Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188430 | XP_003610300.1 | 91.777 | 377 | 25 | 2 | 27 | 403 | 3 | 373 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188430 | sp|Q8GSJ1|HIS1B_ARATH | 78.919 | 370 | 68 | 2 | 38 | 403 | 50 | 413 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188430 | G7JFL4 | 91.777 | 377 | 25 | 2 | 27 | 403 | 3 | 373 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059960 | Msa0188430 | -0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa0073820 | Msa0188430 | 0.829467 | 5.064703e-55 | -8.615850e-47 |
| Msa0091550 | Msa0188430 | 0.844704 | 6.411244e-59 | -8.615850e-47 |
| Msa0092660 | Msa0188430 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa0092730 | Msa0188430 | 0.812270 | 4.612325e-51 | -8.615850e-47 |
| Msa0094700 | Msa0188430 | 0.825806 | 3.834963e-54 | -8.615850e-47 |
| Msa0137600 | Msa0188430 | 0.813420 | 2.582643e-51 | -8.615850e-47 |
| Msa0171780 | Msa0188430 | 0.824466 | 7.951283e-54 | -8.615850e-47 |
| Msa0171930 | Msa0188430 | 0.824543 | 7.627018e-54 | -8.615850e-47 |
| Msa0188430 | Msa0223390 | 0.804265 | 2.346642e-49 | -8.615850e-47 |
| Msa0188430 | Msa0231040 | 0.811958 | 5.395510e-51 | -8.615850e-47 |
| Msa0188430 | Msa0236330 | 0.802697 | 4.960861e-49 | -8.615850e-47 |
| Msa0188430 | Msa0247310 | 0.815603 | 8.492715e-52 | -8.615850e-47 |
| Msa0188430 | Msa0258380 | 0.822980 | 1.772165e-53 | -8.615850e-47 |
| Msa0188430 | Msa0270560 | 0.880163 | 6.884127e-70 | -8.615850e-47 |
| Msa0188430 | Msa0302660 | 0.800154 | 1.646269e-48 | -8.615850e-47 |
| Msa0188430 | Msa0308990 | 0.863615 | 2.194299e-64 | -8.615850e-47 |
| Msa0188430 | Msa0311260 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0188430 | Msa0323990 | 0.810807 | 9.593260e-51 | -8.615850e-47 |
| Msa0188430 | Msa0327900 | 0.802580 | 5.245064e-49 | -8.615850e-47 |
| Msa0188430 | Msa0367370 | 0.846962 | 1.562334e-59 | -8.615850e-47 |
| Msa0188430 | Msa0370890 | 0.814094 | 1.834804e-51 | -8.615850e-47 |
| Msa0188430 | Msa0374070 | 0.816467 | 5.448230e-52 | -8.615850e-47 |
| Msa0188430 | Msa0379450 | 0.801023 | 1.094630e-48 | -8.615850e-47 |
| Msa0188430 | Msa0396970 | 0.805380 | 1.373086e-49 | -8.615850e-47 |
| Msa0188430 | Msa0398990 | 0.804223 | 2.394283e-49 | -8.615850e-47 |
| Msa0188430 | Msa0423250 | 0.820697 | 5.979956e-53 | -8.615850e-47 |
| Msa0188430 | Msa0427090 | 0.822369 | 2.457992e-53 | -8.615850e-47 |
| Msa0188430 | Msa0446480 | 0.803963 | 2.712007e-49 | -8.615850e-47 |
| Msa0188430 | Msa0458110 | 0.808175 | 3.524079e-50 | -8.615850e-47 |
| Msa0188430 | Msa0469390 | 0.815207 | 1.040269e-51 | -8.615850e-47 |
| Msa0188430 | Msa0473490 | 0.804136 | 2.497260e-49 | -8.615850e-47 |
| Msa0188430 | Msa0480150 | 0.805579 | 1.246837e-49 | -8.615850e-47 |
| Msa0188430 | Msa0486200 | 0.818161 | 2.264817e-52 | -8.615850e-47 |
| Msa0188430 | Msa0515090 | 0.833359 | 5.581309e-56 | -8.615850e-47 |
| Msa0188430 | Msa0555940 | 0.809893 | 1.511012e-50 | -8.615850e-47 |
| Msa0188430 | Msa0567290 | 0.806905 | 6.555791e-50 | -8.615850e-47 |
| Msa0188430 | Msa0589290 | 0.811992 | 5.304093e-51 | -8.615850e-47 |
| Msa0188430 | Msa0647750 | 0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0188430 | Msa0683650 | 0.814056 | 1.871382e-51 | -8.615850e-47 |
| Msa0188430 | Msa0689400 | 0.814322 | 1.634078e-51 | -8.615850e-47 |
| Msa0188430 | Msa0703760 | 0.821371 | 4.184240e-53 | -8.615850e-47 |
| Msa0188430 | Msa0764020 | 0.818571 | 1.828243e-52 | -8.615850e-47 |
| Msa0188430 | Msa0770430 | 0.813048 | 3.118165e-51 | -8.615850e-47 |
| Msa0188430 | Msa0790830 | 0.804636 | 1.964645e-49 | -8.615850e-47 |
| Msa0188430 | Msa0805940 | 0.815182 | 1.053760e-51 | -8.615850e-47 |
| Msa0188430 | Msa0808420 | 0.802015 | 6.853961e-49 | -8.615850e-47 |
| Msa0188430 | Msa0830120 | 0.802539 | 5.348635e-49 | -8.615850e-47 |
| Msa0188430 | Msa0830450 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
| Msa0188430 | Msa0843690 | 0.810220 | 1.284506e-50 | -8.615850e-47 |
| Msa0188430 | Msa0855020 | 0.822180 | 2.719353e-53 | -8.615850e-47 |
| Msa0188430 | Msa0946650 | 0.804945 | 1.692976e-49 | -8.615850e-47 |
| Msa0188430 | Msa0968010 | 0.812071 | 5.097168e-51 | -8.615850e-47 |
| Msa0188430 | Msa0981740 | 0.802879 | 4.549583e-49 | -8.615850e-47 |
| Msa0188430 | Msa1011240 | 0.819885 | 9.181315e-53 | -8.615850e-47 |
| Msa0188430 | Msa1021220 | 0.802734 | 4.874957e-49 | -8.615850e-47 |
| Msa0188430 | Msa1032140 | 0.801112 | 1.050130e-48 | -8.615850e-47 |
| Msa0188430 | Msa1061180 | 0.801847 | 7.420923e-49 | -8.615850e-47 |
| Msa0188430 | Msa1067430 | 0.829830 | 4.133429e-55 | -8.615850e-47 |
| Msa0188430 | Msa1080460 | 0.804451 | 2.146815e-49 | -8.615850e-47 |
| Msa0188430 | Msa1080620 | 0.814479 | 1.508602e-51 | -8.615850e-47 |
| Msa0188430 | Msa1080690 | 0.820938 | 5.264017e-53 | -8.615850e-47 |
| Msa0188430 | Msa1084490 | 0.807823 | 4.186778e-50 | -8.615850e-47 |
| Msa0188430 | Msa1087500 | 0.804142 | 2.489489e-49 | -8.615850e-47 |
| Msa0188430 | Msa1105290 | 0.820430 | 6.888655e-53 | -8.615850e-47 |
| Msa0188430 | Msa1106560 | 0.811800 | 5.841026e-51 | -8.615850e-47 |
| Msa0188430 | Msa1129720 | 0.824968 | 6.052556e-54 | -8.615850e-47 |
| Msa0188430 | Msa1149760 | 0.817980 | 2.488463e-52 | -8.615850e-47 |
| Msa0188430 | Msa1173020 | 0.800163 | 1.639296e-48 | -8.615850e-47 |
| Msa0188430 | Msa1186210 | 0.807320 | 5.354474e-50 | -8.615850e-47 |
| Msa0188430 | Msa1194330 | 0.803224 | 3.859894e-49 | -8.615850e-47 |
| Msa0188430 | Msa1198870 | 0.801667 | 8.081317e-49 | -8.615850e-47 |
| Msa0188430 | Msa1207280 | 0.812695 | 3.724802e-51 | -8.615850e-47 |
| Msa0188430 | Msa1226360 | 0.810282 | 1.245806e-50 | -8.615850e-47 |
| Msa0188430 | Msa1234960 | 0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0188430 | Msa1254210 | 0.833777 | 4.387679e-56 | -8.615850e-47 |
| Msa0188430 | Msa1261340 | 0.803810 | 2.917918e-49 | -8.615850e-47 |
| Msa0188430 | Msa1261370 | 0.809147 | 2.184588e-50 | -8.615850e-47 |
| Msa0188430 | Msa1271510 | 0.806242 | 9.047052e-50 | -8.615850e-47 |
| Msa0188430 | Msa1274740 | 0.815075 | 1.113038e-51 | -8.615850e-47 |
| Msa0188430 | Msa1293060 | 0.803670 | 3.121086e-49 | -8.615850e-47 |
| Msa0188430 | Msa1302150 | 0.804534 | 2.062421e-49 | -8.615850e-47 |
| Msa0188430 | Msa1309360 | 0.803402 | 3.546449e-49 | -8.615850e-47 |
| Msa0188430 | Msa1312730 | 0.822269 | 2.593270e-53 | -8.615850e-47 |
| Msa0188430 | Msa1318180 | 0.813604 | 2.352981e-51 | -8.615850e-47 |
| Msa0188430 | Msa1344430 | 0.803565 | 3.281660e-49 | -8.615850e-47 |
| Msa0188430 | Msa1354040 | 0.800664 | 1.295975e-48 | -8.615850e-47 |
| Msa0188430 | Msa1368730 | 0.809026 | 2.318797e-50 | -8.615850e-47 |
| Msa0188430 | Msa1374810 | 0.805605 | 1.231505e-49 | -8.615850e-47 |
| Msa0188430 | Msa1375400 | 0.800836 | 1.195681e-48 | -8.615850e-47 |
| Msa0188430 | Msa1379980 | 0.804454 | 2.143572e-49 | -8.615850e-47 |
| Msa0188430 | Msa1385900 | 0.807246 | 5.552360e-50 | -8.615850e-47 |
| Msa0188430 | Msa1407710 | 0.808099 | 3.658024e-50 | -8.615850e-47 |
| Msa0188430 | Msa1408770 | 0.820758 | 5.790868e-53 | -8.615850e-47 |
| Msa0188430 | Msa1412520 | 0.805909 | 1.062859e-49 | -8.615850e-47 |
| Msa0188430 | Msa1415250 | 0.834404 | 3.056571e-56 | -8.615850e-47 |
| Msa0188430 | Msa1422900 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0188430 | Msa1424240 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0188430 | Msa1429390 | 0.803581 | 3.255339e-49 | -8.615850e-47 |
| Msa0188430 | Msa1451840 | 0.808317 | 3.286866e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188430 | MtrunA17_Chr4g0073831 | 91.777 | 377 | 25 | 2 | 27 | 403 | 3 | 373 | 0.0 | 706 |
| Msa0188430 | MtrunA17_Chr2g0277331 | 81.995 | 411 | 24 | 6 | 27 | 403 | 5 | 399 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188430 | AT1G09795.1 | 78.919 | 370 | 68 | 2 | 38 | 403 | 50 | 413 | 0.0 | 611 |
| Msa0188430 | AT1G58080.1 | 82.196 | 337 | 60 | 0 | 67 | 403 | 75 | 411 | 0.0 | 592 |
Find 124 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATATATGTGTTCCATTTA+TGG | 0.114201 | 2_1:+3629757 | Msa0188430:three_prime_UTR |
| ACTTATCTAACCAAGTATTT+TGG | 0.169951 | 2_1:-3629949 | None:intergenic |
| CCATTATCTTTCATAAATTT+AGG | 0.178616 | 2_1:-3627373 | None:intergenic |
| TTCTGCATTGATAGTATCTT+TGG | 0.181524 | 2_1:-3629803 | None:intergenic |
| CATTCAGATAGTAGTATTAT+TGG | 0.193401 | 2_1:+3625421 | Msa0188430:CDS |
| CTTGATATACTCACTGAATT+TGG | 0.209989 | 2_1:+3625911 | Msa0188430:CDS |
| ATCTCTTTCCTGGCGGAGAC+TGG | 0.219395 | 2_1:-3625572 | None:intergenic |
| ACAACAAACTACTCCATAAA+TGG | 0.220482 | 2_1:-3629770 | None:intergenic |
| GAAACTCAAGTACTCCTTAA+TGG | 0.221771 | 2_1:+3625545 | Msa0188430:CDS |
| CGGAGACTGGGTTTCCATTA+AGG | 0.239700 | 2_1:-3625559 | None:intergenic |
| ACCATCATTGGCTGGGTTGC+AGG | 0.240929 | 2_1:+3628949 | Msa0188430:CDS |
| AATTGAAGGTGGAACTGTTT+TGG | 0.258121 | 2_1:+3628540 | Msa0188430:CDS |
| AGCTTTCCAACTTGGAAGTA+TGG | 0.273300 | 2_1:+3625822 | Msa0188430:intron |
| GACTTGTACAATGCCTTCTT+TGG | 0.281592 | 2_1:-3629233 | None:intergenic |
| CCACTTCTGCATCGGCTTGT+AGG | 0.290273 | 2_1:+3629881 | Msa0188430:three_prime_UTR |
| ACGACGATGATGAGCCAAAT+TGG | 0.293571 | 2_1:+3625461 | Msa0188430:CDS |
| TCTGCATTGATAGTATCTTT+GGG | 0.295957 | 2_1:-3629802 | None:intergenic |
| AACGAAATTGCATTTCTTGC+TGG | 0.297884 | 2_1:+3629843 | Msa0188430:three_prime_UTR |
| CGCCAGCTCCTTTCTAAACT+TGG | 0.303940 | 2_1:+3629727 | Msa0188430:CDS |
| CCTAAATTTATGAAAGATAA+TGG | 0.318633 | 2_1:+3627373 | Msa0188430:CDS |
| AGAAAGGAGCTGGCGCCATC+TGG | 0.330813 | 2_1:-3629719 | None:intergenic |
| CAATTTACTGCTTGCAGAAC+AGG | 0.332484 | 2_1:-3625491 | None:intergenic |
| CTTTGGCACACATATGACTA+TGG | 0.334395 | 2_1:-3629216 | None:intergenic |
| TTGTTTCAGATTCCTCAGTA+TGG | 0.337830 | 2_1:+3627145 | Msa0188430:intron |
| CTTGTTTGATTAACTAATGC+TGG | 0.342865 | 2_1:-3630147 | None:intergenic |
| GTGCACGAGGCTTTGGAGTA+TGG | 0.349565 | 2_1:+3627026 | Msa0188430:CDS |
| ACCAAGACGGATCTCTTTCC+TGG | 0.352781 | 2_1:-3625582 | None:intergenic |
| TATCATTGTGCACGAGGCTT+TGG | 0.356493 | 2_1:+3627019 | Msa0188430:CDS |
| GAACAGGAGTGAAACCAATT+TGG | 0.367172 | 2_1:-3625475 | None:intergenic |
| TTTAACTTCAACATTGTTGT+TGG | 0.383014 | 2_1:+3629992 | Msa0188430:three_prime_UTR |
| TCATGAGATGCTTGAAAGAT+TGG | 0.385558 | 2_1:+3628759 | Msa0188430:CDS |
| TCCATCACGCTTGCAGAAAA+CGG | 0.387763 | 2_1:-3629171 | None:intergenic |
| GGGAATTGCTGATGCTATCT+TGG | 0.397741 | 2_1:+3628471 | Msa0188430:CDS |
| TTCATAAATTGAAGAGGAGG+AGG | 0.403307 | 2_1:-3625525 | None:intergenic |
| CCATCACGCTTGCAGAAAAC+GGG | 0.416870 | 2_1:-3629170 | None:intergenic |
| ATTGAAAGAAAATAACTTGA+AGG | 0.424383 | 2_1:+3628516 | Msa0188430:CDS |
| ATGTGAAATTAGAAATTTGC+GGG | 0.426209 | 2_1:+3630119 | Msa0188430:three_prime_UTR |
| GAGGCACATCTGAGGGCGAT+GGG | 0.428682 | 2_1:+3628781 | Msa0188430:CDS |
| AAATACTTGGTTAGATAAGT+AGG | 0.429147 | 2_1:+3629952 | Msa0188430:three_prime_UTR |
| TTAATTCTGTCCAAAATACT+TGG | 0.433178 | 2_1:+3629939 | Msa0188430:three_prime_UTR |
| TTGTTGTTGGAGTTATACTA+TGG | 0.447465 | 2_1:+3630005 | Msa0188430:three_prime_UTR |
| ATTGTAAGAAAATTGTTATC+CGG | 0.447935 | 2_1:+3625863 | Msa0188430:CDS |
| GGAGGCACATCTGAGGGCGA+TGG | 0.453025 | 2_1:+3628780 | Msa0188430:CDS |
| TCTCTTTCCTGGCGGAGACT+GGG | 0.457663 | 2_1:-3625571 | None:intergenic |
| AGGCTGCTCTTGTTGCGAGC+AGG | 0.461210 | 2_1:+3628698 | Msa0188430:intron |
| AATTTGAGCAACATACTGTC+TGG | 0.464852 | 2_1:-3625684 | None:intergenic |
| AGTACTGAGCCAACCATCAT+TGG | 0.465847 | 2_1:+3628937 | Msa0188430:CDS |
| AGGAAGCAGTGCAGAGGAAG+TGG | 0.466330 | 2_1:+3628907 | Msa0188430:CDS |
| GAGGGCGATGGGGCAGTTCA+CGG | 0.466433 | 2_1:+3628792 | Msa0188430:CDS |
| TACACTCCAGCTTTCCAACT+TGG | 0.467279 | 2_1:+3625814 | Msa0188430:intron |
| AAGCCTCTGAGAGTTGCAAC+TGG | 0.474293 | 2_1:+3627229 | Msa0188430:CDS |
| CTGAGCCAACCATCATTGGC+TGG | 0.475399 | 2_1:+3628941 | Msa0188430:CDS |
| AATACTTGGTTAGATAAGTA+GGG | 0.476344 | 2_1:+3629953 | Msa0188430:three_prime_UTR |
| CTGCATTGATAGTATCTTTG+GGG | 0.479892 | 2_1:-3629801 | None:intergenic |
| ATGTAGTTCCACTACTTACA+AGG | 0.491288 | 2_1:-3628495 | None:intergenic |
| AGTCATATGTGTGCCAAAGA+AGG | 0.500447 | 2_1:+3629220 | Msa0188430:CDS |
| AAATCGATGATTGGACGAAA+AGG | 0.502489 | 2_1:+3628721 | Msa0188430:CDS |
| CTGAAACCATACTTCCAAGT+TGG | 0.505934 | 2_1:-3625828 | None:intergenic |
| TTGTTTGATTAACTAATGCT+GGG | 0.508108 | 2_1:-3630146 | None:intergenic |
| GATACCAAGGTCAAGATCTC+CGG | 0.510734 | 2_1:-3625882 | None:intergenic |
| GAAGACATCCGACCTTTGCT+TGG | 0.511677 | 2_1:-3625608 | None:intergenic |
| TTCGACTGCTGATGGAGCAC+TGG | 0.513957 | 2_1:+3627414 | Msa0188430:CDS |
| ACTATAGTCCAAGTTTAGAA+AGG | 0.521278 | 2_1:-3629735 | None:intergenic |
| GTCCAAGTTTAGAAAGGAGC+TGG | 0.532328 | 2_1:-3629729 | None:intergenic |
| TTAGTTAATCAAACAAGTGA+AGG | 0.533555 | 2_1:+3630153 | Msa0188430:three_prime_UTR |
| ATGGAAACCCAGTCTCCGCC+AGG | 0.536174 | 2_1:+3625564 | Msa0188430:CDS |
| GCGAGCAGGAAATCGATGAT+TGG | 0.536182 | 2_1:+3628712 | Msa0188430:CDS |
| GTATGTTGCTCAAATTCCTC+AGG | 0.536649 | 2_1:+3625691 | Msa0188430:CDS |
| GAAAGGAGCTGGCGCCATCT+GGG | 0.539669 | 2_1:-3629718 | None:intergenic |
| GCCAGGAAAGAGATCCGTCT+TGG | 0.542357 | 2_1:+3625581 | Msa0188430:CDS |
| ACCTGCAACCCAGCCAATGA+TGG | 0.542827 | 2_1:-3628950 | None:intergenic |
| TTATCCGGAGATCTTGACCT+TGG | 0.545845 | 2_1:+3625878 | Msa0188430:CDS |
| AATAACTTGAAGGAAATTGA+AGG | 0.546732 | 2_1:+3628526 | Msa0188430:CDS |
| CGTCTTGGTTTGCCAAGCAA+AGG | 0.547016 | 2_1:+3625596 | Msa0188430:CDS |
| TGAGATGCTTGAAAGATTGG+AGG | 0.547977 | 2_1:+3628762 | Msa0188430:CDS |
| CCTACAAGCCGATGCAGAAG+TGG | 0.550151 | 2_1:-3629881 | None:intergenic |
| TATACTCACTGAATTTGGCC+AGG | 0.550883 | 2_1:+3625916 | Msa0188430:CDS |
| ATTTGAGCAACATACTGTCT+GGG | 0.552782 | 2_1:-3625683 | None:intergenic |
| ATCTTGGACCTTGTAAGTAG+TGG | 0.552901 | 2_1:+3628487 | Msa0188430:CDS |
| AGCACTGGAGGCAGCTCCTG+CGG | 0.560029 | 2_1:+3627429 | Msa0188430:CDS |
| TTGAGTTTCATAAATTGAAG+AGG | 0.563607 | 2_1:-3625531 | None:intergenic |
| TGACACACTCGACCTTCTCA+AGG | 0.565584 | 2_1:+3625631 | Msa0188430:CDS |
| AGTTTCATAAATTGAAGAGG+AGG | 0.570962 | 2_1:-3625528 | None:intergenic |
| GACTGCTGATGGAGCACTGG+AGG | 0.576762 | 2_1:+3627417 | Msa0188430:CDS |
| AGATATTCCCACTTCTGCAT+CGG | 0.578518 | 2_1:+3629873 | Msa0188430:three_prime_UTR |
| TTTCTGCAAGCGTGATGGAA+AGG | 0.581353 | 2_1:+3629175 | Msa0188430:CDS |
| TTCCACCTACCTCAATGAGC+TGG | 0.583516 | 2_1:+3630068 | Msa0188430:three_prime_UTR |
| TGAAAATGTAAATTCACTAG+AGG | 0.584392 | 2_1:+3627174 | Msa0188430:CDS |
| ATAAATTGAAGAGGAGGAGG+AGG | 0.585140 | 2_1:-3625522 | None:intergenic |
| GATCTTGACCTTGGTATCGT+AGG | 0.585932 | 2_1:+3625887 | Msa0188430:CDS |
| GTTCATATGATGCAGATTGG+AGG | 0.586050 | 2_1:+3629646 | Msa0188430:intron |
| CGATCTTATCATTGTGCACG+AGG | 0.586126 | 2_1:+3627013 | Msa0188430:CDS |
| AAAGATTGGAGGCACATCTG+AGG | 0.586441 | 2_1:+3628773 | Msa0188430:CDS |
| AAGATTGGAGGCACATCTGA+GGG | 0.587964 | 2_1:+3628774 | Msa0188430:CDS |
| TGAGCCAACCATCATTGGCT+GGG | 0.591014 | 2_1:+3628942 | Msa0188430:CDS |
| GAAATTAGAAATTTGCGGGA+TGG | 0.591843 | 2_1:+3630123 | Msa0188430:three_prime_UTR |
| TGCATTGATAGTATCTTTGG+GGG | 0.595193 | 2_1:-3629800 | None:intergenic |
| ACTTGGAAGTATGGTTTCAG+AGG | 0.598140 | 2_1:+3625831 | Msa0188430:CDS |
| CATGTGAAATTAGAAATTTG+CGG | 0.601685 | 2_1:+3630118 | Msa0188430:three_prime_UTR |
| GCAACCCAGCCAATGATGGT+TGG | 0.605047 | 2_1:-3628946 | None:intergenic |
| ATGATGCAGATTGGAGGCAG+CGG | 0.611608 | 2_1:+3629652 | Msa0188430:intron |
| TTGGTTTGCCAAGCAAAGGT+CGG | 0.612452 | 2_1:+3625600 | Msa0188430:CDS |
| GCAGAAAACGGGACTTACAG+TGG | 0.618700 | 2_1:-3629159 | None:intergenic |
| GATGACCAGCTCATTGAGGT+AGG | 0.621980 | 2_1:-3630073 | None:intergenic |
| CTTTGCTTGGCAAACCAAGA+CGG | 0.625476 | 2_1:-3625595 | None:intergenic |
| AATCCAGTTGCAACTCTCAG+AGG | 0.625497 | 2_1:-3627232 | None:intergenic |
| TATGAGAGGAAGCAGTGCAG+AGG | 0.626577 | 2_1:+3628901 | Msa0188430:CDS |
| AGATAATGGCATTAAGCATG+TGG | 0.627844 | 2_1:+3627387 | Msa0188430:CDS |
| TTGATGAGGAAACTCCCAGA+TGG | 0.630461 | 2_1:+3629704 | Msa0188430:CDS |
| AGGCACATCTGAGGGCGATG+GGG | 0.631283 | 2_1:+3628782 | Msa0188430:CDS |
| GACCAGCTCATTGAGGTAGG+TGG | 0.635644 | 2_1:-3630070 | None:intergenic |
| TAGTTAATCAAACAAGTGAA+GGG | 0.635773 | 2_1:+3630154 | Msa0188430:three_prime_UTR |
| GTCTATACAGCAATTGAGAG+CGG | 0.638210 | 2_1:+3629253 | Msa0188430:CDS |
| CAGGTCACTGCAAATATGAG+AGG | 0.643908 | 2_1:+3628887 | Msa0188430:intron |
| CTACAAGCCGATGCAGAAGT+GGG | 0.646815 | 2_1:-3629880 | None:intergenic |
| ATACTTGGTTAGATAAGTAG+GGG | 0.647347 | 2_1:+3629954 | Msa0188430:three_prime_UTR |
| ATAAGATGACCAGCTCATTG+AGG | 0.648580 | 2_1:-3630077 | None:intergenic |
| AACTTGAAGGAAATTGAAGG+TGG | 0.649831 | 2_1:+3628529 | Msa0188430:CDS |
| TGATTGTCGTTTATCCATTG+CGG | 0.655142 | 2_1:+3627049 | Msa0188430:CDS |
| CAGAAAACGGGACTTACAGT+GGG | 0.660083 | 2_1:-3629158 | None:intergenic |
| ACAATTGACAGTCCTTGAGA+AGG | 0.663029 | 2_1:-3625643 | None:intergenic |
| TATCAAGTCCTACGATACCA+AGG | 0.676300 | 2_1:-3625895 | None:intergenic |
| TACTTGGTTAGATAAGTAGG+GGG | 0.711440 | 2_1:+3629955 | Msa0188430:three_prime_UTR |
| AAGACGGATCTCTTTCCTGG+CGG | 0.740099 | 2_1:-3625579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTAATGTAATTATTTTA+AGG | + | chr2_1:3625997-3626016 | Msa0188430:intron | 10.0% |
| !! | ATGTTAATTATACTAAATAT+AGG | - | chr2_1:3626606-3626625 | None:intergenic | 10.0% |
| !!! | GTTTAACTTTTAAATTTTGT+TGG | - | chr2_1:3626575-3626594 | None:intergenic | 15.0% |
| !! | TTAGTATAATTAACATGAAT+TGG | + | chr2_1:3626610-3626629 | Msa0188430:intron | 15.0% |
| !!! | TTTAAAATCTGAAAACATAA+AGG | - | chr2_1:3627488-3627507 | None:intergenic | 15.0% |
| !! | CAAAATTTATCAAAAACTAT+AGG | - | chr2_1:3627595-3627614 | None:intergenic | 15.0% |
| !! | ATTGTTTAAGTAAAACAATT+AGG | + | chr2_1:3628031-3628050 | Msa0188430:intron | 15.0% |
| !! | TTGATCTAATTATAAATTTC+TGG | + | chr2_1:3628073-3628092 | Msa0188430:intron | 15.0% |
| !! | AAAAATGACATGTGATAAAT+GGG | - | chr2_1:3625377-3625396 | None:intergenic | 20.0% |
| !!! | AATTTTCTTACAATGTCTTT+GGG | - | chr2_1:3625857-3625876 | None:intergenic | 20.0% |
| !! | ATTGTAAGAAAATTGTTATC+CGG | + | chr2_1:3625863-3625882 | Msa0188430:CDS | 20.0% |
| !! | ACATTACATACATAAGTAAA+AGG | - | chr2_1:3625987-3626006 | None:intergenic | 20.0% |
| !! | TAAAACATAATGTAAATTGC+TGG | - | chr2_1:3626047-3626066 | None:intergenic | 20.0% |
| !! | AATCATACAAAATTACTGTT+TGG | + | chr2_1:3626130-3626149 | Msa0188430:intron | 20.0% |
| !!! | TTTTTTTCTTCTTTTTCTGT+AGG | + | chr2_1:3626435-3626454 | Msa0188430:intron | 20.0% |
| !! | CATAAAAAAAGTTAAGCTTA+CGG | - | chr2_1:3626967-3626986 | None:intergenic | 20.0% |
| !! | CCATTATCTTTCATAAATTT+AGG | - | chr2_1:3627376-3627395 | None:intergenic | 20.0% |
| !! | CCTAAATTTATGAAAGATAA+TGG | + | chr2_1:3627373-3627392 | Msa0188430:CDS | 20.0% |
| !!! | AGATTATTTTCACATTTCAT+AGG | + | chr2_1:3627713-3627732 | Msa0188430:intron | 20.0% |
| !!! | TCAAATAAGAAAGTATAGAT+TGG | - | chr2_1:3627954-3627973 | None:intergenic | 20.0% |
| !!! | TCTATACTTTCTTATTTGAA+AGG | + | chr2_1:3627955-3627974 | Msa0188430:intron | 20.0% |
| !!! | CTATACTTTCTTATTTGAAA+GGG | + | chr2_1:3627956-3627975 | Msa0188430:intron | 20.0% |
| !!! | GAAATATTTTATATGGAAAG+AGG | - | chr2_1:3628288-3628307 | None:intergenic | 20.0% |
| !!! | TAACAGGGAAATATTTTATA+TGG | - | chr2_1:3628295-3628314 | None:intergenic | 20.0% |
| !! | AAAATGAATCAAAAAAGATC+AGG | - | chr2_1:3628421-3628440 | None:intergenic | 20.0% |
| !! | ATTGAAAGAAAATAACTTGA+AGG | + | chr2_1:3628516-3628535 | Msa0188430:CDS | 20.0% |
| !!! | TATTTTTCTTGTTCTTAAGT+TGG | - | chr2_1:3629357-3629376 | None:intergenic | 20.0% |
| !! | ACAAGAAAAATAGAAAAGTA+AGG | + | chr2_1:3629365-3629384 | Msa0188430:intron | 20.0% |
| !! | TTATATATGTGTTCCATTTA+TGG | + | chr2_1:3629757-3629776 | Msa0188430:three_prime_UTR | 20.0% |
| ! | GAAAAATGACATGTGATAAA+TGG | - | chr2_1:3625378-3625397 | None:intergenic | 25.0% |
| ! | CATTCAGATAGTAGTATTAT+TGG | + | chr2_1:3625421-3625440 | Msa0188430:CDS | 25.0% |
| ! | TTGAGTTTCATAAATTGAAG+AGG | - | chr2_1:3625534-3625553 | None:intergenic | 25.0% |
| !! | CAATTTTCTTACAATGTCTT+TGG | - | chr2_1:3625858-3625877 | None:intergenic | 25.0% |
| !! | TGTAATTTGTCACTAAGATA+GGG | - | chr2_1:3626275-3626294 | None:intergenic | 25.0% |
| !!! | AAGTTGGTATAACGTTTAAT+AGG | - | chr2_1:3626527-3626546 | None:intergenic | 25.0% |
| ! | TATTAAACGTTATACCAACT+TGG | + | chr2_1:3626526-3626545 | Msa0188430:intron | 25.0% |
| !! | ATCTTGAAGCATTTCTAATT+AGG | - | chr2_1:3626749-3626768 | None:intergenic | 25.0% |
| ! | TGCATGTGTTAAAATTTAAC+AGG | + | chr2_1:3626822-3626841 | Msa0188430:intron | 25.0% |
| ! | TATGTTTATCATTCTTTGTC+AGG | + | chr2_1:3626983-3627002 | Msa0188430:intron | 25.0% |
| ! | ATGTTTATCATTCTTTGTCA+GGG | + | chr2_1:3626984-3627003 | Msa0188430:intron | 25.0% |
| ! | CAAAAAACAATGATACTGAT+AGG | - | chr2_1:3627101-3627120 | None:intergenic | 25.0% |
| !! | TTTTCAAATATTCCATACTG+AGG | - | chr2_1:3627160-3627179 | None:intergenic | 25.0% |
| ! | TGAAAATGTAAATTCACTAG+AGG | + | chr2_1:3627174-3627193 | Msa0188430:CDS | 25.0% |
| ! | TTAGTTGAATGTGAATACAT+AGG | - | chr2_1:3627260-3627279 | None:intergenic | 25.0% |
| !! | TGTTTACCTTTTAAATGAGA+AGG | + | chr2_1:3627314-3627333 | Msa0188430:intron | 25.0% |
| ! | TTGAATCAAATGATAGCTAT+TGG | + | chr2_1:3627549-3627568 | Msa0188430:intron | 25.0% |
| ! | TGAATCAAATGATAGCTATT+GGG | + | chr2_1:3627550-3627569 | Msa0188430:intron | 25.0% |
| ! | ATAGCTTAATACACTAATCA+TGG | + | chr2_1:3627625-3627644 | Msa0188430:intron | 25.0% |
| !! | AATGGTTATCCTTGATTTTT+GGG | - | chr2_1:3627669-3627688 | None:intergenic | 25.0% |
| ! | TAGGATGAAAAACTGTAAAA+CGG | + | chr2_1:3627732-3627751 | Msa0188430:intron | 25.0% |
| ! | TAGTCAATATTCTGTATTCA+AGG | + | chr2_1:3627804-3627823 | Msa0188430:intron | 25.0% |
| !!! | AAATTTCTGGTTCATTTGAA+AGG | + | chr2_1:3628086-3628105 | Msa0188430:intron | 25.0% |
| ! | AATAACTTGAAGGAAATTGA+AGG | + | chr2_1:3628526-3628545 | Msa0188430:CDS | 25.0% |
| ! | GCAAAAAGAAAATACAGAAA+AGG | - | chr2_1:3629032-3629051 | None:intergenic | 25.0% |
| !!! | AGTTTGAGTTTTCTATCAAA+AGG | + | chr2_1:3629306-3629325 | Msa0188430:intron | 25.0% |
| !!! | GTTTGAGTTTTCTATCAAAA+GGG | + | chr2_1:3629307-3629326 | Msa0188430:intron | 25.0% |
| !!! | TTTGAGTTTTCTATCAAAAG+GGG | + | chr2_1:3629308-3629327 | Msa0188430:intron | 25.0% |
| ! | AATAGAAAAGTAAGGTTGAA+TGG | + | chr2_1:3629373-3629392 | Msa0188430:intron | 25.0% |
| ! | ATAGAAAAGTAAGGTTGAAT+GGG | + | chr2_1:3629374-3629393 | Msa0188430:intron | 25.0% |
| ! | TCATCAAAAATATAGGTCAA+GGG | - | chr2_1:3629691-3629710 | None:intergenic | 25.0% |
| ! | AGTTTCCTCATCAAAAATAT+AGG | - | chr2_1:3629698-3629717 | None:intergenic | 25.0% |
| ! | TTAATTCTGTCCAAAATACT+TGG | + | chr2_1:3629939-3629958 | Msa0188430:three_prime_UTR | 25.0% |
| !! | ACTTATCTAACCAAGTATTT+TGG | - | chr2_1:3629952-3629971 | None:intergenic | 25.0% |
| ! | AAATACTTGGTTAGATAAGT+AGG | + | chr2_1:3629952-3629971 | Msa0188430:three_prime_UTR | 25.0% |
| ! | AATACTTGGTTAGATAAGTA+GGG | + | chr2_1:3629953-3629972 | Msa0188430:three_prime_UTR | 25.0% |
| !! | TTTAACTTCAACATTGTTGT+TGG | + | chr2_1:3629992-3630011 | Msa0188430:three_prime_UTR | 25.0% |
| ! | CATGTGAAATTAGAAATTTG+CGG | + | chr2_1:3630118-3630137 | Msa0188430:three_prime_UTR | 25.0% |
| ! | ATGTGAAATTAGAAATTTGC+GGG | + | chr2_1:3630119-3630138 | Msa0188430:three_prime_UTR | 25.0% |
| ! | TTGTTTGATTAACTAATGCT+GGG | - | chr2_1:3630149-3630168 | None:intergenic | 25.0% |
| ! | TTAGTTAATCAAACAAGTGA+AGG | + | chr2_1:3630153-3630172 | Msa0188430:three_prime_UTR | 25.0% |
| ! | TAGTTAATCAAACAAGTGAA+GGG | + | chr2_1:3630154-3630173 | Msa0188430:three_prime_UTR | 25.0% |
| AGTTTCATAAATTGAAGAGG+AGG | - | chr2_1:3625531-3625550 | None:intergenic | 30.0% | |
| CTTGATATACTCACTGAATT+TGG | + | chr2_1:3625911-3625930 | Msa0188430:CDS | 30.0% | |
| ATAATGTAAATTGCTGGAAG+TGG | - | chr2_1:3626041-3626060 | None:intergenic | 30.0% | |
| TCAGTCACATTAATTGAGAA+GGG | - | chr2_1:3626079-3626098 | None:intergenic | 30.0% | |
| ! | TAATTTGTCACTAAGATAGG+GGG | - | chr2_1:3626273-3626292 | None:intergenic | 30.0% |
| ! | GTAATTTGTCACTAAGATAG+GGG | - | chr2_1:3626274-3626293 | None:intergenic | 30.0% |
| ! | CTGTAATTTGTCACTAAGAT+AGG | - | chr2_1:3626276-3626295 | None:intergenic | 30.0% |
| CTATCTTAGTGACAAATTAC+AGG | + | chr2_1:3626274-3626293 | Msa0188430:intron | 30.0% | |
| ! | TTTTCAACATCCACAACTTT+TGG | + | chr2_1:3626305-3626324 | Msa0188430:intron | 30.0% |
| AATTCCAAAACCAAAAGTTG+TGG | - | chr2_1:3626318-3626337 | None:intergenic | 30.0% | |
| AGAAAAAACCACCTCTAAAT+TGG | + | chr2_1:3626380-3626399 | Msa0188430:intron | 30.0% | |
| ATCTGTTATCATCAATCTAG+GGG | - | chr2_1:3626410-3626429 | None:intergenic | 30.0% | |
| CATCTGTTATCATCAATCTA+GGG | - | chr2_1:3626411-3626430 | None:intergenic | 30.0% | |
| TCATCTGTTATCATCAATCT+AGG | - | chr2_1:3626412-3626431 | None:intergenic | 30.0% | |
| !!! | TGCAGTTAGTTTTATTCCTT+AGG | - | chr2_1:3626490-3626509 | None:intergenic | 30.0% |
| AAAAGTAGATATGTCGATCA+GGG | - | chr2_1:3626864-3626883 | None:intergenic | 30.0% | |
| CAGGAAAATTGTGGATATAA+TGG | - | chr2_1:3626927-3626946 | None:intergenic | 30.0% | |
| ATCAGACCTTCTCATTTAAA+AGG | - | chr2_1:3627323-3627342 | None:intergenic | 30.0% | |
| GAATCAAATGATAGCTATTG+GGG | + | chr2_1:3627551-3627570 | Msa0188430:intron | 30.0% | |
| ! | GAATGGTTATCCTTGATTTT+TGG | - | chr2_1:3627670-3627689 | None:intergenic | 30.0% |
| ACCATTCTGTTAATGTTTAG+TGG | + | chr2_1:3627683-3627702 | Msa0188430:intron | 30.0% | |
| ! | CTATCTGGTTGATTAATTTG+TGG | + | chr2_1:3627765-3627784 | Msa0188430:intron | 30.0% |
| TGAACTTTAATAAATGCTGC+TGG | - | chr2_1:3627998-3628017 | None:intergenic | 30.0% | |
| ATCAAACTTCCAAATCAATG+GGG | - | chr2_1:3628058-3628077 | None:intergenic | 30.0% | |
| GATCAAACTTCCAAATCAAT+GGG | - | chr2_1:3628059-3628078 | None:intergenic | 30.0% | |
| AGATCAAACTTCCAAATCAA+TGG | - | chr2_1:3628060-3628079 | None:intergenic | 30.0% | |
| !! | TTATCGTTTTCTCCGTTTTT+TGG | + | chr2_1:3628312-3628331 | Msa0188430:intron | 30.0% |
| CATGTACAAAGACCAAAAAA+CGG | - | chr2_1:3628327-3628346 | None:intergenic | 30.0% | |
| AAAAGATCAGGTCAAGTATA+TGG | - | chr2_1:3628409-3628428 | None:intergenic | 30.0% | |
| TTGTCTTTGCTCTAATTAGA+TGG | + | chr2_1:3628450-3628469 | Msa0188430:intron | 30.0% | |
| TGTCTTTGCTCTAATTAGAT+GGG | + | chr2_1:3628451-3628470 | Msa0188430:intron | 30.0% | |
| ! | AATTTTCACGATTTGTAACC+TGG | - | chr2_1:3628570-3628589 | None:intergenic | 30.0% |
| ACAATAGATCGCAATAGTTA+AGG | - | chr2_1:3628598-3628617 | None:intergenic | 30.0% | |
| ACAAAAAGAAACTGGAGTTT+GGG | - | chr2_1:3628843-3628862 | None:intergenic | 30.0% | |
| AACAAAAAGAAACTGGAGTT+TGG | - | chr2_1:3628844-3628863 | None:intergenic | 30.0% | |
| AAAACGGAACAAAAAGAAAC+TGG | - | chr2_1:3628851-3628870 | None:intergenic | 30.0% | |
| CCGAATCTACAATTAGAAAA+CGG | - | chr2_1:3628867-3628886 | None:intergenic | 30.0% | |
| ! | CCGTTTTCTAATTGTAGATT+CGG | + | chr2_1:3628864-3628883 | Msa0188430:intron | 30.0% |
| ! | CTTTTTGCACTAGTGAAATA+TGG | + | chr2_1:3629044-3629063 | Msa0188430:intron | 30.0% |
| !! | CTAATTTTAAGTGTCATCCT+CGG | + | chr2_1:3629118-3629137 | Msa0188430:intron | 30.0% |
| TATCAAAAGGGGAATATTGT+TGG | + | chr2_1:3629319-3629338 | Msa0188430:intron | 30.0% | |
| ATCAAAAGGGGAATATTGTT+GGG | + | chr2_1:3629320-3629339 | Msa0188430:intron | 30.0% | |
| ATATCCACAATCAATAGAAC+TGG | - | chr2_1:3629415-3629434 | None:intergenic | 30.0% | |
| ! | AAAGATAAGCAGAAGTTTTG+AGG | - | chr2_1:3629514-3629533 | None:intergenic | 30.0% |
| CTCATCAAAAATATAGGTCA+AGG | - | chr2_1:3629692-3629711 | None:intergenic | 30.0% | |
| !! | CTTGACCTATATTTTTGATG+AGG | + | chr2_1:3629690-3629709 | Msa0188430:CDS | 30.0% |
| ACTATAGTCCAAGTTTAGAA+AGG | - | chr2_1:3629738-3629757 | None:intergenic | 30.0% | |
| ACAACAAACTACTCCATAAA+TGG | - | chr2_1:3629773-3629792 | None:intergenic | 30.0% | |
| ! | TCTGCATTGATAGTATCTTT+GGG | - | chr2_1:3629805-3629824 | None:intergenic | 30.0% |
| ! | TTCTGCATTGATAGTATCTT+TGG | - | chr2_1:3629806-3629825 | None:intergenic | 30.0% |
| ATACTTGGTTAGATAAGTAG+GGG | + | chr2_1:3629954-3629973 | Msa0188430:three_prime_UTR | 30.0% | |
| ! | TTGTTGTTGGAGTTATACTA+TGG | + | chr2_1:3630005-3630024 | Msa0188430:three_prime_UTR | 30.0% |
| CTTGTTTGATTAACTAATGC+TGG | - | chr2_1:3630150-3630169 | None:intergenic | 30.0% | |
| TTCATAAATTGAAGAGGAGG+AGG | - | chr2_1:3625528-3625547 | None:intergenic | 35.0% | |
| GAAACTCAAGTACTCCTTAA+TGG | + | chr2_1:3625545-3625564 | Msa0188430:CDS | 35.0% | |
| ATTTGAGCAACATACTGTCT+GGG | - | chr2_1:3625686-3625705 | None:intergenic | 35.0% | |
| AATTTGAGCAACATACTGTC+TGG | - | chr2_1:3625687-3625706 | None:intergenic | 35.0% | |
| TGATTTAGAAGAGAAGCAGT+AGG | - | chr2_1:3625766-3625785 | None:intergenic | 35.0% | |
| CATTAATTGAGAAGGGTAGT+TGG | - | chr2_1:3626072-3626091 | None:intergenic | 35.0% | |
| GTCAGTCACATTAATTGAGA+AGG | - | chr2_1:3626080-3626099 | None:intergenic | 35.0% | |
| TTACCACATGTAGTACGTAA+CGG | - | chr2_1:3626111-3626130 | None:intergenic | 35.0% | |
| TACACTTGTGTTCAGAATGA+GGG | - | chr2_1:3626190-3626209 | None:intergenic | 35.0% | |
| TTACACTTGTGTTCAGAATG+AGG | - | chr2_1:3626191-3626210 | None:intergenic | 35.0% | |
| TGTAATAGCCCTTCATTGTT+TGG | + | chr2_1:3626206-3626225 | Msa0188430:intron | 35.0% | |
| GTAATAGCCCTTCATTGTTT+GGG | + | chr2_1:3626207-3626226 | Msa0188430:intron | 35.0% | |
| GAGAATTCCCAAACAATGAA+GGG | - | chr2_1:3626217-3626236 | None:intergenic | 35.0% | |
| TGAGAATTCCCAAACAATGA+AGG | - | chr2_1:3626218-3626237 | None:intergenic | 35.0% | |
| ATTGTTTGGGAATTCTCACT+TGG | + | chr2_1:3626220-3626239 | Msa0188430:intron | 35.0% | |
| AATTTGTCACTAAGATAGGG+GGG | - | chr2_1:3626272-3626291 | None:intergenic | 35.0% | |
| !!! | ACATCCACAACTTTTGGTTT+TGG | + | chr2_1:3626311-3626330 | Msa0188430:intron | 35.0% |
| ! | CTTCTTTTTCTGTAGGAAGT+AGG | + | chr2_1:3626442-3626461 | Msa0188430:intron | 35.0% |
| ATATTCTAGATCTGCACCTA+AGG | + | chr2_1:3626471-3626490 | Msa0188430:intron | 35.0% | |
| !! | TCTTTAACTTGTCAGAACTG+TGG | - | chr2_1:3626706-3626725 | None:intergenic | 35.0% |
| ! | AGATATTTTACATGAAGCCC+GGG | - | chr2_1:3626801-3626820 | None:intergenic | 35.0% |
| ! | GAGATATTTTACATGAAGCC+CGG | - | chr2_1:3626802-3626821 | None:intergenic | 35.0% |
| CAAAAGTAGATATGTCGATC+AGG | - | chr2_1:3626865-3626884 | None:intergenic | 35.0% | |
| ! | ATATCCACAATTTTCCTGCT+TGG | + | chr2_1:3626929-3626948 | Msa0188430:intron | 35.0% |
| GTTAAGCTTACGGAAAAGTA+AGG | - | chr2_1:3626957-3626976 | None:intergenic | 35.0% | |
| ! | TGATTGTCGTTTATCCATTG+CGG | + | chr2_1:3627049-3627068 | Msa0188430:CDS | 35.0% |
| !!! | GTAATTTTAACTCACCGCAA+TGG | - | chr2_1:3627066-3627085 | None:intergenic | 35.0% |
| ! | TGAGGAATCTGAAACAAATG+AGG | - | chr2_1:3627142-3627161 | None:intergenic | 35.0% |
| TTGTTTCAGATTCCTCAGTA+TGG | + | chr2_1:3627145-3627164 | Msa0188430:intron | 35.0% | |
| ! | AGATAATGGCATTAAGCATG+TGG | + | chr2_1:3627387-3627406 | Msa0188430:CDS | 35.0% |
| AAATGATAGCTATTGGGGTT+TGG | + | chr2_1:3627556-3627575 | Msa0188430:intron | 35.0% | |
| TCATGTGATCCCAAAAATCA+AGG | + | chr2_1:3627657-3627676 | Msa0188430:intron | 35.0% | |
| GCCACTAAACATTAACAGAA+TGG | - | chr2_1:3627687-3627706 | None:intergenic | 35.0% | |
| AACGGAAGATGAATTCTATC+TGG | + | chr2_1:3627750-3627769 | Msa0188430:intron | 35.0% | |
| !! | TTTCTGGTTCATTTGAAAGG+AGG | + | chr2_1:3628089-3628108 | Msa0188430:intron | 35.0% |
| AAACGGAGAAAACGATAACA+GGG | - | chr2_1:3628310-3628329 | None:intergenic | 35.0% | |
| AAAACGGAGAAAACGATAAC+AGG | - | chr2_1:3628311-3628330 | None:intergenic | 35.0% | |
| ATGTAGTTCCACTACTTACA+AGG | - | chr2_1:3628498-3628517 | None:intergenic | 35.0% | |
| AACTTGAAGGAAATTGAAGG+TGG | + | chr2_1:3628529-3628548 | Msa0188430:CDS | 35.0% | |
| ! | AATTGAAGGTGGAACTGTTT+TGG | + | chr2_1:3628540-3628559 | Msa0188430:CDS | 35.0% |
| TAGATCGCAATAGTTAAGGT+CGG | - | chr2_1:3628594-3628613 | None:intergenic | 35.0% | |
| !! | TTCTTATGGCTTGTTGTATC+TGG | + | chr2_1:3628648-3628667 | Msa0188430:intron | 35.0% |
| ! | CTGACAATTGAACACTTTTC+AGG | + | chr2_1:3628678-3628697 | Msa0188430:intron | 35.0% |
| AAATCGATGATTGGACGAAA+AGG | + | chr2_1:3628721-3628740 | Msa0188430:CDS | 35.0% | |
| TCATGAGATGCTTGAAAGAT+TGG | + | chr2_1:3628759-3628778 | Msa0188430:CDS | 35.0% | |
| TTTCTAATTGTAGATTCGGC+AGG | + | chr2_1:3628868-3628887 | Msa0188430:intron | 35.0% | |
| ATCCTCCCCTAAAATGAATA+GGG | - | chr2_1:3629004-3629023 | None:intergenic | 35.0% | |
| CGAGGATGACACTTAAAATT+AGG | - | chr2_1:3629120-3629139 | None:intergenic | 35.0% | |
| GAATATTGTTGGGAGTTTGT+GGG | + | chr2_1:3629330-3629349 | Msa0188430:intron | 35.0% | |
| AATATTGTTGGGAGTTTGTG+GGG | + | chr2_1:3629331-3629350 | Msa0188430:intron | 35.0% | |
| ! | GAAACCAGTTCTATTGATTG+TGG | + | chr2_1:3629408-3629427 | Msa0188430:intron | 35.0% |
| AAACTTCTGCTTATCTTTCG+TGG | + | chr2_1:3629516-3629535 | Msa0188430:intron | 35.0% | |
| ATCATATGAACGTAGTCAAC+AGG | - | chr2_1:3629637-3629656 | None:intergenic | 35.0% | |
| TACGTTCATATGATGCAGAT+TGG | + | chr2_1:3629643-3629662 | Msa0188430:intron | 35.0% | |
| ! | TGCATTGATAGTATCTTTGG+GGG | - | chr2_1:3629803-3629822 | None:intergenic | 35.0% |
| ! | CTGCATTGATAGTATCTTTG+GGG | - | chr2_1:3629804-3629823 | None:intergenic | 35.0% |
| AACGAAATTGCATTTCTTGC+TGG | + | chr2_1:3629843-3629862 | Msa0188430:three_prime_UTR | 35.0% | |
| TACTTGGTTAGATAAGTAGG+GGG | + | chr2_1:3629955-3629974 | Msa0188430:three_prime_UTR | 35.0% | |
| GAAATTAGAAATTTGCGGGA+TGG | + | chr2_1:3630123-3630142 | Msa0188430:three_prime_UTR | 35.0% | |
| GAACAGGAGTGAAACCAATT+TGG | - | chr2_1:3625478-3625497 | None:intergenic | 40.0% | |
| CAATTTACTGCTTGCAGAAC+AGG | - | chr2_1:3625494-3625513 | None:intergenic | 40.0% | |
| ATAAATTGAAGAGGAGGAGG+AGG | - | chr2_1:3625525-3625544 | None:intergenic | 40.0% | |
| ACAATTGACAGTCCTTGAGA+AGG | - | chr2_1:3625646-3625665 | None:intergenic | 40.0% | |
| GTATGTTGCTCAAATTCCTC+AGG | + | chr2_1:3625691-3625710 | Msa0188430:CDS | 40.0% | |
| ! | ATACTTCCAAGTTGGAAAGC+TGG | - | chr2_1:3625823-3625842 | None:intergenic | 40.0% |
| AGCTTTCCAACTTGGAAGTA+TGG | + | chr2_1:3625822-3625841 | Msa0188430:intron | 40.0% | |
| CTGAAACCATACTTCCAAGT+TGG | - | chr2_1:3625831-3625850 | None:intergenic | 40.0% | |
| ! | ACTTGGAAGTATGGTTTCAG+AGG | + | chr2_1:3625831-3625850 | Msa0188430:CDS | 40.0% |
| TATCAAGTCCTACGATACCA+AGG | - | chr2_1:3625898-3625917 | None:intergenic | 40.0% | |
| TATACTCACTGAATTTGGCC+AGG | + | chr2_1:3625916-3625935 | Msa0188430:CDS | 40.0% | |
| TGTAAATTGCTGGAAGTGGA+AGG | - | chr2_1:3626037-3626056 | None:intergenic | 40.0% | |
| ! | GGTATAGTGTCTGAGATGTT+GGG | - | chr2_1:3626250-3626269 | None:intergenic | 40.0% |
| ATTTGTCACTAAGATAGGGG+GGG | - | chr2_1:3626271-3626290 | None:intergenic | 40.0% | |
| !!! | GAGGTGGTTTTTTCTTCATG+TGG | - | chr2_1:3626375-3626394 | None:intergenic | 40.0% |
| TAGTCAACACTTATCAGCCT+CGG | - | chr2_1:3626655-3626674 | None:intergenic | 40.0% | |
| AGCTTGCAAAAATGCCTCAA+TGG | + | chr2_1:3627197-3627216 | Msa0188430:CDS | 40.0% | |
| ! | GGCTTTTCTTTTGTCCATTG+AGG | - | chr2_1:3627214-3627233 | None:intergenic | 40.0% |
| TTTCCTTCTTACTGTTCAGC+TGG | + | chr2_1:3627348-3627367 | Msa0188430:intron | 40.0% | |
| TTCCTTCTTACTGTTCAGCT+GGG | + | chr2_1:3627349-3627368 | Msa0188430:intron | 40.0% | |
| CGCGTAAAGCTTATAATCTC+TGG | - | chr2_1:3627920-3627939 | None:intergenic | 40.0% | |
| ATAAATGCTGCTGGTCAACA+TGG | - | chr2_1:3627989-3628008 | None:intergenic | 40.0% | |
| ! | CAATTAGGACCCCATTGATT+TGG | + | chr2_1:3628046-3628065 | Msa0188430:intron | 40.0% |
| AAGCAGAGTTCAATGGCAAT+AGG | - | chr2_1:3628167-3628186 | None:intergenic | 40.0% | |
| TATCACGAAGCAGAGTTCAA+TGG | - | chr2_1:3628174-3628193 | None:intergenic | 40.0% | |
| ATCTTGGACCTTGTAAGTAG+TGG | + | chr2_1:3628487-3628506 | Msa0188430:CDS | 40.0% | |
| ! | TACGAAACTGCTGCTTCTTA+TGG | + | chr2_1:3628634-3628653 | Msa0188430:intron | 40.0% |
| TGAGATGCTTGAAAGATTGG+AGG | + | chr2_1:3628762-3628781 | Msa0188430:CDS | 40.0% | |
| AAAGAAACTGGAGTTTGGGA+GGG | - | chr2_1:3628839-3628858 | None:intergenic | 40.0% | |
| AAAAGAAACTGGAGTTTGGG+AGG | - | chr2_1:3628840-3628859 | None:intergenic | 40.0% | |
| ! | TCCCCAACCCTATTCATTTT+AGG | + | chr2_1:3628994-3629013 | Msa0188430:intron | 40.0% |
| CCCTAAAATGAATAGGGTTG+GGG | - | chr2_1:3628998-3629017 | None:intergenic | 40.0% | |
| ! | CCCCAACCCTATTCATTTTA+GGG | + | chr2_1:3628995-3629014 | Msa0188430:intron | 40.0% |
| CCCCTAAAATGAATAGGGTT+GGG | - | chr2_1:3628999-3629018 | None:intergenic | 40.0% | |
| ! | CCCAACCCTATTCATTTTAG+GGG | + | chr2_1:3628996-3629015 | Msa0188430:intron | 40.0% |
| TCCCCTAAAATGAATAGGGT+TGG | - | chr2_1:3629000-3629019 | None:intergenic | 40.0% | |
| !! | AACCCTATTCATTTTAGGGG+AGG | + | chr2_1:3628999-3629018 | Msa0188430:intron | 40.0% |
| GATCCTCCCCTAAAATGAAT+AGG | - | chr2_1:3629005-3629024 | None:intergenic | 40.0% | |
| CTTTGGCACACATATGACTA+TGG | - | chr2_1:3629219-3629238 | None:intergenic | 40.0% | |
| AGTCATATGTGTGCCAAAGA+AGG | + | chr2_1:3629220-3629239 | Msa0188430:CDS | 40.0% | |
| GACTTGTACAATGCCTTCTT+TGG | - | chr2_1:3629236-3629255 | None:intergenic | 40.0% | |
| GTCTATACAGCAATTGAGAG+CGG | + | chr2_1:3629253-3629272 | Msa0188430:CDS | 40.0% | |
| GGAATATTGTTGGGAGTTTG+TGG | + | chr2_1:3629329-3629348 | Msa0188430:intron | 40.0% | |
| AAAGGACAACAGGAATCACA+CGG | - | chr2_1:3629443-3629462 | None:intergenic | 40.0% | |
| GTTCATATGATGCAGATTGG+AGG | + | chr2_1:3629646-3629665 | Msa0188430:intron | 40.0% | |
| ! | TTGATAGTATCTTTGGGGGT+GGG | - | chr2_1:3629799-3629818 | None:intergenic | 40.0% |
| ! | ATTGATAGTATCTTTGGGGG+TGG | - | chr2_1:3629800-3629819 | None:intergenic | 40.0% |
| AGATATTCCCACTTCTGCAT+CGG | + | chr2_1:3629873-3629892 | Msa0188430:three_prime_UTR | 40.0% | |
| ATAAGATGACCAGCTCATTG+AGG | - | chr2_1:3630080-3630099 | None:intergenic | 40.0% | |
| ACGACGATGATGAGCCAAAT+TGG | + | chr2_1:3625461-3625480 | Msa0188430:CDS | 45.0% | |
| CTTTGCTTGGCAAACCAAGA+CGG | - | chr2_1:3625598-3625617 | None:intergenic | 45.0% | |
| !! | TTGGTTTGCCAAGCAAAGGT+CGG | + | chr2_1:3625600-3625619 | Msa0188430:CDS | 45.0% |
| GTTGCTCAAATTCCTCAGGT+AGG | + | chr2_1:3625695-3625714 | Msa0188430:intron | 45.0% | |
| TACGTTACGTTACCTACCTG+AGG | - | chr2_1:3625710-3625729 | None:intergenic | 45.0% | |
| TACACTCCAGCTTTCCAACT+TGG | + | chr2_1:3625814-3625833 | Msa0188430:intron | 45.0% | |
| TTATCCGGAGATCTTGACCT+TGG | + | chr2_1:3625878-3625897 | Msa0188430:CDS | 45.0% | |
| GATACCAAGGTCAAGATCTC+CGG | - | chr2_1:3625885-3625904 | None:intergenic | 45.0% | |
| GATCTTGACCTTGGTATCGT+AGG | + | chr2_1:3625887-3625906 | Msa0188430:CDS | 45.0% | |
| TCTCCGTTACGTACTACATG+TGG | + | chr2_1:3626105-3626124 | Msa0188430:intron | 45.0% | |
| GAATGGGCGCTATGTCTAAT+AGG | - | chr2_1:3626164-3626183 | None:intergenic | 45.0% | |
| TTCAGAATGAGGGAGGGAAT+GGG | - | chr2_1:3626180-3626199 | None:intergenic | 45.0% | |
| CTTGTGTTCAGAATGAGGGA+GGG | - | chr2_1:3626186-3626205 | None:intergenic | 45.0% | |
| ACTTGTGTTCAGAATGAGGG+AGG | - | chr2_1:3626187-3626206 | None:intergenic | 45.0% | |
| ! | GGGTATAGTGTCTGAGATGT+TGG | - | chr2_1:3626251-3626270 | None:intergenic | 45.0% |
| !! | TTCTTTGAAGCACCCATACC+CGG | + | chr2_1:3626780-3626799 | Msa0188430:intron | 45.0% |
| TTTACATGAAGCCCGGGTAT+GGG | - | chr2_1:3626795-3626814 | None:intergenic | 45.0% | |
| ! | TTTTACATGAAGCCCGGGTA+TGG | - | chr2_1:3626796-3626815 | None:intergenic | 45.0% |
| GGTTCCAAGCAGGAAAATTG+TGG | - | chr2_1:3626936-3626955 | None:intergenic | 45.0% | |
| GGAAAAGTAAGGTTCCAAGC+AGG | - | chr2_1:3626946-3626965 | None:intergenic | 45.0% | |
| CGATCTTATCATTGTGCACG+AGG | + | chr2_1:3627013-3627032 | Msa0188430:CDS | 45.0% | |
| TATCATTGTGCACGAGGCTT+TGG | + | chr2_1:3627019-3627038 | Msa0188430:CDS | 45.0% | |
| AATCCAGTTGCAACTCTCAG+AGG | - | chr2_1:3627235-3627254 | None:intergenic | 45.0% | |
| GATAGCTATTGGGGTTTGGA+AGG | + | chr2_1:3627560-3627579 | Msa0188430:intron | 45.0% | |
| CTGGTTCATTTGAAAGGAGG+AGG | + | chr2_1:3628092-3628111 | Msa0188430:intron | 45.0% | |
| TTTGTTAGACTATCGAGCCC+AGG | + | chr2_1:3628133-3628152 | Msa0188430:intron | 45.0% | |
| GAACTCTGCTTCGTGATAAC+TGG | + | chr2_1:3628176-3628195 | Msa0188430:intron | 45.0% | |
| CAGCATCAACTAGATGGAGA+TGG | - | chr2_1:3628383-3628402 | None:intergenic | 45.0% | |
| GGGAATTGCTGATGCTATCT+TGG | + | chr2_1:3628471-3628490 | Msa0188430:CDS | 45.0% | |
| !!! | TGGAACTGTTTTGGAAAGCC+AGG | + | chr2_1:3628549-3628568 | Msa0188430:CDS | 45.0% |
| ! | AAAGATTGGAGGCACATCTG+AGG | + | chr2_1:3628773-3628792 | Msa0188430:CDS | 45.0% |
| ! | AAGATTGGAGGCACATCTGA+GGG | + | chr2_1:3628774-3628793 | Msa0188430:CDS | 45.0% |
| AAGAAACTGGAGTTTGGGAG+GGG | - | chr2_1:3628838-3628857 | None:intergenic | 45.0% | |
| CAGGTCACTGCAAATATGAG+AGG | + | chr2_1:3628887-3628906 | Msa0188430:intron | 45.0% | |
| ! | AGTACTGAGCCAACCATCAT+TGG | + | chr2_1:3628937-3628956 | Msa0188430:CDS | 45.0% |
| CAGAAAACGGGACTTACAGT+GGG | - | chr2_1:3629161-3629180 | None:intergenic | 45.0% | |
| TCCATCACGCTTGCAGAAAA+CGG | - | chr2_1:3629174-3629193 | None:intergenic | 45.0% | |
| ! | TTTCTGCAAGCGTGATGGAA+AGG | + | chr2_1:3629175-3629194 | Msa0188430:CDS | 45.0% |
| GTGTGATTCCTGTTGTCCTT+TGG | + | chr2_1:3629442-3629461 | Msa0188430:intron | 45.0% | |
| GAACGTAGTCAACAGGAAAC+TGG | - | chr2_1:3629630-3629649 | None:intergenic | 45.0% | |
| TTGATGAGGAAACTCCCAGA+TGG | + | chr2_1:3629704-3629723 | Msa0188430:CDS | 45.0% | |
| GTCCAAGTTTAGAAAGGAGC+TGG | - | chr2_1:3629732-3629751 | None:intergenic | 45.0% | |
| ! | TGATAGTATCTTTGGGGGTG+GGG | - | chr2_1:3629798-3629817 | None:intergenic | 45.0% |
| TTGGTTAGATAAGTAGGGGG+TGG | + | chr2_1:3629958-3629977 | Msa0188430:three_prime_UTR | 45.0% | |
| TGGTTAGATAAGTAGGGGGT+GGG | + | chr2_1:3629959-3629978 | Msa0188430:three_prime_UTR | 45.0% | |
| !! | AATTATAAATTATAAAGTAT+AGG | + | chr2_1:3627854-3627873 | Msa0188430:intron | 5.0% |
| CGGAGACTGGGTTTCCATTA+AGG | - | chr2_1:3625562-3625581 | None:intergenic | 50.0% | |
| AAGACGGATCTCTTTCCTGG+CGG | - | chr2_1:3625582-3625601 | None:intergenic | 50.0% | |
| ACCAAGACGGATCTCTTTCC+TGG | - | chr2_1:3625585-3625604 | None:intergenic | 50.0% | |
| !! | CGTCTTGGTTTGCCAAGCAA+AGG | + | chr2_1:3625596-3625615 | Msa0188430:CDS | 50.0% |
| GAAGACATCCGACCTTTGCT+TGG | - | chr2_1:3625611-3625630 | None:intergenic | 50.0% | |
| TGACACACTCGACCTTCTCA+AGG | + | chr2_1:3625631-3625650 | Msa0188430:CDS | 50.0% | |
| ! | TTTTTGCAGACACGCTGACC+TGG | - | chr2_1:3625937-3625956 | None:intergenic | 50.0% |
| GTTCAGAATGAGGGAGGGAA+TGG | - | chr2_1:3626181-3626200 | None:intergenic | 50.0% | |
| CTAGGGGTCTGCCAATTTAG+AGG | - | chr2_1:3626394-3626413 | None:intergenic | 50.0% | |
| ! | TGTCGCTTCACTTGCCAAGT+TGG | - | chr2_1:3626543-3626562 | None:intergenic | 50.0% |
| !! | TCTTTGAAGCACCCATACCC+GGG | + | chr2_1:3626781-3626800 | Msa0188430:intron | 50.0% |
| ! | AAGCCTCTGAGAGTTGCAAC+TGG | + | chr2_1:3627229-3627248 | Msa0188430:CDS | 50.0% |
| GACCCAGCTGAACAGTAAGA+AGG | - | chr2_1:3627354-3627373 | None:intergenic | 50.0% | |
| ! | GTGGCATTTTCGACTGCTGA+TGG | + | chr2_1:3627406-3627425 | Msa0188430:CDS | 50.0% |
| CAAAGACTATCTCTCACCGC+AGG | - | chr2_1:3627448-3627467 | None:intergenic | 50.0% | |
| TGGCAGCAGCATCAACTAGA+TGG | - | chr2_1:3628389-3628408 | None:intergenic | 50.0% | |
| GCGAGCAGGAAATCGATGAT+TGG | + | chr2_1:3628712-3628731 | Msa0188430:CDS | 50.0% | |
| TATGAGAGGAAGCAGTGCAG+AGG | + | chr2_1:3628901-3628920 | Msa0188430:CDS | 50.0% | |
| ! | TGAGCCAACCATCATTGGCT+GGG | + | chr2_1:3628942-3628961 | Msa0188430:CDS | 50.0% |
| ATCCTCGGTTGTCTATCTGC+AGG | + | chr2_1:3629133-3629152 | Msa0188430:intron | 50.0% | |
| TCCTCGGTTGTCTATCTGCA+GGG | + | chr2_1:3629134-3629153 | Msa0188430:intron | 50.0% | |
| GCAGAAAACGGGACTTACAG+TGG | - | chr2_1:3629162-3629181 | None:intergenic | 50.0% | |
| CCATCACGCTTGCAGAAAAC+GGG | - | chr2_1:3629173-3629192 | None:intergenic | 50.0% | |
| TCATGCTTGTCGCACACCAA+AGG | - | chr2_1:3629461-3629480 | None:intergenic | 50.0% | |
| ATGATGCAGATTGGAGGCAG+CGG | + | chr2_1:3629652-3629671 | Msa0188430:intron | 50.0% | |
| CGCCAGCTCCTTTCTAAACT+TGG | + | chr2_1:3629727-3629746 | Msa0188430:CDS | 50.0% | |
| CTACAAGCCGATGCAGAAGT+GGG | - | chr2_1:3629883-3629902 | None:intergenic | 50.0% | |
| TTAGATAAGTAGGGGGTGGG+AGG | + | chr2_1:3629962-3629981 | Msa0188430:three_prime_UTR | 50.0% | |
| TTCCACCTACCTCAATGAGC+TGG | + | chr2_1:3630068-3630087 | Msa0188430:three_prime_UTR | 50.0% | |
| GATGACCAGCTCATTGAGGT+AGG | - | chr2_1:3630076-3630095 | None:intergenic | 50.0% | |
| TCTCTTTCCTGGCGGAGACT+GGG | - | chr2_1:3625574-3625593 | None:intergenic | 55.0% | |
| ATCTCTTTCCTGGCGGAGAC+TGG | - | chr2_1:3625575-3625594 | None:intergenic | 55.0% | |
| GCCAGGAAAGAGATCCGTCT+TGG | + | chr2_1:3625581-3625600 | Msa0188430:CDS | 55.0% | |
| GGGGTCTGCCAATTTAGAGG+TGG | - | chr2_1:3626391-3626410 | None:intergenic | 55.0% | |
| TTCACTGACAACTCCTGCCG+AGG | + | chr2_1:3626635-3626654 | Msa0188430:intron | 55.0% | |
| CAACACTTATCAGCCTCGGC+AGG | - | chr2_1:3626651-3626670 | None:intergenic | 55.0% | |
| !! | GTGCACGAGGCTTTGGAGTA+TGG | + | chr2_1:3627026-3627045 | Msa0188430:CDS | 55.0% |
| TTCGACTGCTGATGGAGCAC+TGG | + | chr2_1:3627414-3627433 | Msa0188430:CDS | 55.0% | |
| AGGAAGCAGTGCAGAGGAAG+TGG | + | chr2_1:3628907-3628926 | Msa0188430:CDS | 55.0% | |
| CTGAGCCAACCATCATTGGC+TGG | + | chr2_1:3628941-3628960 | Msa0188430:CDS | 55.0% | |
| GCAACCCAGCCAATGATGGT+TGG | - | chr2_1:3628949-3628968 | None:intergenic | 55.0% | |
| ! | ACCATCATTGGCTGGGTTGC+AGG | + | chr2_1:3628949-3628968 | Msa0188430:CDS | 55.0% |
| ACCTGCAACCCAGCCAATGA+TGG | - | chr2_1:3628953-3628972 | None:intergenic | 55.0% | |
| TCCCTGCAGATAGACAACCG+AGG | - | chr2_1:3629138-3629157 | None:intergenic | 55.0% | |
| ! | CCCGTTTTCTGCAAGCGTGA+TGG | + | chr2_1:3629170-3629189 | Msa0188430:CDS | 55.0% |
| GTCGCACACCAAAGGACAAC+AGG | - | chr2_1:3629453-3629472 | None:intergenic | 55.0% | |
| CCTACAAGCCGATGCAGAAG+TGG | - | chr2_1:3629884-3629903 | None:intergenic | 55.0% | |
| !! | CCACTTCTGCATCGGCTTGT+AGG | + | chr2_1:3629881-3629900 | Msa0188430:three_prime_UTR | 55.0% |
| GACCAGCTCATTGAGGTAGG+TGG | - | chr2_1:3630073-3630092 | None:intergenic | 55.0% | |
| ATGGAAACCCAGTCTCCGCC+AGG | + | chr2_1:3625564-3625583 | Msa0188430:CDS | 60.0% | |
| !! | GACTGCTGATGGAGCACTGG+AGG | + | chr2_1:3627417-3627436 | Msa0188430:CDS | 60.0% |
| ACTATCGAGCCCAGGTCTCG+AGG | + | chr2_1:3628141-3628160 | Msa0188430:intron | 60.0% | |
| GGCAATAGGCCTCGAGACCT+GGG | - | chr2_1:3628153-3628172 | None:intergenic | 60.0% | |
| TGGCAATAGGCCTCGAGACC+TGG | - | chr2_1:3628154-3628173 | None:intergenic | 60.0% | |
| AGGCTGCTCTTGTTGCGAGC+AGG | + | chr2_1:3628698-3628717 | Msa0188430:intron | 60.0% | |
| GAGGCACATCTGAGGGCGAT+GGG | + | chr2_1:3628781-3628800 | Msa0188430:CDS | 60.0% | |
| AGGCACATCTGAGGGCGATG+GGG | + | chr2_1:3628782-3628801 | Msa0188430:CDS | 60.0% | |
| GAAAGGAGCTGGCGCCATCT+GGG | - | chr2_1:3629721-3629740 | None:intergenic | 60.0% | |
| AGAAAGGAGCTGGCGCCATC+TGG | - | chr2_1:3629722-3629741 | None:intergenic | 60.0% | |
| CATCGTCGTCGTCGTCGTCG+CGG | - | chr2_1:3625450-3625469 | None:intergenic | 65.0% | |
| ! | AGCACTGGAGGCAGCTCCTG+CGG | + | chr2_1:3627429-3627448 | Msa0188430:CDS | 65.0% |
| ! | GGAGGCACATCTGAGGGCGA+TGG | + | chr2_1:3628780-3628799 | Msa0188430:CDS | 65.0% |
| GAGGGCGATGGGGCAGTTCA+CGG | + | chr2_1:3628792-3628811 | Msa0188430:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 3625347 | 3630189 | 3625347 | ID=Msa0188430;Name=Msa0188430 |
| chr2_1 | mRNA | 3625347 | 3630189 | 3625347 | ID=Msa0188430-mRNA-1;Parent=Msa0188430;Name=Msa0188430-mRNA-1;_AED=0.13;_eAED=0.13;_QI=39|1|1|1|0.88|0.9|10|433|403 |
| chr2_1 | exon | 3625347 | 3625712 | 3625347 | ID=Msa0188430-mRNA-1:exon:1527;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3625824 | 3625937 | 3625824 | ID=Msa0188430-mRNA-1:exon:1528;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3627005 | 3627070 | 3627005 | ID=Msa0188430-mRNA-1:exon:1529;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3627154 | 3627261 | 3627154 | ID=Msa0188430-mRNA-1:exon:1530;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3627367 | 3627450 | 3627367 | ID=Msa0188430-mRNA-1:exon:1531;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3628469 | 3628570 | 3628469 | ID=Msa0188430-mRNA-1:exon:1532;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3628700 | 3628813 | 3628700 | ID=Msa0188430-mRNA-1:exon:1533;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3628890 | 3628970 | 3628890 | ID=Msa0188430-mRNA-1:exon:1534;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3629155 | 3629274 | 3629155 | ID=Msa0188430-mRNA-1:exon:1535;Parent=Msa0188430-mRNA-1 |
| chr2_1 | exon | 3629661 | 3630189 | 3629661 | ID=Msa0188430-mRNA-1:exon:1536;Parent=Msa0188430-mRNA-1 |
| chr2_1 | five_prime_UTR | 3625347 | 3625385 | 3625347 | ID=Msa0188430-mRNA-1:five_prime_utr;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3625386 | 3625712 | 3625386 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3625824 | 3625937 | 3625824 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3627005 | 3627070 | 3627005 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3627154 | 3627261 | 3627154 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3627367 | 3627450 | 3627367 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3628469 | 3628570 | 3628469 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3628700 | 3628813 | 3628700 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3628890 | 3628970 | 3628890 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3629155 | 3629274 | 3629155 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | CDS | 3629661 | 3629756 | 3629661 | ID=Msa0188430-mRNA-1:cds;Parent=Msa0188430-mRNA-1 |
| chr2_1 | three_prime_UTR | 3629757 | 3630189 | 3629757 | ID=Msa0188430-mRNA-1:three_prime_utr;Parent=Msa0188430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
