AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1201160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1201160 MtrunA17_Chr8g0370941 89.864 513 48 2 1 510 1 512 0.0 944
Msa1201160 MtrunA17_Chr5g0403641 44.606 482 222 10 8 484 59 500 1.42e-124 374
Msa1201160 MtrunA17_Chr7g0275511 39.718 496 264 16 6 492 13 482 1.03e-107 329
Msa1201160 MtrunA17_Chr8g0347281 40.169 473 253 10 6 475 16 461 2.52e-105 323
Msa1201160 MtrunA17_Chr7g0232391 42.062 485 252 13 3 482 1 461 2.87e-104 320
Msa1201160 MtrunA17_Chr8g0347271 39.323 473 257 10 6 475 17 462 2.14e-103 318
Msa1201160 MtrunA17_Chr7g0232341 40.452 487 258 15 3 482 1 462 1.33e-102 316
Msa1201160 MtrunA17_Chr7g0232331 38.742 493 270 14 3 488 1 468 2.38e-98 305
Msa1201160 MtrunA17_Chr8g0334861 37.810 484 274 13 3 483 1 460 1.88e-96 300
Msa1201160 MtrunA17_Chr7g0232411 39.506 486 263 14 3 482 1 461 1.89e-96 300
Msa1201160 MtrunA17_Chr7g0232401 37.037 486 271 11 3 479 1 460 1.80e-95 297
Msa1201160 MtrunA17_Chr8g0336741 37.917 480 268 11 8 482 13 467 3.07e-94 294
Msa1201160 MtrunA17_Chr6g0449931 39.085 481 266 12 7 482 5 463 3.16e-94 294
Msa1201160 MtrunA17_Chr8g0335141 37.247 494 254 16 5 480 7 462 1.09e-93 293
Msa1201160 MtrunA17_Chr8g0335161 36.196 489 272 13 3 480 1 460 1.26e-93 292
Msa1201160 MtrunA17_Chr8g0373301 35.845 491 269 14 5 482 5 462 1.55e-93 292
Msa1201160 MtrunA17_Chr8g0336731 37.895 475 265 11 15 483 37 487 2.36e-92 290
Msa1201160 MtrunA17_Chr1g0153451 36.383 481 279 10 5 482 3 459 2.47e-92 289
Msa1201160 MtrunA17_Chr6g0459311 36.821 497 276 16 5 493 10 476 7.29e-92 288
Msa1201160 MtrunA17_Chr8g0336651 37.500 488 269 13 5 482 778 1239 1.87e-91 303
Msa1201160 MtrunA17_Chr8g0336651 38.302 483 268 11 5 482 3 460 1.75e-89 298
Msa1201160 MtrunA17_Chr8g0336651 35.154 293 135 6 192 482 531 770 7.28e-46 172
Msa1201160 MtrunA17_Chr6g0486251 37.552 482 265 14 7 480 5 458 4.58e-91 286
Msa1201160 MtrunA17_Chr6g0486201 37.552 482 265 14 7 480 5 458 4.58e-91 286
Msa1201160 MtrunA17_Chr8g0336691 38.351 485 267 13 5 482 916 1375 1.55e-90 302
Msa1201160 MtrunA17_Chr8g0336691 36.439 483 279 11 5 482 10 469 3.14e-84 284
Msa1201160 MtrunA17_Chr8g0336691 35.802 486 250 12 5 482 477 908 9.06e-82 277
Msa1201160 MtrunA17_Chr8g0361371 35.174 489 278 16 7 483 6 467 9.21e-90 283
Msa1201160 MtrunA17_Chr7g0232311 36.420 486 276 14 8 487 6 464 1.53e-89 282
Msa1201160 MtrunA17_Chr8g0339451 35.685 482 271 10 11 479 1 456 8.95e-89 280
Msa1201160 MtrunA17_Chr8g0334851 35.282 479 285 9 7 480 5 463 1.31e-88 280
Msa1201160 MtrunA17_Chr8g0339631 35.700 493 271 13 3 480 1 462 8.73e-87 275
Msa1201160 MtrunA17_Chr8g0334831 35.306 490 285 15 7 483 5 475 1.46e-86 275
Msa1201160 MtrunA17_Chr8g0339461 35.438 491 278 11 3 480 1 465 2.34e-86 274
Msa1201160 MtrunA17_Chr6g0462531 35.671 499 259 16 9 485 5 463 1.05e-83 267
Msa1201160 MtrunA17_Chr7g0232351 41.562 397 209 8 3 395 1 378 5.50e-82 259
Msa1201160 MtrunA17_Chr6g0462571 35.787 489 257 16 9 479 5 454 2.21e-79 256
Msa1201160 MtrunA17_Chr6g0462521 35.091 493 256 17 9 485 5 449 5.81e-79 254
Msa1201160 MtrunA17_Chr6g0462541 34.413 494 265 13 9 482 5 459 4.85e-78 252
Msa1201160 MtrunA17_Chr3g0079731 35.685 496 285 13 7 487 5 481 2.94e-77 250
Msa1201160 MtrunA17_Chr6g0462551 33.884 484 276 11 9 479 5 457 6.91e-77 249
Msa1201160 MtrunA17_Chr8g0339441 33.676 487 248 13 3 479 1 422 7.02e-75 243
Msa1201160 MtrunA17_Chr5g0448521 31.237 493 301 13 5 486 2 467 2.43e-74 242
Msa1201160 MtrunA17_Chr8g0339601 37.685 337 191 7 145 479 4 323 7.09e-74 237
Msa1201160 MtrunA17_Chr5g0442541 31.440 493 298 16 5 486 2 465 1.01e-66 222
Msa1201160 MtrunA17_Chr5g0442511 30.060 499 287 15 5 489 46 496 2.63e-65 219
Msa1201160 MtrunA17_Chr5g0429681 29.376 497 304 12 2 486 38 499 2.94e-64 217
Msa1201160 MtrunA17_Chr5g0442601 33.268 508 286 18 5 489 401 878 4.07e-64 223
Msa1201160 MtrunA17_Chr5g0442601 30.952 336 173 11 97 418 43 333 4.75e-34 137
Msa1201160 MtrunA17_Chr5g0442561 30.934 514 286 20 5 489 2 475 2.37e-63 214
Msa1201160 MtrunA17_Chr5g0442521 30.279 502 308 15 5 489 2 478 5.86e-63 213
Msa1201160 MtrunA17_Chr5g0429711 30.200 500 291 14 2 486 5 461 1.17e-62 211
Msa1201160 MtrunA17_Chr2g0302991 33.065 496 281 17 8 488 5 464 1.36e-60 206
Msa1201160 MtrunA17_Chr5g0442581 31.076 502 299 16 5 486 2 476 1.48e-60 207
Msa1201160 MtrunA17_Chr2g0302961 30.237 506 285 14 8 488 5 467 8.30e-60 204
Msa1201160 MtrunA17_Chr5g0440421 29.502 522 293 16 5 486 7 493 6.14e-59 202
Msa1201160 MtrunA17_Chr5g0442491 29.703 505 306 16 5 489 2 477 2.33e-56 195
Msa1201160 MtrunA17_Chr4g0042931 31.365 491 287 17 8 484 7 461 6.47e-54 188
Msa1201160 MtrunA17_Chr1g0153461 42.793 222 111 4 261 482 3 208 6.87e-54 181
Msa1201160 MtrunA17_Chr4g0044511 28.655 513 294 18 8 491 40 509 9.33e-51 181
Msa1201160 MtrunA17_Chr4g0014061 29.032 527 292 18 5 499 6 482 5.28e-50 178
Msa1201160 MtrunA17_Chr7g0243771 28.518 533 297 21 8 504 6 490 8.74e-50 177
Msa1201160 MtrunA17_Chr7g0243951 27.425 536 300 20 8 503 11 497 2.10e-49 177
Msa1201160 MtrunA17_Chr7g0243931 28.437 531 288 20 8 493 17 500 2.32e-49 177
Msa1201160 MtrunA17_Chr7g0243631 27.799 518 299 17 1 483 6 483 7.64e-49 175
Msa1201160 MtrunA17_Chr7g0243801 28.330 533 298 21 8 504 7 491 1.70e-48 174
Msa1201160 MtrunA17_Chr7g0243871 29.020 510 279 20 8 483 9 469 2.06e-48 174
Msa1201160 MtrunA17_Chr4g0042891 30.612 490 294 19 8 484 7 463 1.03e-47 172
Msa1201160 MtrunA17_Chr7g0243781 28.407 521 271 21 8 483 9 472 1.30e-47 172
Msa1201160 MtrunA17_Chr7g0243861 29.533 535 287 21 8 499 14 501 2.06e-47 171
Msa1201160 MtrunA17_Chr7g0265051 26.346 520 306 14 8 490 9 488 4.25e-47 171
Msa1201160 MtrunA17_Chr5g0420801 29.447 506 282 20 7 488 6 460 5.32e-47 169
Msa1201160 MtrunA17_Chr7g0243681 27.921 505 296 16 8 483 11 476 6.33e-47 170
Msa1201160 MtrunA17_Chr6g0454341 27.432 514 288 19 8 484 10 475 7.65e-47 169
Msa1201160 MtrunA17_Chr8g0361411 29.940 501 280 18 7 488 7 455 2.77e-46 167
Msa1201160 MtrunA17_Chr6g0464871 28.745 494 265 17 8 475 23 455 6.75e-46 167
Msa1201160 MtrunA17_Chr3g0078841 26.357 516 291 20 8 484 10 475 1.03e-45 166
Msa1201160 MtrunA17_Chr2g0329111 29.019 479 279 15 9 463 7 448 1.11e-45 166
Msa1201160 MtrunA17_Chr6g0454401 27.202 511 302 16 5 484 7 478 2.49e-45 166
Msa1201160 MtrunA17_Chr6g0464841 28.513 491 270 17 8 475 11 443 4.16e-45 164
Msa1201160 MtrunA17_Chr4g0050341 27.713 516 286 19 8 483 19 487 7.16e-45 164
Msa1201160 MtrunA17_Chr5g0426431 27.853 517 280 15 7 483 11 474 9.20e-45 164
Msa1201160 MtrunA17_Chr1g0159551 26.025 488 300 18 15 488 21 461 1.80e-44 162
Msa1201160 MtrunA17_Chr4g0066151 27.621 496 282 17 18 483 28 476 3.17e-44 162
Msa1201160 MtrunA17_Chr8g0366391 28.682 516 284 18 6 484 7 475 8.69e-44 161
Msa1201160 MtrunA17_Chr7g0265101 25.191 524 309 16 8 490 9 490 9.63e-44 161
Msa1201160 MtrunA17_Chr7g0265151 27.660 517 294 18 8 486 9 483 1.98e-43 160
Msa1201160 MtrunA17_Chr5g0401851 27.291 502 288 15 19 484 21 481 2.41e-43 160
Msa1201160 MtrunA17_Chr4g0066201 26.337 505 298 17 5 483 15 471 2.74e-43 160
Msa1201160 MtrunA17_Chr8g0369341 28.000 500 307 13 7 488 6 470 3.44e-43 159
Msa1201160 MtrunA17_Chr6g0454181 24.952 525 302 18 8 490 10 484 6.74e-43 159
Msa1201160 MtrunA17_Chr4g0011051 25.235 531 301 17 8 488 9 493 8.23e-43 159
Msa1201160 MtrunA17_Chr5g0419761 28.215 521 294 20 5 486 6 485 8.36e-43 159
Msa1201160 MtrunA17_Chr6g0454301 27.821 514 291 21 5 484 261 728 1.23e-42 161
Msa1201160 MtrunA17_Chr6g0454301 31.395 258 129 8 240 484 5 227 1.01e-29 123
Msa1201160 MtrunA17_Chr6g0464861 28.543 494 265 19 8 475 11 442 1.52e-42 157
Msa1201160 MtrunA17_Chr4g0060511 27.606 518 289 19 8 483 11 484 1.64e-42 158
Msa1201160 MtrunA17_Chr4g0066221 26.719 509 304 17 1 479 4 473 1.88e-42 157
Msa1201160 MtrunA17_Chr4g0044521 26.061 495 293 14 16 484 17 464 1.96e-42 157
Msa1201160 MtrunA17_Chr1g0207831 27.466 517 296 17 1 489 1 466 3.61e-42 157
Msa1201160 MtrunA17_Chr6g0482061 28.659 492 293 19 7 474 10 467 3.65e-42 157
Msa1201160 MtrunA17_Chr1g0161351 26.575 508 301 15 8 488 37 499 3.89e-42 157
Msa1201160 MtrunA17_Chr5g0414331 28.269 520 263 23 8 491 13 458 3.90e-42 156
Msa1201160 MtrunA17_Chr8g0355221 26.482 506 285 17 19 484 26 484 4.76e-42 157
Msa1201160 MtrunA17_Chr4g0066281 24.708 514 305 17 5 489 9 469 5.64e-42 156
Msa1201160 MtrunA17_Chr3g0092641 27.734 512 287 19 8 484 12 475 7.64e-42 155
Msa1201160 MtrunA17_Chr6g0454291 30.244 410 215 15 101 484 110 474 9.34e-42 155
Msa1201160 MtrunA17_Chr1g0173121 33.730 252 142 5 241 488 234 464 1.17e-41 155
Msa1201160 MtrunA17_Chr8g0336331 26.641 518 305 19 5 490 7 481 1.62e-41 155
Msa1201160 MtrunA17_Chr3g0118691 26.104 521 307 19 1 484 1 480 1.66e-41 155
Msa1201160 MtrunA17_Chr3g0098111 26.565 527 302 17 6 508 7 472 1.77e-41 155
Msa1201160 MtrunA17_Chr7g0235051 27.146 501 271 16 8 479 11 446 2.19e-41 154
Msa1201160 MtrunA17_Chr7g0217881 28.250 400 218 11 101 484 113 459 2.61e-41 154
Msa1201160 MtrunA17_Chr8g0382021 36.123 227 129 4 262 488 280 490 3.82e-41 154
Msa1201160 MtrunA17_Chr1g0207861 26.046 526 304 16 7 508 7 471 4.86e-41 154
Msa1201160 MtrunA17_Chr6g0454321 26.482 506 293 16 8 479 10 470 4.88e-41 156
Msa1201160 MtrunA17_Chr7g0243851 31.270 307 158 8 196 483 167 439 1.06e-40 152
Msa1201160 MtrunA17_Chr7g0243711 33.210 271 136 7 233 483 68 313 2.23e-40 148
Msa1201160 MtrunA17_Chr4g0066131 25.806 496 301 13 18 488 23 476 2.61e-40 152
Msa1201160 MtrunA17_Chr7g0243761 27.557 479 255 16 4 438 7 437 3.91e-40 151
Msa1201160 MtrunA17_Chr6g0453951 25.290 518 302 17 5 484 54 524 4.06e-40 152
Msa1201160 MtrunA17_Chr5g0423981 25.787 508 285 18 8 491 10 449 5.84e-40 150
Msa1201160 MtrunA17_Chr6g0454201 30.117 342 174 11 161 484 184 478 1.22e-39 150
Msa1201160 MtrunA17_Chr5g0431401 26.559 497 291 16 8 487 10 449 1.35e-39 149
Msa1201160 MtrunA17_Chr6g0463851 25.483 518 309 16 1 483 4 479 1.85e-39 149
Msa1201160 MtrunA17_Chr8g0365811 25.568 528 308 16 6 508 493 960 2.42e-39 152
Msa1201160 MtrunA17_Chr8g0365811 26.452 465 263 14 6 435 7 427 2.87e-37 146
Msa1201160 MtrunA17_Chr8g0359821 25.427 527 301 21 5 490 7 482 2.45e-39 149
Msa1201160 MtrunA17_Chr3g0118701 23.962 530 319 17 1 490 1 486 3.37e-39 149
Msa1201160 MtrunA17_Chr6g0454151 29.254 335 181 10 170 491 191 482 6.29e-39 148
Msa1201160 MtrunA17_Chr5g0419771 26.054 522 298 19 8 486 36 512 9.57e-39 148
Msa1201160 MtrunA17_Chr1g0165701 24.652 503 295 15 19 484 26 481 9.62e-39 147
Msa1201160 MtrunA17_Chr3g0112771 27.200 500 295 15 2 486 6 451 1.43e-38 146
Msa1201160 MtrunA17_Chr6g0454361 27.628 409 227 16 101 484 114 478 1.48e-38 147
Msa1201160 MtrunA17_Chr6g0454191 26.515 528 296 21 5 490 8 485 1.98e-38 146
Msa1201160 MtrunA17_Chr7g0275681 25.440 511 313 15 8 489 12 483 3.18e-38 145
Msa1201160 MtrunA17_Chr6g0454211 28.298 523 293 21 5 490 294 771 3.69e-38 149
Msa1201160 MtrunA17_Chr6g0454331 27.514 527 293 24 5 490 5 483 4.00e-38 145
Msa1201160 MtrunA17_Chr7g0265141 26.306 517 281 17 8 475 9 474 4.01e-38 145
Msa1201160 MtrunA17_Chr5g0431371 27.381 504 280 16 7 487 9 449 4.10e-38 145
Msa1201160 MtrunA17_Chr3g0118671 25.049 507 307 16 8 483 6 470 4.12e-38 145
Msa1201160 MtrunA17_Chr4g0053501 26.719 509 309 18 8 496 11 475 4.52e-38 145
Msa1201160 MtrunA17_Chr4g0066171 25.150 501 308 16 5 483 18 473 4.84e-38 145
Msa1201160 MtrunA17_Chr2g0278711 27.425 536 273 22 1 483 1 473 5.77e-38 145
Msa1201160 MtrunA17_Chr6g0463891 26.931 505 305 16 9 484 13 482 8.01e-38 145
Msa1201160 MtrunA17_Chr4g0032331 28.628 503 272 22 9 486 9 449 9.22e-38 144
Msa1201160 MtrunA17_Chr3g0118771 25.591 508 305 15 8 484 21 486 1.09e-37 144
Msa1201160 MtrunA17_Chr8g0374941 27.811 507 284 22 8 479 951 1410 1.23e-37 148
Msa1201160 MtrunA17_Chr8g0374941 27.586 493 283 23 8 469 13 462 6.71e-34 136
Msa1201160 MtrunA17_Chr8g0374941 30.000 280 157 7 205 468 670 926 4.12e-31 128
Msa1201160 MtrunA17_Chr3g0106231 25.963 493 294 13 7 486 17 451 1.65e-37 144
Msa1201160 MtrunA17_Chr7g0249931 26.044 503 289 17 5 483 37 480 1.82e-37 144
Msa1201160 MtrunA17_Chr6g0463861 28.571 392 223 13 109 479 111 466 2.13e-37 144
Msa1201160 MtrunA17_Chr1g0207971 26.190 504 295 16 8 489 8 456 2.39e-37 143
Msa1201160 MtrunA17_Chr5g0431361 26.157 497 298 14 7 487 11 454 2.82e-37 142
Msa1201160 MtrunA17_Chr5g0414321 28.460 513 255 25 8 483 11 448 2.87e-37 143
Msa1201160 MtrunA17_Chr5g0431421 25.979 485 285 14 8 475 10 437 4.03e-37 142
Msa1201160 MtrunA17_Chr4g0066261 31.849 292 157 9 205 479 208 474 5.33e-37 142
Msa1201160 MtrunA17_Chr7g0243811 34.340 265 124 7 186 433 157 388 5.96e-37 140
Msa1201160 MtrunA17_Chr4g0053321 28.884 502 287 22 5 483 22 476 6.00e-37 142
Msa1201160 MtrunA17_Chr6g0464881 26.326 509 281 19 8 488 11 453 6.12e-37 142
Msa1201160 MtrunA17_Chr5g0416741 24.419 516 300 16 9 483 14 480 6.28e-37 142
Msa1201160 MtrunA17_Chr5g0431441 27.218 496 274 15 8 475 18 454 1.27e-36 141
Msa1201160 MtrunA17_Chr1g0207951 29.114 395 226 13 109 492 763 1114 1.42e-36 144
Msa1201160 MtrunA17_Chr1g0207951 25.344 509 298 14 6 489 122 573 4.80e-36 143
Msa1201160 MtrunA17_Chr3g0118711 24.612 516 305 15 5 484 11 478 1.90e-36 141
Msa1201160 MtrunA17_Chr5g0426401 28.440 327 182 7 170 483 20 307 2.14e-36 137
Msa1201160 MtrunA17_Chr3g0079711 40.594 202 103 6 288 487 3 189 2.20e-36 133
Msa1201160 MtrunA17_Chr8g0374971 32.258 310 165 12 188 479 191 473 5.95e-36 139
Msa1201160 MtrunA17_Chr1g0179901 23.828 512 323 16 8 486 16 493 8.73e-36 139
Msa1201160 MtrunA17_Chr7g0265041 25.725 517 313 14 8 489 11 491 8.79e-36 139
Msa1201160 MtrunA17_Chr6g0453961 23.892 519 303 16 8 484 19 487 1.18e-35 139
Msa1201160 MtrunA17_Chr5g0401721 26.337 505 296 22 9 483 9 467 1.54e-35 138
Msa1201160 MtrunA17_Chr2g0294931 31.507 292 158 9 205 479 208 474 2.15e-35 138
Msa1201160 MtrunA17_Chr7g0265111 24.330 522 323 14 4 490 35 519 2.23e-35 139
Msa1201160 MtrunA17_Chr6g0454261 24.008 529 308 17 5 490 7 484 2.67e-35 137
Msa1201160 MtrunA17_Chr4g0044501 25.245 511 305 14 6 484 8 473 3.67e-35 137
Msa1201160 MtrunA17_Chr5g0409591 32.197 264 144 7 208 454 212 457 3.80e-35 137
Msa1201160 MtrunA17_Chr5g0432731 27.879 330 184 9 165 483 7 293 6.20e-35 132
Msa1201160 MtrunA17_Chr8g0374901 32.192 292 157 9 205 479 204 471 6.42e-35 137
Msa1201160 MtrunA17_Chr8g0380531 25.875 514 292 16 4 488 6 459 6.50e-35 136
Msa1201160 MtrunA17_Chr6g0464921 25.249 503 295 18 8 488 11 454 1.07e-34 135
Msa1201160 MtrunA17_Chr7g0243911 34.615 234 118 6 246 469 5 213 1.11e-34 130
Msa1201160 MtrunA17_Chr7g0218311 28.710 411 216 13 109 488 121 485 1.85e-34 135
Msa1201160 MtrunA17_Chr7g0241781 27.536 483 261 19 5 471 6 415 2.01e-34 134
Msa1201160 MtrunA17_Chr3g0118661 26.316 513 294 16 8 484 13 477 2.15e-34 135
Msa1201160 MtrunA17_Chr6g0454131 29.552 335 168 11 170 484 190 476 2.49e-34 135
Msa1201160 MtrunA17_Chr6g0454141 24.715 526 308 18 5 490 7 484 2.82e-34 135
Msa1201160 MtrunA17_Chr6g0454351 25.984 508 294 21 5 484 9 462 3.05e-34 134
Msa1201160 MtrunA17_Chr5g0410941 23.883 515 326 12 1 488 16 491 3.14e-34 135
Msa1201160 MtrunA17_Chr4g0044481 27.356 435 244 14 4 422 23 401 3.59e-34 133
Msa1201160 MtrunA17_Chr8g0355011 26.716 408 209 14 98 490 34 366 6.07e-34 131
Msa1201160 MtrunA17_Chr3g0118721 28.616 318 175 9 176 484 13 287 1.11e-33 129
Msa1201160 MtrunA17_Chr6g0452771 27.317 410 227 12 101 484 113 477 1.72e-33 132
Msa1201160 MtrunA17_Chr2g0294941 29.078 282 158 8 205 469 106 362 2.04e-33 130
Msa1201160 MtrunA17_Chr2g0294921 25.000 516 305 18 1 479 153 623 2.18e-33 134
Msa1201160 MtrunA17_Chr7g0243611 36.161 224 104 6 206 418 76 271 2.42e-33 128
Msa1201160 MtrunA17_Chr8g0350881 30.928 291 162 8 205 479 206 473 2.97e-33 132
Msa1201160 MtrunA17_Chr3g0106251 30.640 297 159 8 185 475 27 282 4.12e-33 128
Msa1201160 MtrunA17_Chr2g0307961 27.255 499 278 13 8 475 13 457 4.67e-33 131
Msa1201160 MtrunA17_Chr1g0207931 30.690 290 157 8 209 488 244 499 6.83e-33 131
Msa1201160 MtrunA17_Chr7g0249981 25.000 512 284 17 8 487 25 468 7.76e-33 130
Msa1201160 MtrunA17_Chr6g0454271 30.195 308 158 11 197 490 27 291 1.24e-32 126
Msa1201160 MtrunA17_Chr3g0112761 25.749 501 299 16 1 483 1 446 1.24e-32 129
Msa1201160 MtrunA17_Chr6g0454121 28.182 330 179 11 170 484 190 476 2.19e-32 129
Msa1201160 MtrunA17_Chr8g0374931 25.103 486 304 16 18 477 21 472 4.36e-32 129
Msa1201160 MtrunA17_Chr3g0121991 26.604 530 290 20 8 496 79 550 5.47e-32 129
Msa1201160 MtrunA17_Chr3g0122001 27.429 525 291 21 8 495 6 477 7.33e-32 130
Msa1201160 MtrunA17_Chr3g0122001 26.408 515 295 19 8 486 486 952 6.11e-30 124
Msa1201160 MtrunA17_Chr7g0250001 25.605 496 292 17 8 483 6 444 7.67e-32 127
Msa1201160 MtrunA17_Chr1g0207981 27.520 367 207 12 125 475 138 461 1.25e-31 127
Msa1201160 MtrunA17_Chr8g0377921 25.591 508 283 17 6 475 2 452 1.25e-31 127
Msa1201160 MtrunA17_Chr5g0428081 25.444 507 312 17 1 479 4 472 1.52e-31 127
Msa1201160 MtrunA17_Chr6g0454221 32.895 228 112 6 261 484 38 228 1.85e-31 123
Msa1201160 MtrunA17_Chr7g0249961 32.759 232 119 5 258 487 65 261 8.28e-31 120
Msa1201160 MtrunA17_Chr6g0449991 31.339 351 203 8 8 353 6 323 9.41e-31 122
Msa1201160 MtrunA17_Chr8g0367221 28.056 499 263 19 1 462 1281 1720 1.10e-30 127
Msa1201160 MtrunA17_Chr8g0367221 24.790 476 284 18 2 450 792 1220 2.79e-27 116
Msa1201160 MtrunA17_Chr8g0367221 33.333 189 102 5 261 449 268 432 1.13e-23 105
Msa1201160 MtrunA17_Chr6g0454171 29.720 286 157 9 200 484 65 307 1.34e-30 121
Msa1201160 MtrunA17_Chr7g0241801 30.272 294 161 8 172 464 155 405 2.19e-30 123
Msa1201160 MtrunA17_Chr7g0218811 31.797 217 116 6 243 457 239 425 2.00e-29 120
Msa1201160 MtrunA17_Chr7g0218831 30.131 229 115 6 243 453 229 430 2.26e-29 120
Msa1201160 MtrunA17_Chr5g0416821 31.405 242 122 6 249 483 266 470 2.93e-29 120
Msa1201160 MtrunA17_Chr5g0412131 25.769 520 283 22 8 486 12 469 4.50e-29 119
Msa1201160 MtrunA17_Chr4g0069611 28.782 476 251 19 5 451 12 428 5.14e-29 119
Msa1201160 MtrunA17_Chr7g0218821 32.039 206 100 5 243 435 240 418 5.22e-29 119
Msa1201160 MtrunA17_Chr8g0377941 32.090 268 139 7 209 473 221 448 5.23e-29 119
Msa1201160 MtrunA17_Chr8g0334841 35.570 149 91 1 170 318 1 144 8.87e-29 112
Msa1201160 MtrunA17_Chr7g0218841 30.131 229 115 6 243 453 230 431 9.72e-29 118
Msa1201160 MtrunA17_Chr5g0412111 29.730 296 148 11 205 486 212 461 1.21e-28 118
Msa1201160 MtrunA17_Chr4g0029131 25.641 468 286 19 8 457 12 435 1.27e-28 120
Msa1201160 MtrunA17_Chr5g0393591 25.000 508 269 16 8 489 17 438 1.41e-28 118
Msa1201160 MtrunA17_Chr5g0412101 28.061 392 229 14 111 486 116 470 1.61e-28 118
Msa1201160 MtrunA17_Chr6g0454251 27.336 428 239 17 5 396 4 395 4.20e-28 115
Msa1201160 MtrunA17_Chr3g0118751 24.023 512 284 16 5 484 4 442 9.81e-28 115
Msa1201160 MtrunA17_Chr7g0231631 29.167 264 130 6 238 483 32 256 2.60e-27 110
Msa1201160 MtrunA17_Chr4g0072761 25.937 347 207 10 144 486 152 452 3.51e-27 114
Msa1201160 MtrunA17_Chr5g0442501 27.974 311 208 8 5 308 2 303 3.65e-27 111
Msa1201160 MtrunA17_Chr1g0196851 25.536 466 292 19 8 457 49 475 6.48e-27 114
Msa1201160 MtrunA17_Chr2g0278721 26.639 488 292 18 2 469 9 450 1.18e-26 114
Msa1201160 MtrunA17_Chr2g0278721 25.306 490 282 22 5 461 514 952 4.41e-23 103
Msa1201160 MtrunA17_Chr2g0278741 27.383 493 278 21 2 467 91 530 1.62e-26 113
Msa1201160 MtrunA17_Chr4g0072771 22.857 490 318 14 8 486 25 465 1.80e-26 112
Msa1201160 MtrunA17_Chr8g0337381 42.188 128 67 2 355 482 1 121 1.90e-26 104
Msa1201160 MtrunA17_Chr4g0039881 29.176 449 256 21 17 449 1 403 2.01e-26 111
Msa1201160 MtrunA17_Chr7g0218791 25.358 489 282 18 8 469 5 437 5.23e-26 110
Msa1201160 MtrunA17_Chr8g0336251 36.364 198 100 6 260 457 267 438 7.00e-26 110
Msa1201160 MtrunA17_Chr4g0040711 25.105 478 293 18 1 457 1 434 8.71e-26 110
Msa1201160 MtrunA17_Chr8g0336321 36.364 198 100 6 260 457 267 438 1.52e-25 109
Msa1201160 MtrunA17_Chr4g0040691 25.910 467 284 16 6 455 6 427 1.69e-25 109
Msa1201160 MtrunA17_Chr6g0454371 29.557 203 106 6 284 484 1 168 2.03e-25 102
Msa1201160 MtrunA17_Chr5g0427571 35.407 209 106 7 252 457 90 272 2.07e-25 106
Msa1201160 MtrunA17_Chr6g0466841 26.395 466 271 17 5 449 15 429 2.17e-25 108
Msa1201160 MtrunA17_Chr4g0066141 34.783 161 96 2 327 480 187 345 3.73e-25 106
Msa1201160 MtrunA17_Chr3g0079721 28.028 289 191 8 7 282 4 288 4.20e-25 105
Msa1201160 MtrunA17_Chr6g0464091 25.902 471 282 18 1 449 11 436 4.21e-25 108
Msa1201160 MtrunA17_Chr6g0466831 26.809 470 264 19 5 449 15 429 3.07e-24 105
Msa1201160 MtrunA17_Chr5g0431431 27.795 331 175 11 137 459 88 362 4.14e-24 103
Msa1201160 MtrunA17_Chr2g0302851 27.406 478 251 21 5 449 13 427 4.43e-24 105
Msa1201160 MtrunA17_Chr4g0029151 25.800 469 284 22 8 457 20 443 4.13e-22 99.4
Msa1201160 MtrunA17_Chr1g0207881 33.333 165 85 4 345 508 247 387 8.52e-22 97.4
Msa1201160 MtrunA17_Chr3g0092031 32.447 188 99 5 264 451 6 165 1.08e-21 93.2
Msa1201160 MtrunA17_Chr5g0448551 32.961 179 88 4 240 412 233 385 1.39e-21 97.4
Msa1201160 MtrunA17_Chr8g0357361 34.940 166 83 3 253 418 109 249 1.56e-21 94.4
Msa1201160 MtrunA17_Chr6g0454231 28.369 282 131 11 205 484 4 216 2.86e-21 96.7
Msa1201160 MtrunA17_Chr8g0336261 30.994 171 79 6 284 450 1 136 1.55e-20 87.8
Msa1201160 MtrunA17_Chr2g0319751 22.986 509 297 23 1 471 478 929 2.05e-19 92.0
Msa1201160 MtrunA17_Chr2g0319751 21.484 512 277 25 1 471 1 428 3.05e-15 79.0
Msa1201160 MtrunA17_Chr2g0283041 25.296 253 155 6 202 454 205 423 3.17e-19 90.5
Msa1201160 MtrunA17_Chr7g0243731 41.772 79 46 0 348 426 1 79 1.79e-18 80.1
Msa1201160 MtrunA17_Chr6g0469961 28.743 167 105 4 144 304 6 164 2.09e-17 79.7
Msa1201160 MtrunA17_Chr2g0319791 23.123 506 300 23 1 471 1 452 2.96e-17 84.3
Msa1201160 MtrunA17_Chr2g0319761 24.000 475 297 20 6 462 6 434 1.15e-16 82.4
Msa1201160 MtrunA17_Chr4g0029161 22.863 468 271 19 8 457 12 407 6.83e-16 79.7
Msa1201160 MtrunA17_Chr2g0319801 25.370 473 275 20 8 455 8 427 1.67e-15 79.0
Msa1201160 MtrunA17_Chr2g0319731 25.212 472 277 20 8 455 25 444 9.92e-15 76.6
Msa1201160 MtrunA17_Chr2g0321331 29.630 189 88 6 269 455 91 236 1.46e-13 71.2
Msa1201160 MtrunA17_Chr6g0453981 29.193 161 92 4 161 308 53 204 2.07e-12 67.0
Msa1201160 MtrunA17_Chr6g0453941 28.488 172 101 6 151 308 94 257 4.88e-12 66.6
Msa1201160 MtrunA17_Chr6g0477011 27.653 311 189 14 5 299 13 303 1.43e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1201160 AT2G18570.1 47.468 474 228 9 8 479 5 459 1.10e-150 439
Msa1201160 AT3G50740.1 40.702 484 270 10 1 482 1 469 1.00e-132 394
Msa1201160 AT5G26310.1 39.679 499 275 12 1 496 1 476 2.47e-127 380
Msa1201160 AT2G18560.1 48.731 394 181 9 92 484 1 374 7.68e-126 372
Msa1201160 AT5G66690.1 40.535 486 266 12 1 484 1 465 2.66e-123 370
Msa1201160 AT4G01070.1 39.059 489 265 12 1 482 1 463 5.34e-106 325
Msa1201160 AT1G01420.2 38.333 480 266 11 8 482 11 465 4.91e-105 323
Msa1201160 AT1G01420.1 38.333 480 266 11 8 482 8 462 5.45e-105 323
Msa1201160 AT1G01390.1 37.500 480 273 9 8 483 8 464 8.38e-102 314
Msa1201160 AT1G01390.2 37.500 480 273 9 8 483 25 481 1.17e-101 315
Msa1201160 AT4G36770.1 39.744 468 251 12 8 469 4 446 1.09e-99 308
Msa1201160 AT3G16520.3 33.402 485 281 11 9 484 6 457 6.97e-75 244
Msa1201160 AT3G16520.2 33.051 472 274 11 9 471 6 444 1.04e-70 233
Msa1201160 AT3G16520.1 33.051 472 274 11 9 471 6 444 1.19e-70 233
Msa1201160 AT2G29730.1 29.577 497 293 14 5 483 2 459 1.51e-65 219
Msa1201160 AT4G01070.2 35.674 356 207 7 1 351 1 339 7.15e-65 214
Msa1201160 AT1G07250.1 31.853 518 287 18 3 493 1 479 1.20e-63 215
Msa1201160 AT3G21790.1 32.432 518 274 19 8 489 4 481 1.42e-63 215
Msa1201160 AT3G21760.1 32.115 520 275 17 8 489 4 483 4.42e-62 211
Msa1201160 AT2G29710.1 29.697 495 295 15 5 483 2 459 1.70e-61 209
Msa1201160 AT3G21800.1 32.290 511 276 16 9 488 6 477 2.70e-60 206
Msa1201160 AT4G15280.1 30.874 515 284 19 8 490 4 478 2.50e-59 203
Msa1201160 AT4G15280.2 30.975 523 282 20 8 499 36 510 5.36e-59 203
Msa1201160 AT1G07260.1 30.178 507 281 18 7 483 5 468 2.52e-58 201
Msa1201160 AT2G29740.1 28.770 504 293 16 7 483 7 471 7.33e-58 199
Msa1201160 AT3G21750.1 30.769 494 294 16 8 484 4 466 1.01e-57 199
Msa1201160 AT3G21780.1 30.178 507 290 17 8 489 4 471 2.13e-56 196
Msa1201160 AT1G07240.1 29.537 518 295 17 5 491 2 480 1.27e-55 194
Msa1201160 AT2G29750.1 27.634 503 299 14 7 483 7 470 2.54e-55 193
Msa1201160 AT2G15490.1 29.693 522 278 20 8 487 7 481 1.03e-52 186
Msa1201160 AT4G15260.1 33.420 383 209 13 117 484 1 352 4.32e-52 181
Msa1201160 AT2G15490.3 29.502 522 276 20 8 487 7 478 1.23e-51 183
Msa1201160 AT2G15480.2 28.733 529 281 20 8 487 10 491 9.02e-51 181
Msa1201160 AT2G31790.1 29.709 515 276 16 1 487 1 457 6.54e-50 177
Msa1201160 AT2G15480.1 28.736 522 280 20 8 487 10 481 1.13e-49 177
Msa1201160 AT4G34131.1 29.310 522 282 22 2 484 4 477 1.62e-46 169
Msa1201160 AT2G36770.1 26.186 527 305 16 3 489 9 491 1.69e-45 166
Msa1201160 AT1G22400.1 26.400 500 284 17 5 468 11 462 2.46e-45 166
Msa1201160 AT3G53160.1 27.692 520 310 14 1 489 1 485 7.09e-45 165
Msa1201160 AT2G16890.2 28.231 503 297 18 8 488 9 469 7.39e-45 164
Msa1201160 AT5G12890.1 28.800 500 293 17 8 479 10 474 1.55e-44 164
Msa1201160 AT1G10400.1 28.854 506 290 20 1 483 1 459 2.26e-44 163
Msa1201160 AT1G51210.1 28.661 478 252 19 8 461 20 432 2.39e-44 162
Msa1201160 AT2G36780.1 27.553 519 292 18 8 486 14 488 2.46e-44 163
Msa1201160 AT2G30140.2 26.166 493 303 10 8 490 13 454 2.84e-44 162
Msa1201160 AT2G30140.1 26.113 494 303 10 8 490 13 455 4.00e-44 162
Msa1201160 AT2G36800.1 26.990 515 305 16 6 486 10 487 1.34e-43 161
Msa1201160 AT2G36970.1 26.494 502 298 19 5 480 8 464 2.99e-43 160
Msa1201160 AT1G78270.1 28.544 515 284 21 5 483 11 477 4.22e-43 160
Msa1201160 AT5G03490.1 27.202 511 283 16 5 488 16 464 1.00e-42 158
Msa1201160 AT2G36750.1 26.953 512 307 16 6 486 8 483 1.52e-42 158
Msa1201160 AT1G22360.1 25.806 496 286 16 8 468 10 458 2.30e-42 157
Msa1201160 AT4G34135.1 27.615 478 265 15 4 443 7 441 2.50e-42 157
Msa1201160 AT4G15480.1 31.398 379 211 11 109 475 126 467 8.20e-42 156
Msa1201160 AT1G22340.1 25.631 515 295 19 8 483 13 478 3.47e-41 154
Msa1201160 AT2G31750.1 27.470 506 283 19 7 486 7 454 5.16e-41 153
Msa1201160 AT2G31750.2 27.470 506 283 19 7 486 7 454 2.07e-40 152
Msa1201160 AT1G73880.1 27.432 514 288 19 7 488 13 473 2.58e-40 152
Msa1201160 AT1G05675.1 26.400 500 296 16 7 486 5 452 3.23e-40 151
Msa1201160 AT2G16890.3 28.132 455 267 15 8 441 9 424 3.59e-40 150
Msa1201160 AT1G22360.2 25.727 447 259 13 8 419 10 418 1.25e-39 150
Msa1201160 AT4G34138.1 27.723 505 280 21 8 475 11 467 1.62e-39 150
Msa1201160 AT2G36760.1 25.825 515 316 17 6 489 12 491 2.30e-39 149
Msa1201160 AT3G55700.1 28.600 500 287 19 1 483 1 447 8.38e-39 147
Msa1201160 AT5G59590.1 26.962 497 288 18 5 483 7 446 1.41e-38 146
Msa1201160 AT5G14860.1 26.796 515 298 17 8 488 8 477 3.76e-38 146
Msa1201160 AT1G24100.1 27.778 504 287 18 8 488 11 460 4.33e-38 145
Msa1201160 AT2G28080.1 28.457 376 214 12 111 475 128 459 9.65e-38 145
Msa1201160 AT3G46700.1 28.980 490 279 20 8 484 9 442 1.15e-37 144
Msa1201160 AT1G05680.1 26.096 502 295 18 7 486 5 452 1.34e-37 144
Msa1201160 AT5G05880.1 27.470 506 277 17 8 487 8 449 1.48e-37 144
Msa1201160 AT1G22380.1 24.597 496 292 16 8 468 13 461 2.46e-37 144
Msa1201160 AT5G05870.1 27.811 507 294 17 1 487 1 455 3.78e-37 143
Msa1201160 AT2G30150.2 26.148 501 291 15 8 488 13 454 8.31e-37 142
Msa1201160 AT3G53150.1 25.376 532 312 18 5 489 19 512 1.21e-36 142
Msa1201160 AT3G46680.1 33.910 289 147 10 202 486 201 449 1.93e-36 140
Msa1201160 AT3G21560.1 26.990 515 286 21 6 484 10 470 2.25e-36 141
Msa1201160 AT5G05890.1 27.677 495 294 18 8 487 8 453 2.60e-36 140
Msa1201160 AT5G59580.1 25.845 503 297 18 8 492 9 453 3.82e-36 140
Msa1201160 AT3G46670.1 28.112 498 275 22 8 483 9 445 4.89e-36 139
Msa1201160 AT3G46690.1 32.423 293 153 8 202 489 200 452 7.01e-36 139
Msa1201160 AT2G36790.1 26.654 514 307 15 6 486 11 487 7.42e-36 140
Msa1201160 AT1G22370.2 26.503 449 248 15 8 418 13 417 8.19e-36 139
Msa1201160 AT5G05900.1 26.575 508 292 18 1 487 1 448 2.29e-35 137
Msa1201160 AT2G43820.1 27.048 525 266 21 4 489 3 449 2.72e-35 137
Msa1201160 AT2G30150.1 25.911 494 287 15 15 488 4 438 3.03e-35 137
Msa1201160 AT2G43840.1 28.711 512 260 22 8 486 7 446 7.80e-35 136
Msa1201160 AT2G43840.2 28.210 514 260 21 8 486 7 446 2.17e-34 135
Msa1201160 AT3G46660.1 27.733 494 288 21 9 486 15 455 5.19e-34 134
Msa1201160 AT5G05860.1 26.337 486 290 13 8 479 9 440 5.98e-34 134
Msa1201160 AT3G11340.1 25.458 491 297 15 9 486 10 444 2.51e-33 132
Msa1201160 AT5G38010.1 25.845 503 290 17 8 486 10 453 7.32e-33 130
Msa1201160 AT4G15490.1 26.834 518 302 20 1 489 1 470 9.66e-33 130
Msa1201160 AT2G23260.1 25.562 489 289 12 7 475 9 442 1.66e-32 129
Msa1201160 AT3G55710.1 27.006 511 285 19 1 483 1 451 2.13e-32 129
Msa1201160 AT3G46720.1 28.514 498 275 22 9 489 10 443 3.46e-32 129
Msa1201160 AT5G65550.1 25.407 492 284 15 8 469 9 447 6.92e-32 128
Msa1201160 AT1G05560.1 25.631 515 310 13 6 498 3 466 7.34e-31 125
Msa1201160 AT4G14090.1 25.259 483 303 14 4 475 9 444 8.23e-31 125
Msa1201160 AT1G05560.2 25.631 515 310 13 6 498 53 516 1.32e-30 125
Msa1201160 AT3G46650.1 25.780 481 283 18 8 479 10 425 2.43e-30 123
Msa1201160 AT5G38040.1 30.208 288 151 9 206 486 205 449 3.39e-30 123
Msa1201160 AT1G22370.1 30.252 238 119 6 196 418 42 247 3.77e-30 120
Msa1201160 AT4G15550.1 27.038 503 295 18 8 483 13 470 5.55e-30 122
Msa1201160 AT2G26480.1 29.455 404 231 16 97 489 88 448 8.33e-29 119
Msa1201160 AT2G23250.1 26.727 333 195 8 163 486 143 435 9.60e-29 119
Msa1201160 AT1G06000.1 33.466 251 136 8 240 483 204 430 1.03e-28 118
Msa1201160 AT5G49690.1 26.250 480 271 17 8 462 10 431 1.17e-28 119
Msa1201160 AT4G15500.1 24.649 499 289 15 8 475 9 451 2.09e-28 118
Msa1201160 AT5G17050.1 24.652 503 313 16 2 486 6 460 4.38e-28 117
Msa1201160 AT1G05530.1 27.075 506 282 19 8 484 5 452 6.02e-28 116
Msa1201160 AT5G17030.1 31.295 278 139 11 205 476 214 445 1.27e-25 110
Msa1201160 AT1G30530.1 25.337 371 226 11 111 475 114 439 1.07e-23 104
Msa1201160 AT2G22590.1 24.324 481 289 16 8 462 15 446 1.93e-23 103
Msa1201160 AT3G02100.1 22.896 511 304 15 8 489 13 462 3.53e-23 102
Msa1201160 AT5G17040.2 31.818 242 121 9 241 476 124 327 6.06e-23 100
Msa1201160 AT5G54010.1 29.630 270 149 9 193 457 190 423 6.91e-23 101
Msa1201160 AT5G17040.1 31.818 242 121 9 241 476 226 429 8.04e-23 101
Msa1201160 AT5G37950.1 31.959 194 99 5 206 396 181 344 3.50e-22 98.2
Msa1201160 AT5G37950.2 31.959 194 99 5 206 396 175 338 3.62e-22 98.2
Msa1201160 AT4G27570.1 28.179 291 160 9 174 457 175 423 4.18e-22 99.4
Msa1201160 AT4G27560.1 31.081 222 124 6 240 457 227 423 5.54e-22 99.0
Msa1201160 AT3G29630.1 24.684 474 279 22 8 462 6 420 2.49e-21 97.1
Msa1201160 AT5G53990.1 31.304 230 125 7 240 464 221 422 3.47e-21 96.7
Msa1201160 AT1G64910.1 31.466 232 122 8 240 464 221 422 6.95e-21 95.9
Msa1201160 AT2G22930.1 28.413 271 155 10 193 457 180 417 1.07e-20 95.1
Msa1201160 AT3G29630.2 33.333 204 104 7 263 462 219 394 2.79e-20 93.6
Msa1201160 AT1G64920.1 24.096 332 211 9 167 492 155 451 2.04e-18 88.2
Msa1201160 AT4G09500.2 31.034 232 123 10 240 464 221 422 4.32e-18 87.0
Msa1201160 AT1G50580.1 27.778 270 157 9 200 464 187 423 7.68e-18 86.3
Msa1201160 AT4G09500.1 31.818 198 105 7 271 464 226 397 1.01e-17 85.9
Msa1201160 AT5G54060.1 26.848 257 152 6 207 458 218 443 1.35e-17 85.9
Msa1201160 AT3G22250.1 28.495 186 98 5 260 443 272 424 6.55e-17 83.6
Msa1201160 AT4G34135.2 24.927 341 203 12 4 310 7 328 8.53e-15 76.3
Msa1201160 AT2G16890.4 24.762 315 205 11 8 302 9 311 8.35e-12 66.6
Msa1201160 AT2G16890.1 24.762 315 205 11 8 302 9 311 8.35e-12 66.6

Find 156 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATCATTAAGTGCTTTA+AGG 0.120169 8_1:+54359394 None:intergenic
CGTGGTTGCTCTTCCCATTT+TGG 0.154711 8_1:+54358719 None:intergenic
TTTGGTGAGAAAGGTTATTT+TGG 0.236778 8_1:-54358746 Msa1201160:CDS
AAATGTTTGGTGATGGGATT+TGG 0.252930 8_1:+54359856 None:intergenic
CTTGCTTTCAAGCCCAGGCT+TGG 0.260156 8_1:-54360027 Msa1201160:CDS
GTCTGAAATTGTGGTGGATT+TGG 0.281687 8_1:+54359967 None:intergenic
CAGAAAACGTGGATGCTGTT+AGG 0.296832 8_1:-54358573 Msa1201160:CDS
CAAATGAAGGAAATAGCTTT+TGG 0.303622 8_1:-54359195 Msa1201160:CDS
GCTCTCATTGTCGACATATT+CGG 0.303837 8_1:-54359723 Msa1201160:CDS
ATTTCGGAATGTTGAGATCT+AGG 0.325190 8_1:+54359679 None:intergenic
GATAGCAAGTTTGGTGAGAA+AGG 0.326332 8_1:-54358755 Msa1201160:CDS
GTACAGAGTTAAAGAGGTTA+AGG 0.330032 8_1:-54358692 Msa1201160:CDS
GTGCAGACGGTGGCGGAGAC+GGG 0.330658 8_1:+54359822 None:intergenic
GTACGTGTACTCTCCTGTTT+TGG 0.335029 8_1:-54359619 Msa1201160:CDS
TAAAGCGGCCAAGCAATAAT+AGG 0.336903 8_1:+54358880 None:intergenic
GAGATTCAGTGTGTGAAGTT+TGG 0.337336 8_1:+54359922 None:intergenic
TTGCTTTCAAGCCCAGGCTT+GGG 0.348102 8_1:-54360026 Msa1201160:CDS
GAGGGAAGAGATAGCAAGTT+TGG 0.356548 8_1:-54358764 Msa1201160:CDS
TCAGTGGTTTATGTTTCGTT+TGG 0.359085 8_1:-54359243 Msa1201160:CDS
ATTAGATCAACCAAGTCATT+TGG 0.371760 8_1:+54359525 None:intergenic
GAGGATGAATGCGGCGTTGC+TGG 0.373328 8_1:-54358848 Msa1201160:CDS
GAAGCTACGTAAATGAATTT+CGG 0.373868 8_1:+54359663 None:intergenic
TGGATTTGTTTATCCAAAAC+AGG 0.374324 8_1:+54359606 None:intergenic
GTTTGTGAGTGCAGATTTGA+TGG 0.374674 8_1:+54359764 None:intergenic
CTGACTCGGCTTGTCTCACC+AGG 0.376002 8_1:+54359322 None:intergenic
TAAGTGAACAAAGATTTGTT+TGG 0.381560 8_1:-54359164 Msa1201160:CDS
CAGTGGTTTATGTTTCGTTT+GGG 0.384706 8_1:-54359242 Msa1201160:CDS
TCTGATCAATGTATGGTCCT+TGG 0.393469 8_1:+54359586 None:intergenic
ACATAAACCACTGATTCCTT+TGG 0.402236 8_1:+54359252 None:intergenic
AGATTCAGTGTGTGAAGTTT+GGG 0.415959 8_1:+54359923 None:intergenic
AAGTGAACAAAGATTTGTTT+GGG 0.417008 8_1:-54359163 Msa1201160:CDS
GGGAGGAAGGAGGAAATGTT+TGG 0.417638 8_1:+54359843 None:intergenic
GGCATGAGATGGCCCAAGCC+TGG 0.421031 8_1:+54360014 None:intergenic
GGTGCAGACGGTGGCGGAGA+CGG 0.421175 8_1:+54359821 None:intergenic
AGAAAACGTGGATGCTGTTA+GGG 0.423992 8_1:-54358572 Msa1201160:CDS
GGCGGAGACGGGGAGGAAGG+AGG 0.435030 8_1:+54359833 None:intergenic
CGTTTAGCTAGCTCGATGAT+AGG 0.437185 8_1:+54359993 None:intergenic
ACCTTGACTTGTTTCTGACT+CGG 0.441666 8_1:+54359308 None:intergenic
GGTTCTTTCTGATCAATGTA+TGG 0.444502 8_1:+54359579 None:intergenic
TGCAGACGGTGGCGGAGACG+GGG 0.447197 8_1:+54359823 None:intergenic
AAAGCACTTAATGATGAAGA+TGG 0.462019 8_1:-54359390 Msa1201160:CDS
TTTACGTAGCTTCACATGCT+TGG 0.464918 8_1:-54359653 Msa1201160:CDS
TGTATTTGCAGTTGGACCCC+TGG 0.467004 8_1:-54359340 Msa1201160:CDS
TGCAGAGAAAGCTTTGTGCC+AGG 0.470501 8_1:-54358665 Msa1201160:CDS
GGTGGCGGAGACGGGGAGGA+AGG 0.475208 8_1:+54359830 None:intergenic
ATCCCATGTGTTAACTAAGA+TGG 0.482794 8_1:+54359434 None:intergenic
GAGAATCAAGAATAAGAATG+TGG 0.484220 8_1:-54359019 Msa1201160:CDS
GAAAGAACCTATTAAAATCC+CGG 0.484996 8_1:-54359565 Msa1201160:CDS
TGGGTTTGTTAGTTCATGAA+TGG 0.486838 8_1:-54358999 Msa1201160:CDS
GAAGAATCAGCTGGTGGGGA+GGG 0.492082 8_1:-54358782 Msa1201160:CDS
TTTCGGAATGTTGAGATCTA+GGG 0.493410 8_1:+54359680 None:intergenic
AAAGTTCCTGTATTTGCAGT+TGG 0.494352 8_1:-54359348 Msa1201160:CDS
GGAAGCAGTGGTGACGGGTT+TGG 0.495407 8_1:-54359093 Msa1201160:CDS
AGGAGGAAATGTTTGGTGAT+GGG 0.496631 8_1:+54359850 None:intergenic
CTTTATACTCCAAGTTGGTC+CGG 0.497475 8_1:+54359496 None:intergenic
AAGCACTTAATGATGAAGAT+GGG 0.499382 8_1:-54359389 Msa1201160:CDS
AAGGAGGAAATGTTTGGTGA+TGG 0.503049 8_1:+54359849 None:intergenic
AGGGGTCCAACTGCAAATAC+AGG 0.503622 8_1:+54359342 None:intergenic
GTGGTCTTGCTTTCAAGCCC+AGG 0.510987 8_1:-54360032 Msa1201160:CDS
GAGATCTAGGGCTAAGGGTA+GGG 0.511383 8_1:+54359692 None:intergenic
GATGCGGGTGCAGACGGTGG+CGG 0.515438 8_1:+54359815 None:intergenic
AATGAGAGCGGAAGGTGGGA+GGG 0.516077 8_1:+54359737 None:intergenic
TATGTTTCGTTTGGGAGCGG+TGG 0.517432 8_1:-54359234 Msa1201160:CDS
TTTGTTTCACACTGTGGATG+GGG 0.517829 8_1:-54358934 Msa1201160:CDS
TGGTTGATCTAATGCTGGAC+CGG 0.520095 8_1:-54359515 Msa1201160:CDS
TATTGCTTGGCCGCTTTACG+CGG 0.521293 8_1:-54358875 Msa1201160:CDS
GCATGAGATGGCCCAAGCCT+GGG 0.521989 8_1:+54360015 None:intergenic
CCACTGGAAGCAGTGGTGAC+GGG 0.524244 8_1:-54359098 Msa1201160:CDS
TGCAGATTTGATGGAAGGTA+TGG 0.525881 8_1:+54359773 None:intergenic
ATGGATTGGTGGCTGCTTCG+AGG 0.527197 8_1:+54359895 None:intergenic
GTGTGAAACAAAACCACCTA+TGG 0.527219 8_1:+54358945 None:intergenic
ACGGTGTGCCTATTATTGCT+TGG 0.528160 8_1:-54358888 Msa1201160:CDS
GGCCGCTTTACGCGGAGCAG+AGG 0.528291 8_1:-54358867 Msa1201160:CDS
CCCACCAGCTGATTCTTCCT+CGG 0.528438 8_1:+54358787 None:intergenic
AATGCTGGACCGGACCAACT+TGG 0.528888 8_1:-54359505 Msa1201160:CDS
CAATGAGAGCGGAAGGTGGG+AGG 0.529033 8_1:+54359736 None:intergenic
GAATGCGGCGTTGCTGGTGG+AGG 0.529060 8_1:-54358842 Msa1201160:CDS
TGACTTGGTTGATCTAATGC+TGG 0.530697 8_1:-54359520 Msa1201160:CDS
ACCACTGGAAGCAGTGGTGA+CGG 0.531530 8_1:-54359099 Msa1201160:CDS
TTGAAACATCCTTCCATAGG+TGG 0.531580 8_1:-54358958 Msa1201160:CDS
TGGATGATGTTGTAGAGTGA+TGG 0.532998 8_1:+54359876 None:intergenic
CGCAGCGTCCACAGCTTCTG+TGG 0.533660 8_1:+54359128 None:intergenic
ATCAGTTCAACCAAATGACT+TGG 0.537368 8_1:-54359535 Msa1201160:CDS
AGAATCAAGAATAAGAATGT+GGG 0.537694 8_1:-54359018 Msa1201160:CDS
ATGAGAGCGGAAGGTGGGAG+GGG 0.538267 8_1:+54359738 None:intergenic
AATGTTGAGATCTAGGGCTA+AGG 0.539675 8_1:+54359686 None:intergenic
GTACCGAGTCTGTAATTCAA+TGG 0.541301 8_1:-54359287 Msa1201160:CDS
GCTGGTGGAGGAGCTTGGCA+TGG 0.542555 8_1:-54358830 Msa1201160:CDS
AAACAGGAGAGTACACGTAC+AGG 0.544760 8_1:+54359622 None:intergenic
GGGTTTGTTAGTTCATGAAT+GGG 0.547473 8_1:-54358998 Msa1201160:CDS
CGAGGAAGAATCAGCTGGTG+GGG 0.549438 8_1:-54358786 Msa1201160:CDS
GCGTTGCTGGTGGAGGAGCT+TGG 0.552578 8_1:-54358835 Msa1201160:CDS
GGTTGAACTGATTTACAACC+CGG 0.554325 8_1:+54359546 None:intergenic
AAAGAACCTATTAAAATCCC+GGG 0.560359 8_1:-54359564 Msa1201160:CDS
GGAAGAATCAGCTGGTGGGG+AGG 0.563505 8_1:-54358783 Msa1201160:CDS
GTTGTAGAGTGATGGATTGG+TGG 0.566062 8_1:+54359884 None:intergenic
GATGAACTTGATGATCAGAT+AGG 0.566730 8_1:-54359069 Msa1201160:CDS
TGAGATCTAGGGCTAAGGGT+AGG 0.566742 8_1:+54359691 None:intergenic
GCAGAGAAAGCTTTGTGCCA+GGG 0.567426 8_1:-54358664 Msa1201160:CDS
GAAAGCAAGACCACGTGTGT+TGG 0.567607 8_1:+54360041 None:intergenic
ATGTTGAGATCTAGGGCTAA+GGG 0.568728 8_1:+54359687 None:intergenic
GTGAGTGCAGATTTGATGGA+AGG 0.571046 8_1:+54359768 None:intergenic
CGTGAGGTACAGAGTTAAAG+AGG 0.571871 8_1:-54358698 Msa1201160:CDS
GTTTATGTTTCGTTTGGGAG+CGG 0.574120 8_1:-54359237 Msa1201160:CDS
ATTCTCTCTACAAACCCCTC+AGG 0.575324 8_1:+54359036 None:intergenic
ACGCATTGTTAGAAAGATGC+GGG 0.576140 8_1:+54359800 None:intergenic
CGACAATGAGAGCGGAAGGT+GGG 0.578158 8_1:+54359733 None:intergenic
TAGAAAGATGCGGGTGCAGA+CGG 0.579263 8_1:+54359809 None:intergenic
AACAGGAGAGTACACGTACA+GGG 0.580152 8_1:+54359623 None:intergenic
CCGAGGAAGAATCAGCTGGT+GGG 0.582919 8_1:-54358787 Msa1201160:CDS
ACGTGCGTCCACAGAAGCTG+TGG 0.586438 8_1:-54359136 Msa1201160:CDS
GATGTTGTAGAGTGATGGAT+TGG 0.587881 8_1:+54359881 None:intergenic
TGGCATGGCGGTGAAGACTA+CGG 0.591696 8_1:-54358815 Msa1201160:CDS
GTCTCCGAGGAAGAATCAGC+TGG 0.591708 8_1:-54358791 Msa1201160:CDS
GATGAATGCGGCGTTGCTGG+TGG 0.592792 8_1:-54358845 Msa1201160:CDS
CTTTAACTCTGTACCTCACG+TGG 0.594704 8_1:+54358701 None:intergenic
AGACGGTGGCGGAGACGGGG+AGG 0.595265 8_1:+54359826 None:intergenic
GTACTCTTTATACTCCAAGT+TGG 0.596134 8_1:+54359491 None:intergenic
AGCAATAATAGGCACACCGT+TGG 0.602836 8_1:+54358891 None:intergenic
ATAGGTAAACACTTACCTGA+GGG 0.603290 8_1:-54359051 Msa1201160:CDS
ATGTCGACAATGAGAGCGGA+AGG 0.603846 8_1:+54359729 None:intergenic
TGACTCGGCTTGTCTCACCA+GGG 0.605826 8_1:+54359323 None:intergenic
ATGGCTTGATAAACAACCAA+AGG 0.608472 8_1:-54359268 Msa1201160:CDS
TCCGAGGAAGAATCAGCTGG+TGG 0.609826 8_1:-54358788 Msa1201160:CDS
GCTCGATGATAGGCATGAGA+TGG 0.611212 8_1:+54360003 None:intergenic
GACGCATTGTTAGAAAGATG+CGG 0.615466 8_1:+54359799 None:intergenic
ATCCTCTGCTCCGCGTAAAG+CGG 0.615497 8_1:+54358865 None:intergenic
AGCACTTAATGATGAAGATG+GGG 0.616657 8_1:-54359388 Msa1201160:CDS
TTTGTCGTATGAGCAAATGA+AGG 0.617399 8_1:-54359208 Msa1201160:CDS
GTGTGAAGTTTGGGAAGTGA+TGG 0.619275 8_1:+54359932 None:intergenic
ACGCCATCTTAGTTAACACA+TGG 0.619477 8_1:-54359437 Msa1201160:CDS
TAAACAACCAAAGGAATCAG+TGG 0.621380 8_1:-54359259 Msa1201160:CDS
TTGTGAGTCTGAAATTGTGG+TGG 0.624637 8_1:+54359961 None:intergenic
GACTCGGCTTGTCTCACCAG+GGG 0.627326 8_1:+54359324 None:intergenic
GAATTGTGAGTCTGAAATTG+TGG 0.627417 8_1:+54359958 None:intergenic
AAAGATGCGGGTGCAGACGG+TGG 0.632062 8_1:+54359812 None:intergenic
CCCGTCACCACTGCTTCCAG+TGG 0.633826 8_1:+54359098 None:intergenic
GAAACAAAACCACCTATGGA+AGG 0.638597 8_1:+54358949 None:intergenic
GAGAAAGCTTTGTGCCAGGG+TGG 0.639350 8_1:-54358661 Msa1201160:CDS
GAATATGTCGACAATGAGAG+CGG 0.641103 8_1:+54359725 None:intergenic
CAGTATAAGACGAACCACCC+TGG 0.642281 8_1:+54358647 None:intergenic
TCGACAATGAGAGCGGAAGG+TGG 0.643129 8_1:+54359732 None:intergenic
ATGGGAAGAGCAACCACGTG+AGG 0.649962 8_1:-54358714 Msa1201160:CDS
TGTTTCAAAACAGTTACTTG+TGG 0.658118 8_1:+54358973 None:intergenic
CGCCATCTTAGTTAACACAT+GGG 0.662056 8_1:-54359436 Msa1201160:CDS
GTGCTTGAGAGTTTAACCAA+CGG 0.662585 8_1:-54358907 Msa1201160:CDS
GGTGGAGGAGCTTGGCATGG+CGG 0.666532 8_1:-54358827 Msa1201160:CDS
GCCGAGTCAGAAACAAGTCA+AGG 0.669483 8_1:-54359309 Msa1201160:CDS
GATAGGTAAACACTTACCTG+AGG 0.669812 8_1:-54359052 Msa1201160:CDS
GTTGAACTGATTTACAACCC+GGG 0.676481 8_1:+54359547 None:intergenic
TAGGTAAACACTTACCTGAG+GGG 0.692841 8_1:-54359050 Msa1201160:CDS
TGTTTGTGTTTCAGAAAACG+TGG 0.693155 8_1:-54358584 Msa1201160:CDS
CGCGGAGCAGAGGATGAATG+CGG 0.693313 8_1:-54358857 Msa1201160:CDS
TTTGTACAAGCCAACACACG+TGG 0.696829 8_1:-54360051 Msa1201160:CDS
AAGCCATTGAATTACAGACT+CGG 0.698525 8_1:+54359284 None:intergenic
TGAAGACTACGGTGTCTCCG+AGG 0.698802 8_1:-54358804 Msa1201160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGTGAACAAAGATTTGTT+TGG - chr8_1:54359438-54359457 Msa1201160:CDS 25.0%
!! AAGTGAACAAAGATTTGTTT+GGG - chr8_1:54359439-54359458 Msa1201160:CDS 25.0%
! AGAATCAAGAATAAGAATGT+GGG - chr8_1:54359584-54359603 Msa1201160:CDS 25.0%
!! TAAGTGAACAAAGATTTGTT+TGG - chr8_1:54359438-54359457 Msa1201160:CDS 25.0%
!! AAGTGAACAAAGATTTGTTT+GGG - chr8_1:54359439-54359458 Msa1201160:CDS 25.0%
! AGAATCAAGAATAAGAATGT+GGG - chr8_1:54359584-54359603 Msa1201160:CDS 25.0%
GAAGCTACGTAAATGAATTT+CGG + chr8_1:54358942-54358961 None:intergenic 30.0%
! TGGATTTGTTTATCCAAAAC+AGG + chr8_1:54358999-54359018 None:intergenic 30.0%
!! GTTTTGGATAAACAAATCCA+AGG - chr8_1:54358999-54359018 Msa1201160:CDS 30.0%
GAAAGAACCTATTAAAATCC+CGG - chr8_1:54359037-54359056 Msa1201160:CDS 30.0%
AAAGAACCTATTAAAATCCC+GGG - chr8_1:54359038-54359057 Msa1201160:CDS 30.0%
ATTAGATCAACCAAGTCATT+TGG + chr8_1:54359080-54359099 None:intergenic 30.0%
CTTCATCATTAAGTGCTTTA+AGG + chr8_1:54359211-54359230 None:intergenic 30.0%
! AAAGCACTTAATGATGAAGA+TGG - chr8_1:54359212-54359231 Msa1201160:CDS 30.0%
AAGCACTTAATGATGAAGAT+GGG - chr8_1:54359213-54359232 Msa1201160:CDS 30.0%
! CAAATGAAGGAAATAGCTTT+TGG - chr8_1:54359407-54359426 Msa1201160:CDS 30.0%
GAGAATCAAGAATAAGAATG+TGG - chr8_1:54359583-54359602 Msa1201160:CDS 30.0%
TGTTTCAAAACAGTTACTTG+TGG + chr8_1:54359632-54359651 None:intergenic 30.0%
! TTTGGTGAGAAAGGTTATTT+TGG - chr8_1:54359856-54359875 Msa1201160:CDS 30.0%
!!! TTATTTTGGTGGACCAAAAT+GGG - chr8_1:54359870-54359889 Msa1201160:CDS 30.0%
GAAGCTACGTAAATGAATTT+CGG + chr8_1:54358942-54358961 None:intergenic 30.0%
! TGGATTTGTTTATCCAAAAC+AGG + chr8_1:54358999-54359018 None:intergenic 30.0%
!! GTTTTGGATAAACAAATCCA+AGG - chr8_1:54358999-54359018 Msa1201160:CDS 30.0%
GAAAGAACCTATTAAAATCC+CGG - chr8_1:54359037-54359056 Msa1201160:CDS 30.0%
AAAGAACCTATTAAAATCCC+GGG - chr8_1:54359038-54359057 Msa1201160:CDS 30.0%
ATTAGATCAACCAAGTCATT+TGG + chr8_1:54359080-54359099 None:intergenic 30.0%
CTTCATCATTAAGTGCTTTA+AGG + chr8_1:54359211-54359230 None:intergenic 30.0%
! AAAGCACTTAATGATGAAGA+TGG - chr8_1:54359212-54359231 Msa1201160:CDS 30.0%
AAGCACTTAATGATGAAGAT+GGG - chr8_1:54359213-54359232 Msa1201160:CDS 30.0%
! CAAATGAAGGAAATAGCTTT+TGG - chr8_1:54359407-54359426 Msa1201160:CDS 30.0%
GAGAATCAAGAATAAGAATG+TGG - chr8_1:54359583-54359602 Msa1201160:CDS 30.0%
TGTTTCAAAACAGTTACTTG+TGG + chr8_1:54359632-54359651 None:intergenic 30.0%
! TTTGGTGAGAAAGGTTATTT+TGG - chr8_1:54359856-54359875 Msa1201160:CDS 30.0%
!!! TTATTTTGGTGGACCAAAAT+GGG - chr8_1:54359870-54359889 Msa1201160:CDS 30.0%
! GAATTGTGAGTCTGAAATTG+TGG + chr8_1:54358647-54358666 None:intergenic 35.0%
AGATTCAGTGTGTGAAGTTT+GGG + chr8_1:54358682-54358701 None:intergenic 35.0%
!! AAATGTTTGGTGATGGGATT+TGG + chr8_1:54358749-54358768 None:intergenic 35.0%
TTTCGGAATGTTGAGATCTA+GGG + chr8_1:54358925-54358944 None:intergenic 35.0%
ATTTCGGAATGTTGAGATCT+AGG + chr8_1:54358926-54358945 None:intergenic 35.0%
GGTTCTTTCTGATCAATGTA+TGG + chr8_1:54359026-54359045 None:intergenic 35.0%
!! TTACAACCCGGGATTTTAAT+AGG + chr8_1:54359047-54359066 None:intergenic 35.0%
ATCAGTTCAACCAAATGACT+TGG - chr8_1:54359067-54359086 Msa1201160:CDS 35.0%
GTACTCTTTATACTCCAAGT+TGG + chr8_1:54359114-54359133 None:intergenic 35.0%
ATCCCATGTGTTAACTAAGA+TGG + chr8_1:54359171-54359190 None:intergenic 35.0%
AGCACTTAATGATGAAGATG+GGG - chr8_1:54359214-54359233 Msa1201160:CDS 35.0%
AAAGTTCCTGTATTTGCAGT+TGG - chr8_1:54359254-54359273 Msa1201160:CDS 35.0%
AAGCCATTGAATTACAGACT+CGG + chr8_1:54359321-54359340 None:intergenic 35.0%
ATGGCTTGATAAACAACCAA+AGG - chr8_1:54359334-54359353 Msa1201160:CDS 35.0%
TAAACAACCAAAGGAATCAG+TGG - chr8_1:54359343-54359362 Msa1201160:CDS 35.0%
!! ACATAAACCACTGATTCCTT+TGG + chr8_1:54359353-54359372 None:intergenic 35.0%
TCAGTGGTTTATGTTTCGTT+TGG - chr8_1:54359359-54359378 Msa1201160:CDS 35.0%
CAGTGGTTTATGTTTCGTTT+GGG - chr8_1:54359360-54359379 Msa1201160:CDS 35.0%
TTTGTCGTATGAGCAAATGA+AGG - chr8_1:54359394-54359413 Msa1201160:CDS 35.0%
! GATGAACTTGATGATCAGAT+AGG - chr8_1:54359533-54359552 Msa1201160:CDS 35.0%
ATAGGTAAACACTTACCTGA+GGG - chr8_1:54359551-54359570 Msa1201160:CDS 35.0%
!! TGGGTTTGTTAGTTCATGAA+TGG - chr8_1:54359603-54359622 Msa1201160:CDS 35.0%
!! GGGTTTGTTAGTTCATGAAT+GGG - chr8_1:54359604-54359623 Msa1201160:CDS 35.0%
!!! GTTTTGAAACATCCTTCCAT+AGG - chr8_1:54359641-54359660 Msa1201160:CDS 35.0%
!! TTTTGTTTCACACTGTGGAT+GGG - chr8_1:54359667-54359686 Msa1201160:CDS 35.0%
!!! GTTATTTTGGTGGACCAAAA+TGG - chr8_1:54359869-54359888 Msa1201160:CDS 35.0%
GTACAGAGTTAAAGAGGTTA+AGG - chr8_1:54359910-54359929 Msa1201160:CDS 35.0%
TGTTTGTGTTTCAGAAAACG+TGG - chr8_1:54360018-54360037 Msa1201160:CDS 35.0%
! GAATTGTGAGTCTGAAATTG+TGG + chr8_1:54358647-54358666 None:intergenic 35.0%
AGATTCAGTGTGTGAAGTTT+GGG + chr8_1:54358682-54358701 None:intergenic 35.0%
!! AAATGTTTGGTGATGGGATT+TGG + chr8_1:54358749-54358768 None:intergenic 35.0%
TTTCGGAATGTTGAGATCTA+GGG + chr8_1:54358925-54358944 None:intergenic 35.0%
ATTTCGGAATGTTGAGATCT+AGG + chr8_1:54358926-54358945 None:intergenic 35.0%
GGTTCTTTCTGATCAATGTA+TGG + chr8_1:54359026-54359045 None:intergenic 35.0%
!! TTACAACCCGGGATTTTAAT+AGG + chr8_1:54359047-54359066 None:intergenic 35.0%
ATCAGTTCAACCAAATGACT+TGG - chr8_1:54359067-54359086 Msa1201160:CDS 35.0%
GTACTCTTTATACTCCAAGT+TGG + chr8_1:54359114-54359133 None:intergenic 35.0%
ATCCCATGTGTTAACTAAGA+TGG + chr8_1:54359171-54359190 None:intergenic 35.0%
AGCACTTAATGATGAAGATG+GGG - chr8_1:54359214-54359233 Msa1201160:CDS 35.0%
AAAGTTCCTGTATTTGCAGT+TGG - chr8_1:54359254-54359273 Msa1201160:CDS 35.0%
AAGCCATTGAATTACAGACT+CGG + chr8_1:54359321-54359340 None:intergenic 35.0%
ATGGCTTGATAAACAACCAA+AGG - chr8_1:54359334-54359353 Msa1201160:CDS 35.0%
TAAACAACCAAAGGAATCAG+TGG - chr8_1:54359343-54359362 Msa1201160:CDS 35.0%
!! ACATAAACCACTGATTCCTT+TGG + chr8_1:54359353-54359372 None:intergenic 35.0%
TCAGTGGTTTATGTTTCGTT+TGG - chr8_1:54359359-54359378 Msa1201160:CDS 35.0%
CAGTGGTTTATGTTTCGTTT+GGG - chr8_1:54359360-54359379 Msa1201160:CDS 35.0%
TTTGTCGTATGAGCAAATGA+AGG - chr8_1:54359394-54359413 Msa1201160:CDS 35.0%
! GATGAACTTGATGATCAGAT+AGG - chr8_1:54359533-54359552 Msa1201160:CDS 35.0%
ATAGGTAAACACTTACCTGA+GGG - chr8_1:54359551-54359570 Msa1201160:CDS 35.0%
!! TGGGTTTGTTAGTTCATGAA+TGG - chr8_1:54359603-54359622 Msa1201160:CDS 35.0%
!! GGGTTTGTTAGTTCATGAAT+GGG - chr8_1:54359604-54359623 Msa1201160:CDS 35.0%
!!! GTTTTGAAACATCCTTCCAT+AGG - chr8_1:54359641-54359660 Msa1201160:CDS 35.0%
!! TTTTGTTTCACACTGTGGAT+GGG - chr8_1:54359667-54359686 Msa1201160:CDS 35.0%
!!! GTTATTTTGGTGGACCAAAA+TGG - chr8_1:54359869-54359888 Msa1201160:CDS 35.0%
GTACAGAGTTAAAGAGGTTA+AGG - chr8_1:54359910-54359929 Msa1201160:CDS 35.0%
TGTTTGTGTTTCAGAAAACG+TGG - chr8_1:54360018-54360037 Msa1201160:CDS 35.0%
!! GTCTGAAATTGTGGTGGATT+TGG + chr8_1:54358638-54358657 None:intergenic 40.0%
! TTGTGAGTCTGAAATTGTGG+TGG + chr8_1:54358644-54358663 None:intergenic 40.0%
GAGATTCAGTGTGTGAAGTT+TGG + chr8_1:54358683-54358702 None:intergenic 40.0%
!! GATGTTGTAGAGTGATGGAT+TGG + chr8_1:54358724-54358743 None:intergenic 40.0%
TGGATGATGTTGTAGAGTGA+TGG + chr8_1:54358729-54358748 None:intergenic 40.0%
! AGGAGGAAATGTTTGGTGAT+GGG + chr8_1:54358755-54358774 None:intergenic 40.0%
! AAGGAGGAAATGTTTGGTGA+TGG + chr8_1:54358756-54358775 None:intergenic 40.0%
ACGCATTGTTAGAAAGATGC+GGG + chr8_1:54358805-54358824 None:intergenic 40.0%
GACGCATTGTTAGAAAGATG+CGG + chr8_1:54358806-54358825 None:intergenic 40.0%
TGCAGATTTGATGGAAGGTA+TGG + chr8_1:54358832-54358851 None:intergenic 40.0%
GTTTGTGAGTGCAGATTTGA+TGG + chr8_1:54358841-54358860 None:intergenic 40.0%
GAATATGTCGACAATGAGAG+CGG + chr8_1:54358880-54358899 None:intergenic 40.0%
GCTCTCATTGTCGACATATT+CGG - chr8_1:54358879-54358898 Msa1201160:CDS 40.0%
! ATGTTGAGATCTAGGGCTAA+GGG + chr8_1:54358918-54358937 None:intergenic 40.0%
! AATGTTGAGATCTAGGGCTA+AGG + chr8_1:54358919-54358938 None:intergenic 40.0%
TTTACGTAGCTTCACATGCT+TGG - chr8_1:54358949-54358968 Msa1201160:CDS 40.0%
TCTGATCAATGTATGGTCCT+TGG + chr8_1:54359019-54359038 None:intergenic 40.0%
! GTTGAACTGATTTACAACCC+GGG + chr8_1:54359058-54359077 None:intergenic 40.0%
! GGTTGAACTGATTTACAACC+CGG + chr8_1:54359059-54359078 None:intergenic 40.0%
!! TGACTTGGTTGATCTAATGC+TGG - chr8_1:54359082-54359101 Msa1201160:CDS 40.0%
!! CTTTATACTCCAAGTTGGTC+CGG + chr8_1:54359109-54359128 None:intergenic 40.0%
! TTTCGAGAAGTTTTTCGCTG+CGG + chr8_1:54359141-54359160 None:intergenic 40.0%
ACGCCATCTTAGTTAACACA+TGG - chr8_1:54359165-54359184 Msa1201160:CDS 40.0%
CGCCATCTTAGTTAACACAT+GGG - chr8_1:54359166-54359185 Msa1201160:CDS 40.0%
!! ACCTTGACTTGTTTCTGACT+CGG + chr8_1:54359297-54359316 None:intergenic 40.0%
GTACCGAGTCTGTAATTCAA+TGG - chr8_1:54359315-54359334 Msa1201160:CDS 40.0%
GTTTATGTTTCGTTTGGGAG+CGG - chr8_1:54359365-54359384 Msa1201160:CDS 40.0%
GATAGGTAAACACTTACCTG+AGG - chr8_1:54359550-54359569 Msa1201160:CDS 40.0%
TAGGTAAACACTTACCTGAG+GGG - chr8_1:54359552-54359571 Msa1201160:CDS 40.0%
TTGAAACATCCTTCCATAGG+TGG - chr8_1:54359644-54359663 Msa1201160:CDS 40.0%
GAAACAAAACCACCTATGGA+AGG + chr8_1:54359656-54359675 None:intergenic 40.0%
GTGTGAAACAAAACCACCTA+TGG + chr8_1:54359660-54359679 None:intergenic 40.0%
!!! GTTTTGTTTCACACTGTGGA+TGG - chr8_1:54359666-54359685 Msa1201160:CDS 40.0%
TTTGTTTCACACTGTGGATG+GGG - chr8_1:54359668-54359687 Msa1201160:CDS 40.0%
GTGCTTGAGAGTTTAACCAA+CGG - chr8_1:54359695-54359714 Msa1201160:CDS 40.0%
TAAAGCGGCCAAGCAATAAT+AGG + chr8_1:54359725-54359744 None:intergenic 40.0%
! GATAGCAAGTTTGGTGAGAA+AGG - chr8_1:54359847-54359866 Msa1201160:CDS 40.0%
!!! GGTGAGAAAGGTTATTTTGG+TGG - chr8_1:54359859-54359878 Msa1201160:CDS 40.0%
AGAAAACGTGGATGCTGTTA+GGG - chr8_1:54360030-54360049 Msa1201160:CDS 40.0%
!! GTCTGAAATTGTGGTGGATT+TGG + chr8_1:54358638-54358657 None:intergenic 40.0%
! TTGTGAGTCTGAAATTGTGG+TGG + chr8_1:54358644-54358663 None:intergenic 40.0%
GAGATTCAGTGTGTGAAGTT+TGG + chr8_1:54358683-54358702 None:intergenic 40.0%
!! GATGTTGTAGAGTGATGGAT+TGG + chr8_1:54358724-54358743 None:intergenic 40.0%
TGGATGATGTTGTAGAGTGA+TGG + chr8_1:54358729-54358748 None:intergenic 40.0%
! AGGAGGAAATGTTTGGTGAT+GGG + chr8_1:54358755-54358774 None:intergenic 40.0%
! AAGGAGGAAATGTTTGGTGA+TGG + chr8_1:54358756-54358775 None:intergenic 40.0%
ACGCATTGTTAGAAAGATGC+GGG + chr8_1:54358805-54358824 None:intergenic 40.0%
GACGCATTGTTAGAAAGATG+CGG + chr8_1:54358806-54358825 None:intergenic 40.0%
TGCAGATTTGATGGAAGGTA+TGG + chr8_1:54358832-54358851 None:intergenic 40.0%
GTTTGTGAGTGCAGATTTGA+TGG + chr8_1:54358841-54358860 None:intergenic 40.0%
GAATATGTCGACAATGAGAG+CGG + chr8_1:54358880-54358899 None:intergenic 40.0%
GCTCTCATTGTCGACATATT+CGG - chr8_1:54358879-54358898 Msa1201160:CDS 40.0%
! ATGTTGAGATCTAGGGCTAA+GGG + chr8_1:54358918-54358937 None:intergenic 40.0%
! AATGTTGAGATCTAGGGCTA+AGG + chr8_1:54358919-54358938 None:intergenic 40.0%
TTTACGTAGCTTCACATGCT+TGG - chr8_1:54358949-54358968 Msa1201160:CDS 40.0%
TCTGATCAATGTATGGTCCT+TGG + chr8_1:54359019-54359038 None:intergenic 40.0%
! GTTGAACTGATTTACAACCC+GGG + chr8_1:54359058-54359077 None:intergenic 40.0%
! GGTTGAACTGATTTACAACC+CGG + chr8_1:54359059-54359078 None:intergenic 40.0%
!! TGACTTGGTTGATCTAATGC+TGG - chr8_1:54359082-54359101 Msa1201160:CDS 40.0%
!! CTTTATACTCCAAGTTGGTC+CGG + chr8_1:54359109-54359128 None:intergenic 40.0%
! TTTCGAGAAGTTTTTCGCTG+CGG + chr8_1:54359141-54359160 None:intergenic 40.0%
ACGCCATCTTAGTTAACACA+TGG - chr8_1:54359165-54359184 Msa1201160:CDS 40.0%
CGCCATCTTAGTTAACACAT+GGG - chr8_1:54359166-54359185 Msa1201160:CDS 40.0%
!! ACCTTGACTTGTTTCTGACT+CGG + chr8_1:54359297-54359316 None:intergenic 40.0%
GTACCGAGTCTGTAATTCAA+TGG - chr8_1:54359315-54359334 Msa1201160:CDS 40.0%
GTTTATGTTTCGTTTGGGAG+CGG - chr8_1:54359365-54359384 Msa1201160:CDS 40.0%
GATAGGTAAACACTTACCTG+AGG - chr8_1:54359550-54359569 Msa1201160:CDS 40.0%
TAGGTAAACACTTACCTGAG+GGG - chr8_1:54359552-54359571 Msa1201160:CDS 40.0%
TTGAAACATCCTTCCATAGG+TGG - chr8_1:54359644-54359663 Msa1201160:CDS 40.0%
GAAACAAAACCACCTATGGA+AGG + chr8_1:54359656-54359675 None:intergenic 40.0%
GTGTGAAACAAAACCACCTA+TGG + chr8_1:54359660-54359679 None:intergenic 40.0%
!!! GTTTTGTTTCACACTGTGGA+TGG - chr8_1:54359666-54359685 Msa1201160:CDS 40.0%
TTTGTTTCACACTGTGGATG+GGG - chr8_1:54359668-54359687 Msa1201160:CDS 40.0%
GTGCTTGAGAGTTTAACCAA+CGG - chr8_1:54359695-54359714 Msa1201160:CDS 40.0%
TAAAGCGGCCAAGCAATAAT+AGG + chr8_1:54359725-54359744 None:intergenic 40.0%
! GATAGCAAGTTTGGTGAGAA+AGG - chr8_1:54359847-54359866 Msa1201160:CDS 40.0%
!!! GGTGAGAAAGGTTATTTTGG+TGG - chr8_1:54359859-54359878 Msa1201160:CDS 40.0%
AGAAAACGTGGATGCTGTTA+GGG - chr8_1:54360030-54360049 Msa1201160:CDS 40.0%
TTTGTACAAGCCAACACACG+TGG - chr8_1:54358551-54358570 Msa1201160:CDS 45.0%
CGTTTAGCTAGCTCGATGAT+AGG + chr8_1:54358612-54358631 None:intergenic 45.0%
GTGTGAAGTTTGGGAAGTGA+TGG + chr8_1:54358673-54358692 None:intergenic 45.0%
!! GTTGTAGAGTGATGGATTGG+TGG + chr8_1:54358721-54358740 None:intergenic 45.0%
GTGAGTGCAGATTTGATGGA+AGG + chr8_1:54358837-54358856 None:intergenic 45.0%
! AACAGGAGAGTACACGTACA+GGG + chr8_1:54358982-54359001 None:intergenic 45.0%
! AAACAGGAGAGTACACGTAC+AGG + chr8_1:54358983-54359002 None:intergenic 45.0%
! GTACGTGTACTCTCCTGTTT+TGG - chr8_1:54358983-54359002 Msa1201160:CDS 45.0%
TGGTTGATCTAATGCTGGAC+CGG - chr8_1:54359087-54359106 Msa1201160:CDS 45.0%
! TTTTTCACCACTGGAAGCAG+TGG - chr8_1:54359497-54359516 Msa1201160:CDS 45.0%
ATTCTCTCTACAAACCCCTC+AGG + chr8_1:54359569-54359588 None:intergenic 45.0%
!!! GGTGGTTTTGTTTCACACTG+TGG - chr8_1:54359662-54359681 Msa1201160:CDS 45.0%
AGCAATAATAGGCACACCGT+TGG + chr8_1:54359714-54359733 None:intergenic 45.0%
ACGGTGTGCCTATTATTGCT+TGG - chr8_1:54359714-54359733 Msa1201160:CDS 45.0%
GAGGGAAGAGATAGCAAGTT+TGG - chr8_1:54359838-54359857 Msa1201160:CDS 45.0%
CTTTAACTCTGTACCTCACG+TGG + chr8_1:54359904-54359923 None:intergenic 45.0%
CGTGAGGTACAGAGTTAAAG+AGG - chr8_1:54359904-54359923 Msa1201160:CDS 45.0%
CAGAAAACGTGGATGCTGTT+AGG - chr8_1:54360029-54360048 Msa1201160:CDS 45.0%
TTTGTACAAGCCAACACACG+TGG - chr8_1:54358551-54358570 Msa1201160:CDS 45.0%
CGTTTAGCTAGCTCGATGAT+AGG + chr8_1:54358612-54358631 None:intergenic 45.0%
GTGTGAAGTTTGGGAAGTGA+TGG + chr8_1:54358673-54358692 None:intergenic 45.0%
!! GTTGTAGAGTGATGGATTGG+TGG + chr8_1:54358721-54358740 None:intergenic 45.0%
GTGAGTGCAGATTTGATGGA+AGG + chr8_1:54358837-54358856 None:intergenic 45.0%
! AACAGGAGAGTACACGTACA+GGG + chr8_1:54358982-54359001 None:intergenic 45.0%
! AAACAGGAGAGTACACGTAC+AGG + chr8_1:54358983-54359002 None:intergenic 45.0%
! GTACGTGTACTCTCCTGTTT+TGG - chr8_1:54358983-54359002 Msa1201160:CDS 45.0%
TGGTTGATCTAATGCTGGAC+CGG - chr8_1:54359087-54359106 Msa1201160:CDS 45.0%
! TTTTTCACCACTGGAAGCAG+TGG - chr8_1:54359497-54359516 Msa1201160:CDS 45.0%
ATTCTCTCTACAAACCCCTC+AGG + chr8_1:54359569-54359588 None:intergenic 45.0%
!!! GGTGGTTTTGTTTCACACTG+TGG - chr8_1:54359662-54359681 Msa1201160:CDS 45.0%
AGCAATAATAGGCACACCGT+TGG + chr8_1:54359714-54359733 None:intergenic 45.0%
ACGGTGTGCCTATTATTGCT+TGG - chr8_1:54359714-54359733 Msa1201160:CDS 45.0%
GAGGGAAGAGATAGCAAGTT+TGG - chr8_1:54359838-54359857 Msa1201160:CDS 45.0%
CTTTAACTCTGTACCTCACG+TGG + chr8_1:54359904-54359923 None:intergenic 45.0%
CGTGAGGTACAGAGTTAAAG+AGG - chr8_1:54359904-54359923 Msa1201160:CDS 45.0%
CAGAAAACGTGGATGCTGTT+AGG - chr8_1:54360029-54360048 Msa1201160:CDS 45.0%
GAAAGCAAGACCACGTGTGT+TGG + chr8_1:54358564-54358583 None:intergenic 50.0%
TTGCTTTCAAGCCCAGGCTT+GGG - chr8_1:54358576-54358595 Msa1201160:CDS 50.0%
GCTCGATGATAGGCATGAGA+TGG + chr8_1:54358602-54358621 None:intergenic 50.0%
GGGAGGAAGGAGGAAATGTT+TGG + chr8_1:54358762-54358781 None:intergenic 50.0%
TAGAAAGATGCGGGTGCAGA+CGG + chr8_1:54358796-54358815 None:intergenic 50.0%
ATGTCGACAATGAGAGCGGA+AGG + chr8_1:54358876-54358895 None:intergenic 50.0%
! GAGATCTAGGGCTAAGGGTA+GGG + chr8_1:54358913-54358932 None:intergenic 50.0%
! TGAGATCTAGGGCTAAGGGT+AGG + chr8_1:54358914-54358933 None:intergenic 50.0%
AGGGGTCCAACTGCAAATAC+AGG + chr8_1:54359263-54359282 None:intergenic 50.0%
TGTATTTGCAGTTGGACCCC+TGG - chr8_1:54359262-54359281 Msa1201160:CDS 50.0%
GCCGAGTCAGAAACAAGTCA+AGG - chr8_1:54359293-54359312 Msa1201160:CDS 50.0%
TATGTTTCGTTTGGGAGCGG+TGG - chr8_1:54359368-54359387 Msa1201160:CDS 50.0%
! TATTGCTTGGCCGCTTTACG+CGG - chr8_1:54359727-54359746 Msa1201160:CDS 50.0%
! CGTGGTTGCTCTTCCCATTT+TGG + chr8_1:54359886-54359905 None:intergenic 50.0%
! TGCAGAGAAAGCTTTGTGCC+AGG - chr8_1:54359937-54359956 Msa1201160:CDS 50.0%
! GCAGAGAAAGCTTTGTGCCA+GGG - chr8_1:54359938-54359957 Msa1201160:CDS 50.0%
CAGTATAAGACGAACCACCC+TGG + chr8_1:54359958-54359977 None:intergenic 50.0%
GAAAGCAAGACCACGTGTGT+TGG + chr8_1:54358564-54358583 None:intergenic 50.0%
TTGCTTTCAAGCCCAGGCTT+GGG - chr8_1:54358576-54358595 Msa1201160:CDS 50.0%
GCTCGATGATAGGCATGAGA+TGG + chr8_1:54358602-54358621 None:intergenic 50.0%
GGGAGGAAGGAGGAAATGTT+TGG + chr8_1:54358762-54358781 None:intergenic 50.0%
TAGAAAGATGCGGGTGCAGA+CGG + chr8_1:54358796-54358815 None:intergenic 50.0%
ATGTCGACAATGAGAGCGGA+AGG + chr8_1:54358876-54358895 None:intergenic 50.0%
! GAGATCTAGGGCTAAGGGTA+GGG + chr8_1:54358913-54358932 None:intergenic 50.0%
! TGAGATCTAGGGCTAAGGGT+AGG + chr8_1:54358914-54358933 None:intergenic 50.0%
AGGGGTCCAACTGCAAATAC+AGG + chr8_1:54359263-54359282 None:intergenic 50.0%
TGTATTTGCAGTTGGACCCC+TGG - chr8_1:54359262-54359281 Msa1201160:CDS 50.0%
GCCGAGTCAGAAACAAGTCA+AGG - chr8_1:54359293-54359312 Msa1201160:CDS 50.0%
TATGTTTCGTTTGGGAGCGG+TGG - chr8_1:54359368-54359387 Msa1201160:CDS 50.0%
! TATTGCTTGGCCGCTTTACG+CGG - chr8_1:54359727-54359746 Msa1201160:CDS 50.0%
! CGTGGTTGCTCTTCCCATTT+TGG + chr8_1:54359886-54359905 None:intergenic 50.0%
! TGCAGAGAAAGCTTTGTGCC+AGG - chr8_1:54359937-54359956 Msa1201160:CDS 50.0%
! GCAGAGAAAGCTTTGTGCCA+GGG - chr8_1:54359938-54359957 Msa1201160:CDS 50.0%
CAGTATAAGACGAACCACCC+TGG + chr8_1:54359958-54359977 None:intergenic 50.0%
! GTGGTCTTGCTTTCAAGCCC+AGG - chr8_1:54358570-54358589 Msa1201160:CDS 55.0%
CTTGCTTTCAAGCCCAGGCT+TGG - chr8_1:54358575-54358594 Msa1201160:CDS 55.0%
!! ATGGATTGGTGGCTGCTTCG+AGG + chr8_1:54358710-54358729 None:intergenic 55.0%
AATGAGAGCGGAAGGTGGGA+GGG + chr8_1:54358868-54358887 None:intergenic 55.0%
CGACAATGAGAGCGGAAGGT+GGG + chr8_1:54358872-54358891 None:intergenic 55.0%
TCGACAATGAGAGCGGAAGG+TGG + chr8_1:54358873-54358892 None:intergenic 55.0%
AATGCTGGACCGGACCAACT+TGG - chr8_1:54359097-54359116 Msa1201160:CDS 55.0%
! TGACTCGGCTTGTCTCACCA+GGG + chr8_1:54359282-54359301 None:intergenic 55.0%
! GACGCTGCGTTTTTCACCAC+TGG - chr8_1:54359488-54359507 Msa1201160:CDS 55.0%
ACCACTGGAAGCAGTGGTGA+CGG - chr8_1:54359503-54359522 Msa1201160:CDS 55.0%
ATCCTCTGCTCCGCGTAAAG+CGG + chr8_1:54359740-54359759 None:intergenic 55.0%
TGGCATGGCGGTGAAGACTA+CGG - chr8_1:54359787-54359806 Msa1201160:CDS 55.0%
TGAAGACTACGGTGTCTCCG+AGG - chr8_1:54359798-54359817 Msa1201160:CDS 55.0%
GTCTCCGAGGAAGAATCAGC+TGG - chr8_1:54359811-54359830 Msa1201160:CDS 55.0%
TCCGAGGAAGAATCAGCTGG+TGG - chr8_1:54359814-54359833 Msa1201160:CDS 55.0%
! CCCACCAGCTGATTCTTCCT+CGG + chr8_1:54359818-54359837 None:intergenic 55.0%
CCGAGGAAGAATCAGCTGGT+GGG - chr8_1:54359815-54359834 Msa1201160:CDS 55.0%
CGAGGAAGAATCAGCTGGTG+GGG - chr8_1:54359816-54359835 Msa1201160:CDS 55.0%
GAAGAATCAGCTGGTGGGGA+GGG - chr8_1:54359820-54359839 Msa1201160:CDS 55.0%
ATGGGAAGAGCAACCACGTG+AGG - chr8_1:54359888-54359907 Msa1201160:CDS 55.0%
! GAGAAAGCTTTGTGCCAGGG+TGG - chr8_1:54359941-54359960 Msa1201160:CDS 55.0%
! GTGGTCTTGCTTTCAAGCCC+AGG - chr8_1:54358570-54358589 Msa1201160:CDS 55.0%
CTTGCTTTCAAGCCCAGGCT+TGG - chr8_1:54358575-54358594 Msa1201160:CDS 55.0%
!! ATGGATTGGTGGCTGCTTCG+AGG + chr8_1:54358710-54358729 None:intergenic 55.0%
AATGAGAGCGGAAGGTGGGA+GGG + chr8_1:54358868-54358887 None:intergenic 55.0%
CGACAATGAGAGCGGAAGGT+GGG + chr8_1:54358872-54358891 None:intergenic 55.0%
TCGACAATGAGAGCGGAAGG+TGG + chr8_1:54358873-54358892 None:intergenic 55.0%
AATGCTGGACCGGACCAACT+TGG - chr8_1:54359097-54359116 Msa1201160:CDS 55.0%
! TGACTCGGCTTGTCTCACCA+GGG + chr8_1:54359282-54359301 None:intergenic 55.0%
! GACGCTGCGTTTTTCACCAC+TGG - chr8_1:54359488-54359507 Msa1201160:CDS 55.0%
ACCACTGGAAGCAGTGGTGA+CGG - chr8_1:54359503-54359522 Msa1201160:CDS 55.0%
ATCCTCTGCTCCGCGTAAAG+CGG + chr8_1:54359740-54359759 None:intergenic 55.0%
TGGCATGGCGGTGAAGACTA+CGG - chr8_1:54359787-54359806 Msa1201160:CDS 55.0%
TGAAGACTACGGTGTCTCCG+AGG - chr8_1:54359798-54359817 Msa1201160:CDS 55.0%
GTCTCCGAGGAAGAATCAGC+TGG - chr8_1:54359811-54359830 Msa1201160:CDS 55.0%
TCCGAGGAAGAATCAGCTGG+TGG - chr8_1:54359814-54359833 Msa1201160:CDS 55.0%
! CCCACCAGCTGATTCTTCCT+CGG + chr8_1:54359818-54359837 None:intergenic 55.0%
CCGAGGAAGAATCAGCTGGT+GGG - chr8_1:54359815-54359834 Msa1201160:CDS 55.0%
CGAGGAAGAATCAGCTGGTG+GGG - chr8_1:54359816-54359835 Msa1201160:CDS 55.0%
GAAGAATCAGCTGGTGGGGA+GGG - chr8_1:54359820-54359839 Msa1201160:CDS 55.0%
ATGGGAAGAGCAACCACGTG+AGG - chr8_1:54359888-54359907 Msa1201160:CDS 55.0%
! GAGAAAGCTTTGTGCCAGGG+TGG - chr8_1:54359941-54359960 Msa1201160:CDS 55.0%
GCATGAGATGGCCCAAGCCT+GGG + chr8_1:54358590-54358609 None:intergenic 60.0%
AAAGATGCGGGTGCAGACGG+TGG + chr8_1:54358793-54358812 None:intergenic 60.0%
ATGAGAGCGGAAGGTGGGAG+GGG + chr8_1:54358867-54358886 None:intergenic 60.0%
CAATGAGAGCGGAAGGTGGG+AGG + chr8_1:54358869-54358888 None:intergenic 60.0%
! GACTCGGCTTGTCTCACCAG+GGG + chr8_1:54359281-54359300 None:intergenic 60.0%
!! CTGACTCGGCTTGTCTCACC+AGG + chr8_1:54359283-54359302 None:intergenic 60.0%
ACGTGCGTCCACAGAAGCTG+TGG - chr8_1:54359466-54359485 Msa1201160:CDS 60.0%
CCACTGGAAGCAGTGGTGAC+GGG - chr8_1:54359504-54359523 Msa1201160:CDS 60.0%
!! GGAAGCAGTGGTGACGGGTT+TGG - chr8_1:54359509-54359528 Msa1201160:CDS 60.0%
CGCGGAGCAGAGGATGAATG+CGG - chr8_1:54359745-54359764 Msa1201160:CDS 60.0%
GAGGATGAATGCGGCGTTGC+TGG - chr8_1:54359754-54359773 Msa1201160:CDS 60.0%
GATGAATGCGGCGTTGCTGG+TGG - chr8_1:54359757-54359776 Msa1201160:CDS 60.0%
GGAAGAATCAGCTGGTGGGG+AGG - chr8_1:54359819-54359838 Msa1201160:CDS 60.0%
GCATGAGATGGCCCAAGCCT+GGG + chr8_1:54358590-54358609 None:intergenic 60.0%
AAAGATGCGGGTGCAGACGG+TGG + chr8_1:54358793-54358812 None:intergenic 60.0%
ATGAGAGCGGAAGGTGGGAG+GGG + chr8_1:54358867-54358886 None:intergenic 60.0%
CAATGAGAGCGGAAGGTGGG+AGG + chr8_1:54358869-54358888 None:intergenic 60.0%
! GACTCGGCTTGTCTCACCAG+GGG + chr8_1:54359281-54359300 None:intergenic 60.0%
!! CTGACTCGGCTTGTCTCACC+AGG + chr8_1:54359283-54359302 None:intergenic 60.0%
ACGTGCGTCCACAGAAGCTG+TGG - chr8_1:54359466-54359485 Msa1201160:CDS 60.0%
CCACTGGAAGCAGTGGTGAC+GGG - chr8_1:54359504-54359523 Msa1201160:CDS 60.0%
!! GGAAGCAGTGGTGACGGGTT+TGG - chr8_1:54359509-54359528 Msa1201160:CDS 60.0%
CGCGGAGCAGAGGATGAATG+CGG - chr8_1:54359745-54359764 Msa1201160:CDS 60.0%
GAGGATGAATGCGGCGTTGC+TGG - chr8_1:54359754-54359773 Msa1201160:CDS 60.0%
GATGAATGCGGCGTTGCTGG+TGG - chr8_1:54359757-54359776 Msa1201160:CDS 60.0%
GGAAGAATCAGCTGGTGGGG+AGG - chr8_1:54359819-54359838 Msa1201160:CDS 60.0%
GGCATGAGATGGCCCAAGCC+TGG + chr8_1:54358591-54358610 None:intergenic 65.0%
CGCAGCGTCCACAGCTTCTG+TGG + chr8_1:54359477-54359496 None:intergenic 65.0%
CCCGTCACCACTGCTTCCAG+TGG + chr8_1:54359507-54359526 None:intergenic 65.0%
GAATGCGGCGTTGCTGGTGG+AGG - chr8_1:54359760-54359779 Msa1201160:CDS 65.0%
GCGTTGCTGGTGGAGGAGCT+TGG - chr8_1:54359767-54359786 Msa1201160:CDS 65.0%
GCTGGTGGAGGAGCTTGGCA+TGG - chr8_1:54359772-54359791 Msa1201160:CDS 65.0%
GGTGGAGGAGCTTGGCATGG+CGG - chr8_1:54359775-54359794 Msa1201160:CDS 65.0%
GGCATGAGATGGCCCAAGCC+TGG + chr8_1:54358591-54358610 None:intergenic 65.0%
CGCAGCGTCCACAGCTTCTG+TGG + chr8_1:54359477-54359496 None:intergenic 65.0%
CCCGTCACCACTGCTTCCAG+TGG + chr8_1:54359507-54359526 None:intergenic 65.0%
GAATGCGGCGTTGCTGGTGG+AGG - chr8_1:54359760-54359779 Msa1201160:CDS 65.0%
GCGTTGCTGGTGGAGGAGCT+TGG - chr8_1:54359767-54359786 Msa1201160:CDS 65.0%
GCTGGTGGAGGAGCTTGGCA+TGG - chr8_1:54359772-54359791 Msa1201160:CDS 65.0%
GGTGGAGGAGCTTGGCATGG+CGG - chr8_1:54359775-54359794 Msa1201160:CDS 65.0%
!! TGCAGACGGTGGCGGAGACG+GGG + chr8_1:54358782-54358801 None:intergenic 70.0%
!! GTGCAGACGGTGGCGGAGAC+GGG + chr8_1:54358783-54358802 None:intergenic 70.0%
!! GGTGCAGACGGTGGCGGAGA+CGG + chr8_1:54358784-54358803 None:intergenic 70.0%
GATGCGGGTGCAGACGGTGG+CGG + chr8_1:54358790-54358809 None:intergenic 70.0%
! GGCCGCTTTACGCGGAGCAG+AGG - chr8_1:54359735-54359754 Msa1201160:CDS 70.0%
!! TGCAGACGGTGGCGGAGACG+GGG + chr8_1:54358782-54358801 None:intergenic 70.0%
!! GTGCAGACGGTGGCGGAGAC+GGG + chr8_1:54358783-54358802 None:intergenic 70.0%
!! GGTGCAGACGGTGGCGGAGA+CGG + chr8_1:54358784-54358803 None:intergenic 70.0%
GATGCGGGTGCAGACGGTGG+CGG + chr8_1:54358790-54358809 None:intergenic 70.0%
! GGCCGCTTTACGCGGAGCAG+AGG - chr8_1:54359735-54359754 Msa1201160:CDS 70.0%
GGCGGAGACGGGGAGGAAGG+AGG + chr8_1:54358772-54358791 None:intergenic 75.0%
!! GGTGGCGGAGACGGGGAGGA+AGG + chr8_1:54358775-54358794 None:intergenic 75.0%
!! AGACGGTGGCGGAGACGGGG+AGG + chr8_1:54358779-54358798 None:intergenic 75.0%
GGCGGAGACGGGGAGGAAGG+AGG + chr8_1:54358772-54358791 None:intergenic 75.0%
!! GGTGGCGGAGACGGGGAGGA+AGG + chr8_1:54358775-54358794 None:intergenic 75.0%
!! AGACGGTGGCGGAGACGGGG+AGG + chr8_1:54358779-54358798 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 54358546 54360078 54358546 ID=Msa1201160;Name=Msa1201160
chr8_1 mRNA 54358546 54360078 54358546 ID=Msa1201160-mRNA-1;Parent=Msa1201160;Name=Msa1201160-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|510
chr8_1 exon 54358546 54360078 54358546 ID=Msa1201160-mRNA-1:exon:17442;Parent=Msa1201160-mRNA-1
chr8_1 CDS 54358546 54360078 54358546 ID=Msa1201160-mRNA-1:cds;Parent=Msa1201160-mRNA-1
Gene Sequence

>Msa1201160

ATGGATTTGTACAAGCCAACACACGTGGTCTTGCTTTCAAGCCCAGGCTTGGGCCATCTCATGCCTATCATCGAGCTAGCTAAACGCTTCCAAATCCACCACAATTTCAGACTCACAATTCTTGCCATCACTTCCCAAACTTCACACACTGAATCTCAAATCCTCGAAGCAGCCACCAATCCATCACTCTACAACATCATCCAAATCCCATCACCAAACATTTCCTCCTTCCTCCCCGTCTCCGCCACCGTCTGCACCCGCATCTTTCTAACAATGCGTCACTCCATACCTTCCATCAAATCTGCACTCACAAACTTACCCCTCCCACCTTCCGCTCTCATTGTCGACATATTCGGAACAGAAGCCCTACCCTTAGCCCTAGATCTCAACATTCCGAAATTCATTTACGTAGCTTCACATGCTTGGTTTCTTTCCCTGTACGTGTACTCTCCTGTTTTGGATAAACAAATCCAAGGACCATACATTGATCAGAAAGAACCTATTAAAATCCCGGGTTGTAAATCAGTTCAACCAAATGACTTGGTTGATCTAATGCTGGACCGGACCAACTTGGAGTATAAAGAGTACTTAGCCGCAGCGAAAAACTTCTCGAAAAGCGACGCCATCTTAGTTAACACATGGGATGAACTTCAACATAGAGACCTTAAAGCACTTAATGATGAAGATGGGGAATTATCAAGTTTATTGAAAGTTCCTGTATTTGCAGTTGGACCCCTGGTGAGACAAGCCGAGTCAGAAACAAGTCAAGGTACCGAGTCTGTAATTCAATGGCTTGATAAACAACCAAAGGAATCAGTGGTTTATGTTTCGTTTGGGAGCGGTGGAACTTTGTCGTATGAGCAAATGAAGGAAATAGCTTTTGGTTTAGAATTAAGTGAACAAAGATTTGTTTGGGTAGTACGTGCGTCCACAGAAGCTGTGGACGCTGCGTTTTTCACCACTGGAAGCAGTGGTGACGGGTTTGGTGATGAACTTGATGATCAGATAGGTAAACACTTACCTGAGGGGTTTGTAGAGAGAATCAAGAATAAGAATGTGGGTTTGTTAGTTCATGAATGGGCACCACAAGTAACTGTTTTGAAACATCCTTCCATAGGTGGTTTTGTTTCACACTGTGGATGGGGTTCTGTGCTTGAGAGTTTAACCAACGGTGTGCCTATTATTGCTTGGCCGCTTTACGCGGAGCAGAGGATGAATGCGGCGTTGCTGGTGGAGGAGCTTGGCATGGCGGTGAAGACTACGGTGTCTCCGAGGAAGAATCAGCTGGTGGGGAGGGAAGAGATAGCAAGTTTGGTGAGAAAGGTTATTTTGGTGGACCAAAATGGGAAGAGCAACCACGTGAGGTACAGAGTTAAAGAGGTTAAGGTTAGTGCAGAGAAAGCTTTGTGCCAGGGTGGTTCGTCTTATACTGCATTGTCTCATGTTGTAAAAATCATAAACAAACAAGATTTTGTTTGTGTTTCAGAAAACGTGGATGCTGTTAGGGATGATATAAAAGACAGAGAAGATTAG

Protein sequence

>Msa1201160

MDLYKPTHVVLLSSPGLGHLMPIIELAKRFQIHHNFRLTILAITSQTSHTESQILEAATNPSLYNIIQIPSPNISSFLPVSATVCTRIFLTMRHSIPSIKSALTNLPLPPSALIVDIFGTEALPLALDLNIPKFIYVASHAWFLSLYVYSPVLDKQIQGPYIDQKEPIKIPGCKSVQPNDLVDLMLDRTNLEYKEYLAAAKNFSKSDAILVNTWDELQHRDLKALNDEDGELSSLLKVPVFAVGPLVRQAESETSQGTESVIQWLDKQPKESVVYVSFGSGGTLSYEQMKEIAFGLELSEQRFVWVVRASTEAVDAAFFTTGSSGDGFGDELDDQIGKHLPEGFVERIKNKNVGLLVHEWAPQVTVLKHPSIGGFVSHCGWGSVLESLTNGVPIIAWPLYAEQRMNAALLVEELGMAVKTTVSPRKNQLVGREEIASLVRKVILVDQNGKSNHVRYRVKEVKVSAEKALCQGGSSYTALSHVVKIINKQDFVCVSENVDAVRDDIKDRED*