Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176160 | sp|U3MMQ4|TAC1_PRUPE | 38.760 | 258 | 119 | 9 | 1 | 232 | 24 | 268 | 2.74e-42 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176160 | A0A396GE58 | 96.825 | 252 | 8 | 0 | 1 | 252 | 1 | 252 | 1.51e-177 | 497 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1176160 | 0.808451 | 3.076606e-50 | -8.615850e-47 |
| Msa0005050 | Msa1176160 | 0.852008 | 6.118971e-61 | -8.615850e-47 |
| Msa0010560 | Msa1176160 | 0.800534 | 1.377842e-48 | -8.615850e-47 |
| Msa0016120 | Msa1176160 | 0.834924 | 2.262411e-56 | -8.615850e-47 |
| Msa0017510 | Msa1176160 | 0.816165 | 6.364256e-52 | -8.615850e-47 |
| Msa0022640 | Msa1176160 | 0.835426 | 1.689835e-56 | -8.615850e-47 |
| Msa0032840 | Msa1176160 | -0.805545 | 1.267781e-49 | -8.615850e-47 |
| Msa0036430 | Msa1176160 | 0.813064 | 3.092568e-51 | -8.615850e-47 |
| Msa0043210 | Msa1176160 | 0.819659 | 1.033891e-52 | -8.615850e-47 |
| Msa0048200 | Msa1176160 | 0.807090 | 5.991342e-50 | -8.615850e-47 |
| Msa0050040 | Msa1176160 | 0.846247 | 2.449352e-59 | -8.615850e-47 |
| Msa0053110 | Msa1176160 | 0.853993 | 1.654702e-61 | -8.615850e-47 |
| Msa0072810 | Msa1176160 | 0.841251 | 5.322504e-58 | -8.615850e-47 |
| Msa0079770 | Msa1176160 | 0.825250 | 5.194480e-54 | -8.615850e-47 |
| Msa0080990 | Msa1176160 | 0.818626 | 1.776599e-52 | -8.615850e-47 |
| Msa0081010 | Msa1176160 | 0.808024 | 3.794283e-50 | -8.615850e-47 |
| Msa0084000 | Msa1176160 | 0.833479 | 5.209701e-56 | -8.615850e-47 |
| Msa0084500 | Msa1176160 | 0.822358 | 2.472432e-53 | -8.615850e-47 |
| Msa0098440 | Msa1176160 | 0.848228 | 7.006622e-60 | -8.615850e-47 |
| Msa0101690 | Msa1176160 | 0.803417 | 3.521422e-49 | -8.615850e-47 |
| Msa0102990 | Msa1176160 | 0.846366 | 2.271749e-59 | -8.615850e-47 |
| Msa0103000 | Msa1176160 | 0.862432 | 5.087885e-64 | -8.615850e-47 |
| Msa0106790 | Msa1176160 | 0.822387 | 2.434691e-53 | -8.615850e-47 |
| Msa0109880 | Msa1176160 | 0.826341 | 2.861483e-54 | -8.615850e-47 |
| Msa0110970 | Msa1176160 | 0.830431 | 2.947627e-55 | -8.615850e-47 |
| Msa0114540 | Msa1176160 | -0.808824 | 2.561555e-50 | -8.615850e-47 |
| Msa0118380 | Msa1176160 | 0.805009 | 1.641521e-49 | -8.615850e-47 |
| Msa0118400 | Msa1176160 | 0.837310 | 5.606224e-57 | -8.615850e-47 |
| Msa0614140 | Msa1176160 | 0.807200 | 5.677040e-50 | -8.615850e-47 |
| Msa0625890 | Msa1176160 | 0.820625 | 6.212437e-53 | -8.615850e-47 |
| Msa0634270 | Msa1176160 | 0.809086 | 2.250840e-50 | -8.615850e-47 |
| Msa0641250 | Msa1176160 | 0.834931 | 2.252442e-56 | -8.615850e-47 |
| Msa0641620 | Msa1176160 | 0.840642 | 7.689852e-58 | -8.615850e-47 |
| Msa0645050 | Msa1176160 | 0.802344 | 5.866739e-49 | -8.615850e-47 |
| Msa0663590 | Msa1176160 | 0.817873 | 2.630830e-52 | -8.615850e-47 |
| Msa0663680 | Msa1176160 | 0.823574 | 1.287048e-53 | -8.615850e-47 |
| Msa0666210 | Msa1176160 | 0.829424 | 5.189200e-55 | -8.615850e-47 |
| Msa0669840 | Msa1176160 | 0.834608 | 2.715791e-56 | -8.615850e-47 |
| Msa0678890 | Msa1176160 | 0.810240 | 1.271749e-50 | -8.615850e-47 |
| Msa0680150 | Msa1176160 | 0.866020 | 3.867165e-65 | -8.615850e-47 |
| Msa0688500 | Msa1176160 | 0.828880 | 7.030558e-55 | -8.615850e-47 |
| Msa0688770 | Msa1176160 | 0.801808 | 7.561854e-49 | -8.615850e-47 |
| Msa0691160 | Msa1176160 | 0.816055 | 6.735935e-52 | -8.615850e-47 |
| Msa0707220 | Msa1176160 | 0.810463 | 1.138271e-50 | -8.615850e-47 |
| Msa0716760 | Msa1176160 | 0.809074 | 2.264893e-50 | -8.615850e-47 |
| Msa0720040 | Msa1176160 | 0.827807 | 1.275497e-54 | -8.615850e-47 |
| Msa0723150 | Msa1176160 | 0.805303 | 1.424818e-49 | -8.615850e-47 |
| Msa0737190 | Msa1176160 | 0.836865 | 7.281771e-57 | -8.615850e-47 |
| Msa0737320 | Msa1176160 | 0.814056 | 1.871005e-51 | -8.615850e-47 |
| Msa0739430 | Msa1176160 | 0.807273 | 5.477518e-50 | -8.615850e-47 |
| Msa0739580 | Msa1176160 | 0.836969 | 6.850903e-57 | -8.615850e-47 |
| Msa0747780 | Msa1176160 | 0.860154 | 2.516852e-63 | -8.615850e-47 |
| Msa0748000 | Msa1176160 | 0.818262 | 2.148491e-52 | -8.615850e-47 |
| Msa0754030 | Msa1176160 | 0.865350 | 6.293057e-65 | -8.615850e-47 |
| Msa0761580 | Msa1176160 | 0.843658 | 1.223635e-58 | -8.615850e-47 |
| Msa0764820 | Msa1176160 | 0.811534 | 6.671267e-51 | -8.615850e-47 |
| Msa0770290 | Msa1176160 | 0.810020 | 1.418626e-50 | -8.615850e-47 |
| Msa0778930 | Msa1176160 | 0.857498 | 1.566466e-62 | -8.615850e-47 |
| Msa0782360 | Msa1176160 | 0.813396 | 2.614696e-51 | -8.615850e-47 |
| Msa0807110 | Msa1176160 | 0.861304 | 1.127042e-63 | -8.615850e-47 |
| Msa0816450 | Msa1176160 | 0.858265 | 9.278845e-63 | -8.615850e-47 |
| Msa0828830 | Msa1176160 | 0.812968 | 3.246086e-51 | -8.615850e-47 |
| Msa0833040 | Msa1176160 | 0.865998 | 3.931636e-65 | -8.615850e-47 |
| Msa0127440 | Msa1176160 | 0.823670 | 1.222260e-53 | -8.615850e-47 |
| Msa0130010 | Msa1176160 | 0.834498 | 2.895589e-56 | -8.615850e-47 |
| Msa0130160 | Msa1176160 | 0.826517 | 2.597839e-54 | -8.615850e-47 |
| Msa0130570 | Msa1176160 | 0.816184 | 6.303412e-52 | -8.615850e-47 |
| Msa0137150 | Msa1176160 | 0.819614 | 1.058804e-52 | -8.615850e-47 |
| Msa0141600 | Msa1176160 | 0.826158 | 3.162661e-54 | -8.615850e-47 |
| Msa0147560 | Msa1176160 | 0.878878 | 1.966583e-69 | -8.615850e-47 |
| Msa0147600 | Msa1176160 | 0.817517 | 3.165598e-52 | -8.615850e-47 |
| Msa0148100 | Msa1176160 | 0.804814 | 1.803048e-49 | -8.615850e-47 |
| Msa0153420 | Msa1176160 | 0.803595 | 3.233846e-49 | -8.615850e-47 |
| Msa0156250 | Msa1176160 | 0.839999 | 1.132346e-57 | -8.615850e-47 |
| Msa0157290 | Msa1176160 | 0.816744 | 4.722325e-52 | -8.615850e-47 |
| Msa0161680 | Msa1176160 | 0.838789 | 2.334623e-57 | -8.615850e-47 |
| Msa0176470 | Msa1176160 | 0.806121 | 9.592294e-50 | -8.615850e-47 |
| Msa0197230 | Msa1176160 | 0.836560 | 8.711670e-57 | -8.615850e-47 |
| Msa0203030 | Msa1176160 | 0.831654 | 1.477164e-55 | -8.615850e-47 |
| Msa0203160 | Msa1176160 | 0.811540 | 6.651550e-51 | -8.615850e-47 |
| Msa0212150 | Msa1176160 | 0.822900 | 1.849847e-53 | -8.615850e-47 |
| Msa0218780 | Msa1176160 | 0.810099 | 1.364027e-50 | -8.615850e-47 |
| Msa0219190 | Msa1176160 | 0.866122 | 3.592035e-65 | -8.615850e-47 |
| Msa0221290 | Msa1176160 | 0.802413 | 5.676904e-49 | -8.615850e-47 |
| Msa0236110 | Msa1176160 | 0.801171 | 1.021265e-48 | -8.615850e-47 |
| Msa0370600 | Msa1176160 | 0.824959 | 6.083699e-54 | -8.615850e-47 |
| Msa0371540 | Msa1176160 | 0.860727 | 1.688303e-63 | -8.615850e-47 |
| Msa0378500 | Msa1176160 | 0.806721 | 7.167410e-50 | -8.615850e-47 |
| Msa0392420 | Msa1176160 | 0.814338 | 1.620985e-51 | -8.615850e-47 |
| Msa0392460 | Msa1176160 | 0.810939 | 8.984138e-51 | -8.615850e-47 |
| Msa0392490 | Msa1176160 | 0.804493 | 2.103721e-49 | -8.615850e-47 |
| Msa0402820 | Msa1176160 | 0.809724 | 1.642698e-50 | -8.615850e-47 |
| Msa0406000 | Msa1176160 | 0.825862 | 3.719675e-54 | -8.615850e-47 |
| Msa0408630 | Msa1176160 | 0.849592 | 2.929479e-60 | -8.615850e-47 |
| Msa0408640 | Msa1176160 | 0.843315 | 1.511515e-58 | -8.615850e-47 |
| Msa0413930 | Msa1176160 | 0.806564 | 7.738266e-50 | -8.615850e-47 |
| Msa0418200 | Msa1176160 | 0.840625 | 7.766916e-58 | -8.615850e-47 |
| Msa0419970 | Msa1176160 | 0.825464 | 4.621375e-54 | -8.615850e-47 |
| Msa0436460 | Msa1176160 | 0.800272 | 1.557647e-48 | -8.615850e-47 |
| Msa0436500 | Msa1176160 | 0.863692 | 2.076556e-64 | -8.615850e-47 |
| Msa0451400 | Msa1176160 | 0.847739 | 9.555831e-60 | -8.615850e-47 |
| Msa0453520 | Msa1176160 | 0.834429 | 3.013702e-56 | -8.615850e-47 |
| Msa0461720 | Msa1176160 | 0.837476 | 5.083227e-57 | -8.615850e-47 |
| Msa0464540 | Msa1176160 | 0.833680 | 4.640395e-56 | -8.615850e-47 |
| Msa0466060 | Msa1176160 | 0.829762 | 4.292477e-55 | -8.615850e-47 |
| Msa0999300 | Msa1176160 | 0.835461 | 1.655528e-56 | -8.615850e-47 |
| Msa1001890 | Msa1176160 | 0.810205 | 1.294014e-50 | -8.615850e-47 |
| Msa1006830 | Msa1176160 | 0.811644 | 6.316171e-51 | -8.615850e-47 |
| Msa1006860 | Msa1176160 | 0.803491 | 3.399369e-49 | -8.615850e-47 |
| Msa1009000 | Msa1176160 | 0.813387 | 2.626026e-51 | -8.615850e-47 |
| Msa1014270 | Msa1176160 | 0.842563 | 2.396171e-58 | -8.615850e-47 |
| Msa1016600 | Msa1176160 | 0.818244 | 2.169358e-52 | -8.615850e-47 |
| Msa1037770 | Msa1176160 | 0.811752 | 5.982299e-51 | -8.615850e-47 |
| Msa1037890 | Msa1176160 | 0.807762 | 4.313342e-50 | -8.615850e-47 |
| Msa1037900 | Msa1176160 | 0.853406 | 2.440356e-61 | -8.615850e-47 |
| Msa1037910 | Msa1176160 | 0.843882 | 1.066139e-58 | -8.615850e-47 |
| Msa1037920 | Msa1176160 | 0.802003 | 6.893249e-49 | -8.615850e-47 |
| Msa1041530 | Msa1176160 | 0.875724 | 2.459385e-68 | -8.615850e-47 |
| Msa1042670 | Msa1176160 | 0.820711 | 5.935574e-53 | -8.615850e-47 |
| Msa1049010 | Msa1176160 | 0.813596 | 2.362789e-51 | -8.615850e-47 |
| Msa1055260 | Msa1176160 | 0.838872 | 2.221727e-57 | -8.615850e-47 |
| Msa1055280 | Msa1176160 | 0.840953 | 6.374221e-58 | -8.615850e-47 |
| Msa1061500 | Msa1176160 | 0.816565 | 5.178509e-52 | -8.615850e-47 |
| Msa1070420 | Msa1176160 | 0.843797 | 1.123126e-58 | -8.615850e-47 |
| Msa1077180 | Msa1176160 | 0.829038 | 6.436159e-55 | -8.615850e-47 |
| Msa1078710 | Msa1176160 | 0.801996 | 6.918285e-49 | -8.615850e-47 |
| Msa1081570 | Msa1176160 | 0.887044 | 2.015394e-72 | -8.615850e-47 |
| Msa1096210 | Msa1176160 | 0.805142 | 1.539994e-49 | -8.615850e-47 |
| Msa1106810 | Msa1176160 | 0.804605 | 1.993374e-49 | -8.615850e-47 |
| Msa0238890 | Msa1176160 | 0.832157 | 1.109588e-55 | -8.615850e-47 |
| Msa0252770 | Msa1176160 | 0.832410 | 9.602496e-56 | -8.615850e-47 |
| Msa0257680 | Msa1176160 | 0.826326 | 2.884637e-54 | -8.615850e-47 |
| Msa0266930 | Msa1176160 | 0.805183 | 1.509484e-49 | -8.615850e-47 |
| Msa0289890 | Msa1176160 | 0.816190 | 6.282793e-52 | -8.615850e-47 |
| Msa0289920 | Msa1176160 | 0.802333 | 5.896862e-49 | -8.615850e-47 |
| Msa0298240 | Msa1176160 | 0.855627 | 5.557613e-62 | -8.615850e-47 |
| Msa0301980 | Msa1176160 | 0.805744 | 1.151440e-49 | -8.615850e-47 |
| Msa0306120 | Msa1176160 | 0.834113 | 3.615665e-56 | -8.615850e-47 |
| Msa0308830 | Msa1176160 | 0.809464 | 1.867823e-50 | -8.615850e-47 |
| Msa0314630 | Msa1176160 | 0.812240 | 4.683760e-51 | -8.615850e-47 |
| Msa0322830 | Msa1176160 | 0.801616 | 8.277881e-49 | -8.615850e-47 |
| Msa0323610 | Msa1176160 | 0.834695 | 2.582349e-56 | -8.615850e-47 |
| Msa0329620 | Msa1176160 | 0.855209 | 7.355959e-62 | -8.615850e-47 |
| Msa0335270 | Msa1176160 | 0.824653 | 7.182487e-54 | -8.615850e-47 |
| Msa0337850 | Msa1176160 | 0.826562 | 2.533956e-54 | -8.615850e-47 |
| Msa0340480 | Msa1176160 | 0.802233 | 6.181412e-49 | -8.615850e-47 |
| Msa0359250 | Msa1176160 | 0.848875 | 4.637188e-60 | -8.615850e-47 |
| Msa0361250 | Msa1176160 | 0.812426 | 4.265012e-51 | -8.615850e-47 |
| Msa0361260 | Msa1176160 | 0.839642 | 1.402211e-57 | -8.615850e-47 |
| Msa0362780 | Msa1176160 | 0.802796 | 4.732354e-49 | -8.615850e-47 |
| Msa1123880 | Msa1176160 | 0.860467 | 2.024349e-63 | -8.615850e-47 |
| Msa1127140 | Msa1176160 | 0.891917 | 2.563255e-74 | -8.615850e-47 |
| Msa1127950 | Msa1176160 | 0.825861 | 3.720338e-54 | -8.615850e-47 |
| Msa1129960 | Msa1176160 | 0.856538 | 3.006634e-62 | -8.615850e-47 |
| Msa1129970 | Msa1176160 | 0.841340 | 5.043518e-58 | -8.615850e-47 |
| Msa1130010 | Msa1176160 | 0.813087 | 3.057003e-51 | -8.615850e-47 |
| Msa1133710 | Msa1176160 | 0.802622 | 5.141487e-49 | -8.615850e-47 |
| Msa1134110 | Msa1176160 | 0.804352 | 2.251294e-49 | -8.615850e-47 |
| Msa1136230 | Msa1176160 | 0.809357 | 1.969409e-50 | -8.615850e-47 |
| Msa1145020 | Msa1176160 | 0.823675 | 1.219043e-53 | -8.615850e-47 |
| Msa1166400 | Msa1176160 | 0.882452 | 1.029611e-70 | -8.615850e-47 |
| Msa1169990 | Msa1176160 | 0.822795 | 1.956954e-53 | -8.615850e-47 |
| Msa1176160 | Msa1178160 | 0.827977 | 1.160934e-54 | -8.615850e-47 |
| Msa1176160 | Msa1200440 | 0.831657 | 1.474449e-55 | -8.615850e-47 |
| Msa1176160 | Msa1201110 | 0.816448 | 5.500411e-52 | -8.615850e-47 |
| Msa1176160 | Msa1201160 | 0.834195 | 3.449769e-56 | -8.615850e-47 |
| Msa1176160 | Msa1204880 | 0.820994 | 5.110496e-53 | -8.615850e-47 |
| Msa1176160 | Msa1204910 | 0.833309 | 5.743615e-56 | -8.615850e-47 |
| Msa1176160 | Msa1227950 | 0.813036 | 3.136768e-51 | -8.615850e-47 |
| Msa1176160 | Msa1228190 | 0.825871 | 3.700173e-54 | -8.615850e-47 |
| Msa1176160 | Msa1228210 | 0.803085 | 4.124650e-49 | -8.615850e-47 |
| Msa1176160 | Msa1228610 | 0.849949 | 2.328359e-60 | -8.615850e-47 |
| Msa1176160 | Msa1228980 | 0.817238 | 3.658297e-52 | -8.615850e-47 |
| Msa1176160 | Msa1232730 | 0.819422 | 1.170976e-52 | -8.615850e-47 |
| Msa1176160 | Msa1233560 | 0.801007 | 1.102925e-48 | -8.615850e-47 |
| Msa1176160 | Msa1256500 | 0.843591 | 1.274969e-58 | -8.615850e-47 |
| Msa1176160 | Msa1271260 | 0.812531 | 4.045922e-51 | -8.615850e-47 |
| Msa1176160 | Msa1277400 | 0.934831 | 2.193810e-96 | -8.615850e-47 |
| Msa1176160 | Msa1285900 | 0.826868 | 2.142265e-54 | -8.615850e-47 |
| Msa1176160 | Msa1293770 | 0.819669 | 1.028400e-52 | -8.615850e-47 |
| Msa1176160 | Msa1294290 | 0.818287 | 2.120830e-52 | -8.615850e-47 |
| Msa1176160 | Msa1296800 | 0.845855 | 3.129949e-59 | -8.615850e-47 |
| Msa1176160 | Msa1300800 | 0.803737 | 3.021532e-49 | -8.615850e-47 |
| Msa1176160 | Msa1305310 | 0.929057 | 1.198290e-92 | -8.615850e-47 |
| Msa1176160 | Msa1305510 | 0.830926 | 2.230337e-55 | -8.615850e-47 |
| Msa1176160 | Msa1305750 | 0.846622 | 1.935092e-59 | -8.615850e-47 |
| Msa1176160 | Msa1307150 | 0.838571 | 2.657639e-57 | -8.615850e-47 |
| Msa1176160 | Msa1307190 | 0.986033 | 1.868183e-165 | -8.615850e-47 |
| Msa1176160 | Msa1336780 | 0.807045 | 6.122302e-50 | -8.615850e-47 |
| Msa1176160 | Msa1351760 | 0.828275 | 9.843405e-55 | -8.615850e-47 |
| Msa1176160 | Msa1355400 | 0.835652 | 1.481243e-56 | -8.615850e-47 |
| Msa1176160 | Msa1356990 | 0.817169 | 3.790793e-52 | -8.615850e-47 |
| Msa1176160 | Msa1374550 | 0.819441 | 1.159751e-52 | -8.615850e-47 |
| Msa1176160 | Msa1379970 | 0.846343 | 2.304739e-59 | -8.615850e-47 |
| Msa1176160 | Msa1379990 | 0.805624 | 1.220090e-49 | -8.615850e-47 |
| Msa1176160 | Msa1394890 | 0.807212 | 5.644267e-50 | -8.615850e-47 |
| Msa1176160 | Msa1406780 | 0.844969 | 5.439820e-59 | -8.615850e-47 |
| Msa1176160 | Msa1408870 | 0.860980 | 1.414819e-63 | -8.615850e-47 |
| Msa1176160 | Msa1414930 | 0.841752 | 3.927559e-58 | -8.615850e-47 |
| Msa1176160 | Msa1420060 | 0.890880 | 6.601683e-74 | -8.615850e-47 |
| Msa1176160 | Msa1421550 | 0.888212 | 7.213301e-73 | -8.615850e-47 |
| Msa1176160 | Msa1431850 | 0.843834 | 1.098054e-58 | -8.615850e-47 |
| Msa1176160 | Msa1437700 | 0.809705 | 1.657928e-50 | -8.615850e-47 |
| Msa1176160 | Msa1437710 | 0.865081 | 7.649577e-65 | -8.615850e-47 |
| Msa1176160 | Msa1442290 | 0.834491 | 2.907449e-56 | -8.615850e-47 |
| Msa1176160 | Msa1449940 | 0.832787 | 7.744288e-56 | -8.615850e-47 |
| Msa1176160 | Msa1455320 | 0.803277 | 3.763859e-49 | -8.615850e-47 |
| Msa1176160 | Msa1461060 | 0.828036 | 1.123796e-54 | -8.615850e-47 |
| Msa0487570 | Msa1176160 | 0.814628 | 1.398433e-51 | -8.615850e-47 |
| Msa0487630 | Msa1176160 | 0.815269 | 1.007945e-51 | -8.615850e-47 |
| Msa0492190 | Msa1176160 | 0.818620 | 1.782632e-52 | -8.615850e-47 |
| Msa0503580 | Msa1176160 | 0.829957 | 3.847971e-55 | -8.615850e-47 |
| Msa0517330 | Msa1176160 | 0.808771 | 2.629221e-50 | -8.615850e-47 |
| Msa0517340 | Msa1176160 | 0.850892 | 1.265436e-60 | -8.615850e-47 |
| Msa0535040 | Msa1176160 | 0.812138 | 4.929460e-51 | -8.615850e-47 |
| Msa0537920 | Msa1176160 | 0.868418 | 6.625979e-66 | -8.615850e-47 |
| Msa0538060 | Msa1176160 | 0.805526 | 1.279039e-49 | -8.615850e-47 |
| Msa0538220 | Msa1176160 | 0.832076 | 1.161557e-55 | -8.615850e-47 |
| Msa0543850 | Msa1176160 | 0.816163 | 6.372529e-52 | -8.615850e-47 |
| Msa0560090 | Msa1176160 | 0.806745 | 7.086145e-50 | -8.615850e-47 |
| Msa0561510 | Msa1176160 | 0.804962 | 1.679566e-49 | -8.615850e-47 |
| Msa0585730 | Msa1176160 | 0.802585 | 5.232528e-49 | -8.615850e-47 |
| Msa0594090 | Msa1176160 | 0.836617 | 8.423433e-57 | -8.615850e-47 |
| Msa0601110 | Msa1176160 | 0.814361 | 1.602263e-51 | -8.615850e-47 |
| Msa0601120 | Msa1176160 | 0.807822 | 4.189864e-50 | -8.615850e-47 |
| Msa0844560 | Msa1176160 | 0.821557 | 3.790746e-53 | -8.615850e-47 |
| Msa0849280 | Msa1176160 | 0.811186 | 7.940084e-51 | -8.615850e-47 |
| Msa0851020 | Msa1176160 | 0.807215 | 5.636503e-50 | -8.615850e-47 |
| Msa0856520 | Msa1176160 | 0.855709 | 5.259605e-62 | -8.615850e-47 |
| Msa0860280 | Msa1176160 | 0.822986 | 1.765565e-53 | -8.615850e-47 |
| Msa0862100 | Msa1176160 | 0.820662 | 6.093764e-53 | -8.615850e-47 |
| Msa0867350 | Msa1176160 | 0.868127 | 8.225608e-66 | -8.615850e-47 |
| Msa0872310 | Msa1176160 | 0.849331 | 3.462919e-60 | -8.615850e-47 |
| Msa0873190 | Msa1176160 | 0.827016 | 1.974668e-54 | -8.615850e-47 |
| Msa0880140 | Msa1176160 | 0.815920 | 7.218597e-52 | -8.615850e-47 |
| Msa0885060 | Msa1176160 | 0.842962 | 1.876981e-58 | -8.615850e-47 |
| Msa0896210 | Msa1176160 | 0.806583 | 7.666808e-50 | -8.615850e-47 |
| Msa0898730 | Msa1176160 | 0.860102 | 2.610287e-63 | -8.615850e-47 |
| Msa0905550 | Msa1176160 | 0.842043 | 3.289805e-58 | -8.615850e-47 |
| Msa0929870 | Msa1176160 | 0.813543 | 2.426891e-51 | -8.615850e-47 |
| Msa0936410 | Msa1176160 | 0.808422 | 3.120996e-50 | -8.615850e-47 |
| Msa0937240 | Msa1176160 | 0.825242 | 5.216059e-54 | -8.615850e-47 |
| Msa0937550 | Msa1176160 | 0.832295 | 1.025703e-55 | -8.615850e-47 |
| Msa0946320 | Msa1176160 | 0.802948 | 4.401970e-49 | -8.615850e-47 |
| Msa0973250 | Msa1176160 | 0.807779 | 4.279017e-50 | -8.615850e-47 |
| Msa0974530 | Msa1176160 | 0.811109 | 8.252854e-51 | -8.615850e-47 |
| Msa0974750 | Msa1176160 | 0.801186 | 1.013831e-48 | -8.615850e-47 |
| Msa0979510 | Msa1176160 | 0.813340 | 2.690091e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176160 | MtrunA17_Chr8g0346321 | 96.825 | 252 | 8 | 0 | 1 | 252 | 1 | 252 | 0.0 | 497 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176160 | AT2G46640.2 | 30.736 | 231 | 125 | 9 | 12 | 226 | 38 | 249 | 4.87e-15 | 73.2 |
| Msa1176160 | AT2G46640.3 | 30.736 | 231 | 125 | 9 | 12 | 226 | 40 | 251 | 5.33e-15 | 73.2 |
| Msa1176160 | AT2G46640.1 | 30.736 | 231 | 125 | 9 | 12 | 226 | 26 | 237 | 5.44e-15 | 73.2 |
| Msa1176160 | AT2G46640.4 | 30.736 | 231 | 125 | 9 | 12 | 226 | 40 | 251 | 6.64e-15 | 73.2 |
Find 61 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGGTTGATGTTTAATT+TGG | 0.179702 | 8_1:+8196008 | Msa1176160:three_prime_UTR |
| AATCACATGGTTCAATTCTT+TGG | 0.203507 | 8_1:-8195907 | None:intergenic |
| AGAAAGTTGGCAACCGAATT+TGG | 0.231188 | 8_1:-8193027 | None:intergenic |
| ATTCGGTTGCCAACTTTCTA+AGG | 0.265173 | 8_1:+8193031 | Msa1176160:five_prime_UTR |
| CTTCCAAAGCAAAGTATTCT+TGG | 0.268337 | 8_1:-8193584 | None:intergenic |
| CTTCGCTCCATTTGCAACTT+AGG | 0.315676 | 8_1:+8193307 | Msa1176160:five_prime_UTR |
| GTATTCTTGGTGATTGTTCA+TGG | 0.327683 | 8_1:-8193571 | None:intergenic |
| CATGGTGTGATTTACCTTCA+TGG | 0.334098 | 8_1:-8193062 | None:intergenic |
| AACCTTCACCACACCAAATT+CGG | 0.343239 | 8_1:+8193014 | Msa1176160:five_prime_UTR |
| ATGGGAGTGTCACTGTTATC+TGG | 0.356185 | 8_1:+8195820 | Msa1176160:three_prime_UTR |
| GAAGATTATTCCCCTTGTTA+AGG | 0.356621 | 8_1:+8194010 | Msa1176160:CDS |
| GTTATCTGTGACTATATATA+TGG | 0.364917 | 8_1:+8195992 | Msa1176160:three_prime_UTR |
| GTTTGTTACAGATCTTCAAT+TGG | 0.412010 | 8_1:+8193222 | Msa1176160:intron |
| AATGATGATTAGAAACTTCA+AGG | 0.418804 | 8_1:+8193779 | Msa1176160:CDS |
| TCACCAAGAATACTTTGCTT+TGG | 0.419615 | 8_1:+8193581 | Msa1176160:CDS |
| ATTCTTACCATTGGTACTCT+TGG | 0.429438 | 8_1:+8193531 | Msa1176160:CDS |
| GTTTAATTTCCTTAGAAAGT+TGG | 0.431940 | 8_1:-8193040 | None:intergenic |
| TGTGTTCATGTTGTTTCTGT+TGG | 0.432041 | 8_1:+8195940 | Msa1176160:three_prime_UTR |
| ACTTGACTCAACCAAGACTT+TGG | 0.432800 | 8_1:-8193943 | None:intergenic |
| TTTGTTACAGATCTTCAATT+GGG | 0.432814 | 8_1:+8193223 | Msa1176160:intron |
| ACTTTCTTGATGTCTTTCAT+TGG | 0.437252 | 8_1:-8194044 | None:intergenic |
| AAACCGTTGAGAGTGTTGTT+AGG | 0.437651 | 8_1:-8193263 | None:intergenic |
| ATGATTTCATGACAAATCAT+AGG | 0.438088 | 8_1:-8193819 | None:intergenic |
| TCAAATGTGTTGTTGATCAA+TGG | 0.438577 | 8_1:-8193684 | None:intergenic |
| TTTGGAACCTAAGTTGCAAA+TGG | 0.442908 | 8_1:-8193314 | None:intergenic |
| TTTCCAATCACCGAGCATAT+CGG | 0.445673 | 8_1:-8193502 | None:intergenic |
| TGACCGATATGCTCGGTGAT+TGG | 0.446300 | 8_1:+8193499 | Msa1176160:CDS |
| TGATTCTTGACATCAAGATC+TGG | 0.455218 | 8_1:-8194408 | None:intergenic |
| ATTTGATGAGAACAACTTTG+AGG | 0.478699 | 8_1:+8193701 | Msa1176160:CDS |
| TTATCAGTGTTGTTGATTGA+AGG | 0.480019 | 8_1:-8193450 | None:intergenic |
| ATTAATAACCACATGAATGA+AGG | 0.483710 | 8_1:+8194450 | Msa1176160:CDS |
| ACGTATGAGATTAAATACTT+AGG | 0.485233 | 8_1:+8195863 | Msa1176160:three_prime_UTR |
| TGATGAAGAAGATGCTAAAG+AGG | 0.486614 | 8_1:+8194376 | Msa1176160:CDS |
| TATGATTTGTCATGAAATCA+TGG | 0.489589 | 8_1:+8193821 | Msa1176160:CDS |
| TTGAAGCTGATCAAAAGAAA+AGG | 0.490869 | 8_1:+8193856 | Msa1176160:CDS |
| TGATGATGATGCTAGAAAAG+AGG | 0.505541 | 8_1:+8193752 | Msa1176160:CDS |
| CTAAGGAAATTAAACCATGA+AGG | 0.509618 | 8_1:+8193048 | Msa1176160:five_prime_UTR |
| TTATTCTGCAGCCAAAGTCT+TGG | 0.511362 | 8_1:+8193932 | Msa1176160:CDS |
| TTTCTATGATGTTGAACAAG+AGG | 0.511917 | 8_1:+8193653 | Msa1176160:CDS |
| AGCCATTGCCTTCATTCATG+TGG | 0.516778 | 8_1:-8194458 | None:intergenic |
| TACTAGCTAGTGTTAAGCCA+TGG | 0.527892 | 8_1:+8195801 | Msa1176160:three_prime_UTR |
| TCTTCAATTGGGTGCACAAG+AGG | 0.532391 | 8_1:+8193234 | Msa1176160:five_prime_UTR |
| AAAGACGGAATTCTTACCAT+TGG | 0.543523 | 8_1:+8193522 | Msa1176160:CDS |
| AAACTTCAAGGAAATTGTTG+AGG | 0.544282 | 8_1:+8193791 | Msa1176160:CDS |
| CATCCTAACAACACTCTCAA+CGG | 0.551417 | 8_1:+8193260 | Msa1176160:five_prime_UTR |
| AACCGAATTTGGTGTGGTGA+AGG | 0.554082 | 8_1:-8193016 | None:intergenic |
| CTTCAAGGAAATTGTTGAGG+TGG | 0.564269 | 8_1:+8193794 | Msa1176160:CDS |
| ATCATAGCCAAGAGTACCAA+TGG | 0.569824 | 8_1:-8193538 | None:intergenic |
| CATCATCATCAACTACATCA+TGG | 0.574853 | 8_1:-8193740 | None:intergenic |
| ATGCTCGGTGATTGGAAAGA+CGG | 0.581029 | 8_1:+8193507 | Msa1176160:CDS |
| TCTTGACATCAAGATCTGGA+TGG | 0.589109 | 8_1:-8194404 | None:intergenic |
| ACTAGCTAGTGTTAAGCCAT+GGG | 0.596171 | 8_1:+8195802 | Msa1176160:three_prime_UTR |
| TGAATGAAGGCAATGGCTCA+AGG | 0.597220 | 8_1:+8194463 | Msa1176160:CDS |
| TGATTGTTCATGGATTTCAA+AGG | 0.604206 | 8_1:-8193561 | None:intergenic |
| AACCACATGAATGAAGGCAA+TGG | 0.612697 | 8_1:+8194456 | Msa1176160:CDS |
| AGATAACAGTGACACTCCCA+TGG | 0.629854 | 8_1:-8195818 | None:intergenic |
| GTTGCTTTGACCGATATGCT+CGG | 0.632441 | 8_1:+8193492 | Msa1176160:CDS |
| TCTTAACATCAGAATCAGCA+AGG | 0.653265 | 8_1:-8193899 | None:intergenic |
| GTTGGCAACCGAATTTGGTG+TGG | 0.690791 | 8_1:-8193022 | None:intergenic |
| ACACAAATTACAAAATCACA+TGG | 0.699258 | 8_1:-8195920 | None:intergenic |
| GATTTGTCATGAAATCATGG+AGG | 0.748556 | 8_1:+8193824 | Msa1176160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATAAATTTATTTTTGTT+TGG | - | chr8_1:8195378-8195397 | None:intergenic | 10.0% |
| !! | TGAATTGAAAAAAATTAATT+TGG | - | chr8_1:8195536-8195555 | None:intergenic | 10.0% |
| !!! | AATTAATTTTTTTCAATTCA+TGG | + | chr8_1:8195536-8195555 | Msa1176160:intron | 10.0% |
| !!! | TATAAATTTTGTCAAAAAAA+TGG | - | chr8_1:8195669-8195688 | None:intergenic | 10.0% |
| !!! | ATCATATATTATGAAATTTT+TGG | + | chr8_1:8195743-8195762 | Msa1176160:intron | 10.0% |
| !!! | TCATATATTATGAAATTTTT+GGG | + | chr8_1:8195744-8195763 | Msa1176160:intron | 10.0% |
| !!! | TTTATTTTAGACACAAAATT+TGG | - | chr8_1:8193335-8193354 | None:intergenic | 15.0% |
| !! | TCAAGCAAATAATTAATTAT+TGG | - | chr8_1:8194316-8194335 | None:intergenic | 15.0% |
| !! | ATTATTTGCTTGAAATTAAT+TGG | + | chr8_1:8194323-8194342 | Msa1176160:intron | 15.0% |
| !!! | CTAAATAATCATTTGATTTT+AGG | + | chr8_1:8194738-8194757 | Msa1176160:intron | 15.0% |
| !!! | TGTTTTTAAGATAAATAGAT+AGG | + | chr8_1:8195010-8195029 | Msa1176160:intron | 15.0% |
| !!! | AAAAAATTAATTTGGTAAAC+AGG | - | chr8_1:8195528-8195547 | None:intergenic | 15.0% |
| !!! | CACAATTTTTAAGACAATAA+AGG | - | chr8_1:8193150-8193169 | None:intergenic | 20.0% |
| !! | TAATTACATATATAGCCTTT+AGG | - | chr8_1:8194096-8194115 | None:intergenic | 20.0% |
| !!! | ATTTATTTCCATTTTCACAA+TGG | + | chr8_1:8194200-8194219 | Msa1176160:intron | 20.0% |
| !! | ATATTATCATTTACTTGTGA+TGG | + | chr8_1:8194550-8194569 | Msa1176160:intron | 20.0% |
| !! | CTATTTATCTTAAAAACAGA+AGG | - | chr8_1:8195008-8195027 | None:intergenic | 20.0% |
| !! | AAGATAAATAGATAGGTATA+TGG | + | chr8_1:8195017-8195036 | Msa1176160:intron | 20.0% |
| !!! | AGTGTTGATTTTTTTTACAA+AGG | - | chr8_1:8195078-8195097 | None:intergenic | 20.0% |
| !! | AAACTCTATAAAATCATGTT+TGG | + | chr8_1:8195261-8195280 | Msa1176160:intron | 20.0% |
| !! | AATAATACTAAGTGAATGTT+TGG | - | chr8_1:8195456-8195475 | None:intergenic | 20.0% |
| !!! | ATGAAATTTTTGGGTTTATT+TGG | + | chr8_1:8195753-8195772 | Msa1176160:intron | 20.0% |
| !!! | TATATGGTTGATGTTTAATT+TGG | + | chr8_1:8196008-8196027 | Msa1176160:three_prime_UTR | 20.0% |
| !! | GTTTAATTTCCTTAGAAAGT+TGG | - | chr8_1:8193043-8193062 | None:intergenic | 25.0% |
| ! | CATATGCATGAGAAATATAA+TGG | - | chr8_1:8193102-8193121 | None:intergenic | 25.0% |
| ! | TTTGTTACAGATCTTCAATT+GGG | + | chr8_1:8193223-8193242 | Msa1176160:intron | 25.0% |
| !!! | GTTTGTTGTTTTTACTTAGA+TGG | + | chr8_1:8193399-8193418 | Msa1176160:intron | 25.0% |
| ! | AATGATGATTAGAAACTTCA+AGG | + | chr8_1:8193779-8193798 | Msa1176160:CDS | 25.0% |
| ! | ATGATTTCATGACAAATCAT+AGG | - | chr8_1:8193822-8193841 | None:intergenic | 25.0% |
| !! | TATGATTTGTCATGAAATCA+TGG | + | chr8_1:8193821-8193840 | Msa1176160:CDS | 25.0% |
| !!! | CCATTTTTTGCTTTAAGTTT+TGG | - | chr8_1:8193975-8193994 | None:intergenic | 25.0% |
| ! | CCAAAACTTAAAGCAAAAAA+TGG | + | chr8_1:8193972-8193991 | Msa1176160:CDS | 25.0% |
| ! | TTGCTTGAAATTAATTGGTT+AGG | + | chr8_1:8194328-8194347 | Msa1176160:intron | 25.0% |
| ! | ATTAATAACCACATGAATGA+AGG | + | chr8_1:8194450-8194469 | Msa1176160:CDS | 25.0% |
| ! | AAAAAGACAGTTCATGAAAA+GGG | - | chr8_1:8194529-8194548 | None:intergenic | 25.0% |
| ! | AAAAAAGACAGTTCATGAAA+AGG | - | chr8_1:8194530-8194549 | None:intergenic | 25.0% |
| ! | ATGCATGTCTCAAATTAATT+TGG | + | chr8_1:8194609-8194628 | Msa1176160:intron | 25.0% |
| ! | GTAAACTCTTAGATACTTTA+GGG | + | chr8_1:8194760-8194779 | Msa1176160:intron | 25.0% |
| !! | CTGTATCATTCCAATTTTAT+CGG | + | chr8_1:8194863-8194882 | Msa1176160:intron | 25.0% |
| ! | ATTAATTTATAGTCCTTTCG+AGG | - | chr8_1:8194893-8194912 | None:intergenic | 25.0% |
| ! | TTTATCTTAAAAACAGAAGG+AGG | - | chr8_1:8195005-8195024 | None:intergenic | 25.0% |
| ! | TCTAAAAAAACACTCAAACT+GGG | + | chr8_1:8195110-8195129 | Msa1176160:intron | 25.0% |
| !! | TTATAGAGTTTGAATGCTTT+TGG | - | chr8_1:8195252-8195271 | None:intergenic | 25.0% |
| ! | TCAATATCACTTGAATAGAT+TGG | - | chr8_1:8195604-8195623 | None:intergenic | 25.0% |
| ! | ATCTATTCAAGTGATATTGA+TGG | + | chr8_1:8195604-8195623 | Msa1176160:intron | 25.0% |
| ! | TTTATTTGGATTAACCTTTC+TGG | + | chr8_1:8195767-8195786 | Msa1176160:intron | 25.0% |
| ! | ACGTATGAGATTAAATACTT+AGG | + | chr8_1:8195863-8195882 | Msa1176160:three_prime_UTR | 25.0% |
| ! | ACACAAATTACAAAATCACA+TGG | - | chr8_1:8195923-8195942 | None:intergenic | 25.0% |
| ! | GTTATCTGTGACTATATATA+TGG | + | chr8_1:8195992-8196011 | Msa1176160:three_prime_UTR | 25.0% |
| CTAAGGAAATTAAACCATGA+AGG | + | chr8_1:8193048-8193067 | Msa1176160:five_prime_UTR | 30.0% | |
| ! | GTTTGTTACAGATCTTCAAT+TGG | + | chr8_1:8193222-8193241 | Msa1176160:intron | 30.0% |
| ! | TTATCAGTGTTGTTGATTGA+AGG | - | chr8_1:8193453-8193472 | None:intergenic | 30.0% |
| TGATTGTTCATGGATTTCAA+AGG | - | chr8_1:8193564-8193583 | None:intergenic | 30.0% | |
| TTTCTATGATGTTGAACAAG+AGG | + | chr8_1:8193653-8193672 | Msa1176160:CDS | 30.0% | |
| ! | TCAAATGTGTTGTTGATCAA+TGG | - | chr8_1:8193687-8193706 | None:intergenic | 30.0% |
| ATTTGATGAGAACAACTTTG+AGG | + | chr8_1:8193701-8193720 | Msa1176160:CDS | 30.0% | |
| AAACTTCAAGGAAATTGTTG+AGG | + | chr8_1:8193791-8193810 | Msa1176160:CDS | 30.0% | |
| TTGAAGCTGATCAAAAGAAA+AGG | + | chr8_1:8193856-8193875 | Msa1176160:CDS | 30.0% | |
| ACTTTCTTGATGTCTTTCAT+TGG | - | chr8_1:8194047-8194066 | None:intergenic | 30.0% | |
| ! | TATCATTTACTTGTGATGGA+AGG | + | chr8_1:8194554-8194573 | Msa1176160:intron | 30.0% |
| ! | ATGATAACCTTTTCAACCTA+AGG | - | chr8_1:8194674-8194693 | None:intergenic | 30.0% |
| GGTAAACTCTTAGATACTTT+AGG | + | chr8_1:8194759-8194778 | Msa1176160:intron | 30.0% | |
| CGATAAAATTGGAATGATAC+AGG | - | chr8_1:8194865-8194884 | None:intergenic | 30.0% | |
| TACATACACAATTAAACTCG+AGG | + | chr8_1:8194952-8194971 | Msa1176160:intron | 30.0% | |
| ACAGAAGGAGGATAAAATTA+AGG | - | chr8_1:8194993-8195012 | None:intergenic | 30.0% | |
| ATAGATAGGTATATGGATGA+TGG | + | chr8_1:8195024-8195043 | Msa1176160:intron | 30.0% | |
| !!! | CAGTTTGAGTGTTTTTTTAG+AGG | - | chr8_1:8195111-8195130 | None:intergenic | 30.0% |
| ! | CTCTAAAAAAACACTCAAAC+TGG | + | chr8_1:8195109-8195128 | Msa1176160:intron | 30.0% |
| CCAAGAAAAAAGAGTTTAAG+AGG | - | chr8_1:8195137-8195156 | None:intergenic | 30.0% | |
| !!! | CCTCTTAAACTCTTTTTTCT+TGG | + | chr8_1:8195134-8195153 | Msa1176160:intron | 30.0% |
| TAACATCCTATCAATTAAGC+AGG | + | chr8_1:8195161-8195180 | Msa1176160:intron | 30.0% | |
| ATGTATCCTGCTTAATTGAT+AGG | - | chr8_1:8195170-8195189 | None:intergenic | 30.0% | |
| CAATTCAACTCATCTTTACA+TGG | + | chr8_1:8195346-8195365 | Msa1176160:intron | 30.0% | |
| ! | TAATATGCCTCTTTTTGTAG+TGG | + | chr8_1:8195638-8195657 | Msa1176160:intron | 30.0% |
| AATCACATGGTTCAATTCTT+TGG | - | chr8_1:8195910-8195929 | None:intergenic | 30.0% | |
| ! | TTTGGAACCTAAGTTGCAAA+TGG | - | chr8_1:8193317-8193336 | None:intergenic | 35.0% |
| AAAGACGGAATTCTTACCAT+TGG | + | chr8_1:8193522-8193541 | Msa1176160:CDS | 35.0% | |
| ATTCTTACCATTGGTACTCT+TGG | + | chr8_1:8193531-8193550 | Msa1176160:CDS | 35.0% | |
| ! | GTATTCTTGGTGATTGTTCA+TGG | - | chr8_1:8193574-8193593 | None:intergenic | 35.0% |
| TCACCAAGAATACTTTGCTT+TGG | + | chr8_1:8193581-8193600 | Msa1176160:CDS | 35.0% | |
| ! | CTTCCAAAGCAAAGTATTCT+TGG | - | chr8_1:8193587-8193606 | None:intergenic | 35.0% |
| CATCATCATCAACTACATCA+TGG | - | chr8_1:8193743-8193762 | None:intergenic | 35.0% | |
| ! | TGATGATGATGCTAGAAAAG+AGG | + | chr8_1:8193752-8193771 | Msa1176160:CDS | 35.0% |
| GATTTGTCATGAAATCATGG+AGG | + | chr8_1:8193824-8193843 | Msa1176160:CDS | 35.0% | |
| TCTTAACATCAGAATCAGCA+AGG | - | chr8_1:8193902-8193921 | None:intergenic | 35.0% | |
| GAAGATTATTCCCCTTGTTA+AGG | + | chr8_1:8194010-8194029 | Msa1176160:CDS | 35.0% | |
| ! | ACGTGCATTTTCCTTAACAA+GGG | - | chr8_1:8194024-8194043 | None:intergenic | 35.0% |
| CATTGACACCATTGTGAAAA+TGG | - | chr8_1:8194211-8194230 | None:intergenic | 35.0% | |
| TTGTAGATAGGATAGTGTTG+AGG | + | chr8_1:8194290-8194309 | Msa1176160:intron | 35.0% | |
| TGATGAAGAAGATGCTAAAG+AGG | + | chr8_1:8194376-8194395 | Msa1176160:CDS | 35.0% | |
| TGATTCTTGACATCAAGATC+TGG | - | chr8_1:8194411-8194430 | None:intergenic | 35.0% | |
| ! | AGGTCTTTTATCGCAGTTTA+AGG | + | chr8_1:8194483-8194502 | Msa1176160:CDS | 35.0% |
| ACATGACAAACACATACCTT+AGG | + | chr8_1:8194655-8194674 | Msa1176160:intron | 35.0% | |
| !! | ACACATACCTTAGGTTGAAA+AGG | + | chr8_1:8194664-8194683 | Msa1176160:intron | 35.0% |
| !! | ACTTTAGGGTTTAGTCGTAT+CGG | + | chr8_1:8194774-8194793 | Msa1176160:intron | 35.0% |
| TTTCAGTGAAGATAGATGCA+GGG | + | chr8_1:8195494-8195513 | Msa1176160:intron | 35.0% | |
| ! | ACCTCTTTGTTTGGATGTTT+GGG | - | chr8_1:8195563-8195582 | None:intergenic | 35.0% |
| ! | AACCTCTTTGTTTGGATGTT+TGG | - | chr8_1:8195564-8195583 | None:intergenic | 35.0% |
| GCTATATGAACCTCTTTGTT+TGG | - | chr8_1:8195572-8195591 | None:intergenic | 35.0% | |
| GGTTTAACCACTACAAAAAG+AGG | - | chr8_1:8195648-8195667 | None:intergenic | 35.0% | |
| !! | TGTGTTCATGTTGTTTCTGT+TGG | + | chr8_1:8195940-8195959 | Msa1176160:three_prime_UTR | 35.0% |
| AACCTTCACCACACCAAATT+CGG | + | chr8_1:8193014-8193033 | Msa1176160:five_prime_UTR | 40.0% | |
| AGAAAGTTGGCAACCGAATT+TGG | - | chr8_1:8193030-8193049 | None:intergenic | 40.0% | |
| ATTCGGTTGCCAACTTTCTA+AGG | + | chr8_1:8193031-8193050 | Msa1176160:five_prime_UTR | 40.0% | |
| CATGGTGTGATTTACCTTCA+TGG | - | chr8_1:8193065-8193084 | None:intergenic | 40.0% | |
| CATCCTAACAACACTCTCAA+CGG | + | chr8_1:8193260-8193279 | Msa1176160:five_prime_UTR | 40.0% | |
| !! | AAACCGTTGAGAGTGTTGTT+AGG | - | chr8_1:8193266-8193285 | None:intergenic | 40.0% |
| TTTCCAATCACCGAGCATAT+CGG | - | chr8_1:8193505-8193524 | None:intergenic | 40.0% | |
| !! | ATCATAGCCAAGAGTACCAA+TGG | - | chr8_1:8193541-8193560 | None:intergenic | 40.0% |
| CTTCAAGGAAATTGTTGAGG+TGG | + | chr8_1:8193794-8193813 | Msa1176160:CDS | 40.0% | |
| TTATTCTGCAGCCAAAGTCT+TGG | + | chr8_1:8193932-8193951 | Msa1176160:CDS | 40.0% | |
| ACTTGACTCAACCAAGACTT+TGG | - | chr8_1:8193946-8193965 | None:intergenic | 40.0% | |
| ! | CGTGCATTTTCCTTAACAAG+GGG | - | chr8_1:8194023-8194042 | None:intergenic | 40.0% |
| ! | GACGTGCATTTTCCTTAACA+AGG | - | chr8_1:8194025-8194044 | None:intergenic | 40.0% |
| CTACATCATGCACTTCCTAA+AGG | + | chr8_1:8194078-8194097 | Msa1176160:intron | 40.0% | |
| ATCTACAAAAGAGTCCTCAC+TGG | - | chr8_1:8194278-8194297 | None:intergenic | 40.0% | |
| ! | GTGAGGACTCTTTTGTAGAT+AGG | + | chr8_1:8194278-8194297 | Msa1176160:intron | 40.0% |
| TCTTGACATCAAGATCTGGA+TGG | - | chr8_1:8194407-8194426 | None:intergenic | 40.0% | |
| AACCACATGAATGAAGGCAA+TGG | + | chr8_1:8194456-8194475 | Msa1176160:CDS | 40.0% | |
| ! | TACTTGTGATGGAAGGTTTG+TGG | + | chr8_1:8194561-8194580 | Msa1176160:intron | 40.0% |
| TCGAGGACATCCGATAAAAT+TGG | - | chr8_1:8194876-8194895 | None:intergenic | 40.0% | |
| ! | TTTTATCGGATGTCCTCGAA+AGG | + | chr8_1:8194877-8194896 | Msa1176160:intron | 40.0% |
| CTTTCAGTGAAGATAGATGC+AGG | + | chr8_1:8195493-8195512 | Msa1176160:intron | 40.0% | |
| TCCCAAACATCCAAACAAAG+AGG | + | chr8_1:8195559-8195578 | Msa1176160:intron | 40.0% | |
| !! | TAACCTTTCTGGTTTGTTGC+AGG | + | chr8_1:8195778-8195797 | Msa1176160:intron | 40.0% |
| TACTAGCTAGTGTTAAGCCA+TGG | + | chr8_1:8195801-8195820 | Msa1176160:three_prime_UTR | 40.0% | |
| ACTAGCTAGTGTTAAGCCAT+GGG | + | chr8_1:8195802-8195821 | Msa1176160:three_prime_UTR | 40.0% | |
| !! | AACCGAATTTGGTGTGGTGA+AGG | - | chr8_1:8193019-8193038 | None:intergenic | 45.0% |
| TCTTCAATTGGGTGCACAAG+AGG | + | chr8_1:8193234-8193253 | Msa1176160:five_prime_UTR | 45.0% | |
| CTTCGCTCCATTTGCAACTT+AGG | + | chr8_1:8193307-8193326 | Msa1176160:five_prime_UTR | 45.0% | |
| ! | GTTGCTTTGACCGATATGCT+CGG | + | chr8_1:8193492-8193511 | Msa1176160:CDS | 45.0% |
| ! | ATGCTCGGTGATTGGAAAGA+CGG | + | chr8_1:8193507-8193526 | Msa1176160:CDS | 45.0% |
| GCTTCATAGTTTGACCAGTG+AGG | + | chr8_1:8194261-8194280 | Msa1176160:intron | 45.0% | |
| AGCCATTGCCTTCATTCATG+TGG | - | chr8_1:8194461-8194480 | None:intergenic | 45.0% | |
| TGAATGAAGGCAATGGCTCA+AGG | + | chr8_1:8194463-8194482 | Msa1176160:CDS | 45.0% | |
| GTACCTGCAACAAACCAGAA+AGG | - | chr8_1:8195784-8195803 | None:intergenic | 45.0% | |
| AGATAACAGTGACACTCCCA+TGG | - | chr8_1:8195821-8195840 | None:intergenic | 45.0% | |
| !! | ATGGGAGTGTCACTGTTATC+TGG | + | chr8_1:8195820-8195839 | Msa1176160:three_prime_UTR | 45.0% |
| ! | GTTGGCAACCGAATTTGGTG+TGG | - | chr8_1:8193025-8193044 | None:intergenic | 50.0% |
| ATGGCTGTGTTGTGTGTGCA+TGG | - | chr8_1:8193083-8193102 | None:intergenic | 50.0% | |
| ! | TGACCGATATGCTCGGTGAT+TGG | + | chr8_1:8193499-8193518 | Msa1176160:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 8192998 | 8196055 | 8192998 | ID=Msa1176160;Name=Msa1176160 |
| chr8_1 | mRNA | 8192998 | 8196055 | 8192998 | ID=Msa1176160-mRNA-1;Parent=Msa1176160;Name=Msa1176160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=185|1|1|1|0.25|0|5|257|252 |
| chr8_1 | exon | 8192998 | 8193069 | 8192998 | ID=Msa1176160-mRNA-1:exon:2808;Parent=Msa1176160-mRNA-1 |
| chr8_1 | exon | 8193233 | 8193328 | 8193233 | ID=Msa1176160-mRNA-1:exon:2809;Parent=Msa1176160-mRNA-1 |
| chr8_1 | exon | 8193418 | 8194064 | 8193418 | ID=Msa1176160-mRNA-1:exon:2810;Parent=Msa1176160-mRNA-1 |
| chr8_1 | exon | 8194375 | 8194504 | 8194375 | ID=Msa1176160-mRNA-1:exon:2811;Parent=Msa1176160-mRNA-1 |
| chr8_1 | exon | 8195800 | 8196055 | 8195800 | ID=Msa1176160-mRNA-1:exon:2812;Parent=Msa1176160-mRNA-1 |
| chr8_1 | five_prime_UTR | 8192998 | 8193069 | 8192998 | ID=Msa1176160-mRNA-1:five_prime_utr;Parent=Msa1176160-mRNA-1 |
| chr8_1 | five_prime_UTR | 8193233 | 8193328 | 8193233 | ID=Msa1176160-mRNA-1:five_prime_utr;Parent=Msa1176160-mRNA-1 |
| chr8_1 | five_prime_UTR | 8193418 | 8193434 | 8193418 | ID=Msa1176160-mRNA-1:five_prime_utr;Parent=Msa1176160-mRNA-1 |
| chr8_1 | CDS | 8193435 | 8194064 | 8193435 | ID=Msa1176160-mRNA-1:cds;Parent=Msa1176160-mRNA-1 |
| chr8_1 | CDS | 8194375 | 8194503 | 8194375 | ID=Msa1176160-mRNA-1:cds;Parent=Msa1176160-mRNA-1 |
| chr8_1 | three_prime_UTR | 8194504 | 8194504 | 8194504 | ID=Msa1176160-mRNA-1:three_prime_utr;Parent=Msa1176160-mRNA-1 |
| chr8_1 | three_prime_UTR | 8195800 | 8196055 | 8195800 | ID=Msa1176160-mRNA-1:three_prime_utr;Parent=Msa1176160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
