Msa0266930 MtrunA17_Chr2g0282521 68.539 89 27 1 138 226 52 139 3.55e-35 124
Msa0266930 MtrunA17_Chr5g0420051 51.852 135 58 3 98 228 127 258 5.44e-35 131
Msa0266930 MtrunA17_Chr7g0258471 50.382 131 61 1 104 230 91 221 5.64e-35 131
Msa0266930 MtrunA17_Chr8g0360361 68.235 85 27 0 151 235 65 149 7.81e-35 125
Msa0266930 MtrunA17_Chr4g0061651 53.175 126 54 2 101 224 74 196 8.42e-35 131
Msa0266930 MtrunA17_Chr8g0334671 67.857 84 27 0 144 227 180 263 2.75e-34 127
Msa0266930 MtrunA17_Chr3g0132091 56.000 100 43 1 134 232 55 154 4.49e-34 127
Msa0266930 MtrunA17_Chr2g0308321 60.377 106 36 2 145 250 165 264 9.41e-34 129
Msa0266930 MtrunA17_Chr7g0270541 58.182 110 44 1 128 235 120 229 3.29e-33 129
Msa0266930 MtrunA17_Chr8g0386271 55.102 98 44 0 138 235 86 183 1.20e-32 124
Msa0266930 MtrunA17_Chr2g0302791 58.586 99 37 1 151 245 139 237 3.33e-31 123
Msa0266930 MtrunA17_Chr7g0224821 65.000 80 28 0 151 230 77 156 5.27e-31 119
Msa0266930 MtrunA17_Chr1g0194121 58.947 95 39 0 136 230 132 226 9.76e-31 122
Msa0266930 MtrunA17_Chr8g0377421 39.205 176 75 5 87 242 58 221 1.01e-29 115
Msa0266930 MtrunA17_Chr1g0162871 66.667 81 27 0 151 231 104 184 2.08e-29 118
Msa0266930 MtrunA17_Chr8g0377401 46.324 136 51 2 99 226 116 237 5.02e-29 112
Msa0266930 MtrunA17_Chr2g0286661 54.430 79 36 0 151 229 103 181 4.20e-21 94.0
Msa0266930 MtrunA17_Chr1g0175031 50.000 98 45 1 104 197 23 120 1.35e-19 83.2
Msa0266930 MtrunA17_Chr2g0317041 56.522 69 30 0 129 197 77 145 6.74e-18 79.3
Msa0266930 MtrunA17_Chr8g0377431 38.889 108 63 2 98 204 99 204 1.70e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266930 AT1G27360.2 56.098 123 53 1 103 224 126 248 5.91e-38 139
Msa0266930 AT1G27360.1 56.098 123 53 1 103 224 126 248 5.91e-38 139
Msa0266930 AT1G27360.3 56.098 123 53 1 103 224 126 248 5.91e-38 139
Msa0266930 AT1G27360.4 56.098 123 53 1 103 224 126 248 5.91e-38 139
Msa0266930 AT1G27370.6 54.839 124 54 1 103 224 126 249 3.60e-37 136
Msa0266930 AT1G27370.1 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT1G27370.5 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT1G27370.3 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT1G27370.2 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT1G27370.4 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT1G27370.7 54.839 124 54 1 103 224 126 249 1.30e-36 135
Msa0266930 AT5G43270.3 53.488 129 57 2 98 224 115 242 1.08e-35 133
Msa0266930 AT5G43270.1 53.488 129 57 2 98 224 115 242 1.08e-35 133
Msa0266930 AT5G43270.2 53.488 129 57 2 98 224 115 242 1.08e-35 133
Msa0266930 AT2G33810.1 63.043 92 29 1 137 228 45 131 2.04e-35 125
Msa0266930 AT3G15270.1 61.458 96 37 0 151 246 63 158 5.27e-35 125
Msa0266930 AT1G53160.3 70.000 80 24 0 151 230 54 133 2.52e-33 121
Msa0266930 AT3G57920.1 52.066 121 43 1 104 224 27 132 2.57e-33 126
Msa0266930 AT2G42200.1 63.736 91 33 0 148 238 71 161 2.76e-33 126
Msa0266930 AT1G53160.2 60.000 100 34 1 137 230 34 133 3.21e-33 120
Msa0266930 AT1G53160.1 60.000 100 34 1 137 230 34 133 3.21e-33 120
Msa0266930 AT1G02065.1 70.513 78 23 0 147 224 184 261 3.35e-33 125
Msa0266930 AT3G60030.1 53.390 118 47 1 118 235 102 211 1.00e-32 128
Msa0266930 AT1G69170.1 54.464 112 39 1 113 224 98 197 1.04e-32 125
Msa0266930 AT5G50570.1 57.303 89 38 0 144 232 94 182 7.36e-31 119
Msa0266930 AT5G50570.2 57.303 89 38 0 144 232 94 182 7.36e-31 119
Msa0266930 AT5G50670.1 57.303 89 38 0 144 232 94 182 7.36e-31 119
Msa0266930 AT5G50670.2 57.303 89 38 0 144 232 94 182 7.36e-31 119
Msa0266930 AT1G76580.2 66.667 81 27 0 150 230 113 193 1.12e-30 122
Msa0266930 AT1G76580.3 66.667 81 27 0 150 230 113 193 1.21e-30 122
Msa0266930 AT1G76580.1 66.667 81 27 0 150 230 113 193 2.07e-30 121
Msa0266930 AT1G20980.1 70.130 77 23 0 151 227 120 196 3.25e-30 121
Msa0266930 AT2G47070.1 69.333 75 23 0 151 225 106 180 1.02e-29 119
Msa0266930 AT5G18830.3 43.434 99 56 0 138 236 125 223 2.22e-19 89.4
Msa0266930 AT5G18830.1 43.434 99 56 0 138 236 125 223 2.29e-19 89.4
Msa0266930 AT5G18830.2 43.434 99 56 0 138 236 125 223 2.30e-19 89.4
Msa0266930 AT1G02065.2 45.283 106 44 4 104 205 149 244 6.62e-19 84.7
Msa0266930 AT2G47070.2 72.549 51 14 0 175 225 1 51 8.92e-18 84.3

Find 126 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTGGTGGTGGGCTGGC+TGG 0.192462 2_2:-67851158 Msa0266930:CDS
TGGTGGGAAGGCGGCGGTGG+TGG 0.218516 2_2:-67851102 Msa0266930:CDS
GTGGTGGTGGTGGGCTGGCT+GGG 0.252093 2_2:-67851157 Msa0266930:CDS
CGTTTATTTCTCTAAACTTT+AGG 0.253414 2_2:+67845745 None:intergenic
AAACTTTAGGCCGTGGTTCT+TGG 0.255544 2_2:+67845758 None:intergenic
AGCCAGTAAGTCCGAATAAT+TGG 0.259835 2_2:+67845821 None:intergenic
GATGTGAGTGGTGGTGGTGG+TGG 0.270666 2_2:-67851167 Msa0266930:CDS
ATCCAATTATTCGGACTTAC+TGG 0.273786 2_2:-67845823 Msa0266930:three_prime_UTR
AAACCCAACACCACAACTTT+TGG 0.295801 2_2:+67850969 None:intergenic
TGGTGGTGGTGGGCTGGCTG+GGG 0.322295 2_2:-67851156 Msa0266930:CDS
CATATGTTGTGGGAAATAAT+TGG 0.328845 2_2:+67846028 None:intergenic
TGTCATCTCGGACTGATTCA+TGG 0.336380 2_2:-67846208 Msa0266930:CDS
ATGTGAGTGGTGGTGGTGGT+GGG 0.341112 2_2:-67851166 Msa0266930:CDS
ACATTAGTGATGGTTTCTTA+TGG 0.352970 2_2:-67845994 Msa0266930:exon
TGGTGGTGGGAAGGCGGCGG+TGG 0.366642 2_2:-67851105 Msa0266930:CDS
CACCTCACATGTTTGAAGTT+GGG 0.387603 2_2:-67851209 Msa0266930:CDS
GGGAAGGCGGCGGTGGTGGG+TGG 0.390135 2_2:-67851098 Msa0266930:CDS
CTGATCATCATCCAATTATT+CGG 0.390385 2_2:-67845832 Msa0266930:three_prime_UTR
GGAGGATATTGTGGTGGTGG+TGG 0.392988 2_2:-67851119 Msa0266930:CDS
GGCGGTGGTGGGTGGTTATA+CGG 0.400036 2_2:-67851090 Msa0266930:CDS
AAAAGTTGTGGTGTTGGGTT+TGG 0.400118 2_2:-67850967 Msa0266930:CDS
GTGACAAGGTGTCAGGTGGA+TGG 0.400175 2_2:-67851065 Msa0266930:CDS
GGTGGGAAGGCGGCGGTGGT+GGG 0.423536 2_2:-67851101 Msa0266930:CDS
TTTGAGGATGTGAGTGGTGG+TGG 0.427873 2_2:-67851173 Msa0266930:CDS
TGGTGGTGGTGGGAAGGCGG+CGG 0.428805 2_2:-67851108 Msa0266930:CDS
GCACCAAAAGTTGTGGTGTT+GGG 0.429036 2_2:-67850972 Msa0266930:CDS
AGAAAACCGAGCATCGATAA+TGG 0.432077 2_2:-67846129 Msa0266930:CDS
CGTCGCCTTCGTTCTGAGGC+AGG 0.441947 2_2:+67851294 None:intergenic
AAACATGTGAGGTGTGGATC+AGG 0.445259 2_2:+67851218 None:intergenic
CGTTATTGCTAGTATTACTT+TGG 0.445973 2_2:+67851465 None:intergenic
GAGGATGTGAGTGGTGGTGG+TGG 0.448169 2_2:-67851170 Msa0266930:CDS
CTTTCTCTCTTCTGTCATCT+CGG 0.450629 2_2:-67846220 Msa0266930:CDS
GTTTCTTATGGCACGGAGCT+TGG 0.450748 2_2:-67845982 Msa0266930:three_prime_UTR
ATACGGTGGAGGTGTGTCTC+GGG 0.452355 2_2:-67851252 Msa0266930:CDS
ACACCTCACATGTTTGAAGT+TGG 0.453165 2_2:-67851210 Msa0266930:CDS
CATGTTTGAAGTTGGGGAAG+AGG 0.460346 2_2:-67851202 Msa0266930:CDS
CATACGGTGGAGGTGTGTCT+CGG 0.463683 2_2:-67851253 Msa0266930:CDS
ATATAAACAAACATGGACTT+TGG 0.464767 2_2:-67851518 None:intergenic
AGTCAGTCTATCAAAATTGT+TGG 0.468505 2_2:-67845926 Msa0266930:three_prime_UTR
TAGACTGACTGCGATGACTA+TGG 0.468671 2_2:+67845939 None:intergenic
AGTTGTAGAAGGAGACTGGC+AGG 0.470576 2_2:-67847254 Msa0266930:CDS
GCCTAGCCATTATCGATGCT+CGG 0.471586 2_2:+67846123 None:intergenic
TAGCTAGACCTGCCTCATTA+CGG 0.474745 2_2:+67851330 None:intergenic
GATTCTGTCAACAGTGTAGC+AGG 0.478919 2_2:-67850938 Msa0266930:intron
GGCACCAAAAGTTGTGGTGT+TGG 0.478965 2_2:-67850973 Msa0266930:CDS
TACGGCGGTGACAAGGTGTC+AGG 0.483370 2_2:-67851072 Msa0266930:CDS
AATTCCTCCCAACAGAATCA+TGG 0.485519 2_2:+67847204 None:intergenic
GAACCAGGATGCTAGCTAGC+TGG 0.489896 2_2:-67845636 Msa0266930:three_prime_UTR
TAATGCAGCACTGCATCTTA+CGG 0.490156 2_2:+67846166 None:intergenic
CAAAGTAATACTAGCAATAA+CGG 0.492833 2_2:-67851464 Msa0266930:CDS
TATGGCACGGAGCTTGGATA+CGG 0.492925 2_2:-67845976 Msa0266930:three_prime_UTR
ACCTCACATGTTTGAAGTTG+GGG 0.495007 2_2:-67851208 Msa0266930:CDS
AAGAAACAACTCAATATATG+AGG 0.496341 2_2:+67845889 None:intergenic
TTTCTCTAAACTTTAGGCCG+TGG 0.498084 2_2:+67845751 None:intergenic
GGGCTGGCTGGGGAGAAGAA+AGG 0.498662 2_2:-67851146 Msa0266930:CDS
TGAATGCTAAGGAGTATCAT+AGG 0.506629 2_2:-67851025 Msa0266930:CDS
AAGAAGTTGTAGAAGGAGAC+TGG 0.506657 2_2:-67847258 Msa0266930:CDS
CCATGCCGTGGAAGATTACA+AGG 0.507477 2_2:-67846066 Msa0266930:CDS
GGCTGGCTGGGGAGAAGAAA+GGG 0.509726 2_2:-67851145 Msa0266930:CDS
GGAGTATCATAGGAGACATA+AGG 0.511196 2_2:-67851015 Msa0266930:CDS
GCCGCCAACCGTAATGAGGC+AGG 0.511283 2_2:-67851338 Msa0266930:CDS
GACTGATTCATGGCTTTCAC+CGG 0.514906 2_2:-67846198 Msa0266930:CDS
CTAGCTAGCTGGACTAGTTA+CGG 0.516257 2_2:-67845625 Msa0266930:three_prime_UTR
CGTCCGTCGCCTTCGTTCTG+AGG 0.519896 2_2:+67851290 None:intergenic
ATATTGTGGTGGTGGTGGGA+AGG 0.519952 2_2:-67851114 Msa0266930:CDS
GAGGATATTGTGGTGGTGGT+GGG 0.521993 2_2:-67851118 Msa0266930:CDS
GGAAATAATTGGACTCGGAA+TGG 0.522818 2_2:+67846039 None:intergenic
AGAGCTCCCATGATTCTGTT+GGG 0.525869 2_2:-67847211 Msa0266930:CDS
AGCTAGCATCCTGGTTCTAG+AGG 0.527117 2_2:+67845642 None:intergenic
TGACAAGGTGTCAGGTGGAT+GGG 0.531625 2_2:-67851064 Msa0266930:CDS
CATCTTACGGAGAGGTCAGC+CGG 0.534335 2_2:+67846179 None:intergenic
AAGAGCTCCCATGATTCTGT+TGG 0.535482 2_2:-67847212 Msa0266930:CDS
TAAACAAACATGGACTTTGG+AGG 0.536667 2_2:-67851515 None:intergenic
TTGTGGTGGTGGTGGGAAGG+CGG 0.537813 2_2:-67851111 Msa0266930:CDS
GGGGAGAAGAAAGGGAAAGG+AGG 0.540943 2_2:-67851137 Msa0266930:CDS
CTCCGCCGCCAACCGTAATG+AGG 0.541623 2_2:-67851342 Msa0266930:CDS
TGCCTCATTACGGTTGGCGG+CGG 0.542538 2_2:+67851340 None:intergenic
AAAGGAGGATATTGTGGTGG+TGG 0.543034 2_2:-67851122 Msa0266930:CDS
CATCAAATTCTGACACAACA+TGG 0.543897 2_2:+67847288 None:intergenic
TTATTCGGACTTACTGGCTG+TGG 0.546694 2_2:-67845817 Msa0266930:three_prime_UTR
ACCTGCCTCATTACGGTTGG+CGG 0.547212 2_2:+67851337 None:intergenic
TGCAACAATCTTACCTTGTG+AGG 0.547389 2_2:+67847181 None:intergenic
AAAGGGAAAGGAGGATATTG+TGG 0.551862 2_2:-67851128 Msa0266930:CDS
ATTCCTCCCAACAGAATCAT+GGG 0.563033 2_2:+67847205 None:intergenic
CGACAGTATCGGAGTGCATA+CGG 0.565269 2_2:-67851269 Msa0266930:CDS
GATCTCCTTGTAATCTTCCA+CGG 0.568098 2_2:+67846061 None:intergenic
TATCGGAGTGCATACGGTGG+AGG 0.569830 2_2:-67851263 Msa0266930:CDS
AATACGTCTTAGACAGAGAC+TGG 0.570424 2_2:-67846100 Msa0266930:CDS
TTGTGGGAAATAATTGGACT+CGG 0.572180 2_2:+67846034 None:intergenic
GTGGTTATACGGCGGTGACA+AGG 0.572879 2_2:-67851079 Msa0266930:CDS
CCTTGTAATCTTCCACGGCA+TGG 0.577549 2_2:+67846066 None:intergenic
TTCCGCAGACACATTAGTGA+TGG 0.581420 2_2:-67846004 Msa0266930:exon
AGTGATGGTTTCTTATGGCA+CGG 0.585253 2_2:-67845989 Msa0266930:three_prime_UTR
AGTCCAGCTAGCTAGCATCC+TGG 0.586047 2_2:+67845633 None:intergenic
AAACAAACATGGACTTTGGA+GGG 0.586271 2_2:-67851514 None:intergenic
AGCAATAACGGTAACAGTAA+CGG 0.588128 2_2:-67851452 Msa0266930:CDS
TACGGTGGAGGTGTGTCTCG+GGG 0.588358 2_2:-67851251 Msa0266930:CDS
GGTTTGTGAGATGCATTCAA+AGG 0.590461 2_2:-67850994 Msa0266930:CDS
CGTGGCATTGATGAATGCTA+AGG 0.590898 2_2:-67851036 Msa0266930:CDS
AACTTCAAACATGTGAGGTG+TGG 0.592893 2_2:+67851212 None:intergenic
TTCAAAGGCACCAAAAGTTG+TGG 0.596745 2_2:-67850979 Msa0266930:CDS
AAGGCGACGGACGACAGTAT+CGG 0.601886 2_2:-67851280 Msa0266930:CDS
AGTAGTGGTAGTACTACTAC+TGG 0.602278 2_2:-67851416 Msa0266930:CDS
TCTTGGATCAAGATTTCATG+CGG 0.608746 2_2:+67845775 None:intergenic
GGCGGTGACAAGGTGTCAGG+TGG 0.614891 2_2:-67851069 Msa0266930:CDS
TCTGCGGAAACATATGTTGT+GGG 0.616543 2_2:+67846018 None:intergenic
ACCGAGCATCGATAATGGCT+AGG 0.618479 2_2:-67846124 Msa0266930:CDS
TAGACCTGCCTCATTACGGT+TGG 0.619602 2_2:+67851334 None:intergenic
GCATTTGCAGCACCATGCCG+TGG 0.620143 2_2:-67846078 Msa0266930:CDS
GTACTACTACTGGTACTGCA+TGG 0.620845 2_2:-67851406 Msa0266930:CDS
AACCATCACTAATGTGTCTG+CGG 0.630280 2_2:+67846002 None:intergenic
GCTAGCATCCTGGTTCTAGA+GGG 0.637320 2_2:+67845643 None:intergenic
CTGCCTCAGAACGAAGGCGA+CGG 0.639717 2_2:-67851293 Msa0266930:CDS
TCCCCAACTTCAAACATGTG+AGG 0.641757 2_2:+67851207 None:intergenic
GCTGGGGAGAAGAAAGGGAA+AGG 0.645912 2_2:-67851140 Msa0266930:CDS
GTTGTAGAAGGAGACTGGCA+GGG 0.647920 2_2:-67847253 Msa0266930:CDS
GGGAAAGGAGGATATTGTGG+TGG 0.654744 2_2:-67851125 Msa0266930:CDS
TCAGGTGGATGGGTGTAACG+TGG 0.655827 2_2:-67851054 Msa0266930:CDS
GTTGGGAGGAATTCCTCACA+AGG 0.661568 2_2:-67847194 Msa0266930:intron
ATGTACCTGCCTCAGAACGA+AGG 0.668073 2_2:-67851299 Msa0266930:CDS
GTCTGCGGAAACATATGTTG+TGG 0.669116 2_2:+67846017 None:intergenic
GCTCCCATGATTCTGTTGGG+AGG 0.673767 2_2:-67847208 Msa0266930:CDS
AAATCTTGATCCAAGAACCA+CGG 0.687026 2_2:-67845768 Msa0266930:three_prime_UTR
CAGCACTGCATCTTACGGAG+AGG 0.706479 2_2:+67846171 None:intergenic
CAGTATCGGAGTGCATACGG+TGG 0.746660 2_2:-67851266 Msa0266930:CDS
GGTGGTGGGTGGTTATACGG+CGG 0.751778 2_2:-67851087 Msa0266930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAGTAAATTTTTTTTGT+AGG - chr2_2:67848516-67848535 Msa0266930:intron 10.0%
!!! ATAAGTAAATTTTTTTTGTA+GGG - chr2_2:67848517-67848536 Msa0266930:intron 10.0%
!!! ACAAAATTTTGAATATTTAT+AGG - chr2_2:67849006-67849025 Msa0266930:intron 10.0%
!!! CAAAATTTTGAATATTTATA+GGG - chr2_2:67849007-67849026 Msa0266930:intron 10.0%
!!! TTAACCATTTTTTATAAAAT+CGG - chr2_2:67849056-67849075 Msa0266930:intron 10.0%
!!! TTTTTATTTTTGAAATTTTC+TGG + chr2_2:67849339-67849358 None:intergenic 10.0%
!!! GTTTTTAATTTTATGTTTTA+GGG - chr2_2:67849618-67849637 Msa0266930:intron 10.0%
!!! TTAAAACTTTTAAAACATAA+GGG + chr2_2:67850307-67850326 None:intergenic 10.0%
!!! AACCTTTTTTTAATTTTTTT+TGG - chr2_2:67850463-67850482 Msa0266930:intron 10.0%
!! AACCAAAAAAAATTAAAAAA+AGG + chr2_2:67850468-67850487 None:intergenic 10.0%
!! ATAATATTTACTGCTAAATT+TGG + chr2_2:67846342-67846361 None:intergenic 15.0%
!! ATTTGACAAAAAAAAATGAT+TGG - chr2_2:67846593-67846612 Msa0266930:intron 15.0%
!! TTTATTGATAAAATAGTTTG+AGG + chr2_2:67847202-67847221 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr2_2:67847945-67847964 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr2_2:67847944-67847963 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr2_2:67847723-67847742 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr2_2:67847854-67847873 Msa0266930:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr2_2:67847944-67847963 Msa0266930:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr2_2:67847945-67847964 Msa0266930:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr2_2:67847945-67847964 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr2_2:67848206-67848225 None:intergenic 15.0%
!!! GTTTTTCAACAATTTTTTAT+AGG - chr2_2:67848236-67848255 Msa0266930:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr2_2:67848290-67848309 None:intergenic 15.0%
!! TTGAAAAATTTATGAGTTTA+AGG - chr2_2:67848456-67848475 Msa0266930:intron 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - chr2_2:67848484-67848503 Msa0266930:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - chr2_2:67848485-67848504 Msa0266930:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr2_2:67847945-67847964 Msa0266930:intron 15.0%
!! TTACTTAACTGAATATTTAT+GGG + chr2_2:67848731-67848750 None:intergenic 15.0%
!! TTTACTTAACTGAATATTTA+TGG + chr2_2:67848732-67848751 None:intergenic 15.0%
!! TAAATATTCAGTTAAGTAAA+TGG - chr2_2:67848732-67848751 Msa0266930:intron 15.0%
!!! AAGTGTGATTTAATTTTATA+GGG + chr2_2:67848819-67848838 None:intergenic 15.0%
!!! AAAGTGTGATTTAATTTTAT+AGG + chr2_2:67848820-67848839 None:intergenic 15.0%
!!! AAAATGTGATTTTATTTTGT+AGG - chr2_2:67848975-67848994 Msa0266930:intron 15.0%
!!! AAATGTGATTTTATTTTGTA+GGG - chr2_2:67848976-67848995 Msa0266930:intron 15.0%
!! GAAAAGAAAAAAAAAGTAAA+TGG + chr2_2:67849034-67849053 None:intergenic 15.0%
!!! TAACCATTTTTTATAAAATC+GGG - chr2_2:67849057-67849076 Msa0266930:intron 15.0%
!! GAATTATATTTATCTAATGT+AGG - chr2_2:67849148-67849167 Msa0266930:intron 15.0%
!! ATAATAATCACAATAACAAA+TGG - chr2_2:67849413-67849432 Msa0266930:intron 15.0%
!!! AAAAAATGAATTGATTTTAG+AGG - chr2_2:67849514-67849533 Msa0266930:intron 15.0%
!!! GGTTTTTAATTTTATGTTTT+AGG - chr2_2:67849617-67849636 Msa0266930:intron 15.0%
!! GATAATTAATATGAAAAATG+TGG - chr2_2:67849662-67849681 Msa0266930:intron 15.0%
!! TTCAAAAAAAGTAAATATCA+TGG + chr2_2:67849884-67849903 None:intergenic 15.0%
!!! TTATATATTTTCAATGCATT+AGG + chr2_2:67849995-67850014 None:intergenic 15.0%
!! AAAAAAAATATTGAAAACGT+AGG + chr2_2:67850231-67850250 None:intergenic 15.0%
!!! CGTTTTCAATATTTTTTTTA+AGG - chr2_2:67850232-67850251 Msa0266930:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr2_2:67850276-67850295 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr2_2:67850277-67850296 None:intergenic 15.0%
!!! CTTAAAACTTTTAAAACATA+AGG + chr2_2:67850308-67850327 None:intergenic 15.0%
!!! ATGTTTTAAAAGTTTTAAGT+TGG - chr2_2:67850309-67850328 Msa0266930:intron 15.0%
!!! TATTTTTAGGGATATTAAAA+TGG + chr2_2:67851312-67851331 None:intergenic 15.0%
!!! GTTCTTAACTTTTATTTTTA+GGG + chr2_2:67851324-67851343 None:intergenic 15.0%
!!! AGTTCTTAACTTTTATTTTT+AGG + chr2_2:67851325-67851344 None:intergenic 15.0%
!! ACATAACAACAATTATATGT+AGG + chr2_2:67846179-67846198 None:intergenic 20.0%
!!! TATAATTGTTGTTATGTTCA+CGG - chr2_2:67846182-67846201 Msa0266930:CDS 20.0%
!!! CTATTTTCTACTAGTAAATA+TGG + chr2_2:67846286-67846305 None:intergenic 20.0%
!!! CGTTTTATTTATGTAATCTT+CGG - chr2_2:67846643-67846662 Msa0266930:intron 20.0%
!!! TCAGAAAAGAGTTTTATTTT+GGG + chr2_2:67847170-67847189 None:intergenic 20.0%
!!! CACTATTGCTAATATTTTTT+TGG + chr2_2:67847345-67847364 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr2_2:67847593-67847612 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr2_2:67847594-67847613 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr2_2:67847688-67847707 None:intergenic 20.0%
!! AGATATAGGTAACAAAAATA+TGG + chr2_2:67848325-67848344 None:intergenic 20.0%
!!! ACAGACACAAATTTTTTATA+GGG - chr2_2:67848687-67848706 Msa0266930:intron 20.0%
!! TACTTAACTGAATATTTATG+GGG + chr2_2:67848730-67848749 None:intergenic 20.0%
!! TTACTTACCTGAATATTTAT+GGG + chr2_2:67848760-67848779 None:intergenic 20.0%
!! TTTACTTACCTGAATATTTA+TGG + chr2_2:67848761-67848780 None:intergenic 20.0%
!! TAAATATTCAGGTAAGTAAA+TGG - chr2_2:67848761-67848780 Msa0266930:intron 20.0%
!! CAAAATTCAGAATATTTATG+TGG + chr2_2:67848788-67848807 None:intergenic 20.0%
!!! TGCTGATGAAATTTTTTATA+GGG + chr2_2:67848848-67848867 None:intergenic 20.0%
!!! TTGCTGATGAAATTTTTTAT+AGG + chr2_2:67848849-67848868 None:intergenic 20.0%
!!! AAATTTTATGCTAGCATTTT+CGG - chr2_2:67848915-67848934 Msa0266930:intron 20.0%
!!! TAACCCGATTTTATAAAAAA+TGG + chr2_2:67849063-67849082 None:intergenic 20.0%
!! ATTAATATAGATGTGGATAT+TGG + chr2_2:67849187-67849206 None:intergenic 20.0%
!!! TAGTTGTATAGTTTTCTTTT+TGG + chr2_2:67849297-67849316 None:intergenic 20.0%
!!! TTAAAGGTGTAAAAATTATG+TGG - chr2_2:67849543-67849562 Msa0266930:intron 20.0%
!!! TAAAGGTGTAAAAATTATGT+GGG - chr2_2:67849544-67849563 Msa0266930:intron 20.0%
!! AATTAATATGAAAAATGTGG+TGG - chr2_2:67849665-67849684 Msa0266930:intron 20.0%
!!! ATAAGAGTACACAATTTTTT+TGG - chr2_2:67850011-67850030 Msa0266930:intron 20.0%
!!! GTTTATTTTAGTTTTCATGT+TGG - chr2_2:67850280-67850299 Msa0266930:intron 20.0%
!!! TTGAAACTTTTAAAACGTAA+TGG + chr2_2:67850557-67850576 None:intergenic 20.0%
!! TGAAAACTAAAATAAGCATA+AGG - chr2_2:67850587-67850606 Msa0266930:intron 20.0%
!! GAAAACTAAAATAAGCATAA+GGG - chr2_2:67850588-67850607 Msa0266930:intron 20.0%
!! TTACTAAGCAGATAAAAAAA+AGG + chr2_2:67850632-67850651 None:intergenic 20.0%
! CAAAGTAATACTAGCAATAA+CGG - chr2_2:67845533-67845552 Msa0266930:three_prime_UTR 25.0%
!! ATAATTGTTGTTATGTTCAC+GGG - chr2_2:67846183-67846202 Msa0266930:CDS 25.0%
!! ATAGTCCTTTAAAAAACGAT+TGG - chr2_2:67846302-67846321 Msa0266930:intron 25.0%
!!! AAGTACCAATCGTTTTTTAA+AGG + chr2_2:67846310-67846329 None:intergenic 25.0%
! AATAGTTTAGACGATAAAAG+TGG - chr2_2:67846769-67846788 Msa0266930:intron 25.0%
!!! CAGAAAAGAGTTTTATTTTG+GGG + chr2_2:67847169-67847188 None:intergenic 25.0%
!!! GTCAGAAAAGAGTTTTATTT+TGG + chr2_2:67847171-67847190 None:intergenic 25.0%
!! TTGTTTATCTAAAGTGTAGT+TGG + chr2_2:67847417-67847436 None:intergenic 25.0%
!!! ATTTGCATAGTGTTCTTTTT+TGG - chr2_2:67847456-67847475 Msa0266930:intron 25.0%
!!! TTTGCATAGTGTTCTTTTTT+GGG - chr2_2:67847457-67847476 Msa0266930:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr2_2:67847560-67847579 None:intergenic 25.0%
!!! TAATCAATCTTTGTTTTAGC+AGG - chr2_2:67847882-67847901 Msa0266930:intron 25.0%
!!! AATCAATCTTTGTTTTAGCA+GGG - chr2_2:67847883-67847902 Msa0266930:intron 25.0%
!!! GAATGGGTTAATTATGTTTT+TGG - chr2_2:67848076-67848095 Msa0266930:intron 25.0%
! AAGTAAGGATTAAACTTACA+AGG + chr2_2:67848119-67848138 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr2_2:67848195-67848214 None:intergenic 25.0%
!! ACGACAAAAGTTTAAGATAT+AGG + chr2_2:67848339-67848358 None:intergenic 25.0%
!!! AGATGGGTTAATTATGTTTT+TGG + chr2_2:67848604-67848623 None:intergenic 25.0%
! TCGAATAACAAATCCATTAT+TGG - chr2_2:67848648-67848667 Msa0266930:intron 25.0%
!! ACTTGACTTTTATCCAATAA+TGG + chr2_2:67848664-67848683 None:intergenic 25.0%
!!! CACAGACACAAATTTTTTAT+AGG - chr2_2:67848686-67848705 Msa0266930:intron 25.0%
! TATAGGGTTAATGAAGTAAA+TGG - chr2_2:67848703-67848722 Msa0266930:intron 25.0%
! TACTTACCTGAATATTTATG+GGG + chr2_2:67848759-67848778 None:intergenic 25.0%
!! GCTAGCATAAAATTTTTACA+GGG + chr2_2:67848910-67848929 None:intergenic 25.0%
!! TGCTAGCATAAAATTTTTAC+AGG + chr2_2:67848911-67848930 None:intergenic 25.0%
!! CATTTTCCTTTAGCATTTTA+GGG + chr2_2:67848942-67848961 None:intergenic 25.0%
!! ACATTTTCCTTTAGCATTTT+AGG + chr2_2:67848943-67848962 None:intergenic 25.0%
!! AAAATGCACTTCTCATTTTA+AGG + chr2_2:67849106-67849125 None:intergenic 25.0%
! ATCCACATCTATATTAATAG+TGG - chr2_2:67849189-67849208 Msa0266930:intron 25.0%
! ATCCACTATTAATATAGATG+TGG + chr2_2:67849194-67849213 None:intergenic 25.0%
! ATTCAAAAAGAAGTTGTAGA+AGG - chr2_2:67849732-67849751 Msa0266930:intron 25.0%
! TACAATTGCATTCAATATCA+TGG + chr2_2:67849917-67849936 None:intergenic 25.0%
!!! TCTATCTTTAAAGTATCTTC+TGG + chr2_2:67850143-67850162 None:intergenic 25.0%
!! GAAGATACTTTAAAGATAGA+TGG - chr2_2:67850143-67850162 Msa0266930:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG - chr2_2:67850338-67850357 Msa0266930:intron 25.0%
! AATCTTTAAACGTTAAGTGA+TGG + chr2_2:67850391-67850410 None:intergenic 25.0%
! TCACTTAACGTTTAAAGATT+TGG - chr2_2:67850391-67850410 Msa0266930:intron 25.0%
! CACTTAACGTTTAAAGATTT+GGG - chr2_2:67850392-67850411 Msa0266930:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG + chr2_2:67850338-67850357 None:intergenic 25.0%
!!! GCTTATTTTAGTTTTCAAGT+TGG + chr2_2:67850584-67850603 None:intergenic 25.0%
!!! GTTTTTTGTTTCTTGTAATC+AGG - chr2_2:67850746-67850765 Msa0266930:intron 25.0%
! AAGAAACAACTCAATATATG+AGG + chr2_2:67851111-67851130 None:intergenic 25.0%
!! CGTTTATTTCTCTAAACTTT+AGG + chr2_2:67851255-67851274 None:intergenic 25.0%
!! TCATAAAACAGTGTACTTTT+AGG + chr2_2:67851280-67851299 None:intergenic 25.0%
!!! TCAATAAGATTTTCAAGCAA+TGG + chr2_2:67851470-67851489 None:intergenic 25.0%
CGTTATTGCTAGTATTACTT+TGG + chr2_2:67845535-67845554 None:intergenic 30.0%
! TTTAATAAATGAGGTGTCTG+AGG - chr2_2:67846139-67846158 Msa0266930:CDS 30.0%
! TTACAACGACGATCATTTTA+AGG + chr2_2:67846465-67846484 None:intergenic 30.0%
CAAGCATAGATCAAATGAAT+TGG + chr2_2:67846501-67846520 None:intergenic 30.0%
TTTGATCTATGCTTGATTGT+TGG - chr2_2:67846506-67846525 Msa0266930:intron 30.0%
TTGATCTATGCTTGATTGTT+GGG - chr2_2:67846507-67846526 Msa0266930:intron 30.0%
! AATAAATGTACGTTTTCTGC+AGG + chr2_2:67846670-67846689 None:intergenic 30.0%
CATTTATTTACGTTTCGTGT+TGG - chr2_2:67846682-67846701 Msa0266930:intron 30.0%
!! ACATTTGTTGGCTTTAAAGA+GGG + chr2_2:67846727-67846746 None:intergenic 30.0%
!! TACATTTGTTGGCTTTAAAG+AGG + chr2_2:67846728-67846747 None:intergenic 30.0%
CAAACATCAGATACATTTGT+TGG + chr2_2:67846739-67846758 None:intergenic 30.0%
CAAATGTATCTGATGTTTGT+TGG - chr2_2:67846740-67846759 Msa0266930:intron 30.0%
ACTAACAAAGTCTGTATTCA+GGG + chr2_2:67846995-67847014 None:intergenic 30.0%
TCAGAGACTAAAGTGATTAA+TGG + chr2_2:67847042-67847061 None:intergenic 30.0%
! AATCACTTTAGTCTCTGAAA+TGG - chr2_2:67847044-67847063 Msa0266930:intron 30.0%
CACAATGCATAATATATGCA+AGG - chr2_2:67847298-67847317 Msa0266930:intron 30.0%
TGCATAATATATGCAAGGTA+TGG - chr2_2:67847303-67847322 Msa0266930:intron 30.0%
GCATAATATATGCAAGGTAT+GGG - chr2_2:67847304-67847323 Msa0266930:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr2_2:67847976-67847995 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr2_2:67847975-67847994 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr2_2:67847561-67847580 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr2_2:67847820-67847839 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr2_2:67847975-67847994 Msa0266930:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr2_2:67847976-67847995 Msa0266930:intron 30.0%
! TTGGGATTTTGAATTCTCTT+GGG + chr2_2:67848037-67848056 None:intergenic 30.0%
!! TTTGGGATTTTGAATTCTCT+TGG + chr2_2:67848038-67848057 None:intergenic 30.0%
! AGATTGAAGGTGAATCTTTT+GGG + chr2_2:67848055-67848074 None:intergenic 30.0%
GTGTTAAGAACGTTATTGAA+AGG - chr2_2:67848260-67848279 Msa0266930:intron 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG + chr2_2:67848287-67848306 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG + chr2_2:67848422-67848441 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr2_2:67848561-67848580 Msa0266930:intron 30.0%
TTTATGGTCTAATTCGAGAT+GGG + chr2_2:67848620-67848639 None:intergenic 30.0%
! TTATTCGAGCTTGTTCTTTA+TGG + chr2_2:67848636-67848655 None:intergenic 30.0%
!! TGTTGATGGAAAATTTTGCA+GGG + chr2_2:67848879-67848898 None:intergenic 30.0%
!! ATGTTGATGGAAAATTTTGC+AGG + chr2_2:67848880-67848899 None:intergenic 30.0%
! ATTATCTTTGAGTAGCTTTG+AGG - chr2_2:67849361-67849380 Msa0266930:intron 30.0%
! AATTTTTACACCTTTAACCC+TGG + chr2_2:67849540-67849559 None:intergenic 30.0%
TATTTGCACACAATGTTGTA+TGG - chr2_2:67849596-67849615 Msa0266930:intron 30.0%
!!! TGTTTTAGGGATTTGTTCAT+TGG - chr2_2:67849631-67849650 Msa0266930:intron 30.0%
TAATATGAAAAATGTGGTGG+TGG - chr2_2:67849668-67849687 Msa0266930:intron 30.0%
AATATGAAAAATGTGGTGGT+GGG - chr2_2:67849669-67849688 Msa0266930:intron 30.0%
AAGGACTATAGTTACTCTAT+CGG + chr2_2:67850050-67850069 None:intergenic 30.0%
! ATGTAAATTTGAGACAGTCA+AGG + chr2_2:67850069-67850088 None:intergenic 30.0%
!!! GTATCTTCTGGTTGTTATTT+TGG + chr2_2:67850131-67850150 None:intergenic 30.0%
! TTAAACGTTAAGTGATGGAA+AGG + chr2_2:67850386-67850405 None:intergenic 30.0%
CATAGTAGACAATATGTTGA+TGG - chr2_2:67850717-67850736 Msa0266930:intron 30.0%
!! TTTTGTTTCTTGTAATCAGG+TGG - chr2_2:67850749-67850768 Msa0266930:intron 30.0%
! TTTGTTTCTTGTAATCAGGT+GGG - chr2_2:67850750-67850769 Msa0266930:intron 30.0%
CATATGTTGTGGGAAATAAT+TGG + chr2_2:67850972-67850991 None:intergenic 30.0%
ACATTAGTGATGGTTTCTTA+TGG - chr2_2:67851003-67851022 Msa0266930:CDS 30.0%
AGTCAGTCTATCAAAATTGT+TGG - chr2_2:67851071-67851090 Msa0266930:CDS 30.0%
CTGATCATCATCCAATTATT+CGG - chr2_2:67851165-67851184 Msa0266930:CDS 30.0%
AGCAATAACGGTAACAGTAA+CGG - chr2_2:67845545-67845564 Msa0266930:three_prime_UTR 35.0%
! GTAACAGTAACGGTTTTACT+TGG - chr2_2:67845555-67845574 Msa0266930:three_prime_UTR 35.0%
!!! CATTATTTTGAGGATGTGAG+TGG - chr2_2:67845818-67845837 Msa0266930:three_prime_UTR 35.0%
!! TGAATGCTAAGGAGTATCAT+AGG - chr2_2:67845972-67845991 Msa0266930:three_prime_UTR 35.0%
TGATCTATGCTTGATTGTTG+GGG - chr2_2:67846508-67846527 Msa0266930:intron 35.0%
TATTTACGTTTCGTGTTGGA+TGG - chr2_2:67846686-67846705 Msa0266930:intron 35.0%
ATTTACGTTTCGTGTTGGAT+GGG - chr2_2:67846687-67846706 Msa0266930:intron 35.0%
TGGAGATTCGAAGATAACTA+CGG - chr2_2:67846789-67846808 Msa0266930:intron 35.0%
TAGTCATTTAGTCCCAGAAT+AGG - chr2_2:67846888-67846907 Msa0266930:intron 35.0%
AGTAACAGAGTCTACATTCA+GGG + chr2_2:67846963-67846982 None:intergenic 35.0%
GACTAACAAAGTCTGTATTC+AGG + chr2_2:67846996-67847015 None:intergenic 35.0%
GATTAATGGAGTCTACATTC+AGG + chr2_2:67847028-67847047 None:intergenic 35.0%
ACCAACAAACTCAACATTCA+GGG - chr2_2:67847067-67847086 Msa0266930:intron 35.0%
TTTGCAATTTCTCTGCTTTC+AGG - chr2_2:67847095-67847114 Msa0266930:intron 35.0%
TTGCAATTTCTCTGCTTTCA+GGG - chr2_2:67847096-67847115 Msa0266930:intron 35.0%
! TGACTACTCATTTTCCATTC+AGG - chr2_2:67847126-67847145 Msa0266930:intron 35.0%
! TAGTCACTTTAGTTCCTGAA+TGG + chr2_2:67847143-67847162 None:intergenic 35.0%
AAATAGCGACCTTGTAAGTT+TGG - chr2_2:67847504-67847523 Msa0266930:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr2_2:67847960-67847979 Msa0266930:intron 35.0%
TTGGGAGGACAAAAAAAGAA+GGG + chr2_2:67848019-67848038 None:intergenic 35.0%
! GAGATTGAAGGTGAATCTTT+TGG + chr2_2:67848056-67848075 None:intergenic 35.0%
ATTCACCTTCAATCTCGAAT+GGG - chr2_2:67848060-67848079 Msa0266930:intron 35.0%
ATTAACCCATTCGAGATTGA+AGG + chr2_2:67848068-67848087 None:intergenic 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr2_2:67848577-67848596 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr2_2:67848576-67848595 None:intergenic 35.0%
! GAGTGCAGAAACTTTTTGTA+GGG + chr2_2:67848163-67848182 None:intergenic 35.0%
! TGAGTGCAGAAACTTTTTGT+AGG + chr2_2:67848164-67848183 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr2_2:67848576-67848595 Msa0266930:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr2_2:67848577-67848596 Msa0266930:intron 35.0%
CTTTATGGTCTAATTCGAGA+TGG + chr2_2:67848621-67848640 None:intergenic 35.0%
AATGGTCCCCATAAATATTC+AGG - chr2_2:67848721-67848740 Msa0266930:intron 35.0%
ACAGGGACTAAAAATGTTGA+TGG + chr2_2:67848893-67848912 None:intergenic 35.0%
TGCTAAAGGAAAATGTCACA+TGG - chr2_2:67848947-67848966 Msa0266930:intron 35.0%
CCAGATTGTGTGAATAATCT+TGG + chr2_2:67849217-67849236 None:intergenic 35.0%
CCAAGATTATTCACACAATC+TGG - chr2_2:67849214-67849233 Msa0266930:intron 35.0%
!! ATGAATTGATTTTAGAGGCC+AGG - chr2_2:67849519-67849538 Msa0266930:intron 35.0%
!! TGAATTGATTTTAGAGGCCA+GGG - chr2_2:67849520-67849539 Msa0266930:intron 35.0%
! ATATGAAAAATGTGGTGGTG+GGG - chr2_2:67849670-67849689 Msa0266930:intron 35.0%
CATCAAATTCTGACACAACA+TGG + chr2_2:67849712-67849731 None:intergenic 35.0%
ATCTTCCGTTCGTAATTTGA+TGG - chr2_2:67850104-67850123 Msa0266930:intron 35.0%
TTGGTCCATCAAATTACGAA+CGG + chr2_2:67850112-67850131 None:intergenic 35.0%
!! GTTTCAAGTTGGTTCAAAGT+TGG - chr2_2:67850349-67850368 Msa0266930:intron 35.0%
! TTCCAAAGTGAGTAACGTTT+TGG - chr2_2:67850528-67850547 Msa0266930:intron 35.0%
!! GTAGACAATATGTTGATGGT+TGG - chr2_2:67850721-67850740 Msa0266930:intron 35.0%
TTGTGGGAAATAATTGGACT+CGG + chr2_2:67850966-67850985 None:intergenic 35.0%
ATCCAATTATTCGGACTTAC+TGG - chr2_2:67851174-67851193 Msa0266930:CDS 35.0%
TCTTGGATCAAGATTTCATG+CGG + chr2_2:67851225-67851244 None:intergenic 35.0%
AAATCTTGATCCAAGAACCA+CGG - chr2_2:67851229-67851248 Msa0266930:CDS 35.0%
!!! TTTTTTTTCCCTCTAGAACC+AGG - chr2_2:67851346-67851365 Msa0266930:CDS 35.0%
!!! GGTTTTACTTGGTGTAGTAG+TGG - chr2_2:67845566-67845585 Msa0266930:three_prime_UTR 40.0%
AGTAGTGGTAGTACTACTAC+TGG - chr2_2:67845581-67845600 Msa0266930:three_prime_UTR 40.0%
AACTTCAAACATGTGAGGTG+TGG + chr2_2:67845788-67845807 None:intergenic 40.0%
! ACACCTCACATGTTTGAAGT+TGG - chr2_2:67845787-67845806 Msa0266930:three_prime_UTR 40.0%
! CACCTCACATGTTTGAAGTT+GGG - chr2_2:67845788-67845807 Msa0266930:three_prime_UTR 40.0%
! ACCTCACATGTTTGAAGTTG+GGG - chr2_2:67845789-67845808 Msa0266930:three_prime_UTR 40.0%
!! TATTTTGAGGATGTGAGTGG+TGG - chr2_2:67845821-67845840 Msa0266930:three_prime_UTR 40.0%
AAAGGGAAAGGAGGATATTG+TGG - chr2_2:67845869-67845888 Msa0266930:three_prime_UTR 40.0%
! GGAGTATCATAGGAGACATA+AGG - chr2_2:67845982-67846001 Msa0266930:three_prime_UTR 40.0%
GGTTTGTGAGATGCATTCAA+AGG - chr2_2:67846003-67846022 Msa0266930:exon 40.0%
!! TTCAAAGGCACCAAAAGTTG+TGG - chr2_2:67846018-67846037 Msa0266930:CDS 40.0%
! AAACCCAACACCACAACTTT+TGG + chr2_2:67846031-67846050 None:intergenic 40.0%
! AAAAGTTGTGGTGTTGGGTT+TGG - chr2_2:67846030-67846049 Msa0266930:CDS 40.0%
TTTACGTTTCGTGTTGGATG+GGG - chr2_2:67846688-67846707 Msa0266930:intron 40.0%
! GACGACTGTTTTCCTATTCT+GGG + chr2_2:67846903-67846922 None:intergenic 40.0%
! TGACGACTGTTTTCCTATTC+TGG + chr2_2:67846904-67846923 None:intergenic 40.0%
GAGTAACAGAGTCTACATTC+AGG + chr2_2:67846964-67846983 None:intergenic 40.0%
GACCAACAAACTCAACATTC+AGG - chr2_2:67847066-67847085 Msa0266930:intron 40.0%
TCCCTGAATGTTGAGTTTGT+TGG + chr2_2:67847071-67847090 None:intergenic 40.0%
AAGTAGGGACCAAACTTACA+AGG + chr2_2:67847516-67847535 None:intergenic 40.0%
CTTGGGAGGACAAAAAAAGA+AGG + chr2_2:67848020-67848039 None:intergenic 40.0%
! GGATTTTGAATTCTCTTGGG+AGG + chr2_2:67848034-67848053 None:intergenic 40.0%
GATTCACCTTCAATCTCGAA+TGG - chr2_2:67848059-67848078 Msa0266930:intron 40.0%
TTCGGTCCCTAAAATGCTAA+AGG - chr2_2:67848933-67848952 Msa0266930:intron 40.0%
!! ATTTTAGAGGCCAGGGTTAA+AGG - chr2_2:67849527-67849546 Msa0266930:intron 40.0%
AAGAAGTTGTAGAAGGAGAC+TGG - chr2_2:67849739-67849758 Msa0266930:intron 40.0%
ATTCCTCCCAACAGAATCAT+GGG + chr2_2:67849795-67849814 None:intergenic 40.0%
AATTCCTCCCAACAGAATCA+TGG + chr2_2:67849796-67849815 None:intergenic 40.0%
TGCAACAATCTTACCTTGTG+AGG + chr2_2:67849819-67849838 None:intergenic 40.0%
GTCCAAAACGTTACTCACTT+TGG + chr2_2:67850533-67850552 None:intergenic 40.0%
!! GACAATATGTTGATGGTTGG+TGG - chr2_2:67850724-67850743 Msa0266930:intron 40.0%
CTTTCTCTCTTCTGTCATCT+CGG - chr2_2:67850777-67850796 Msa0266930:intron 40.0%
TAATGCAGCACTGCATCTTA+CGG + chr2_2:67850834-67850853 None:intergenic 40.0%
!! AGAAAACCGAGCATCGATAA+TGG - chr2_2:67850868-67850887 Msa0266930:intron 40.0%
AATACGTCTTAGACAGAGAC+TGG - chr2_2:67850897-67850916 Msa0266930:intron 40.0%
GATCTCCTTGTAATCTTCCA+CGG + chr2_2:67850939-67850958 None:intergenic 40.0%
GGAAATAATTGGACTCGGAA+TGG + chr2_2:67850961-67850980 None:intergenic 40.0%
TCTGCGGAAACATATGTTGT+GGG + chr2_2:67850982-67851001 None:intergenic 40.0%
AACCATCACTAATGTGTCTG+CGG + chr2_2:67850998-67851017 None:intergenic 40.0%
AGTGATGGTTTCTTATGGCA+CGG - chr2_2:67851008-67851027 Msa0266930:CDS 40.0%
AGCCAGTAAGTCCGAATAAT+TGG + chr2_2:67851179-67851198 None:intergenic 40.0%
TTTCTCTAAACTTTAGGCCG+TGG + chr2_2:67851249-67851268 None:intergenic 40.0%
GTACTACTACTGGTACTGCA+TGG - chr2_2:67845591-67845610 Msa0266930:three_prime_UTR 45.0%
! GGCGGAGACTGAATTGTTTT+CGG + chr2_2:67845642-67845661 None:intergenic 45.0%
TAGCTAGACCTGCCTCATTA+CGG + chr2_2:67845670-67845689 None:intergenic 45.0%
AAACATGTGAGGTGTGGATC+AGG + chr2_2:67845782-67845801 None:intergenic 45.0%
TCCCCAACTTCAAACATGTG+AGG + chr2_2:67845793-67845812 None:intergenic 45.0%
! CATGTTTGAAGTTGGGGAAG+AGG - chr2_2:67845795-67845814 Msa0266930:three_prime_UTR 45.0%
!!! GGGGAAGAGGCATTATTTTG+AGG - chr2_2:67845808-67845827 Msa0266930:three_prime_UTR 45.0%
AAAGGAGGATATTGTGGTGG+TGG - chr2_2:67845875-67845894 Msa0266930:three_prime_UTR 45.0%
!! CGTGGCATTGATGAATGCTA+AGG - chr2_2:67845961-67845980 Msa0266930:three_prime_UTR 45.0%
GCACCAAAAGTTGTGGTGTT+GGG - chr2_2:67846025-67846044 Msa0266930:CDS 45.0%
GATTCTGTCAACAGTGTAGC+AGG - chr2_2:67846059-67846078 Msa0266930:CDS 45.0%
GCTTGTCAACTGAGTTAACG+AGG + chr2_2:67847279-67847298 None:intergenic 45.0%
CAAGGTATGGGTTCGAATCT+CGG - chr2_2:67847316-67847335 Msa0266930:intron 45.0%
AAGAGCTCCCATGATTCTGT+TGG - chr2_2:67849785-67849804 Msa0266930:intron 45.0%
AGAGCTCCCATGATTCTGTT+GGG - chr2_2:67849786-67849805 Msa0266930:intron 45.0%
! TGTCATCTCGGACTGATTCA+TGG - chr2_2:67850789-67850808 Msa0266930:intron 45.0%
! GACTGATTCATGGCTTTCAC+CGG - chr2_2:67850799-67850818 Msa0266930:intron 45.0%
GTCTGCGGAAACATATGTTG+TGG + chr2_2:67850983-67851002 None:intergenic 45.0%
TTCCGCAGACACATTAGTGA+TGG - chr2_2:67850993-67851012 Msa0266930:CDS 45.0%
TAGACTGACTGCGATGACTA+TGG + chr2_2:67851061-67851080 None:intergenic 45.0%
! TTATTCGGACTTACTGGCTG+TGG - chr2_2:67851180-67851199 Msa0266930:CDS 45.0%
AAACTTTAGGCCGTGGTTCT+TGG + chr2_2:67851242-67851261 None:intergenic 45.0%
!! CTAGCTAGCTGGACTAGTTA+CGG - chr2_2:67851372-67851391 Msa0266930:CDS 45.0%
!!! TAATTTTTTTTTAATAAATG+AGG - chr2_2:67846130-67846149 Msa0266930:CDS 5.0%
!! TTATATTTATGAAAAATAAA+AGG - chr2_2:67846860-67846879 Msa0266930:intron 5.0%
!! TATATTTATGAAAAATAAAA+GGG - chr2_2:67846861-67846880 Msa0266930:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr2_2:67847915-67847934 Msa0266930:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr2_2:67847916-67847935 Msa0266930:intron 5.0%
TAGACCTGCCTCATTACGGT+TGG + chr2_2:67845666-67845685 None:intergenic 50.0%
ATGTACCTGCCTCAGAACGA+AGG - chr2_2:67845698-67845717 Msa0266930:three_prime_UTR 50.0%
! CGACAGTATCGGAGTGCATA+CGG - chr2_2:67845728-67845747 Msa0266930:three_prime_UTR 50.0%
TTTGAGGATGTGAGTGGTGG+TGG - chr2_2:67845824-67845843 Msa0266930:three_prime_UTR 50.0%
GGGAAAGGAGGATATTGTGG+TGG - chr2_2:67845872-67845891 Msa0266930:three_prime_UTR 50.0%
!! GAGGATATTGTGGTGGTGGT+GGG - chr2_2:67845879-67845898 Msa0266930:three_prime_UTR 50.0%
!! ATATTGTGGTGGTGGTGGGA+AGG - chr2_2:67845883-67845902 Msa0266930:three_prime_UTR 50.0%
! TGACAAGGTGTCAGGTGGAT+GGG - chr2_2:67845933-67845952 Msa0266930:three_prime_UTR 50.0%
GGCACCAAAAGTTGTGGTGT+TGG - chr2_2:67846024-67846043 Msa0266930:CDS 50.0%
CGATTAACGAAGCTGCTCAC+AGG + chr2_2:67847371-67847390 None:intergenic 50.0%
!! AAAAATGTGGTGGTGGGGAG+TGG - chr2_2:67849675-67849694 Msa0266930:intron 50.0%
AGTTGTAGAAGGAGACTGGC+AGG - chr2_2:67849743-67849762 Msa0266930:intron 50.0%
GTTGTAGAAGGAGACTGGCA+GGG - chr2_2:67849744-67849763 Msa0266930:intron 50.0%
GTTGGGAGGAATTCCTCACA+AGG - chr2_2:67849803-67849822 Msa0266930:intron 50.0%
!! ACCGAGCATCGATAATGGCT+AGG - chr2_2:67850873-67850892 Msa0266930:intron 50.0%
GCCTAGCCATTATCGATGCT+CGG + chr2_2:67850877-67850896 None:intergenic 50.0%
CCTTGTAATCTTCCACGGCA+TGG + chr2_2:67850934-67850953 None:intergenic 50.0%
CCATGCCGTGGAAGATTACA+AGG - chr2_2:67850931-67850950 Msa0266930:intron 50.0%
GTTTCTTATGGCACGGAGCT+TGG - chr2_2:67851015-67851034 Msa0266930:CDS 50.0%
TATGGCACGGAGCTTGGATA+CGG - chr2_2:67851021-67851040 Msa0266930:CDS 50.0%
!! GCTAGCATCCTGGTTCTAGA+GGG + chr2_2:67851357-67851376 None:intergenic 50.0%
!! AGCTAGCATCCTGGTTCTAG+AGG + chr2_2:67851358-67851377 None:intergenic 50.0%
ACCTGCCTCATTACGGTTGG+CGG + chr2_2:67845663-67845682 None:intergenic 55.0%
AAGGCGACGGACGACAGTAT+CGG - chr2_2:67845717-67845736 Msa0266930:three_prime_UTR 55.0%
! CAGTATCGGAGTGCATACGG+TGG - chr2_2:67845731-67845750 Msa0266930:three_prime_UTR 55.0%
TATCGGAGTGCATACGGTGG+AGG - chr2_2:67845734-67845753 Msa0266930:three_prime_UTR 55.0%
! CATACGGTGGAGGTGTGTCT+CGG - chr2_2:67845744-67845763 Msa0266930:three_prime_UTR 55.0%
! ATACGGTGGAGGTGTGTCTC+GGG - chr2_2:67845745-67845764 Msa0266930:three_prime_UTR 55.0%
!! ATGTGAGTGGTGGTGGTGGT+GGG - chr2_2:67845831-67845850 Msa0266930:three_prime_UTR 55.0%
GCTGGGGAGAAGAAAGGGAA+AGG - chr2_2:67845857-67845876 Msa0266930:three_prime_UTR 55.0%
GGGGAGAAGAAAGGGAAAGG+AGG - chr2_2:67845860-67845879 Msa0266930:three_prime_UTR 55.0%
!! GGAGGATATTGTGGTGGTGG+TGG - chr2_2:67845878-67845897 Msa0266930:three_prime_UTR 55.0%
GTGGTTATACGGCGGTGACA+AGG - chr2_2:67845918-67845937 Msa0266930:three_prime_UTR 55.0%
! GTGACAAGGTGTCAGGTGGA+TGG - chr2_2:67845932-67845951 Msa0266930:three_prime_UTR 55.0%
TCAGGTGGATGGGTGTAACG+TGG - chr2_2:67845943-67845962 Msa0266930:three_prime_UTR 55.0%
! GTGGTGGGGAGTGGTTCTTT+AGG - chr2_2:67849684-67849703 Msa0266930:intron 55.0%
GCTCCCATGATTCTGTTGGG+AGG - chr2_2:67849789-67849808 Msa0266930:intron 55.0%
CATCTTACGGAGAGGTCAGC+CGG + chr2_2:67850821-67850840 None:intergenic 55.0%
CAGCACTGCATCTTACGGAG+AGG + chr2_2:67850829-67850848 None:intergenic 55.0%
GAACCAGGATGCTAGCTAGC+TGG - chr2_2:67851361-67851380 Msa0266930:CDS 55.0%
AGTCCAGCTAGCTAGCATCC+TGG + chr2_2:67851367-67851386 None:intergenic 55.0%
TGCCTCATTACGGTTGGCGG+CGG + chr2_2:67845660-67845679 None:intergenic 60.0%
CTGCCTCAGAACGAAGGCGA+CGG - chr2_2:67845704-67845723 Msa0266930:three_prime_UTR 60.0%
! TACGGTGGAGGTGTGTCTCG+GGG - chr2_2:67845746-67845765 Msa0266930:three_prime_UTR 60.0%
!! GAGGATGTGAGTGGTGGTGG+TGG - chr2_2:67845827-67845846 Msa0266930:three_prime_UTR 60.0%
!! GATGTGAGTGGTGGTGGTGG+TGG - chr2_2:67845830-67845849 Msa0266930:three_prime_UTR 60.0%
! GGCTGGCTGGGGAGAAGAAA+GGG - chr2_2:67845852-67845871 Msa0266930:three_prime_UTR 60.0%
!! TTGTGGTGGTGGTGGGAAGG+CGG - chr2_2:67845886-67845905 Msa0266930:three_prime_UTR 60.0%
!! GGCGGTGGTGGGTGGTTATA+CGG - chr2_2:67845907-67845926 Msa0266930:three_prime_UTR 60.0%
!! GGTGGTGGGTGGTTATACGG+CGG - chr2_2:67845910-67845929 Msa0266930:three_prime_UTR 60.0%
! TACGGCGGTGACAAGGTGTC+AGG - chr2_2:67845925-67845944 Msa0266930:three_prime_UTR 60.0%
GCATTTGCAGCACCATGCCG+TGG - chr2_2:67850919-67850938 Msa0266930:intron 60.0%
CTCCGCCGCCAACCGTAATG+AGG - chr2_2:67845655-67845674 Msa0266930:three_prime_UTR 65.0%
GCCGCCAACCGTAATGAGGC+AGG - chr2_2:67845659-67845678 Msa0266930:three_prime_UTR 65.0%
!! CGTCGCCTTCGTTCTGAGGC+AGG + chr2_2:67845706-67845725 None:intergenic 65.0%
CGTCCGTCGCCTTCGTTCTG+AGG + chr2_2:67845710-67845729 None:intergenic 65.0%
!! GGGCTGGCTGGGGAGAAGAA+AGG - chr2_2:67845851-67845870 Msa0266930:three_prime_UTR 65.0%
! GGCGGTGACAAGGTGTCAGG+TGG - chr2_2:67845928-67845947 Msa0266930:three_prime_UTR 65.0%
!! GAGTGGTGGTGGTGGTGGGC+TGG - chr2_2:67845835-67845854 Msa0266930:three_prime_UTR 70.0%
!! GTGGTGGTGGTGGGCTGGCT+GGG - chr2_2:67845840-67845859 Msa0266930:three_prime_UTR 70.0%
!! TGGTGGTGGTGGGCTGGCTG+GGG - chr2_2:67845841-67845860 Msa0266930:three_prime_UTR 70.0%
!! TGGTGGTGGTGGGAAGGCGG+CGG - chr2_2:67845889-67845908 Msa0266930:three_prime_UTR 70.0%
!! GGTGGTGGTGGTGGGCTGGC+TGG - chr2_2:67845839-67845858 Msa0266930:three_prime_UTR 75.0%
!! TGGTGGTGGGAAGGCGGCGG+TGG - chr2_2:67845892-67845911 Msa0266930:three_prime_UTR 75.0%
TGGTGGGAAGGCGGCGGTGG+TGG - chr2_2:67845895-67845914 Msa0266930:three_prime_UTR 75.0%
GGTGGGAAGGCGGCGGTGGT+GGG - chr2_2:67845896-67845915 Msa0266930:three_prime_UTR 75.0%
!!! GGGAAGGCGGCGGTGGTGGG+TGG - chr2_2:67845899-67845918 Msa0266930:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 67845491 67851528 67845491 ID=Msa0266930;Name=Msa0266930
chr2_2 mRNA 67845491 67851528 67845491 ID=Msa0266930-mRNA-1;Parent=Msa0266930;Name=Msa0266930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.66|1|1|1|3|519|316
chr2_2 exon 67845491 67846251 67845491 ID=Msa0266930-mRNA-1:exon:21585;Parent=Msa0266930-mRNA-1
chr2_2 exon 67847195 67847313 67847195 ID=Msa0266930-mRNA-1:exon:21584;Parent=Msa0266930-mRNA-1
chr2_2 exon 67850939 67851528 67850939 ID=Msa0266930-mRNA-1:exon:21583;Parent=Msa0266930-mRNA-1
chr2_2 CDS 67850939 67851528 67850939 ID=Msa0266930-mRNA-1:cds;Parent=Msa0266930-mRNA-1
chr2_2 CDS 67847195 67847313 67847195 ID=Msa0266930-mRNA-1:cds;Parent=Msa0266930-mRNA-1
chr2_2 CDS 67846010 67846251 67846010 ID=Msa0266930-mRNA-1:cds;Parent=Msa0266930-mRNA-1
chr2_2 three_prime_UTR 67845491 67846009 67845491 ID=Msa0266930-mRNA-1:three_prime_utr;Parent=Msa0266930-mRNA-1
Gene Sequence

>Msa0266930

ATGGACTTTGGAGGGAACATGTTCTGTCTCAACAACAGAGACCAAAGTAATACTAGCAATAACGGTAACAGTAACGGTTTTACTTGGTGTAGTAGTGGTAGTACTACTACTGGTACTGCATGGAACATGAATACTTTTAATGTTAATGCCGAAAACAATTCAGTCTCCGCCGCCAACCGTAATGAGGCAGGTCTAGCTAACGCGCTTATGTACCTGCCTCAGAACGAAGGCGACGGACGACAGTATCGGAGTGCATACGGTGGAGGTGTGTCTCGGGGTCACATGATGCCTGATCCACACCTCACATGTTTGAAGTTGGGGAAGAGGCATTATTTTGAGGATGTGAGTGGTGGTGGTGGTGGGCTGGCTGGGGAGAAGAAAGGGAAAGGAGGATATTGTGGTGGTGGTGGGAAGGCGGCGGTGGTGGGTGGTTATACGGCGGTGACAAGGTGTCAGGTGGATGGGTGTAACGTGGCATTGATGAATGCTAAGGAGTATCATAGGAGACATAAGGTTTGTGAGATGCATTCAAAGGCACCAAAAGTTGTGGTGTTGGGTTTGGAGCAAAGATTCTGTCAACAGTGTAGCAGGTTCCATGTTGTGTCAGAATTTGATGATTCAAAAAGAAGTTGTAGAAGGAGACTGGCAGGGCACAATGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGGGAGGAATTCCTCACAAGGTGGGTGTGCTTTCTCTCTTCTGTCATCTCGGACTGATTCATGGCTTTCACCGGCTGACCTCTCCGTAAGATGCAGTGCTGCATTAAGCGAATTGATAGCAGAAAACCGAGCATCGATAATGGCTAGGCAATACGTCTTAGACAGAGACTGGCATTTGCAGCACCATGCCGTGGAAGATTACAAGGAGATCCATTCCGAGTCCAATTATTTCCCACAACATATGTTTCCGCAGACACATTAG
Protein sequence

>Msa0266930

MDFGGNMFCLNNRDQSNTSNNGNSNGFTWCSSGSTTTGTAWNMNTFNVNAENNSVSAANRNEAGLANALMYLPQNEGDGRQYRSAYGGGVSRGHMMPDPHLTCLKLGKRHYFEDVSGGGGGLAGEKKGKGGYCGGGGKAAVVGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHDSVGRNSSQGGCAFSLLSSRTDSWLSPADLSVRCSAALSELIAENRASIMARQYVLDRDWHLQHHAVEDYKEIHSESNYFPQHMFPQTH*