AlfalfaGEDB | Msa0156250

M. sativa cultivar zhongmu-4 / Msa0156250

KEGG: -
GO: -
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0156250	XP_013467094.1	97.664	214	5	0	1	214	1	214	3.82e-152	431

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0156250	sp\|O82268\|LSH3_ARATH	84.277	159	25	0	38	196	27	185	6.64e-87	258

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0156250	A0A072VGF5	97.664	214	5	0	1	214	1	214	1.83e-152	431

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa0156250	0.818763	1.654525e-52	-8.615850e-47
Msa0015710	Msa0156250	0.896176	4.739962e-76	-8.615850e-47
Msa0016120	Msa0156250	0.852401	4.728654e-61	-8.615850e-47
Msa0019600	Msa0156250	0.835531	1.589558e-56	-8.615850e-47
Msa0050040	Msa0156250	0.818138	2.291953e-52	-8.615850e-47
Msa0055450	Msa0156250	0.821175	4.643595e-53	-8.615850e-47
Msa0080990	Msa0156250	0.832979	6.940315e-56	-8.615850e-47
Msa0084000	Msa0156250	0.802071	6.676640e-49	-8.615850e-47
Msa0102990	Msa0156250	0.817234	3.664564e-52	-8.615850e-47
Msa0109880	Msa0156250	0.881462	2.352787e-70	-8.615850e-47
Msa0110970	Msa0156250	0.803397	3.554115e-49	-8.615850e-47
Msa0124130	Msa0156250	0.842623	2.309502e-58	-8.615850e-47
Msa0141120	Msa0156250	0.800225	1.592408e-48	-8.615850e-47
Msa0149140	Msa0156250	0.845144	4.878865e-59	-8.615850e-47
Msa0152500	Msa0156250	0.802327	5.914429e-49	-8.615850e-47
Msa0156250	Msa0185490	0.838210	3.293079e-57	-8.615850e-47
Msa0156250	Msa0194380	0.805077	1.588376e-49	-8.615850e-47
Msa0156250	Msa0197100	0.839991	1.137703e-57	-8.615850e-47
Msa0156250	Msa0203030	0.805055	1.605333e-49	-8.615850e-47
Msa0156250	Msa0212150	0.877838	4.556173e-69	-8.615850e-47
Msa0156250	Msa0219190	0.817672	2.920315e-52	-8.615850e-47
Msa0156250	Msa0221290	0.829040	6.430169e-55	-8.615850e-47
Msa0156250	Msa0239030	0.852902	3.402982e-61	-8.615850e-47
Msa0156250	Msa0252630	0.815375	9.545474e-52	-8.615850e-47
Msa0156250	Msa0252770	0.869236	3.602241e-66	-8.615850e-47
Msa0156250	Msa0266930	0.800422	1.451984e-48	-8.615850e-47
Msa0156250	Msa0276080	0.804433	2.165248e-49	-8.615850e-47
Msa0156250	Msa0276740	0.836725	7.906176e-57	-8.615850e-47
Msa0156250	Msa0289920	0.876275	1.589895e-68	-8.615850e-47
Msa0156250	Msa0298240	0.839732	1.328448e-57	-8.615850e-47
Msa0156250	Msa0306120	0.877419	6.380877e-69	-8.615850e-47
Msa0156250	Msa0316680	0.844942	5.529301e-59	-8.615850e-47
Msa0156250	Msa0322840	0.810845	9.410523e-51	-8.615850e-47
Msa0156250	Msa0329620	0.884268	2.216521e-71	-8.615850e-47
Msa0156250	Msa0333700	0.812207	4.761811e-51	-8.615850e-47
Msa0156250	Msa0343660	0.815002	1.155308e-51	-8.615850e-47
Msa0156250	Msa0351770	0.810420	1.163152e-50	-8.615850e-47
Msa0156250	Msa0359250	0.891206	4.908396e-74	-8.615850e-47
Msa0156250	Msa0373960	0.819235	1.292023e-52	-8.615850e-47
Msa0156250	Msa0392420	0.827345	1.647101e-54	-8.615850e-47
Msa0156250	Msa0392460	0.823849	1.110138e-53	-8.615850e-47
Msa0156250	Msa0392490	0.812256	4.645383e-51	-8.615850e-47
Msa0156250	Msa0406000	0.893048	9.031586e-75	-8.615850e-47
Msa0156250	Msa0423100	0.803317	3.692349e-49	-8.615850e-47
Msa0156250	Msa0424330	0.831043	2.087625e-55	-8.615850e-47
Msa0156250	Msa0424340	0.839937	1.175128e-57	-8.615850e-47
Msa0156250	Msa0424350	0.842444	2.576941e-58	-8.615850e-47
Msa0156250	Msa0451400	0.901390	2.812638e-78	-8.615850e-47
Msa0156250	Msa0469260	0.808781	2.616539e-50	-8.615850e-47
Msa0156250	Msa0487570	0.831855	1.317192e-55	-8.615850e-47
Msa0156250	Msa0487630	0.821396	4.129717e-53	-8.615850e-47
Msa0156250	Msa0492190	0.874761	5.244160e-68	-8.615850e-47
Msa0156250	Msa0515950	0.827403	1.595318e-54	-8.615850e-47
Msa0156250	Msa0534930	0.823817	1.129463e-53	-8.615850e-47
Msa0156250	Msa0535040	0.835594	1.532496e-56	-8.615850e-47
Msa0156250	Msa0537920	0.813144	2.970182e-51	-8.615850e-47
Msa0156250	Msa0538220	0.802340	5.878198e-49	-8.615850e-47
Msa0156250	Msa0575740	0.815631	8.374909e-52	-8.615850e-47
Msa0156250	Msa0591790	0.854646	1.071637e-61	-8.615850e-47
Msa0156250	Msa0594090	0.877447	6.239178e-69	-8.615850e-47
Msa0156250	Msa0641250	0.819980	8.732283e-53	-8.615850e-47
Msa0156250	Msa0669840	0.866786	2.210378e-65	-8.615850e-47
Msa0156250	Msa0709450	0.810353	1.202419e-50	-8.615850e-47
Msa0156250	Msa0711320	0.820618	6.235011e-53	-8.615850e-47
Msa0156250	Msa0727930	0.829190	5.911545e-55	-8.615850e-47
Msa0156250	Msa0737190	0.814952	1.185462e-51	-8.615850e-47
Msa0156250	Msa0739580	0.879837	8.994747e-70	-8.615850e-47
Msa0156250	Msa0742180	0.806143	9.490528e-50	-8.615850e-47
Msa0156250	Msa0748000	0.832105	1.142888e-55	-8.615850e-47
Msa0156250	Msa0764820	0.802185	6.325080e-49	-8.615850e-47
Msa0156250	Msa0770290	0.800455	1.430043e-48	-8.615850e-47
Msa0156250	Msa0778930	0.812367	4.392611e-51	-8.615850e-47
Msa0156250	Msa0782360	0.856334	3.450474e-62	-8.615850e-47
Msa0156250	Msa0819890	0.811094	8.311767e-51	-8.615850e-47
Msa0156250	Msa0823400	0.820847	5.523217e-53	-8.615850e-47
Msa0156250	Msa0828830	0.890586	8.619558e-74	-8.615850e-47
Msa0156250	Msa0831940	0.803403	3.543961e-49	-8.615850e-47
Msa0156250	Msa0849280	0.831127	1.991079e-55	-8.615850e-47
Msa0156250	Msa0851020	0.826050	3.354907e-54	-8.615850e-47
Msa0156250	Msa0856520	0.800314	1.527791e-48	-8.615850e-47
Msa0156250	Msa0860280	0.877267	7.206200e-69	-8.615850e-47
Msa0156250	Msa0867350	0.838599	2.613870e-57	-8.615850e-47
Msa0156250	Msa0896350	0.813216	2.863170e-51	-8.615850e-47
Msa0156250	Msa0898730	0.846433	2.179222e-59	-8.615850e-47
Msa0156250	Msa0905970	0.807888	4.057009e-50	-8.615850e-47
Msa0156250	Msa0922750	0.821959	3.059411e-53	-8.615850e-47
Msa0156250	Msa0929870	0.851723	7.368272e-61	-8.615850e-47
Msa0156250	Msa0936410	0.813657	2.290523e-51	-8.615850e-47
Msa0156250	Msa0944760	0.839661	1.386240e-57	-8.615850e-47
Msa0156250	Msa0944880	0.805996	1.019218e-49	-8.615850e-47
Msa0156250	Msa0961560	0.824962	6.072462e-54	-8.615850e-47
Msa0156250	Msa0965310	0.809078	2.260618e-50	-8.615850e-47
Msa0156250	Msa0973250	0.806296	8.811756e-50	-8.615850e-47
Msa0156250	Msa0979510	0.813351	2.675050e-51	-8.615850e-47
Msa0156250	Msa0996270	0.828827	7.240409e-55	-8.615850e-47
Msa0156250	Msa0999300	0.880560	4.963819e-70	-8.615850e-47
Msa0156250	Msa0999350	0.813518	2.458472e-51	-8.615850e-47
Msa0156250	Msa0999360	0.808885	2.486199e-50	-8.615850e-47
Msa0156250	Msa0999400	0.801201	1.007065e-48	-8.615850e-47
Msa0156250	Msa0999410	0.811627	6.369190e-51	-8.615850e-47
Msa0156250	Msa1001890	0.857869	1.216292e-62	-8.615850e-47
Msa0156250	Msa1016600	0.821757	3.407685e-53	-8.615850e-47
Msa0156250	Msa1037770	0.819791	9.649698e-53	-8.615850e-47
Msa0156250	Msa1037890	0.811612	6.416489e-51	-8.615850e-47
Msa0156250	Msa1037900	0.855166	7.568256e-62	-8.615850e-47
Msa0156250	Msa1037910	0.845059	5.142300e-59	-8.615850e-47
Msa0156250	Msa1041530	0.822372	2.454367e-53	-8.615850e-47
Msa0156250	Msa1060580	0.805099	1.572108e-49	-8.615850e-47
Msa0156250	Msa1081570	0.839356	1.664315e-57	-8.615850e-47
Msa0156250	Msa1084520	0.805780	1.131282e-49	-8.615850e-47
Msa0156250	Msa1096210	0.827073	1.913450e-54	-8.615850e-47
Msa0156250	Msa1127140	0.839470	1.554187e-57	-8.615850e-47
Msa0156250	Msa1129960	0.840310	9.390215e-58	-8.615850e-47
Msa0156250	Msa1129970	0.839217	1.807878e-57	-8.615850e-47
Msa0156250	Msa1130010	0.813763	2.171354e-51	-8.615850e-47
Msa0156250	Msa1145020	0.824956	6.094521e-54	-8.615850e-47
Msa0156250	Msa1166400	0.838243	3.227832e-57	-8.615850e-47
Msa0156250	Msa1176160	0.839999	1.132346e-57	-8.615850e-47
Msa0156250	Msa1201110	0.837723	4.391968e-57	-8.615850e-47
Msa0156250	Msa1201160	0.875130	3.925843e-68	-8.615850e-47
Msa0156250	Msa1228190	0.891685	3.169859e-74	-8.615850e-47
Msa0156250	Msa1233560	0.823970	1.039412e-53	-8.615850e-47
Msa0156250	Msa1271260	0.861972	7.044570e-64	-8.615850e-47
Msa0156250	Msa1277400	0.815553	8.714327e-52	-8.615850e-47
Msa0156250	Msa1294290	0.858631	7.217721e-63	-8.615850e-47
Msa0156250	Msa1305310	0.806689	7.281911e-50	-8.615850e-47
Msa0156250	Msa1305510	0.841408	4.838000e-58	-8.615850e-47
Msa0156250	Msa1307150	0.831718	1.424469e-55	-8.615850e-47
Msa0156250	Msa1307190	0.842569	2.386689e-58	-8.615850e-47
Msa0156250	Msa1313970	0.801086	1.062728e-48	-8.615850e-47
Msa0156250	Msa1336780	0.804025	2.633369e-49	-8.615850e-47
Msa0156250	Msa1339580	0.806906	6.553194e-50	-8.615850e-47
Msa0156250	Msa1356990	0.822773	1.979550e-53	-8.615850e-47
Msa0156250	Msa1374550	0.804069	2.577848e-49	-8.615850e-47
Msa0156250	Msa1379970	0.860336	2.217688e-63	-8.615850e-47
Msa0156250	Msa1394890	0.832307	1.018618e-55	-8.615850e-47
Msa0156250	Msa1406780	0.882347	1.124634e-70	-8.615850e-47
Msa0156250	Msa1420060	0.833242	5.968539e-56	-8.615850e-47
Msa0156250	Msa1421550	0.894867	1.646326e-75	-8.615850e-47
Msa0156250	Msa1423460	0.840973	6.295621e-58	-8.615850e-47
Msa0156250	Msa1431850	0.888412	6.039649e-73	-8.615850e-47
Msa0156250	Msa1435480	0.828416	9.101545e-55	-8.615850e-47
Msa0156250	Msa1449940	0.810827	9.499206e-51	-8.615850e-47
Msa0156250	Msa1455320	0.801223	9.965831e-49	-8.615850e-47
Msa0156250	Msa1459530	0.820239	7.618291e-53	-8.615850e-47
Msa0156250	Msa1461060	0.821635	3.635923e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0156250	MtrunA17_Chr1g0167411	97.664	214	5	0	1	214	1	214	3.52e-156	431
Msa0156250	MtrunA17_Chr1g0187671	79.787	188	32	2	19	206	13	194	2.61e-91	266
Msa0156250	MtrunA17_Chr5g0431211	80.282	142	28	0	55	196	27	168	6.17e-88	258
Msa0156250	MtrunA17_Chr4g0051251	83.704	135	22	0	64	198	45	179	6.22e-87	256
Msa0156250	MtrunA17_Chr7g0261381	75.385	195	47	1	1	195	1	194	8.64e-87	255
Msa0156250	MtrunA17_Chr1g0183761	96.183	131	5	0	65	195	45	175	4.55e-84	248
Msa0156250	MtrunA17_Chr3g0105921	70.760	171	39	2	37	196	3	173	2.36e-76	229
Msa0156250	MtrunA17_Chr2g0325831	71.724	145	41	0	44	188	2	146	3.13e-75	224
Msa0156250	MtrunA17_Chr4g0041141	74.436	133	34	0	56	188	20	152	9.15e-75	223
Msa0156250	MtrunA17_Chr2g0315791	65.644	163	55	1	34	195	1	163	9.50e-74	221
Msa0156250	MtrunA17_Chr2g0283861	72.662	139	38	0	57	195	27	165	6.45e-72	216
Msa0156250	MtrunA17_Chr7g0274631	63.924	158	55	2	40	196	2	158	3.62e-71	214
Msa0156250	MtrunA17_Chr1g0190231	78.378	148	32	0	42	189	17	164	4.27e-71	214
Msa0156250	MtrunA17_Chr8g0379061	72.800	125	34	0	64	188	84	208	8.48e-57	180
Msa0156250	MtrunA17_Chr1g0211641	84.783	46	7	0	58	103	64	109	7.66e-24	91.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0156250	AT2G31160.1	84.277	159	25	0	38	196	27	185	6.75e-88	258
Msa0156250	AT1G07090.1	77.551	147	28	1	51	197	22	163	1.03e-86	254
Msa0156250	AT3G23290.2	95.238	126	6	0	64	189	47	172	5.94e-82	243
Msa0156250	AT5G58500.1	80.741	135	25	1	63	196	17	151	9.95e-82	241
Msa0156250	AT5G28490.1	80.405	148	23	1	47	194	13	154	2.02e-75	226
Msa0156250	AT2G42610.1	77.344	128	29	0	61	188	21	148	8.50e-73	219
Msa0156250	AT2G42610.2	77.344	128	29	0	61	188	21	148	8.50e-73	219
Msa0156250	AT3G04510.1	75.168	149	37	0	46	194	14	162	7.14e-72	217
Msa0156250	AT1G78815.1	62.585	147	55	0	64	210	39	185	1.06e-66	204
Msa0156250	AT4G18610.1	64.138	145	51	1	45	188	17	161	5.59e-64	197
Msa0156250	AT1G16910.1	57.419	155	61	1	39	193	2	151	6.55e-62	191

Find 62 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACACAAATTTATTACAAAA+TGG	0.255478	1_4:-22091495	None:intergenic
CAAAATGGACCGTGAATAAT+TGG	0.289752	1_4:-22091480	None:intergenic
GGATTTGGATGTCCATAAAA+TGG	0.296810	1_4:-22089943	None:intergenic
TTGCGTTACCTCGACCAATT+TGG	0.302218	1_4:+22089892	Msa0156250:CDS
GTTGTTGTTGATGTTGTTGA+TGG	0.314316	1_4:-22089751	None:intergenic
GGACATGGTGCAGGTGGATT+TGG	0.320133	1_4:-22089958	None:intergenic
GACTTTACCTTCGCGAAGTT+AGG	0.323181	1_4:+22090097	Msa0156250:CDS
TGAAAATAAATGATAGGGTT+TGG	0.339101	1_4:-22089495	None:intergenic
GGGTTTGTTATGTTGATCAT+AGG	0.347871	1_4:-22089649	None:intergenic
AAGCCAGAAGCTAATCCTTT+TGG	0.361490	1_4:+22090060	Msa0156250:CDS
AGAAGAGATTGGAACACATT+TGG	0.367128	1_4:+22089799	Msa0156250:CDS
GTGGTGGTCTATGGTTTCTT+AGG	0.368488	1_4:-22089828	None:intergenic
GGTGGTGGTGGTGGCGGCTG+AGG	0.370057	1_4:-22090177	None:intergenic
AAATTCTTGAAGAGAATTCA+TGG	0.377394	1_4:-22089587	None:intergenic
TATTTGTGAAAATAAATGAT+AGG	0.382504	1_4:-22089501	None:intergenic
ACTTTACCTTCGCGAAGTTA+GGG	0.398859	1_4:+22090098	Msa0156250:CDS
ATGGAAACTGCAGTGGAAGC+TGG	0.414108	1_4:+22091370	Msa0156250:three_prime_UTR
GCACCAAAAGGATTAGCTTC+TGG	0.418214	1_4:-22090063	None:intergenic
GTTGTAGTTGCATTATTTGA+TGG	0.419514	1_4:-22090198	None:intergenic
GGTTTGTTATGTTGATCATA+GGG	0.430093	1_4:-22089648	None:intergenic
TAGTAGCAGCAGTAACTAAA+GGG	0.431809	1_4:+22091442	Msa0156250:three_prime_UTR
GGTAGTCTTGATGCACTCAT+TGG	0.434097	1_4:+22090003	Msa0156250:CDS
ATTTGTGAAAATAAATGATA+GGG	0.456114	1_4:-22089500	None:intergenic
AGAATCAAAAGAGAAGAGAT+TGG	0.459394	1_4:+22089788	Msa0156250:CDS
CTTGTCCTCTTCGCCAAGCG+TGG	0.459831	1_4:+22089980	Msa0156250:CDS
GGTGGTGGTGGCGGCTGAGG+CGG	0.465046	1_4:-22090174	None:intergenic
GTAGTAGCAGCAGTAACTAA+AGG	0.470487	1_4:+22091441	Msa0156250:three_prime_UTR
GCATTATTTGATGGTGGTGG+TGG	0.471088	1_4:-22090189	None:intergenic
TTATTTGATGGTGGTGGTGG+TGG	0.487231	1_4:-22090186	None:intergenic
TTGTCCTCTTCGCCAAGCGT+GGG	0.488923	1_4:+22089981	Msa0156250:CDS
AGAGTGAAAGTGGTGGTCTA+TGG	0.493036	1_4:-22089837	None:intergenic
ATAAATTTGTGTGTACTTGA+AGG	0.495736	1_4:+22091505	Msa0156250:three_prime_UTR
GTCATCGTCATCGATGATGA+TGG	0.500415	1_4:-22089670	None:intergenic
GTAGTCTTGATGCACTCATT+GGG	0.507513	1_4:+22090004	Msa0156250:CDS
TTTGTGTGACCAATTATTCA+CGG	0.508487	1_4:+22091471	Msa0156250:three_prime_UTR
TGATGTTGTTGTTGTGGACG+AGG	0.511739	1_4:-22089725	None:intergenic
GTTGCATTATTTGATGGTGG+TGG	0.513644	1_4:-22090192	None:intergenic
CGAACAGCACGAGCACCAAA+AGG	0.514487	1_4:-22090075	None:intergenic
TGGAAACTGCAGTGGAAGCT+GGG	0.516292	1_4:+22091371	Msa0156250:three_prime_UTR
TGGAGGTGATGTTGTTGTTG+TGG	0.519070	1_4:-22089731	None:intergenic
CACGCTTGGCGAAGAGGACA+AGG	0.527749	1_4:-22089979	None:intergenic
GTTGTTGATGTTGTTGATGG+AGG	0.529776	1_4:-22089748	None:intergenic
CTTTCACTCTCACGTTGTAG+TGG	0.531680	1_4:+22089850	Msa0156250:CDS
CATCAAGACTACCCCACGCT+TGG	0.543485	1_4:-22089993	None:intergenic
GTAGTTGCATTATTTGATGG+TGG	0.544780	1_4:-22090195	None:intergenic
AGAGGACAAGGACATGGTGC+AGG	0.565916	1_4:-22089967	None:intergenic
CTACCCCACGCTTGGCGAAG+AGG	0.567363	1_4:-22089985	None:intergenic
TGCAGTGTGAGATATGCAAA+TGG	0.573258	1_4:+22091351	Msa0156250:three_prime_UTR
CTACAACGTGAGAGTGAAAG+TGG	0.580478	1_4:-22089847	None:intergenic
CGAGGTAACGCAAGAACTCA+AGG	0.585305	1_4:-22089882	None:intergenic
GGACAAGGACATGGTGCAGG+TGG	0.588264	1_4:-22089964	None:intergenic
TCATCGTCATCGATGATGAT+GGG	0.604263	1_4:-22089669	None:intergenic
TGTCCTCTTCGCCAAGCGTG+GGG	0.612011	1_4:+22089982	Msa0156250:CDS
TGTTGTAGATGACGATGGTA+TGG	0.613461	1_4:-22089692	None:intergenic
TGGCGAAGAGGACAAGGACA+TGG	0.629659	1_4:-22089973	None:intergenic
GAAGTCTTGAGATCAGTACA+TGG	0.630606	1_4:+22091322	Msa0156250:intron
GATTCTCAAGCTAAAGCTAG+AGG	0.638819	1_4:+22090120	Msa0156250:CDS
TATGCAAATGGAAACTGCAG+TGG	0.638923	1_4:+22091363	Msa0156250:three_prime_UTR
GAGAATCCCTAACTTCGCGA+AGG	0.649287	1_4:-22090104	None:intergenic
AAGTCTTGAGATCAGTACAT+GGG	0.676097	1_4:+22091323	Msa0156250:three_prime_UTR
GCTGATGTTGTAGATGACGA+TGG	0.727039	1_4:-22089697	None:intergenic
CAACGTGAGAGTGAAAGTGG+TGG	0.746060	1_4:-22089844	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TCAAATTTTGTATTAAAATT+TGG	-	chr1_4:22090842-22090861	None:intergenic	10.0%
!!!	TCAAATTTTGTATTAAAATT+TGG	-	chr1_4:22090842-22090861	None:intergenic	10.0%
!!	AAAAATTAGGAAAAAAAAGA+AGG	-	chr1_4:22089444-22089463	None:intergenic	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	-	chr1_4:22089503-22089522	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	-	chr1_4:22089504-22089523	None:intergenic	15.0%
!!	ATAAAAAAGAGCTTATTAAA+GGG	-	chr1_4:22090682-22090701	None:intergenic	15.0%
!!	TATAAAAAAGAGCTTATTAA+AGG	-	chr1_4:22090683-22090702	None:intergenic	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	-	chr1_4:22091259-22091278	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	-	chr1_4:22091260-22091279	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	-	chr1_4:22091294-22091313	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	+	chr1_4:22091568-22091587	Msa0156250:three_prime_UTR	15.0%
!!	AAAAATTAGGAAAAAAAAGA+AGG	-	chr1_4:22089444-22089463	None:intergenic	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	-	chr1_4:22089503-22089522	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	-	chr1_4:22089504-22089523	None:intergenic	15.0%
!!	ATAAAAAAGAGCTTATTAAA+GGG	-	chr1_4:22090682-22090701	None:intergenic	15.0%
!!	TATAAAAAAGAGCTTATTAA+AGG	-	chr1_4:22090683-22090702	None:intergenic	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	-	chr1_4:22091259-22091278	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	-	chr1_4:22091260-22091279	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	-	chr1_4:22091294-22091313	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	+	chr1_4:22091568-22091587	Msa0156250:three_prime_UTR	15.0%
!!	AGTAGAAACAAGAAAAAATT+AGG	-	chr1_4:22089457-22089476	None:intergenic	20.0%
!!!	TTTTTTTTTAAACCATGTGT+TGG	+	chr1_4:22090310-22090329	Msa0156250:intron	20.0%
!!	AAATCTCTGTATATTATAGT+AGG	+	chr1_4:22090373-22090392	Msa0156250:intron	20.0%
!!	TTCATTGACCATTATATATT+TGG	-	chr1_4:22090415-22090434	None:intergenic	20.0%
!!	GTTCTATAAACTAAATTATC+CGG	+	chr1_4:22090864-22090883	Msa0156250:intron	20.0%
!!	TGTATATAGATAATTCATCA+AGG	+	chr1_4:22091179-22091198	Msa0156250:intron	20.0%
!!	CACACAAATTTATTACAAAA+TGG	-	chr1_4:22091498-22091517	None:intergenic	20.0%
!!	AGTAGAAACAAGAAAAAATT+AGG	-	chr1_4:22089457-22089476	None:intergenic	20.0%
!!!	TTTTTTTTTAAACCATGTGT+TGG	+	chr1_4:22090310-22090329	Msa0156250:intron	20.0%
!!	AAATCTCTGTATATTATAGT+AGG	+	chr1_4:22090373-22090392	Msa0156250:intron	20.0%
!!	TTCATTGACCATTATATATT+TGG	-	chr1_4:22090415-22090434	None:intergenic	20.0%
!!	GTTCTATAAACTAAATTATC+CGG	+	chr1_4:22090864-22090883	Msa0156250:intron	20.0%
!!	TGTATATAGATAATTCATCA+AGG	+	chr1_4:22091179-22091198	Msa0156250:intron	20.0%
!!	CACACAAATTTATTACAAAA+TGG	-	chr1_4:22091498-22091517	None:intergenic	20.0%
!	TGAAAATAAATGATAGGGTT+TGG	-	chr1_4:22089498-22089517	None:intergenic	25.0%
!	AAATTCTTGAAGAGAATTCA+TGG	-	chr1_4:22089590-22089609	None:intergenic	25.0%
!	ATAGGGATCCAAATATATAA+TGG	+	chr1_4:22090404-22090423	Msa0156250:intron	25.0%
!!	AAGAGATACTCTAAAAACTT+TGG	-	chr1_4:22090654-22090673	None:intergenic	25.0%
!	AATGACTCTGAATATTCTAA+CGG	-	chr1_4:22090801-22090820	None:intergenic	25.0%
!!	TGACTACAATTTCTTTTTGA+AGG	-	chr1_4:22091064-22091083	None:intergenic	25.0%
!	CTATATACAAAAAATTGCAC+AGG	-	chr1_4:22091168-22091187	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	+	chr1_4:22091505-22091524	Msa0156250:three_prime_UTR	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	-	chr1_4:22089498-22089517	None:intergenic	25.0%
!	AAATTCTTGAAGAGAATTCA+TGG	-	chr1_4:22089590-22089609	None:intergenic	25.0%
!	ATAGGGATCCAAATATATAA+TGG	+	chr1_4:22090404-22090423	Msa0156250:intron	25.0%
!!	AAGAGATACTCTAAAAACTT+TGG	-	chr1_4:22090654-22090673	None:intergenic	25.0%
!	AATGACTCTGAATATTCTAA+CGG	-	chr1_4:22090801-22090820	None:intergenic	25.0%
!!	TGACTACAATTTCTTTTTGA+AGG	-	chr1_4:22091064-22091083	None:intergenic	25.0%
!	CTATATACAAAAAATTGCAC+AGG	-	chr1_4:22091168-22091187	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	+	chr1_4:22091505-22091524	Msa0156250:three_prime_UTR	25.0%
!!	TTTTCTGATCTAGCTTGATT+TGG	-	chr1_4:22089538-22089557	None:intergenic	30.0%
!!!	GTTCATCATGTCTTTGTTTT+TGG	-	chr1_4:22089623-22089642	None:intergenic	30.0%
!!	GGTTTGTTATGTTGATCATA+GGG	-	chr1_4:22089651-22089670	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	-	chr1_4:22089778-22089797	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	+	chr1_4:22089788-22089807	Msa0156250:CDS	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	-	chr1_4:22089909-22089928	None:intergenic	30.0%
!	ACTCAGATTTGTCCATTTTA+TGG	+	chr1_4:22089931-22089950	Msa0156250:CDS	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	-	chr1_4:22090201-22090220	None:intergenic	30.0%
	TTATAGTAGGATGTGATCAT+AGG	+	chr1_4:22090386-22090405	Msa0156250:intron	30.0%
	TATAGTAGGATGTGATCATA+GGG	+	chr1_4:22090387-22090406	Msa0156250:intron	30.0%
!	AACTTGCTTCTCAAATTCTT+TGG	-	chr1_4:22090490-22090509	None:intergenic	30.0%
	AGAATTTGAGAAGCAAGTTA+AGG	+	chr1_4:22090491-22090510	Msa0156250:intron	30.0%
	GAATTTGAGAAGCAAGTTAA+GGG	+	chr1_4:22090492-22090511	Msa0156250:intron	30.0%
	AAAAGTTTGACATTACTTGC+TGG	+	chr1_4:22090584-22090603	Msa0156250:intron	30.0%
	GTTAGAATATTCAGAGTCAT+TGG	+	chr1_4:22090800-22090819	Msa0156250:intron	30.0%
	CATATTGAGATTTCCTACAT+TGG	-	chr1_4:22090966-22090985	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	+	chr1_4:22091471-22091490	Msa0156250:three_prime_UTR	30.0%
!!	TTTTCTGATCTAGCTTGATT+TGG	-	chr1_4:22089538-22089557	None:intergenic	30.0%
!!!	GTTCATCATGTCTTTGTTTT+TGG	-	chr1_4:22089623-22089642	None:intergenic	30.0%
!!	GGTTTGTTATGTTGATCATA+GGG	-	chr1_4:22089651-22089670	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	-	chr1_4:22089778-22089797	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	+	chr1_4:22089788-22089807	Msa0156250:CDS	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	-	chr1_4:22089909-22089928	None:intergenic	30.0%
!	ACTCAGATTTGTCCATTTTA+TGG	+	chr1_4:22089931-22089950	Msa0156250:CDS	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	-	chr1_4:22090201-22090220	None:intergenic	30.0%
	TTATAGTAGGATGTGATCAT+AGG	+	chr1_4:22090386-22090405	Msa0156250:intron	30.0%
	TATAGTAGGATGTGATCATA+GGG	+	chr1_4:22090387-22090406	Msa0156250:intron	30.0%
!	AACTTGCTTCTCAAATTCTT+TGG	-	chr1_4:22090490-22090509	None:intergenic	30.0%
	AGAATTTGAGAAGCAAGTTA+AGG	+	chr1_4:22090491-22090510	Msa0156250:intron	30.0%
	GAATTTGAGAAGCAAGTTAA+GGG	+	chr1_4:22090492-22090511	Msa0156250:intron	30.0%
	AAAAGTTTGACATTACTTGC+TGG	+	chr1_4:22090584-22090603	Msa0156250:intron	30.0%
	GTTAGAATATTCAGAGTCAT+TGG	+	chr1_4:22090800-22090819	Msa0156250:intron	30.0%
	CATATTGAGATTTCCTACAT+TGG	-	chr1_4:22090966-22090985	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	+	chr1_4:22091471-22091490	Msa0156250:three_prime_UTR	30.0%
!!!	TTTGGTTTTTGAAGCTTGGT+AGG	-	chr1_4:22089480-22089499	None:intergenic	35.0%
!!	GGGTTTGTTATGTTGATCAT+AGG	-	chr1_4:22089652-22089671	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	-	chr1_4:22089754-22089773	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	+	chr1_4:22089799-22089818	Msa0156250:CDS	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	-	chr1_4:22089903-22089922	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	+	chr1_4:22089903-22089922	Msa0156250:CDS	35.0%
	GGATTTGGATGTCCATAAAA+TGG	-	chr1_4:22089946-22089965	None:intergenic	35.0%
	GTAGTTGCATTATTTGATGG+TGG	-	chr1_4:22090198-22090217	None:intergenic	35.0%
	AGCTGTTACTAGCAAAAGAA+AGG	+	chr1_4:22090443-22090462	Msa0156250:intron	35.0%
!	AGAAAGGAAATAAGTTGAGC+TGG	+	chr1_4:22090459-22090478	Msa0156250:intron	35.0%
!	GAAAGGAAATAAGTTGAGCT+GGG	+	chr1_4:22090460-22090479	Msa0156250:intron	35.0%
	TCATGCATATCCTATGTCAT+TGG	-	chr1_4:22090918-22090937	None:intergenic	35.0%
!	CGTCACGGTTTTTAATATTG+TGG	+	chr1_4:22091016-22091035	Msa0156250:intron	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	+	chr1_4:22091323-22091342	Msa0156250:three_prime_UTR	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	+	chr1_4:22091442-22091461	Msa0156250:three_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	-	chr1_4:22091483-22091502	None:intergenic	35.0%
!!!	TTTGGTTTTTGAAGCTTGGT+AGG	-	chr1_4:22089480-22089499	None:intergenic	35.0%
!!	GGGTTTGTTATGTTGATCAT+AGG	-	chr1_4:22089652-22089671	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	-	chr1_4:22089754-22089773	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	+	chr1_4:22089799-22089818	Msa0156250:CDS	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	-	chr1_4:22089903-22089922	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	+	chr1_4:22089903-22089922	Msa0156250:CDS	35.0%
	GGATTTGGATGTCCATAAAA+TGG	-	chr1_4:22089946-22089965	None:intergenic	35.0%
	GTAGTTGCATTATTTGATGG+TGG	-	chr1_4:22090198-22090217	None:intergenic	35.0%
	AGCTGTTACTAGCAAAAGAA+AGG	+	chr1_4:22090443-22090462	Msa0156250:intron	35.0%
!	AGAAAGGAAATAAGTTGAGC+TGG	+	chr1_4:22090459-22090478	Msa0156250:intron	35.0%
!	GAAAGGAAATAAGTTGAGCT+GGG	+	chr1_4:22090460-22090479	Msa0156250:intron	35.0%
	TCATGCATATCCTATGTCAT+TGG	-	chr1_4:22090918-22090937	None:intergenic	35.0%
!	CGTCACGGTTTTTAATATTG+TGG	+	chr1_4:22091016-22091035	Msa0156250:intron	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	+	chr1_4:22091323-22091342	Msa0156250:three_prime_UTR	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	+	chr1_4:22091442-22091461	Msa0156250:three_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	-	chr1_4:22091483-22091502	None:intergenic	35.0%
!!!	AGGGTTTGGTTTTTGAAGCT+TGG	-	chr1_4:22089484-22089503	None:intergenic	40.0%
	TCATCGTCATCGATGATGAT+GGG	-	chr1_4:22089672-22089691	None:intergenic	40.0%
	TGTTGTAGATGACGATGGTA+TGG	-	chr1_4:22089695-22089714	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	-	chr1_4:22089751-22089770	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	+	chr1_4:22090004-22090023	Msa0156250:CDS	40.0%
!!!	AGAGCTGCTTTTGAAGAGAA+TGG	+	chr1_4:22090033-22090052	Msa0156250:CDS	40.0%
!!	CTGCTTTTGAAGAGAATGGT+GGG	+	chr1_4:22090037-22090056	Msa0156250:CDS	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	+	chr1_4:22090060-22090079	Msa0156250:CDS	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	+	chr1_4:22090098-22090117	Msa0156250:CDS	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	+	chr1_4:22090120-22090139	Msa0156250:CDS	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	-	chr1_4:22090195-22090214	None:intergenic	40.0%
	ATTCTTGCACTACCAACACA+TGG	-	chr1_4:22090325-22090344	None:intergenic	40.0%
	GAACGGTTCAAAATTCAAGC+CGG	-	chr1_4:22090886-22090905	None:intergenic	40.0%
	GTCATTGGATCGACATTGAA+CGG	-	chr1_4:22090903-22090922	None:intergenic	40.0%
	CAATGTCGATCCAATGACAT+AGG	+	chr1_4:22090905-22090924	Msa0156250:intron	40.0%
	CAACAATATCAACTGCGTCA+CGG	+	chr1_4:22091001-22091020	Msa0156250:intron	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	+	chr1_4:22091322-22091341	Msa0156250:intron	40.0%
	TGCAGTGTGAGATATGCAAA+TGG	+	chr1_4:22091351-22091370	Msa0156250:three_prime_UTR	40.0%
	TATGCAAATGGAAACTGCAG+TGG	+	chr1_4:22091363-22091382	Msa0156250:three_prime_UTR	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	+	chr1_4:22091441-22091460	Msa0156250:three_prime_UTR	40.0%
!!!	AGGGTTTGGTTTTTGAAGCT+TGG	-	chr1_4:22089484-22089503	None:intergenic	40.0%
	TCATCGTCATCGATGATGAT+GGG	-	chr1_4:22089672-22089691	None:intergenic	40.0%
	TGTTGTAGATGACGATGGTA+TGG	-	chr1_4:22089695-22089714	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	-	chr1_4:22089751-22089770	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	+	chr1_4:22090004-22090023	Msa0156250:CDS	40.0%
!!!	AGAGCTGCTTTTGAAGAGAA+TGG	+	chr1_4:22090033-22090052	Msa0156250:CDS	40.0%
!!	CTGCTTTTGAAGAGAATGGT+GGG	+	chr1_4:22090037-22090056	Msa0156250:CDS	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	+	chr1_4:22090060-22090079	Msa0156250:CDS	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	+	chr1_4:22090098-22090117	Msa0156250:CDS	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	+	chr1_4:22090120-22090139	Msa0156250:CDS	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	-	chr1_4:22090195-22090214	None:intergenic	40.0%
	ATTCTTGCACTACCAACACA+TGG	-	chr1_4:22090325-22090344	None:intergenic	40.0%
	GAACGGTTCAAAATTCAAGC+CGG	-	chr1_4:22090886-22090905	None:intergenic	40.0%
	GTCATTGGATCGACATTGAA+CGG	-	chr1_4:22090903-22090922	None:intergenic	40.0%
	CAATGTCGATCCAATGACAT+AGG	+	chr1_4:22090905-22090924	Msa0156250:intron	40.0%
	CAACAATATCAACTGCGTCA+CGG	+	chr1_4:22091001-22091020	Msa0156250:intron	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	+	chr1_4:22091322-22091341	Msa0156250:intron	40.0%
	TGCAGTGTGAGATATGCAAA+TGG	+	chr1_4:22091351-22091370	Msa0156250:three_prime_UTR	40.0%
	TATGCAAATGGAAACTGCAG+TGG	+	chr1_4:22091363-22091382	Msa0156250:three_prime_UTR	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	+	chr1_4:22091441-22091460	Msa0156250:three_prime_UTR	40.0%
	GTCATCGTCATCGATGATGA+TGG	-	chr1_4:22089673-22089692	None:intergenic	45.0%
	GCTGATGTTGTAGATGACGA+TGG	-	chr1_4:22089700-22089719	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	-	chr1_4:22089728-22089747	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	-	chr1_4:22089734-22089753	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	-	chr1_4:22089831-22089850	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	-	chr1_4:22089840-22089859	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	-	chr1_4:22089850-22089869	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	+	chr1_4:22089850-22089869	Msa0156250:CDS	45.0%
	TTGCGTTACCTCGACCAATT+TGG	+	chr1_4:22089892-22089911	Msa0156250:CDS	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	+	chr1_4:22090003-22090022	Msa0156250:CDS	45.0%
!!!	GCTGCTTTTGAAGAGAATGG+TGG	+	chr1_4:22090036-22090055	Msa0156250:CDS	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	-	chr1_4:22090066-22090085	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	+	chr1_4:22090097-22090116	Msa0156250:CDS	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	-	chr1_4:22090189-22090208	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	-	chr1_4:22090192-22090211	None:intergenic	45.0%
!	AGGAAATAAGTTGAGCTGGG+AGG	+	chr1_4:22090463-22090482	Msa0156250:intron	45.0%
!	GGAAATAAGTTGAGCTGGGA+GGG	+	chr1_4:22090464-22090483	Msa0156250:intron	45.0%
!	ACGGCATGAATGCGCATTTT+TGG	-	chr1_4:22090782-22090801	None:intergenic	45.0%
!	TGCGAGCTTTTCTCCAATGT+AGG	+	chr1_4:22090950-22090969	Msa0156250:intron	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	-	chr1_4:22091107-22091126	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	+	chr1_4:22091104-22091123	Msa0156250:intron	45.0%
	GTCATCGTCATCGATGATGA+TGG	-	chr1_4:22089673-22089692	None:intergenic	45.0%
	GCTGATGTTGTAGATGACGA+TGG	-	chr1_4:22089700-22089719	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	-	chr1_4:22089728-22089747	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	-	chr1_4:22089734-22089753	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	-	chr1_4:22089831-22089850	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	-	chr1_4:22089840-22089859	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	-	chr1_4:22089850-22089869	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	+	chr1_4:22089850-22089869	Msa0156250:CDS	45.0%
	TTGCGTTACCTCGACCAATT+TGG	+	chr1_4:22089892-22089911	Msa0156250:CDS	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	+	chr1_4:22090003-22090022	Msa0156250:CDS	45.0%
!!!	GCTGCTTTTGAAGAGAATGG+TGG	+	chr1_4:22090036-22090055	Msa0156250:CDS	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	-	chr1_4:22090066-22090085	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	+	chr1_4:22090097-22090116	Msa0156250:CDS	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	-	chr1_4:22090189-22090208	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	-	chr1_4:22090192-22090211	None:intergenic	45.0%
!	AGGAAATAAGTTGAGCTGGG+AGG	+	chr1_4:22090463-22090482	Msa0156250:intron	45.0%
!	GGAAATAAGTTGAGCTGGGA+GGG	+	chr1_4:22090464-22090483	Msa0156250:intron	45.0%
!	ACGGCATGAATGCGCATTTT+TGG	-	chr1_4:22090782-22090801	None:intergenic	45.0%
!	TGCGAGCTTTTCTCCAATGT+AGG	+	chr1_4:22090950-22090969	Msa0156250:intron	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	-	chr1_4:22091107-22091126	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	+	chr1_4:22091104-22091123	Msa0156250:intron	45.0%
	CAACGTGAGAGTGAAAGTGG+TGG	-	chr1_4:22089847-22089866	None:intergenic	50.0%
	CGAGGTAACGCAAGAACTCA+AGG	-	chr1_4:22089885-22089904	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	-	chr1_4:22090107-22090126	None:intergenic	50.0%
	GCACAGGAGTGAAAGACAAG+CGG	-	chr1_4:22091152-22091171	None:intergenic	50.0%
	ATGGAAACTGCAGTGGAAGC+TGG	+	chr1_4:22091370-22091389	Msa0156250:three_prime_UTR	50.0%
	TGGAAACTGCAGTGGAAGCT+GGG	+	chr1_4:22091371-22091390	Msa0156250:three_prime_UTR	50.0%
	CAACGTGAGAGTGAAAGTGG+TGG	-	chr1_4:22089847-22089866	None:intergenic	50.0%
	CGAGGTAACGCAAGAACTCA+AGG	-	chr1_4:22089885-22089904	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	-	chr1_4:22090107-22090126	None:intergenic	50.0%
	GCACAGGAGTGAAAGACAAG+CGG	-	chr1_4:22091152-22091171	None:intergenic	50.0%
	ATGGAAACTGCAGTGGAAGC+TGG	+	chr1_4:22091370-22091389	Msa0156250:three_prime_UTR	50.0%
	TGGAAACTGCAGTGGAAGCT+GGG	+	chr1_4:22091371-22091390	Msa0156250:three_prime_UTR	50.0%
!	GGACATGGTGCAGGTGGATT+TGG	-	chr1_4:22089961-22089980	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	-	chr1_4:22089970-22089989	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	-	chr1_4:22089976-22089995	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	+	chr1_4:22089981-22090000	Msa0156250:CDS	55.0%
	CATCAAGACTACCCCACGCT+TGG	-	chr1_4:22089996-22090015	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	-	chr1_4:22090078-22090097	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	-	chr1_4:22090186-22090205	None:intergenic	55.0%
!	GGACATGGTGCAGGTGGATT+TGG	-	chr1_4:22089961-22089980	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	-	chr1_4:22089970-22089989	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	-	chr1_4:22089976-22089995	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	+	chr1_4:22089981-22090000	Msa0156250:CDS	55.0%
	CATCAAGACTACCCCACGCT+TGG	-	chr1_4:22089996-22090015	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	-	chr1_4:22090078-22090097	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	-	chr1_4:22090186-22090205	None:intergenic	55.0%
	GGACAAGGACATGGTGCAGG+TGG	-	chr1_4:22089967-22089986	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	-	chr1_4:22089982-22090001	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	+	chr1_4:22089980-22089999	Msa0156250:CDS	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	+	chr1_4:22089982-22090001	Msa0156250:CDS	60.0%
	GGACAAGGACATGGTGCAGG+TGG	-	chr1_4:22089967-22089986	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	-	chr1_4:22089982-22090001	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	+	chr1_4:22089980-22089999	Msa0156250:CDS	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	+	chr1_4:22089982-22090001	Msa0156250:CDS	60.0%
	CTACCCCACGCTTGGCGAAG+AGG	-	chr1_4:22089988-22090007	None:intergenic	65.0%
	CTACCCCACGCTTGGCGAAG+AGG	-	chr1_4:22089988-22090007	None:intergenic	65.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	-	chr1_4:22090177-22090196	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	-	chr1_4:22090180-22090199	None:intergenic	75.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	-	chr1_4:22090177-22090196	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	-	chr1_4:22090180-22090199	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	22089417	22091600	22089417	ID=Msa0156250;Name=Msa0156250
chr1_4	mRNA	22089417	22091600	22089417	ID=Msa0156250-mRNA-1;Parent=Msa0156250;Name=Msa0156250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=172\|0\|0.5\|1\|0\|0.5\|2\|278\|214
chr1_4	exon	22089417	22090233	22089417	ID=Msa0156250-mRNA-1:exon:7962;Parent=Msa0156250-mRNA-1
chr1_4	exon	22091323	22091600	22091323	ID=Msa0156250-mRNA-1:exon:7963;Parent=Msa0156250-mRNA-1
chr1_4	five_prime_UTR	22089417	22089588	22089417	ID=Msa0156250-mRNA-1:five_prime_utr;Parent=Msa0156250-mRNA-1
chr1_4	CDS	22089589	22090233	22089589	ID=Msa0156250-mRNA-1:cds;Parent=Msa0156250-mRNA-1
chr1_4	three_prime_UTR	22091323	22091600	22091323	ID=Msa0156250-mRNA-1:three_prime_utr;Parent=Msa0156250-mRNA-1

Gene Sequence

>Msa0156250

ATGAATTCTCTTCAAGAATTTGAATCATCAACCAAAAACAAAGACATGATGAACACAAACCCTATGATCAACATAACAAACCCATCATCATCGATGACGATGACCATACCATCGTCATCTACAACATCAGCATCATCCTCGTCCACAACAACAACATCACCTCCATCAACAACATCAACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTTTCACTCTCACGTTGTAGTGGAGCTCATGTCCTTGAGTTCTTGCGTTACCTCGACCAATTTGGAAAAACAAAGGTTCACACTCAGATTTGTCCATTTTATGGACATCCAAATCCACCTGCACCATGTCCTTGTCCTCTTCGCCAAGCGTGGGGTAGTCTTGATGCACTCATTGGGAGACTTAGAGCTGCTTTTGAAGAGAATGGTGGGAAGCCAGAAGCTAATCCTTTTGGTGCTCGTGCTGTTCGACTTTACCTTCGCGAAGTTAGGGATTCTCAAGCTAAAGCTAGAGGTATTAGTTATGAGAAAAAGAAGCGCAAGCGTCCGCCTCAGCCGCCACCACCACCACCATCAAATAATGCAACTACAACTGATCTTCACTAG

Protein sequence

>Msa0156250

MNSLQEFESSTKNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTTTTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPPSNNATTTDLH*