Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270560 | XP_003610300.1 | 92.308 | 377 | 22 | 3 | 28 | 404 | 4 | 373 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270560 | sp|Q8GSJ1|HIS1B_ARATH | 83.824 | 340 | 55 | 0 | 65 | 404 | 74 | 413 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270560 | G7JFL4 | 92.308 | 377 | 22 | 3 | 28 | 404 | 4 | 373 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0091550 | Msa0270560 | 0.806534 | 7.852774e-50 | -8.615850e-47 |
| Msa0188430 | Msa0270560 | 0.880163 | 6.884127e-70 | -8.615850e-47 |
| Msa0190520 | Msa0270560 | 0.803419 | 3.517859e-49 | -8.615850e-47 |
| Msa0231040 | Msa0270560 | 0.806170 | 9.369999e-50 | -8.615850e-47 |
| Msa0270560 | Msa0308990 | 0.877014 | 8.823053e-69 | -8.615850e-47 |
| Msa0270560 | Msa0311260 | 0.817697 | 2.882251e-52 | -8.615850e-47 |
| Msa0270560 | Msa0365110 | 0.801260 | 9.790857e-49 | -8.615850e-47 |
| Msa0270560 | Msa0486200 | 0.818519 | 1.879441e-52 | -8.615850e-47 |
| Msa0270560 | Msa0515090 | 0.811910 | 5.526598e-51 | -8.615850e-47 |
| Msa0270560 | Msa0829820 | 0.816360 | 5.757250e-52 | -8.615850e-47 |
| Msa0270560 | Msa1011240 | 0.811466 | 6.904969e-51 | -8.615850e-47 |
| Msa0270560 | Msa1075120 | 0.800967 | 1.124236e-48 | -8.615850e-47 |
| Msa0270560 | Msa1254210 | 0.805916 | 1.059623e-49 | -8.615850e-47 |
| Msa0270560 | Msa1274740 | 0.805828 | 1.105425e-49 | -8.615850e-47 |
| Msa0270560 | Msa1275290 | 0.801445 | 8.975458e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270560 | MtrunA17_Chr4g0073831 | 92.308 | 377 | 22 | 3 | 28 | 404 | 4 | 373 | 0.0 | 706 |
| Msa0270560 | MtrunA17_Chr2g0277331 | 81.752 | 411 | 24 | 6 | 28 | 404 | 6 | 399 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270560 | AT1G09795.1 | 83.824 | 340 | 55 | 0 | 65 | 404 | 74 | 413 | 0.0 | 609 |
| Msa0270560 | AT1G58080.1 | 76.486 | 370 | 79 | 1 | 43 | 404 | 42 | 411 | 0.0 | 592 |
Find 130 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATATATGTGTTCCATTTA+TGG | 0.114201 | 2_3:-1777705 | Msa0270560:three_prime_UTR |
| CCATTATCTTTCATAAATTT+AGG | 0.178616 | 2_3:+1780077 | None:intergenic |
| TTCTGCATTGATAGTATCTT+TGG | 0.181524 | 2_3:+1777659 | None:intergenic |
| CTTGATATACTCACTGAATT+TGG | 0.209989 | 2_3:-1781490 | Msa0270560:CDS |
| ATCTCTTTCCTGGCGGAGAC+TGG | 0.219395 | 2_3:+1781836 | None:intergenic |
| ACAACAAACTACTCCATAAA+TGG | 0.220482 | 2_3:+1777692 | None:intergenic |
| GAAACTCAAGTACTCCTTAA+TGG | 0.221771 | 2_3:-1781863 | Msa0270560:CDS |
| CGGAGACTGGGTTTCCATTA+AGG | 0.239700 | 2_3:+1781849 | None:intergenic |
| ACCATCATTGGCTGGGTTGC+AGG | 0.240929 | 2_3:-1778499 | Msa0270560:intron |
| AATTGAAGGTGGAACTGTTT+TGG | 0.258121 | 2_3:-1778908 | Msa0270560:CDS |
| AGCTTTCCAACTTGGAAGTA+TGG | 0.273300 | 2_3:-1781579 | Msa0270560:CDS |
| GACTTGTACAATGCCTTCTT+TGG | 0.281592 | 2_3:+1778215 | None:intergenic |
| CCACTTCTGCATCGGCTTGT+AGG | 0.290273 | 2_3:-1777581 | Msa0270560:three_prime_UTR |
| TCTGCATTGATAGTATCTTT+GGG | 0.295957 | 2_3:+1777660 | None:intergenic |
| AACGAAATTGCATTTCTTGC+TGG | 0.297884 | 2_3:-1777619 | Msa0270560:three_prime_UTR |
| CAATTTACTGCTTGCTGAAC+AGG | 0.300223 | 2_3:+1781920 | None:intergenic |
| CGCCAGCTCCTTTCTAAACT+TGG | 0.303940 | 2_3:-1777735 | Msa0270560:CDS |
| CCTAAATTTATGAAAGATAA+TGG | 0.318633 | 2_3:-1780077 | Msa0270560:CDS |
| ACTTATCTAACCAAGTATTA+TGG | 0.318977 | 2_3:+1777513 | None:intergenic |
| AGTTAAAACCAAATAATAAA+AGG | 0.329757 | 2_3:-1782142 | Msa0270560:five_prime_UTR |
| AGAAAGGAGCTGGCGCCATC+TGG | 0.330813 | 2_3:+1777743 | None:intergenic |
| CATTCAGATAGTAGTAATAT+TGG | 0.333635 | 2_3:-1781990 | Msa0270560:CDS |
| CTTTGGCACACATATGACTA+TGG | 0.334395 | 2_3:+1778232 | None:intergenic |
| TTGTTTCAGATTCCTCAGTA+TGG | 0.337830 | 2_3:-1780305 | Msa0270560:intron |
| CTTGTTTGATTAACTAATGC+TGG | 0.342865 | 2_3:+1777315 | None:intergenic |
| GTGCACGAGGCTTTGGAGTA+TGG | 0.349565 | 2_3:-1780424 | Msa0270560:CDS |
| ACGATGATGATGAGCCAAAT+TGG | 0.350592 | 2_3:-1781950 | Msa0270560:CDS |
| ACCAAGACGGATCTCTTTCC+TGG | 0.352781 | 2_3:+1781826 | None:intergenic |
| TATCATTGTGCACGAGGCTT+TGG | 0.356493 | 2_3:-1780431 | Msa0270560:CDS |
| GAACAGGAGTGAAACCAATT+TGG | 0.368425 | 2_3:+1781936 | None:intergenic |
| TTTAACTTCAACATTGTTGT+TGG | 0.383014 | 2_3:-1777470 | Msa0270560:three_prime_UTR |
| TCATGAGATGCTTGAAAGAT+TGG | 0.385558 | 2_3:-1778689 | Msa0270560:CDS |
| TCCATCACGCTTGCAGAAAA+CGG | 0.387763 | 2_3:+1778277 | None:intergenic |
| AATAATAAAAGGAGAGAAAG+AGG | 0.388615 | 2_3:-1782131 | Msa0270560:five_prime_UTR |
| GGGAATTGCTGATGCTATCT+TGG | 0.397741 | 2_3:-1778977 | Msa0270560:CDS |
| TTCATAAATTGAAGAGGAGG+AGG | 0.403307 | 2_3:+1781883 | None:intergenic |
| CCATCACGCTTGCAGAAAAC+GGG | 0.416870 | 2_3:+1778278 | None:intergenic |
| ATTGAAAGAAAATAACTTGA+AGG | 0.424383 | 2_3:-1778932 | Msa0270560:CDS |
| ATGTGAAATTAGAAATTTGC+GGG | 0.426209 | 2_3:-1777343 | Msa0270560:three_prime_UTR |
| GAGGCACATCTGAGGGCGAT+GGG | 0.428682 | 2_3:-1778667 | Msa0270560:CDS |
| ATAAATTGAAGAGGAGGAGG+AGG | 0.430961 | 2_3:+1781886 | None:intergenic |
| TAATACTTGGTTAGATAAGT+AGG | 0.438205 | 2_3:-1777510 | Msa0270560:three_prime_UTR |
| CAGAAGAAAGAAACAGAAAG+AGG | 0.441421 | 2_3:-1782087 | Msa0270560:five_prime_UTR |
| TTGTTGTTGGAGTTATACTA+TGG | 0.447465 | 2_3:-1777457 | Msa0270560:three_prime_UTR |
| ATTGTAAGAAAATTGTTATC+CGG | 0.447935 | 2_3:-1781538 | Msa0270560:CDS |
| TTAATTCTGTCCATAATACT+TGG | 0.449057 | 2_3:-1777523 | Msa0270560:three_prime_UTR |
| GGAGGCACATCTGAGGGCGA+TGG | 0.453025 | 2_3:-1778668 | Msa0270560:CDS |
| TCTCTTTCCTGGCGGAGACT+GGG | 0.457663 | 2_3:+1781837 | None:intergenic |
| AGGCTGCTCTTGTTGCGAGC+AGG | 0.461210 | 2_3:-1778750 | Msa0270560:CDS |
| AATTTGAGCAACATACTGTC+TGG | 0.464852 | 2_3:+1781724 | None:intergenic |
| AGTACTGAGCCAACCATCAT+TGG | 0.465847 | 2_3:-1778511 | Msa0270560:CDS |
| AGGAAGCAGTGCAGAGGAAG+TGG | 0.466330 | 2_3:-1778541 | Msa0270560:CDS |
| GAGGGCGATGGGGCAGTTCA+CGG | 0.466433 | 2_3:-1778656 | Msa0270560:intron |
| TACACTCCAGCTTTCCAACT+TGG | 0.467279 | 2_3:-1781587 | Msa0270560:intron |
| AAGCCTCTGAGAGTTGCAAC+TGG | 0.474293 | 2_3:-1780221 | Msa0270560:CDS |
| CTGAGCCAACCATCATTGGC+TGG | 0.475399 | 2_3:-1778507 | Msa0270560:CDS |
| CTGCATTGATAGTATCTTTG+GGG | 0.479892 | 2_3:+1777661 | None:intergenic |
| AATACTTGGTTAGATAAGTA+GGG | 0.485402 | 2_3:-1777509 | Msa0270560:three_prime_UTR |
| ATGTAGTTCCACTACTTACA+AGG | 0.491288 | 2_3:+1778953 | None:intergenic |
| AATTGAAGAGGAGGAGGAGG+AGG | 0.494615 | 2_3:+1781889 | None:intergenic |
| AGTCATATGTGTGCCAAAGA+AGG | 0.500447 | 2_3:-1778228 | Msa0270560:CDS |
| AAATCGATGATTGGACGAAA+AGG | 0.502489 | 2_3:-1778727 | Msa0270560:CDS |
| GTATGTTGCTCAAATTCCTC+AGG | 0.503647 | 2_3:-1781717 | Msa0270560:intron |
| CTGAAACCATACTTCCAAGT+TGG | 0.505934 | 2_3:+1781573 | None:intergenic |
| TTGTTTGATTAACTAATGCT+GGG | 0.508108 | 2_3:+1777316 | None:intergenic |
| GATACCAAGGTCAAGATCTC+CGG | 0.510734 | 2_3:+1781519 | None:intergenic |
| GAAGACATCCGACCTTTGCT+TGG | 0.511677 | 2_3:+1781800 | None:intergenic |
| TTCGACTGCTGATGGAGCAC+TGG | 0.513957 | 2_3:-1780036 | Msa0270560:CDS |
| ACTATAGTCCAAGTTTAGAA+AGG | 0.521278 | 2_3:+1777727 | None:intergenic |
| GTCCAAGTTTAGAAAGGAGC+TGG | 0.532328 | 2_3:+1777733 | None:intergenic |
| TTAGTTAATCAAACAAGTGA+AGG | 0.533555 | 2_3:-1777309 | Msa0270560:three_prime_UTR |
| ATGGAAACCCAGTCTCCGCC+AGG | 0.536174 | 2_3:-1781844 | Msa0270560:CDS |
| GCGAGCAGGAAATCGATGAT+TGG | 0.536182 | 2_3:-1778736 | Msa0270560:CDS |
| GAAAGGAGCTGGCGCCATCT+GGG | 0.539669 | 2_3:+1777744 | None:intergenic |
| GCCAGGAAAGAGATCCGTCT+TGG | 0.542357 | 2_3:-1781827 | Msa0270560:CDS |
| ACCTGCAACCCAGCCAATGA+TGG | 0.542827 | 2_3:+1778498 | None:intergenic |
| TTATCCGGAGATCTTGACCT+TGG | 0.545845 | 2_3:-1781523 | Msa0270560:CDS |
| AATAACTTGAAGGAAATTGA+AGG | 0.546732 | 2_3:-1778922 | Msa0270560:CDS |
| CGTCTTGGTTTGCCAAGCAA+AGG | 0.547016 | 2_3:-1781812 | Msa0270560:CDS |
| TGAGATGCTTGAAAGATTGG+AGG | 0.547977 | 2_3:-1778686 | Msa0270560:CDS |
| CCTACAAGCCGATGCAGAAG+TGG | 0.550151 | 2_3:+1777581 | None:intergenic |
| TATACTCACTGAATTTGGCC+AGG | 0.550883 | 2_3:-1781485 | Msa0270560:intron |
| ATTTGAGCAACATACTGTCT+GGG | 0.552782 | 2_3:+1781725 | None:intergenic |
| ATCTTGGACCTTGTAAGTAG+TGG | 0.552901 | 2_3:-1778961 | Msa0270560:CDS |
| AGCACTGGAGGCAGCTCCTG+CGG | 0.560029 | 2_3:-1780021 | Msa0270560:intron |
| TTGAGTTTCATAAATTGAAG+AGG | 0.563607 | 2_3:+1781877 | None:intergenic |
| TGACACACTCGACCTTCTCA+AGG | 0.565584 | 2_3:-1781777 | Msa0270560:CDS |
| AGTTTCATAAATTGAAGAGG+AGG | 0.570962 | 2_3:+1781880 | None:intergenic |
| GACTGCTGATGGAGCACTGG+AGG | 0.576762 | 2_3:-1780033 | Msa0270560:CDS |
| AGATATTCCCACTTCTGCAT+CGG | 0.578518 | 2_3:-1777589 | Msa0270560:three_prime_UTR |
| TTTCTGCAAGCGTGATGGAA+AGG | 0.581353 | 2_3:-1778273 | Msa0270560:CDS |
| TTCCACCTACCTCAATGAGC+TGG | 0.583516 | 2_3:-1777394 | Msa0270560:three_prime_UTR |
| TGAAAATGTAAATTCACTAG+AGG | 0.584392 | 2_3:-1780276 | Msa0270560:CDS |
| GATCTTGACCTTGGTATCGT+AGG | 0.585932 | 2_3:-1781514 | Msa0270560:CDS |
| GTTCATATGATGCAGATTGG+AGG | 0.586050 | 2_3:-1777816 | Msa0270560:intron |
| CGATCTTATCATTGTGCACG+AGG | 0.586126 | 2_3:-1780437 | Msa0270560:CDS |
| AAAGATTGGAGGCACATCTG+AGG | 0.586441 | 2_3:-1778675 | Msa0270560:CDS |
| AAGATTGGAGGCACATCTGA+GGG | 0.587964 | 2_3:-1778674 | Msa0270560:CDS |
| AGAAGAAAGAAACAGAAAGA+GGG | 0.589280 | 2_3:-1782086 | Msa0270560:five_prime_UTR |
| TGAGCCAACCATCATTGGCT+GGG | 0.591014 | 2_3:-1778506 | Msa0270560:CDS |
| GAAATTAGAAATTTGCGGGA+TGG | 0.591843 | 2_3:-1777339 | Msa0270560:three_prime_UTR |
| TGCATTGATAGTATCTTTGG+GGG | 0.595193 | 2_3:+1777662 | None:intergenic |
| ACTTGGAAGTATGGTTTCAG+AGG | 0.598140 | 2_3:-1781570 | Msa0270560:CDS |
| CATGTGAAATTAGAAATTTG+CGG | 0.601685 | 2_3:-1777344 | Msa0270560:three_prime_UTR |
| GCAACCCAGCCAATGATGGT+TGG | 0.605047 | 2_3:+1778502 | None:intergenic |
| ATGATGCAGATTGGAGGCAG+CGG | 0.611608 | 2_3:-1777810 | Msa0270560:intron |
| TTGGTTTGCCAAGCAAAGGT+CGG | 0.612452 | 2_3:-1781808 | Msa0270560:CDS |
| GCAGAAAACGGGACTTACAG+TGG | 0.618700 | 2_3:+1778289 | None:intergenic |
| GATGACCAGCTCATTGAGGT+AGG | 0.621980 | 2_3:+1777389 | None:intergenic |
| CTTTGCTTGGCAAACCAAGA+CGG | 0.625476 | 2_3:+1781813 | None:intergenic |
| AATCCAGTTGCAACTCTCAG+AGG | 0.625497 | 2_3:+1780218 | None:intergenic |
| TATGAGAGGAAGCAGTGCAG+AGG | 0.626577 | 2_3:-1778547 | Msa0270560:CDS |
| AGATAATGGCATTAAGCATG+TGG | 0.627844 | 2_3:-1780063 | Msa0270560:CDS |
| TTGATGAGGAAACTCCCAGA+TGG | 0.630461 | 2_3:-1777758 | Msa0270560:CDS |
| AGGCACATCTGAGGGCGATG+GGG | 0.631283 | 2_3:-1778666 | Msa0270560:CDS |
| ATAATAAAAGGAGAGAAAGA+GGG | 0.631921 | 2_3:-1782130 | Msa0270560:five_prime_UTR |
| GACCAGCTCATTGAGGTAGG+TGG | 0.635644 | 2_3:+1777392 | None:intergenic |
| TAGTTAATCAAACAAGTGAA+GGG | 0.635773 | 2_3:-1777308 | Msa0270560:three_prime_UTR |
| GTCTATACAGCAATTGAGAG+CGG | 0.638210 | 2_3:-1778195 | Msa0270560:intron |
| CAGGTCACTGCAAATATGAG+AGG | 0.643908 | 2_3:-1778561 | Msa0270560:CDS |
| CTACAAGCCGATGCAGAAGT+GGG | 0.646815 | 2_3:+1777582 | None:intergenic |
| ATAAGATGACCAGCTCATTG+AGG | 0.648580 | 2_3:+1777385 | None:intergenic |
| AACTTGAAGGAAATTGAAGG+TGG | 0.649831 | 2_3:-1778919 | Msa0270560:CDS |
| TGATTGTCGTTTATCCATTG+CGG | 0.655142 | 2_3:-1780401 | Msa0270560:intron |
| ATACTTGGTTAGATAAGTAG+GGG | 0.656405 | 2_3:-1777508 | Msa0270560:three_prime_UTR |
| CAGAAAACGGGACTTACAGT+GGG | 0.660083 | 2_3:+1778290 | None:intergenic |
| ACAATTGACAGTCCTTGAGA+AGG | 0.663029 | 2_3:+1781765 | None:intergenic |
| TATCAAGTCCTACGATACCA+AGG | 0.676300 | 2_3:+1781506 | None:intergenic |
| TACTTGGTTAGATAAGTAGG+GGG | 0.701332 | 2_3:-1777507 | Msa0270560:three_prime_UTR |
| AAGACGGATCTCTTTCCTGG+CGG | 0.740099 | 2_3:+1781829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTAATTATACTAAATAT+AGG | + | chr2_3:1778589-1778608 | None:intergenic | 10.0% |
| !!! | GTTTAACTTTTAAATTTTGT+TGG | + | chr2_3:1778558-1778577 | None:intergenic | 15.0% |
| !! | TTAGTATAATTAACATGAAT+TGG | - | chr2_3:1778593-1778612 | Msa0270560:intron | 15.0% |
| !!! | TTTAAAATCTGAAAACATAA+AGG | + | chr2_3:1779474-1779493 | None:intergenic | 15.0% |
| !! | CAAAATTTATCAAAAACTAT+AGG | + | chr2_3:1779581-1779600 | None:intergenic | 15.0% |
| !! | ATTGTTTAAGTAAAACAATT+AGG | - | chr2_3:1780017-1780036 | Msa0270560:intron | 15.0% |
| !! | TTGATCTAATTATAAATTTC+TGG | - | chr2_3:1780059-1780078 | Msa0270560:CDS | 15.0% |
| !! | AAAAATGACATGTGATAAAT+GGG | + | chr2_3:1777402-1777421 | None:intergenic | 20.0% |
| !!! | AATTTTCTTACAATGTCTTT+GGG | + | chr2_3:1777892-1777911 | None:intergenic | 20.0% |
| !! | ATTGTAAGAAAATTGTTATC+CGG | - | chr2_3:1777898-1777917 | Msa0270560:intron | 20.0% |
| !! | AATCATACAAAATTACTGTT+TGG | - | chr2_3:1778096-1778115 | Msa0270560:intron | 20.0% |
| !! | CATTTCTTTCAAATAAATGT+TGG | + | chr2_3:1778312-1778331 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTCTTTTTCTGT+AGG | - | chr2_3:1778418-1778437 | Msa0270560:intron | 20.0% |
| !! | ATAAAAAAAGTTAAGCTTAC+GGG | + | chr2_3:1778952-1778971 | None:intergenic | 20.0% |
| !! | CATAAAAAAAGTTAAGCTTA+CGG | + | chr2_3:1778953-1778972 | None:intergenic | 20.0% |
| !! | CCATTATCTTTCATAAATTT+AGG | + | chr2_3:1779362-1779381 | None:intergenic | 20.0% |
| !! | CCTAAATTTATGAAAGATAA+TGG | - | chr2_3:1779359-1779378 | Msa0270560:intron | 20.0% |
| !!! | AGATTATTTTCACATTTCAT+AGG | - | chr2_3:1779699-1779718 | Msa0270560:intron | 20.0% |
| !!! | TCAAATAAGAAAGTATAGAT+TGG | + | chr2_3:1779940-1779959 | None:intergenic | 20.0% |
| !!! | TCTATACTTTCTTATTTGAA+AGG | - | chr2_3:1779941-1779960 | Msa0270560:intron | 20.0% |
| !!! | CTATACTTTCTTATTTGAAA+GGG | - | chr2_3:1779942-1779961 | Msa0270560:intron | 20.0% |
| !!! | GAAATATTTTATATGGAAAG+AGG | + | chr2_3:1780276-1780295 | None:intergenic | 20.0% |
| !!! | TAACAGGGAAATATTTTATA+TGG | + | chr2_3:1780283-1780302 | None:intergenic | 20.0% |
| !! | AAAATGAATCAAAAAAGATC+AGG | + | chr2_3:1780409-1780428 | None:intergenic | 20.0% |
| !! | ATTGAAAGAAAATAACTTGA+AGG | - | chr2_3:1780504-1780523 | Msa0270560:intron | 20.0% |
| !!! | TATTTTTCTTGTTCTTAAGT+TGG | + | chr2_3:1781345-1781364 | None:intergenic | 20.0% |
| !! | ACAAGAAAAATAGAAAAGTA+AGG | - | chr2_3:1781353-1781372 | Msa0270560:intron | 20.0% |
| !! | TTATATATGTGTTCCATTTA+TGG | - | chr2_3:1781731-1781750 | Msa0270560:CDS | 20.0% |
| !! | CTTTCTCTCCTTTTATTATT+TGG | + | chr2_3:1777305-1777324 | None:intergenic | 25.0% |
| ! | AATAATAAAAGGAGAGAAAG+AGG | - | chr2_3:1777305-1777324 | Msa0270560:three_prime_UTR | 25.0% |
| ! | ATAATAAAAGGAGAGAAAGA+GGG | - | chr2_3:1777306-1777325 | Msa0270560:three_prime_UTR | 25.0% |
| ! | GAAAAATGACATGTGATAAA+TGG | + | chr2_3:1777403-1777422 | None:intergenic | 25.0% |
| ! | CATTCAGATAGTAGTAATAT+TGG | - | chr2_3:1777446-1777465 | Msa0270560:three_prime_UTR | 25.0% |
| ! | TTGAGTTTCATAAATTGAAG+AGG | + | chr2_3:1777562-1777581 | None:intergenic | 25.0% |
| !! | CAATTTTCTTACAATGTCTT+TGG | + | chr2_3:1777893-1777912 | None:intergenic | 25.0% |
| !! | TGTAATTTGTCACTAAGATA+GGG | + | chr2_3:1778237-1778256 | None:intergenic | 25.0% |
| ! | TTCTTTCAAATAAATGTTGG+AGG | + | chr2_3:1778309-1778328 | None:intergenic | 25.0% |
| !!! | AAGTTGGTATAACGTTTAAT+AGG | + | chr2_3:1778510-1778529 | None:intergenic | 25.0% |
| ! | TATTAAACGTTATACCAACT+TGG | - | chr2_3:1778509-1778528 | Msa0270560:CDS | 25.0% |
| !! | ATCTTGAAGCATTTCTAATT+AGG | + | chr2_3:1778732-1778751 | None:intergenic | 25.0% |
| ! | TGCATGTGTTAAAATTTAAC+AGG | - | chr2_3:1778805-1778824 | Msa0270560:intron | 25.0% |
| ! | TATGTTTATCATTCTTTGTC+AGG | - | chr2_3:1778969-1778988 | Msa0270560:CDS | 25.0% |
| ! | ATGTTTATCATTCTTTGTCA+GGG | - | chr2_3:1778970-1778989 | Msa0270560:CDS | 25.0% |
| ! | CAAAAAACAATGATACTGAT+AGG | + | chr2_3:1779087-1779106 | None:intergenic | 25.0% |
| !! | TTTTCAAATATTCCATACTG+AGG | + | chr2_3:1779146-1779165 | None:intergenic | 25.0% |
| ! | TGAAAATGTAAATTCACTAG+AGG | - | chr2_3:1779160-1779179 | Msa0270560:intron | 25.0% |
| ! | TTAGTTGAATGTGAATACAT+AGG | + | chr2_3:1779246-1779265 | None:intergenic | 25.0% |
| !! | TGTTTACCTTTTAAATGAGA+AGG | - | chr2_3:1779300-1779319 | Msa0270560:intron | 25.0% |
| ! | TTGAATCAAATGATAGCTAT+TGG | - | chr2_3:1779535-1779554 | Msa0270560:intron | 25.0% |
| ! | TGAATCAAATGATAGCTATT+GGG | - | chr2_3:1779536-1779555 | Msa0270560:intron | 25.0% |
| ! | ATAGCTTAATACACTAATCA+TGG | - | chr2_3:1779611-1779630 | Msa0270560:intron | 25.0% |
| !! | AATGGTTATCCTTGATTTTT+GGG | + | chr2_3:1779655-1779674 | None:intergenic | 25.0% |
| ! | TAGGATGAAAAACTGTAAAA+TGG | - | chr2_3:1779718-1779737 | Msa0270560:intron | 25.0% |
| ! | TAGTCAATATTCTGTATTCA+AGG | - | chr2_3:1779790-1779809 | Msa0270560:intron | 25.0% |
| !!! | AAATTTCTGGTTCATTTGAA+AGG | - | chr2_3:1780072-1780091 | Msa0270560:CDS | 25.0% |
| ! | AATAACTTGAAGGAAATTGA+AGG | - | chr2_3:1780514-1780533 | Msa0270560:intron | 25.0% |
| ! | ACAATAGATTGCAATAGTTA+AGG | + | chr2_3:1780586-1780605 | None:intergenic | 25.0% |
| ! | GCAAAAAGAAAATACAGAAA+AGG | + | chr2_3:1781020-1781039 | None:intergenic | 25.0% |
| !!! | TTTGAGTTTTCTATCAAAAG+AGG | - | chr2_3:1781296-1781315 | Msa0270560:intron | 25.0% |
| ! | TATCAAAAGAGGAATATTGT+TGG | - | chr2_3:1781307-1781326 | Msa0270560:intron | 25.0% |
| ! | ATCAAAAGAGGAATATTGTT+GGG | - | chr2_3:1781308-1781327 | Msa0270560:intron | 25.0% |
| ! | AATAGAAAAGTAAGGTTGAA+TGG | - | chr2_3:1781361-1781380 | Msa0270560:intron | 25.0% |
| ! | ATAGAAAAGTAAGGTTGAAT+GGG | - | chr2_3:1781362-1781381 | Msa0270560:intron | 25.0% |
| ! | TCATCAAAAATATAGGTCAA+GGG | + | chr2_3:1781665-1781684 | None:intergenic | 25.0% |
| ! | AGTTTCCTCATCAAAAATAT+AGG | + | chr2_3:1781672-1781691 | None:intergenic | 25.0% |
| ! | TTAATTCTGTCCATAATACT+TGG | - | chr2_3:1781913-1781932 | Msa0270560:CDS | 25.0% |
| ! | ACTTATCTAACCAAGTATTA+TGG | + | chr2_3:1781926-1781945 | None:intergenic | 25.0% |
| ! | TAATACTTGGTTAGATAAGT+AGG | - | chr2_3:1781926-1781945 | Msa0270560:CDS | 25.0% |
| ! | AATACTTGGTTAGATAAGTA+GGG | - | chr2_3:1781927-1781946 | Msa0270560:CDS | 25.0% |
| !! | TTTAACTTCAACATTGTTGT+TGG | - | chr2_3:1781966-1781985 | Msa0270560:CDS | 25.0% |
| ! | CATGTGAAATTAGAAATTTG+CGG | - | chr2_3:1782092-1782111 | Msa0270560:five_prime_UTR | 25.0% |
| ! | ATGTGAAATTAGAAATTTGC+GGG | - | chr2_3:1782093-1782112 | Msa0270560:five_prime_UTR | 25.0% |
| ! | TTGTTTGATTAACTAATGCT+GGG | + | chr2_3:1782123-1782142 | None:intergenic | 25.0% |
| ! | TTAGTTAATCAAACAAGTGA+AGG | - | chr2_3:1782127-1782146 | Msa0270560:five_prime_UTR | 25.0% |
| ! | TAGTTAATCAAACAAGTGAA+GGG | - | chr2_3:1782128-1782147 | Msa0270560:five_prime_UTR | 25.0% |
| AGAAGAAAGAAACAGAAAGA+GGG | - | chr2_3:1777350-1777369 | Msa0270560:three_prime_UTR | 30.0% | |
| AGTTTCATAAATTGAAGAGG+AGG | + | chr2_3:1777559-1777578 | None:intergenic | 30.0% | |
| CTTGATATACTCACTGAATT+TGG | - | chr2_3:1777946-1777965 | Msa0270560:intron | 30.0% | |
| TCAGTCACATTAATTGAGAA+GGG | + | chr2_3:1778041-1778060 | None:intergenic | 30.0% | |
| ! | TAATTTGTCACTAAGATAGG+GGG | + | chr2_3:1778235-1778254 | None:intergenic | 30.0% |
| ! | GTAATTTGTCACTAAGATAG+GGG | + | chr2_3:1778236-1778255 | None:intergenic | 30.0% |
| ! | CTGTAATTTGTCACTAAGAT+AGG | + | chr2_3:1778238-1778257 | None:intergenic | 30.0% |
| CTATCTTAGTGACAAATTAC+AGG | - | chr2_3:1778236-1778255 | Msa0270560:CDS | 30.0% | |
| ! | TTTTCAACATCCACATCTTT+TGG | - | chr2_3:1778267-1778286 | Msa0270560:CDS | 30.0% |
| AATTCCAAAACCAAAAGATG+TGG | + | chr2_3:1778280-1778299 | None:intergenic | 30.0% | |
| TTTCAAATAAATGTTGGAGG+TGG | + | chr2_3:1778306-1778325 | None:intergenic | 30.0% | |
| AGAAAAAACCACCTCTAAAT+TGG | - | chr2_3:1778363-1778382 | Msa0270560:intron | 30.0% | |
| ATCTGTTATCATCAATCTAG+GGG | + | chr2_3:1778393-1778412 | None:intergenic | 30.0% | |
| CATCTGTTATCATCAATCTA+GGG | + | chr2_3:1778394-1778413 | None:intergenic | 30.0% | |
| TCATCTGTTATCATCAATCT+AGG | + | chr2_3:1778395-1778414 | None:intergenic | 30.0% | |
| !!! | TGCAGTTAGTTTTATTCCTT+AGG | + | chr2_3:1778473-1778492 | None:intergenic | 30.0% |
| AAAAGTAGATATGTCGATCA+GGG | + | chr2_3:1778847-1778866 | None:intergenic | 30.0% | |
| CAGGAAAATTGTGGATATAA+TGG | + | chr2_3:1778912-1778931 | None:intergenic | 30.0% | |
| ATCAGACCTTCTCATTTAAA+AGG | + | chr2_3:1779309-1779328 | None:intergenic | 30.0% | |
| GAATCAAATGATAGCTATTG+GGG | - | chr2_3:1779537-1779556 | Msa0270560:intron | 30.0% | |
| ! | GAATGGTTATCCTTGATTTT+TGG | + | chr2_3:1779656-1779675 | None:intergenic | 30.0% |
| ACCATTCTGTTAATGTTTAG+TGG | - | chr2_3:1779669-1779688 | Msa0270560:intron | 30.0% | |
| AATGGAAGATGAATTCTATC+TGG | - | chr2_3:1779736-1779755 | Msa0270560:intron | 30.0% | |
| ! | CTATCTGGTTGATTAATTTG+TGG | - | chr2_3:1779751-1779770 | Msa0270560:intron | 30.0% |
| TGAACTTTAATAAATGCTGC+TGG | + | chr2_3:1779984-1780003 | None:intergenic | 30.0% | |
| ATCAAACTTCCAAATCAATG+GGG | + | chr2_3:1780044-1780063 | None:intergenic | 30.0% | |
| GATCAAACTTCCAAATCAAT+GGG | + | chr2_3:1780045-1780064 | None:intergenic | 30.0% | |
| AGATCAAACTTCCAAATCAA+TGG | + | chr2_3:1780046-1780065 | None:intergenic | 30.0% | |
| !! | TTATCGTTTTCTCCGTTTTT+TGG | - | chr2_3:1780300-1780319 | Msa0270560:intron | 30.0% |
| CATGTACAAAGACCAAAAAA+CGG | + | chr2_3:1780315-1780334 | None:intergenic | 30.0% | |
| AAAAGATCAGGTCAAGTATA+TGG | + | chr2_3:1780397-1780416 | None:intergenic | 30.0% | |
| TTGTCTTTGCTCTAATTAGA+TGG | - | chr2_3:1780438-1780457 | Msa0270560:CDS | 30.0% | |
| TGTCTTTGCTCTAATTAGAT+GGG | - | chr2_3:1780439-1780458 | Msa0270560:CDS | 30.0% | |
| ! | AATTTTCACGATTTGTAACC+TGG | + | chr2_3:1780558-1780577 | None:intergenic | 30.0% |
| TAGATTGCAATAGTTAAGGT+TGG | + | chr2_3:1780582-1780601 | None:intergenic | 30.0% | |
| ACAAAAAGAAACTGGAGTTT+GGG | + | chr2_3:1780831-1780850 | None:intergenic | 30.0% | |
| AACAAAAAGAAACTGGAGTT+TGG | + | chr2_3:1780832-1780851 | None:intergenic | 30.0% | |
| AAAACGGAACAAAAAGAAAC+TGG | + | chr2_3:1780839-1780858 | None:intergenic | 30.0% | |
| CCGAATCTACAATTAGAAAA+CGG | + | chr2_3:1780855-1780874 | None:intergenic | 30.0% | |
| ! | CCGTTTTCTAATTGTAGATT+CGG | - | chr2_3:1780852-1780871 | Msa0270560:intron | 30.0% |
| ! | CTTTTTGCACTAGTGAAATA+TGG | - | chr2_3:1781032-1781051 | Msa0270560:intron | 30.0% |
| !! | CTAATTTTAAGTGTCATCCT+CGG | - | chr2_3:1781106-1781125 | Msa0270560:intron | 30.0% |
| ATATCCACAATCAATAGAAC+TGG | + | chr2_3:1781403-1781422 | None:intergenic | 30.0% | |
| ! | AAAGATAAGCAGAAGTTTTG+AGG | + | chr2_3:1781488-1781507 | None:intergenic | 30.0% |
| CTCATCAAAAATATAGGTCA+AGG | + | chr2_3:1781666-1781685 | None:intergenic | 30.0% | |
| !! | CTTGACCTATATTTTTGATG+AGG | - | chr2_3:1781664-1781683 | Msa0270560:intron | 30.0% |
| ACTATAGTCCAAGTTTAGAA+AGG | + | chr2_3:1781712-1781731 | None:intergenic | 30.0% | |
| ACAACAAACTACTCCATAAA+TGG | + | chr2_3:1781747-1781766 | None:intergenic | 30.0% | |
| ! | TCTGCATTGATAGTATCTTT+GGG | + | chr2_3:1781779-1781798 | None:intergenic | 30.0% |
| ! | TTCTGCATTGATAGTATCTT+TGG | + | chr2_3:1781780-1781799 | None:intergenic | 30.0% |
| ATACTTGGTTAGATAAGTAG+GGG | - | chr2_3:1781928-1781947 | Msa0270560:CDS | 30.0% | |
| ! | TTGTTGTTGGAGTTATACTA+TGG | - | chr2_3:1781979-1781998 | Msa0270560:CDS | 30.0% |
| CTTGTTTGATTAACTAATGC+TGG | + | chr2_3:1782124-1782143 | None:intergenic | 30.0% | |
| CAGAAGAAAGAAACAGAAAG+AGG | - | chr2_3:1777349-1777368 | Msa0270560:three_prime_UTR | 35.0% | |
| TTCATAAATTGAAGAGGAGG+AGG | + | chr2_3:1777556-1777575 | None:intergenic | 35.0% | |
| GAAACTCAAGTACTCCTTAA+TGG | - | chr2_3:1777573-1777592 | Msa0270560:three_prime_UTR | 35.0% | |
| ATTTGAGCAACATACTGTCT+GGG | + | chr2_3:1777714-1777733 | None:intergenic | 35.0% | |
| AATTTGAGCAACATACTGTC+TGG | + | chr2_3:1777715-1777734 | None:intergenic | 35.0% | |
| TGATTTAGAAGAGAAGCAGT+AGG | + | chr2_3:1777794-1777813 | None:intergenic | 35.0% | |
| CATTAATTGAGAAGGGTAGT+TGG | + | chr2_3:1778034-1778053 | None:intergenic | 35.0% | |
| GTCAGTCACATTAATTGAGA+AGG | + | chr2_3:1778042-1778061 | None:intergenic | 35.0% | |
| CACATGTAGTAAGTACGTAA+CGG | + | chr2_3:1778073-1778092 | None:intergenic | 35.0% | |
| TACACTTGTGTTCAGAATGA+GGG | + | chr2_3:1778152-1778171 | None:intergenic | 35.0% | |
| TTACACTTGTGTTCAGAATG+AGG | + | chr2_3:1778153-1778172 | None:intergenic | 35.0% | |
| TGTAATAGCCCTTCATTGTT+TGG | - | chr2_3:1778168-1778187 | Msa0270560:intron | 35.0% | |
| GTAATAGCCCTTCATTGTTT+GGG | - | chr2_3:1778169-1778188 | Msa0270560:intron | 35.0% | |
| GAGAATTCCCAAACAATGAA+GGG | + | chr2_3:1778179-1778198 | None:intergenic | 35.0% | |
| TGAGAATTCCCAAACAATGA+AGG | + | chr2_3:1778180-1778199 | None:intergenic | 35.0% | |
| ATTGTTTGGGAATTCTCACT+TGG | - | chr2_3:1778182-1778201 | Msa0270560:intron | 35.0% | |
| AATTTGTCACTAAGATAGGG+GGG | + | chr2_3:1778234-1778253 | None:intergenic | 35.0% | |
| !!! | ACATCCACATCTTTTGGTTT+TGG | - | chr2_3:1778273-1778292 | Msa0270560:CDS | 35.0% |
| ! | CTTCTTTTTCTGTAGGAAGT+AGG | - | chr2_3:1778425-1778444 | Msa0270560:intron | 35.0% |
| ATATTCTAGATCTGCACCTA+AGG | - | chr2_3:1778454-1778473 | Msa0270560:intron | 35.0% | |
| !! | TCTTTAACTTGTCAGAACTG+TGG | + | chr2_3:1778689-1778708 | None:intergenic | 35.0% |
| ! | AGATATTTTACATGAAGCCC+GGG | + | chr2_3:1778784-1778803 | None:intergenic | 35.0% |
| ! | GAGATATTTTACATGAAGCC+CGG | + | chr2_3:1778785-1778804 | None:intergenic | 35.0% |
| CAAAAGTAGATATGTCGATC+AGG | + | chr2_3:1778848-1778867 | None:intergenic | 35.0% | |
| ! | ATATCCACAATTTTCCTGCT+TGG | - | chr2_3:1778914-1778933 | Msa0270560:CDS | 35.0% |
| TTAAGCTTACGGGAAAAGTA+AGG | + | chr2_3:1778942-1778961 | None:intergenic | 35.0% | |
| ! | TGATTGTCGTTTATCCATTG+CGG | - | chr2_3:1779035-1779054 | Msa0270560:intron | 35.0% |
| !!! | GTAATTTTAACTCACCGCAA+TGG | + | chr2_3:1779052-1779071 | None:intergenic | 35.0% |
| ! | TGAGGAATCTGAAACAAATG+AGG | + | chr2_3:1779128-1779147 | None:intergenic | 35.0% |
| TTGTTTCAGATTCCTCAGTA+TGG | - | chr2_3:1779131-1779150 | Msa0270560:intron | 35.0% | |
| ! | AGATAATGGCATTAAGCATG+TGG | - | chr2_3:1779373-1779392 | Msa0270560:intron | 35.0% |
| AAATGATAGCTATTGGGGTT+TGG | - | chr2_3:1779542-1779561 | Msa0270560:intron | 35.0% | |
| TCATGTGATCCCAAAAATCA+AGG | - | chr2_3:1779643-1779662 | Msa0270560:intron | 35.0% | |
| GCCACTAAACATTAACAGAA+TGG | + | chr2_3:1779673-1779692 | None:intergenic | 35.0% | |
| !! | TTTCTGGTTCATTTGAAAGG+AGG | - | chr2_3:1780075-1780094 | Msa0270560:CDS | 35.0% |
| AAACGGAGAAAACGATAACA+GGG | + | chr2_3:1780298-1780317 | None:intergenic | 35.0% | |
| AAAACGGAGAAAACGATAAC+AGG | + | chr2_3:1780299-1780318 | None:intergenic | 35.0% | |
| ATGTAGTTCCACTACTTACA+AGG | + | chr2_3:1780486-1780505 | None:intergenic | 35.0% | |
| AACTTGAAGGAAATTGAAGG+TGG | - | chr2_3:1780517-1780536 | Msa0270560:intron | 35.0% | |
| ! | AATTGAAGGTGGAACTGTTT+TGG | - | chr2_3:1780528-1780547 | Msa0270560:intron | 35.0% |
| !! | TTCTTATGGCTTGTTGTATC+TGG | - | chr2_3:1780636-1780655 | Msa0270560:intron | 35.0% |
| ! | CTGACAATTGAACACTTTTC+AGG | - | chr2_3:1780666-1780685 | Msa0270560:intron | 35.0% |
| AAATCGATGATTGGACGAAA+AGG | - | chr2_3:1780709-1780728 | Msa0270560:intron | 35.0% | |
| TCATGAGATGCTTGAAAGAT+TGG | - | chr2_3:1780747-1780766 | Msa0270560:intron | 35.0% | |
| TTTCTAATTGTAGATTCGGC+AGG | - | chr2_3:1780856-1780875 | Msa0270560:intron | 35.0% | |
| ATCCTCCCCTAAAATGAATA+GGG | + | chr2_3:1780992-1781011 | None:intergenic | 35.0% | |
| CGAGGATGACACTTAAAATT+AGG | + | chr2_3:1781108-1781127 | None:intergenic | 35.0% | |
| GAATATTGTTGGGAGTTTGT+GGG | - | chr2_3:1781318-1781337 | Msa0270560:intron | 35.0% | |
| AATATTGTTGGGAGTTTGTG+GGG | - | chr2_3:1781319-1781338 | Msa0270560:intron | 35.0% | |
| ! | GAAACCAGTTCTATTGATTG+TGG | - | chr2_3:1781396-1781415 | Msa0270560:intron | 35.0% |
| AAACTTCTGCTTATCTTTCG+TGG | - | chr2_3:1781490-1781509 | Msa0270560:CDS | 35.0% | |
| ATCATATGAACGTAGTCAAC+AGG | + | chr2_3:1781611-1781630 | None:intergenic | 35.0% | |
| TACGTTCATATGATGCAGAT+TGG | - | chr2_3:1781617-1781636 | Msa0270560:intron | 35.0% | |
| ! | TGCATTGATAGTATCTTTGG+GGG | + | chr2_3:1781777-1781796 | None:intergenic | 35.0% |
| ! | CTGCATTGATAGTATCTTTG+GGG | + | chr2_3:1781778-1781797 | None:intergenic | 35.0% |
| AACGAAATTGCATTTCTTGC+TGG | - | chr2_3:1781817-1781836 | Msa0270560:CDS | 35.0% | |
| TACTTGGTTAGATAAGTAGG+GGG | - | chr2_3:1781929-1781948 | Msa0270560:CDS | 35.0% | |
| GAAATTAGAAATTTGCGGGA+TGG | - | chr2_3:1782097-1782116 | Msa0270560:five_prime_UTR | 35.0% | |
| ! | ACGATGATGATGAGCCAAAT+TGG | - | chr2_3:1777486-1777505 | Msa0270560:three_prime_UTR | 40.0% |
| GAACAGGAGTGAAACCAATT+TGG | + | chr2_3:1777503-1777522 | None:intergenic | 40.0% | |
| ! | CAATTTACTGCTTGCTGAAC+AGG | + | chr2_3:1777519-1777538 | None:intergenic | 40.0% |
| ATAAATTGAAGAGGAGGAGG+AGG | + | chr2_3:1777553-1777572 | None:intergenic | 40.0% | |
| ACAATTGACAGTCCTTGAGA+AGG | + | chr2_3:1777674-1777693 | None:intergenic | 40.0% | |
| GTATGTTGCTCAAATTCCTC+AGG | - | chr2_3:1777719-1777738 | Msa0270560:exon | 40.0% | |
| ! | ATACTTCCAAGTTGGAAAGC+TGG | + | chr2_3:1777858-1777877 | None:intergenic | 40.0% |
| AGCTTTCCAACTTGGAAGTA+TGG | - | chr2_3:1777857-1777876 | Msa0270560:intron | 40.0% | |
| CTGAAACCATACTTCCAAGT+TGG | + | chr2_3:1777866-1777885 | None:intergenic | 40.0% | |
| ! | ACTTGGAAGTATGGTTTCAG+AGG | - | chr2_3:1777866-1777885 | Msa0270560:intron | 40.0% |
| TATCAAGTCCTACGATACCA+AGG | + | chr2_3:1777933-1777952 | None:intergenic | 40.0% | |
| TATACTCACTGAATTTGGCC+AGG | - | chr2_3:1777951-1777970 | Msa0270560:intron | 40.0% | |
| CGTTACGTACTTACTACATG+TGG | - | chr2_3:1778071-1778090 | Msa0270560:intron | 40.0% | |
| TGTGTTCAGAATGAGGGAAT+GGG | + | chr2_3:1778146-1778165 | None:intergenic | 40.0% | |
| TTGTGTTCAGAATGAGGGAA+TGG | + | chr2_3:1778147-1778166 | None:intergenic | 40.0% | |
| ! | GGTATAGTGTCTGAGATGTT+GGG | + | chr2_3:1778212-1778231 | None:intergenic | 40.0% |
| ATTTGTCACTAAGATAGGGG+GGG | + | chr2_3:1778233-1778252 | None:intergenic | 40.0% | |
| !!! | GAGGTGGTTTTTTCTTCATG+TGG | + | chr2_3:1778358-1778377 | None:intergenic | 40.0% |
| TAGTCAACACTTATCAGCCT+CGG | + | chr2_3:1778638-1778657 | None:intergenic | 40.0% | |
| AGCTTGCAAAAATGCCTCAA+TGG | - | chr2_3:1779183-1779202 | Msa0270560:intron | 40.0% | |
| ! | GGCTTTTCTTTTGTCCATTG+AGG | + | chr2_3:1779200-1779219 | None:intergenic | 40.0% |
| TTTCCTTCTTACTGTTCAGC+TGG | - | chr2_3:1779334-1779353 | Msa0270560:intron | 40.0% | |
| TTCCTTCTTACTGTTCAGCT+GGG | - | chr2_3:1779335-1779354 | Msa0270560:intron | 40.0% | |
| CGCGTAAAGCTTATAATCTC+TGG | + | chr2_3:1779906-1779925 | None:intergenic | 40.0% | |
| ATAAATGCTGCTGGTCAACA+TGG | + | chr2_3:1779975-1779994 | None:intergenic | 40.0% | |
| ! | CAATTAGGACCCCATTGATT+TGG | - | chr2_3:1780032-1780051 | Msa0270560:CDS | 40.0% |
| AAGCAGAGTTCAATGGCAAT+AGG | + | chr2_3:1780153-1780172 | None:intergenic | 40.0% | |
| TATCACGAAGCAGAGTTCAA+TGG | + | chr2_3:1780160-1780179 | None:intergenic | 40.0% | |
| ATCTTGGACCTTGTAAGTAG+TGG | - | chr2_3:1780475-1780494 | Msa0270560:intron | 40.0% | |
| ! | TACGAAACTGCTGCTTCTTA+TGG | - | chr2_3:1780622-1780641 | Msa0270560:intron | 40.0% |
| TGAGATGCTTGAAAGATTGG+AGG | - | chr2_3:1780750-1780769 | Msa0270560:intron | 40.0% | |
| AAAGAAACTGGAGTTTGGGA+GGG | + | chr2_3:1780827-1780846 | None:intergenic | 40.0% | |
| AAAAGAAACTGGAGTTTGGG+AGG | + | chr2_3:1780828-1780847 | None:intergenic | 40.0% | |
| ! | TCCCCAACCCTATTCATTTT+AGG | - | chr2_3:1780982-1781001 | Msa0270560:intron | 40.0% |
| CCCTAAAATGAATAGGGTTG+GGG | + | chr2_3:1780986-1781005 | None:intergenic | 40.0% | |
| ! | CCCCAACCCTATTCATTTTA+GGG | - | chr2_3:1780983-1781002 | Msa0270560:intron | 40.0% |
| CCCCTAAAATGAATAGGGTT+GGG | + | chr2_3:1780987-1781006 | None:intergenic | 40.0% | |
| ! | CCCAACCCTATTCATTTTAG+GGG | - | chr2_3:1780984-1781003 | Msa0270560:intron | 40.0% |
| TCCCCTAAAATGAATAGGGT+TGG | + | chr2_3:1780988-1781007 | None:intergenic | 40.0% | |
| !! | AACCCTATTCATTTTAGGGG+AGG | - | chr2_3:1780987-1781006 | Msa0270560:intron | 40.0% |
| GATCCTCCCCTAAAATGAAT+AGG | + | chr2_3:1780993-1781012 | None:intergenic | 40.0% | |
| CTTTGGCACACATATGACTA+TGG | + | chr2_3:1781207-1781226 | None:intergenic | 40.0% | |
| AGTCATATGTGTGCCAAAGA+AGG | - | chr2_3:1781208-1781227 | Msa0270560:intron | 40.0% | |
| GACTTGTACAATGCCTTCTT+TGG | + | chr2_3:1781224-1781243 | None:intergenic | 40.0% | |
| GTCTATACAGCAATTGAGAG+CGG | - | chr2_3:1781241-1781260 | Msa0270560:intron | 40.0% | |
| GGAATATTGTTGGGAGTTTG+TGG | - | chr2_3:1781317-1781336 | Msa0270560:intron | 40.0% | |
| AAAGGACAACAGGAATCACA+CGG | + | chr2_3:1781431-1781450 | None:intergenic | 40.0% | |
| GTTCATATGATGCAGATTGG+AGG | - | chr2_3:1781620-1781639 | Msa0270560:intron | 40.0% | |
| ! | TTGATAGTATCTTTGGGGGT+GGG | + | chr2_3:1781773-1781792 | None:intergenic | 40.0% |
| ! | ATTGATAGTATCTTTGGGGG+TGG | + | chr2_3:1781774-1781793 | None:intergenic | 40.0% |
| AGATATTCCCACTTCTGCAT+CGG | - | chr2_3:1781847-1781866 | Msa0270560:CDS | 40.0% | |
| ATAAGATGACCAGCTCATTG+AGG | + | chr2_3:1782054-1782073 | None:intergenic | 40.0% | |
| CTTTGCTTGGCAAACCAAGA+CGG | + | chr2_3:1777626-1777645 | None:intergenic | 45.0% | |
| !! | TTGGTTTGCCAAGCAAAGGT+CGG | - | chr2_3:1777628-1777647 | Msa0270560:three_prime_UTR | 45.0% |
| GTTGCTCAAATTCCTCAGGT+TGG | - | chr2_3:1777723-1777742 | Msa0270560:exon | 45.0% | |
| TACGTTACGTTACCAACCTG+AGG | + | chr2_3:1777738-1777757 | None:intergenic | 45.0% | |
| TACACTCCAGCTTTCCAACT+TGG | - | chr2_3:1777849-1777868 | Msa0270560:intron | 45.0% | |
| TTATCCGGAGATCTTGACCT+TGG | - | chr2_3:1777913-1777932 | Msa0270560:intron | 45.0% | |
| GATACCAAGGTCAAGATCTC+CGG | + | chr2_3:1777920-1777939 | None:intergenic | 45.0% | |
| GATCTTGACCTTGGTATCGT+AGG | - | chr2_3:1777922-1777941 | Msa0270560:intron | 45.0% | |
| GAATGGGCGCTATGTCTAAT+AGG | + | chr2_3:1778130-1778149 | None:intergenic | 45.0% | |
| ! | GGGTATAGTGTCTGAGATGT+TGG | + | chr2_3:1778213-1778232 | None:intergenic | 45.0% |
| !! | TTCTTTGAAGCACCCATACC+CGG | - | chr2_3:1778763-1778782 | Msa0270560:intron | 45.0% |
| TTTACATGAAGCCCGGGTAT+GGG | + | chr2_3:1778778-1778797 | None:intergenic | 45.0% | |
| ! | TTTTACATGAAGCCCGGGTA+TGG | + | chr2_3:1778779-1778798 | None:intergenic | 45.0% |
| GGTTCCAAGCAGGAAAATTG+TGG | + | chr2_3:1778921-1778940 | None:intergenic | 45.0% | |
| GGAAAAGTAAGGTTCCAAGC+AGG | + | chr2_3:1778931-1778950 | None:intergenic | 45.0% | |
| CGATCTTATCATTGTGCACG+AGG | - | chr2_3:1778999-1779018 | Msa0270560:intron | 45.0% | |
| TATCATTGTGCACGAGGCTT+TGG | - | chr2_3:1779005-1779024 | Msa0270560:intron | 45.0% | |
| AATCCAGTTGCAACTCTCAG+AGG | + | chr2_3:1779221-1779240 | None:intergenic | 45.0% | |
| GATAGCTATTGGGGTTTGGA+AGG | - | chr2_3:1779546-1779565 | Msa0270560:intron | 45.0% | |
| CTGGTTCATTTGAAAGGAGG+AGG | - | chr2_3:1780078-1780097 | Msa0270560:CDS | 45.0% | |
| TTTGTTAGACTATCGAGCCC+AGG | - | chr2_3:1780119-1780138 | Msa0270560:intron | 45.0% | |
| GAACTCTGCTTCGTGATAAC+TGG | - | chr2_3:1780162-1780181 | Msa0270560:intron | 45.0% | |
| CAGCATCAACTAGATGGAGA+TGG | + | chr2_3:1780371-1780390 | None:intergenic | 45.0% | |
| GGGAATTGCTGATGCTATCT+TGG | - | chr2_3:1780459-1780478 | Msa0270560:intron | 45.0% | |
| !!! | TGGAACTGTTTTGGAAAGCC+AGG | - | chr2_3:1780537-1780556 | Msa0270560:intron | 45.0% |
| ! | AAAGATTGGAGGCACATCTG+AGG | - | chr2_3:1780761-1780780 | Msa0270560:intron | 45.0% |
| ! | AAGATTGGAGGCACATCTGA+GGG | - | chr2_3:1780762-1780781 | Msa0270560:intron | 45.0% |
| AAGAAACTGGAGTTTGGGAG+GGG | + | chr2_3:1780826-1780845 | None:intergenic | 45.0% | |
| CAGGTCACTGCAAATATGAG+AGG | - | chr2_3:1780875-1780894 | Msa0270560:intron | 45.0% | |
| ! | AGTACTGAGCCAACCATCAT+TGG | - | chr2_3:1780925-1780944 | Msa0270560:intron | 45.0% |
| CAGAAAACGGGACTTACAGT+GGG | + | chr2_3:1781149-1781168 | None:intergenic | 45.0% | |
| TCCATCACGCTTGCAGAAAA+CGG | + | chr2_3:1781162-1781181 | None:intergenic | 45.0% | |
| ! | TTTCTGCAAGCGTGATGGAA+AGG | - | chr2_3:1781163-1781182 | Msa0270560:intron | 45.0% |
| GTGTGATTCCTGTTGTCCTT+TGG | - | chr2_3:1781430-1781449 | Msa0270560:intron | 45.0% | |
| GAACGTAGTCAACAGGAAAC+TGG | + | chr2_3:1781604-1781623 | None:intergenic | 45.0% | |
| TTGATGAGGAAACTCCCAGA+TGG | - | chr2_3:1781678-1781697 | Msa0270560:intron | 45.0% | |
| GTCCAAGTTTAGAAAGGAGC+TGG | + | chr2_3:1781706-1781725 | None:intergenic | 45.0% | |
| ! | TGATAGTATCTTTGGGGGTG+GGG | + | chr2_3:1781772-1781791 | None:intergenic | 45.0% |
| TTGGTTAGATAAGTAGGGGG+TGG | - | chr2_3:1781932-1781951 | Msa0270560:CDS | 45.0% | |
| TGGTTAGATAAGTAGGGGGT+GGG | - | chr2_3:1781933-1781952 | Msa0270560:CDS | 45.0% | |
| !! | AATTATAAATTATAAAGTAT+AGG | - | chr2_3:1779840-1779859 | Msa0270560:intron | 5.0% |
| AATTGAAGAGGAGGAGGAGG+AGG | + | chr2_3:1777550-1777569 | None:intergenic | 50.0% | |
| CGGAGACTGGGTTTCCATTA+AGG | + | chr2_3:1777590-1777609 | None:intergenic | 50.0% | |
| AAGACGGATCTCTTTCCTGG+CGG | + | chr2_3:1777610-1777629 | None:intergenic | 50.0% | |
| ACCAAGACGGATCTCTTTCC+TGG | + | chr2_3:1777613-1777632 | None:intergenic | 50.0% | |
| !! | CGTCTTGGTTTGCCAAGCAA+AGG | - | chr2_3:1777624-1777643 | Msa0270560:three_prime_UTR | 50.0% |
| GAAGACATCCGACCTTTGCT+TGG | + | chr2_3:1777639-1777658 | None:intergenic | 50.0% | |
| TGACACACTCGACCTTCTCA+AGG | - | chr2_3:1777659-1777678 | Msa0270560:three_prime_UTR | 50.0% | |
| CTAGGGGTCTGCCAATTTAG+AGG | + | chr2_3:1778377-1778396 | None:intergenic | 50.0% | |
| ! | TGTCGCTTCACTTGCCAAGT+TGG | + | chr2_3:1778526-1778545 | None:intergenic | 50.0% |
| !! | TCTTTGAAGCACCCATACCC+GGG | - | chr2_3:1778764-1778783 | Msa0270560:intron | 50.0% |
| ! | AAGCCTCTGAGAGTTGCAAC+TGG | - | chr2_3:1779215-1779234 | Msa0270560:intron | 50.0% |
| GACCCAGCTGAACAGTAAGA+AGG | + | chr2_3:1779340-1779359 | None:intergenic | 50.0% | |
| ! | GTGGCATTTTCGACTGCTGA+TGG | - | chr2_3:1779392-1779411 | Msa0270560:intron | 50.0% |
| CAAAGACTATCTCTCACCGC+AGG | + | chr2_3:1779434-1779453 | None:intergenic | 50.0% | |
| TGGCAGCAGCATCAACTAGA+TGG | + | chr2_3:1780377-1780396 | None:intergenic | 50.0% | |
| GCGAGCAGGAAATCGATGAT+TGG | - | chr2_3:1780700-1780719 | Msa0270560:intron | 50.0% | |
| TATGAGAGGAAGCAGTGCAG+AGG | - | chr2_3:1780889-1780908 | Msa0270560:intron | 50.0% | |
| ! | TGAGCCAACCATCATTGGCT+GGG | - | chr2_3:1780930-1780949 | Msa0270560:intron | 50.0% |
| GTTGCAGGTGTGATGTGTGA+TGG | - | chr2_3:1780952-1780971 | Msa0270560:intron | 50.0% | |
| ATCCTCGGTTGTCTATCTGC+AGG | - | chr2_3:1781121-1781140 | Msa0270560:intron | 50.0% | |
| TCCTCGGTTGTCTATCTGCA+GGG | - | chr2_3:1781122-1781141 | Msa0270560:intron | 50.0% | |
| GCAGAAAACGGGACTTACAG+TGG | + | chr2_3:1781150-1781169 | None:intergenic | 50.0% | |
| CCATCACGCTTGCAGAAAAC+GGG | + | chr2_3:1781161-1781180 | None:intergenic | 50.0% | |
| TCATGCTTGTCGCACACCAA+AGG | + | chr2_3:1781449-1781468 | None:intergenic | 50.0% | |
| ATGATGCAGATTGGAGGCAG+CGG | - | chr2_3:1781626-1781645 | Msa0270560:intron | 50.0% | |
| CGCCAGCTCCTTTCTAAACT+TGG | - | chr2_3:1781701-1781720 | Msa0270560:intron | 50.0% | |
| CTACAAGCCGATGCAGAAGT+GGG | + | chr2_3:1781857-1781876 | None:intergenic | 50.0% | |
| TTAGATAAGTAGGGGGTGGG+AGG | - | chr2_3:1781936-1781955 | Msa0270560:CDS | 50.0% | |
| TTCCACCTACCTCAATGAGC+TGG | - | chr2_3:1782042-1782061 | Msa0270560:exon | 50.0% | |
| GATGACCAGCTCATTGAGGT+AGG | + | chr2_3:1782050-1782069 | None:intergenic | 50.0% | |
| TCTCTTTCCTGGCGGAGACT+GGG | + | chr2_3:1777602-1777621 | None:intergenic | 55.0% | |
| ATCTCTTTCCTGGCGGAGAC+TGG | + | chr2_3:1777603-1777622 | None:intergenic | 55.0% | |
| GCCAGGAAAGAGATCCGTCT+TGG | - | chr2_3:1777609-1777628 | Msa0270560:three_prime_UTR | 55.0% | |
| ! | GTTTTGCAGACACGCTGACC+TGG | + | chr2_3:1777972-1777991 | None:intergenic | 55.0% |
| GGGGTCTGCCAATTTAGAGG+TGG | + | chr2_3:1778374-1778393 | None:intergenic | 55.0% | |
| TTCACTGACAACTCCTGCCG+AGG | - | chr2_3:1778618-1778637 | Msa0270560:intron | 55.0% | |
| CAACACTTATCAGCCTCGGC+AGG | + | chr2_3:1778634-1778653 | None:intergenic | 55.0% | |
| !! | GTGCACGAGGCTTTGGAGTA+TGG | - | chr2_3:1779012-1779031 | Msa0270560:intron | 55.0% |
| TTCGACTGCTGATGGAGCAC+TGG | - | chr2_3:1779400-1779419 | Msa0270560:intron | 55.0% | |
| AGGAAGCAGTGCAGAGGAAG+TGG | - | chr2_3:1780895-1780914 | Msa0270560:intron | 55.0% | |
| CTGAGCCAACCATCATTGGC+TGG | - | chr2_3:1780929-1780948 | Msa0270560:intron | 55.0% | |
| GCAACCCAGCCAATGATGGT+TGG | + | chr2_3:1780937-1780956 | None:intergenic | 55.0% | |
| ! | ACCATCATTGGCTGGGTTGC+AGG | - | chr2_3:1780937-1780956 | Msa0270560:intron | 55.0% |
| ACCTGCAACCCAGCCAATGA+TGG | + | chr2_3:1780941-1780960 | None:intergenic | 55.0% | |
| TCCCTGCAGATAGACAACCG+AGG | + | chr2_3:1781126-1781145 | None:intergenic | 55.0% | |
| ! | CCCGTTTTCTGCAAGCGTGA+TGG | - | chr2_3:1781158-1781177 | Msa0270560:intron | 55.0% |
| GTCGCACACCAAAGGACAAC+AGG | + | chr2_3:1781441-1781460 | None:intergenic | 55.0% | |
| CCTACAAGCCGATGCAGAAG+TGG | + | chr2_3:1781858-1781877 | None:intergenic | 55.0% | |
| !! | CCACTTCTGCATCGGCTTGT+AGG | - | chr2_3:1781855-1781874 | Msa0270560:CDS | 55.0% |
| GACCAGCTCATTGAGGTAGG+TGG | + | chr2_3:1782047-1782066 | None:intergenic | 55.0% | |
| CATCATCGTCGTCGTCGTCG+CGG | + | chr2_3:1777475-1777494 | None:intergenic | 60.0% | |
| ATGGAAACCCAGTCTCCGCC+AGG | - | chr2_3:1777592-1777611 | Msa0270560:three_prime_UTR | 60.0% | |
| !! | GACTGCTGATGGAGCACTGG+AGG | - | chr2_3:1779403-1779422 | Msa0270560:intron | 60.0% |
| ACTATCGAGCCCAGGTCTCG+AGG | - | chr2_3:1780127-1780146 | Msa0270560:intron | 60.0% | |
| GGCAATAGGCCTCGAGACCT+GGG | + | chr2_3:1780139-1780158 | None:intergenic | 60.0% | |
| TGGCAATAGGCCTCGAGACC+TGG | + | chr2_3:1780140-1780159 | None:intergenic | 60.0% | |
| AGGCTGCTCTTGTTGCGAGC+AGG | - | chr2_3:1780686-1780705 | Msa0270560:intron | 60.0% | |
| GAGGCACATCTGAGGGCGAT+GGG | - | chr2_3:1780769-1780788 | Msa0270560:intron | 60.0% | |
| AGGCACATCTGAGGGCGATG+GGG | - | chr2_3:1780770-1780789 | Msa0270560:intron | 60.0% | |
| GAAAGGAGCTGGCGCCATCT+GGG | + | chr2_3:1781695-1781714 | None:intergenic | 60.0% | |
| AGAAAGGAGCTGGCGCCATC+TGG | + | chr2_3:1781696-1781715 | None:intergenic | 60.0% | |
| ! | AGCACTGGAGGCAGCTCCTG+CGG | - | chr2_3:1779415-1779434 | Msa0270560:intron | 65.0% |
| ! | GGAGGCACATCTGAGGGCGA+TGG | - | chr2_3:1780768-1780787 | Msa0270560:intron | 65.0% |
| GAGGGCGATGGGGCAGTTCA+CGG | - | chr2_3:1780780-1780799 | Msa0270560:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1777295 | 1782163 | 1777295 | ID=Msa0270560;Name=Msa0270560 |
| chr2_3 | mRNA | 1777295 | 1782163 | 1777295 | ID=Msa0270560-mRNA-1;Parent=Msa0270560;Name=Msa0270560-mRNA-1;_AED=0.10;_eAED=0.10;_QI=116|1|1|1|0.88|0.8|10|433|404 |
| chr2_3 | exon | 1777295 | 1777823 | 1777295 | ID=Msa0270560-mRNA-1:exon:815;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1778196 | 1778315 | 1778196 | ID=Msa0270560-mRNA-1:exon:814;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1778500 | 1778580 | 1778500 | ID=Msa0270560-mRNA-1:exon:813;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1778657 | 1778770 | 1778657 | ID=Msa0270560-mRNA-1:exon:812;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1778900 | 1779001 | 1778900 | ID=Msa0270560-mRNA-1:exon:811;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1780022 | 1780105 | 1780022 | ID=Msa0270560-mRNA-1:exon:810;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1780211 | 1780318 | 1780211 | ID=Msa0270560-mRNA-1:exon:809;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1780402 | 1780467 | 1780402 | ID=Msa0270560-mRNA-1:exon:808;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1781486 | 1781599 | 1781486 | ID=Msa0270560-mRNA-1:exon:807;Parent=Msa0270560-mRNA-1 |
| chr2_3 | exon | 1781718 | 1782163 | 1781718 | ID=Msa0270560-mRNA-1:exon:806;Parent=Msa0270560-mRNA-1 |
| chr2_3 | five_prime_UTR | 1782048 | 1782163 | 1782048 | ID=Msa0270560-mRNA-1:five_prime_utr;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1781718 | 1782047 | 1781718 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1781486 | 1781599 | 1781486 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1780402 | 1780467 | 1780402 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1780211 | 1780318 | 1780211 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1780022 | 1780105 | 1780022 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1778900 | 1779001 | 1778900 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1778657 | 1778770 | 1778657 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1778500 | 1778580 | 1778500 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1778196 | 1778315 | 1778196 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | CDS | 1777728 | 1777823 | 1777728 | ID=Msa0270560-mRNA-1:cds;Parent=Msa0270560-mRNA-1 |
| chr2_3 | three_prime_UTR | 1777295 | 1777727 | 1777295 | ID=Msa0270560-mRNA-1:three_prime_utr;Parent=Msa0270560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
