AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0339880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339880 MtrunA17_Chr2g0328601 93.090 796 39 4 1 795 11 791 0.0 1466
Msa0339880 MtrunA17_Chr4g0031981 78.726 691 147 0 105 795 114 804 0.0 1179
Msa0339880 MtrunA17_Chr5g0400161 88.889 72 8 0 659 730 1 72 5.19e-39 139
Msa0339880 MtrunA17_Chr2g0328911 24.597 496 315 19 295 779 286 733 1.46e-23 106
Msa0339880 MtrunA17_Chr1g0184291 31.156 199 110 7 590 779 165 345 3.20e-13 72.0
Msa0339880 MtrunA17_Chr2g0322151 30.968 155 92 3 630 779 200 344 1.49e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339880 AT3G46740.1 76.377 690 163 0 106 795 129 818 0.0 1151
Msa0339880 AT4G09080.1 62.169 415 136 7 383 795 1 396 3.50e-171 499
Msa0339880 AT4G09080.2 62.169 415 136 7 383 795 12 407 6.34e-171 499
Msa0339880 AT4G09080.3 70.462 325 93 3 473 795 2 325 5.77e-160 468
Msa0339880 AT1G35860.1 49.419 516 138 8 259 770 3 399 3.48e-155 458
Msa0339880 AT5G19620.1 24.597 496 325 15 295 783 269 722 3.20e-25 112
Msa0339880 AT3G44160.1 28.194 227 131 8 541 751 102 312 2.86e-13 72.8

Find 266 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2_4:-61149156 Msa0339880:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2_4:+61148563 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2_4:+61145891 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2_4:+61148884 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2_4:-61149041 Msa0339880:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2_4:+61145934 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2_4:-61148460 Msa0339880:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.253713 2_4:-61149734 Msa0339880:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2_4:-61149489 Msa0339880:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2_4:-61145575 Msa0339880:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2_4:-61149103 Msa0339880:CDS
GGTGGCAGTGGTGGTGGTGG+TGG 0.308359 2_4:-61149749 Msa0339880:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2_4:+61148885 None:intergenic
CTGATTGTCTTGATATTTGA+TGG 0.314401 2_4:-61145391 Msa0339880:three_prime_UTR
GGAGTATGCACATCCATATT+TGG 0.314750 2_4:-61148016 Msa0339880:CDS
TGGATGAAGTGCCACCAATA+TGG 0.315749 2_4:-61147903 Msa0339880:CDS
TTCTTTAGTACTTGGAGAAT+TGG 0.326717 2_4:-61145443 Msa0339880:three_prime_UTR
TTATCTACACCATCCAAATA+TGG 0.337762 2_4:+61148003 None:intergenic
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2_4:-61145942 Msa0339880:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2_4:+61149161 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2_4:+61148177 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2_4:-61149155 Msa0339880:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2_4:-61149731 Msa0339880:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.354370 2_4:-61149755 Msa0339880:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2_4:-61147743 Msa0339880:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2_4:-61149165 Msa0339880:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2_4:-61145770 Msa0339880:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2_4:+61149007 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2_4:-61145659 Msa0339880:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2_4:-61149710 Msa0339880:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2_4:-61145728 Msa0339880:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2_4:-61149713 Msa0339880:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2_4:-61149096 Msa0339880:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2_4:-61147686 Msa0339880:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2_4:-61149214 Msa0339880:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2_4:-61149404 Msa0339880:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2_4:-61149346 Msa0339880:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2_4:-61149121 Msa0339880:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2_4:+61145758 None:intergenic
ATTCACTTATGGACTTGTAA+TGG 0.409835 2_4:-61147732 Msa0339880:CDS
CCACCGCGATCAACCCATAT+TGG 0.412791 2_4:+61147889 None:intergenic
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2_4:-61149722 Msa0339880:CDS
GGTGGTGGACATGGTGGTGG+TGG 0.415456 2_4:-61149779 Msa0339880:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2_4:-61149488 Msa0339880:CDS
CATGGTGGTGGTGGAAGTAA+TGG 0.420049 2_4:-61149770 Msa0339880:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2_4:+61146096 None:intergenic
AATGGTGGCAGTGGTGGTGG+TGG 0.422882 2_4:-61149752 Msa0339880:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2_4:+61148486 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2_4:+61146103 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2_4:-61148567 Msa0339880:CDS
TGAATACTGGACTCAGCTTT+CGG 0.430080 2_4:+61147941 None:intergenic
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2_4:-61149782 Msa0339880:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2_4:+61146055 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2_4:+61149841 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2_4:-61149758 Msa0339880:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2_4:-61145941 Msa0339880:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2_4:-61145784 Msa0339880:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2_4:-61149450 Msa0339880:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2_4:+61149847 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2_4:-61148592 Msa0339880:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2_4:-61147620 Msa0339880:CDS
GTGGTGGTGGTGGAGGTTGG+TGG 0.447719 2_4:-61149739 Msa0339880:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2_4:+61149608 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2_4:-61145653 Msa0339880:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2_4:+61148480 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2_4:+61149865 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2_4:-61149728 Msa0339880:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2_4:+61146097 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2_4:-61145636 Msa0339880:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2_4:+61145628 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2_4:-61148957 Msa0339880:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2_4:-61146006 Msa0339880:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2_4:+61148168 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2_4:-61149716 Msa0339880:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2_4:+61149806 None:intergenic
TGGTGGCACTTCATCCAGCC+CGG 0.473493 2_4:+61147909 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2_4:+61149889 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2_4:-61148037 Msa0339880:CDS
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2_4:+61146012 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2_4:-61149071 Msa0339880:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2_4:+61149961 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2_4:-61145596 Msa0339880:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2_4:-61145641 Msa0339880:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2_4:-61145919 Msa0339880:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2_4:+61149859 None:intergenic
AAGCTGAGTCCAGTATTCAC+TGG 0.485593 2_4:-61147937 Msa0339880:CDS
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2_4:-61149102 Msa0339880:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2_4:+61147979 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2_4:-61148448 Msa0339880:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2_4:+61148906 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2_4:+61145998 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2_4:-61149761 Msa0339880:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2_4:-61148259 Msa0339880:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2_4:+61149805 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2_4:-61149231 Msa0339880:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2_4:-61149635 Msa0339880:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2_4:+61149866 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2_4:-61149431 Msa0339880:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2_4:+61148384 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2_4:+61149888 None:intergenic
TGGATTCTGCAATGATCCCT+TGG 0.494510 2_4:+61145354 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2_4:-61147545 Msa0339880:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2_4:+61145680 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2_4:-61146015 Msa0339880:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2_4:-61149794 Msa0339880:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2_4:+61149918 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2_4:-61149207 Msa0339880:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2_4:-61145685 Msa0339880:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2_4:-61149800 Msa0339880:CDS
AGCTGAGTCCAGTATTCACT+GGG 0.498536 2_4:-61147936 Msa0339880:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2_4:-61145929 Msa0339880:CDS
GGTGGCACTTCATCCAGCCC+GGG 0.498938 2_4:+61147910 None:intergenic
AACAGCTTACATGAAGAGTT+CGG 0.499486 2_4:+61147971 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2_4:+61149917 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2_4:-61145755 Msa0339880:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2_4:+61145935 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2_4:-61149971 Msa0339880:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2_4:-61149311 Msa0339880:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2_4:-61149136 Msa0339880:CDS
GGATGAAGTGCCACCAATAT+GGG 0.507612 2_4:-61147902 Msa0339880:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2_4:+61149269 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2_4:-61149369 Msa0339880:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2_4:+61149979 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2_4:-61149788 Msa0339880:CDS
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2_4:-61149403 Msa0339880:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2_4:-61147525 Msa0339880:intron
CAGAAGTACAATACCAGAGT+TGG 0.521701 2_4:+61148366 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2_4:-61146141 Msa0339880:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2_4:-61149377 Msa0339880:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2_4:-61145677 Msa0339880:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2_4:-61148416 Msa0339880:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2_4:+61149879 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2_4:+61149823 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2_4:-61146129 Msa0339880:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2_4:-61145940 Msa0339880:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2_4:-61148999 Msa0339880:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2_4:-61149989 Msa0339880:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2_4:+61147616 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2_4:-61145707 Msa0339880:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2_4:+61149835 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2_4:-61145671 Msa0339880:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2_4:-61149201 Msa0339880:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2_4:+61145964 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2_4:-61149279 Msa0339880:CDS
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2_4:-61149009 Msa0339880:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2_4:+61149798 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2_4:-61148591 Msa0339880:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2_4:-61149051 Msa0339880:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2_4:+61149819 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2_4:-61145899 Msa0339880:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2_4:-61145678 Msa0339880:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2_4:+61147620 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2_4:-61149253 Msa0339880:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2_4:-61149417 Msa0339880:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2_4:-61146003 Msa0339880:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2_4:-61149196 Msa0339880:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2_4:+61149856 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2_4:-61145706 Msa0339880:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2_4:-61147629 Msa0339880:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2_4:-61146135 Msa0339880:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2_4:-61148379 Msa0339880:intron
TGGAAATCTTAATACCAAAG+AGG 0.562046 2_4:-61149021 Msa0339880:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2_4:+61149829 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2_4:+61149925 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2_4:+61149926 None:intergenic
CCGCGATCAACCCATATTGG+TGG 0.564600 2_4:+61147892 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2_4:+61149470 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2_4:-61148942 Msa0339880:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2_4:+61146118 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2_4:+61146016 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2_4:-61146061 Msa0339880:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2_4:-61149456 Msa0339880:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2_4:+61149665 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2_4:-61149472 Msa0339880:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2_4:+61149893 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2_4:-61148202 Msa0339880:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2_4:+61149853 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2_4:-61148167 Msa0339880:intron
GGATGGAACGAGAGAAGACA+TGG 0.579164 2_4:+61150000 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2_4:-61149211 Msa0339880:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2_4:-61148223 Msa0339880:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2_4:+61149173 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2_4:+61149370 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2_4:-61149226 Msa0339880:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2_4:-61148503 Msa0339880:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2_4:+61148385 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2_4:-61148402 Msa0339880:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2_4:-61146054 Msa0339880:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2_4:-61148898 Msa0339880:intron
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2_4:-61149719 Msa0339880:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2_4:-61149797 Msa0339880:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2_4:-61146048 Msa0339880:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2_4:+61149864 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2_4:-61149345 Msa0339880:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2_4:-61148396 Msa0339880:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2_4:+61149154 None:intergenic
GGGATCATTGCAGAATCCAC+AGG 0.594493 2_4:-61145350 Msa0339880:three_prime_UTR
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2_4:+61149838 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2_4:-61149258 Msa0339880:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2_4:+61146104 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2_4:-61145994 Msa0339880:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2_4:-61145928 Msa0339880:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2_4:+61146018 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2_4:+61146082 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2_4:-61147647 Msa0339880:CDS
TATGGTGTCAGTTGTTCCTG+TGG 0.600323 2_4:+61145334 None:intergenic
TGGTACTGGCATTGATCACA+TGG 0.604743 2_4:-61147606 Msa0339880:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2_4:-61148012 Msa0339880:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2_4:-61149225 Msa0339880:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2_4:-61147662 Msa0339880:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2_4:+61149983 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2_4:+61146079 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2_4:+61145681 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2_4:+61149281 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2_4:+61147623 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2_4:-61149145 Msa0339880:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2_4:+61146017 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2_4:-61148392 Msa0339880:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2_4:+61149784 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2_4:-61149785 Msa0339880:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2_4:-61148436 Msa0339880:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2_4:-61148393 Msa0339880:CDS
GTGGCACTTCATCCAGCCCG+GGG 0.624430 2_4:+61147911 None:intergenic
CCATGGAGGACAAGAACTGG+CGG 0.627462 2_4:+61146015 None:intergenic
CTACTAGTCTAGTATTAGCA+CGG 0.628634 2_4:+61145473 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2_4:-61145717 Msa0339880:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2_4:-61149070 Msa0339880:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2_4:-61146058 Msa0339880:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2_4:-61148483 Msa0339880:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2_4:-61149386 Msa0339880:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2_4:-61145602 Msa0339880:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2_4:+61148907 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2_4:-61149252 Msa0339880:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2_4:-61149085 Msa0339880:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2_4:-61147707 Msa0339880:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2_4:-61148256 Msa0339880:CDS
TCAATATTAAAGGTGTTACC+CGG 0.639699 2_4:+61148573 None:intergenic
GGTGGTGGTGGAAGTAATGG+TGG 0.642772 2_4:-61149767 Msa0339880:CDS
ACACCTTTAATATTGAAGCA+GGG 0.649166 2_4:-61148566 Msa0339880:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2_4:-61149342 Msa0339880:CDS
CCAATATGGGTTGATCGCGG+TGG 0.652292 2_4:-61147889 Msa0339880:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2_4:+61145598 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2_4:+61148241 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2_4:-61148484 Msa0339880:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2_4:-61148480 Msa0339880:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2_4:-61149593 Msa0339880:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2_4:-61149986 Msa0339880:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2_4:+61148252 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2_4:-61146083 Msa0339880:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2_4:-61147668 Msa0339880:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2_4:-61149471 Msa0339880:CDS
CCACCAATATGGGTTGATCG+CGG 0.691172 2_4:-61147892 Msa0339880:CDS
TGTCAAAGCTAATATTACAG+AGG 0.693959 2_4:-61147866 Msa0339880:intron
CTGAGTCCAGTATTCACTGG+GGG 0.694649 2_4:-61147934 Msa0339880:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2_4:+61145992 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2_4:+61146001 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2_4:+61147650 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2_4:-61147626 Msa0339880:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2_4:-61149485 Msa0339880:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2_4:+61147743 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2_4:-61147665 Msa0339880:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2_4:-61145896 Msa0339880:intron
GATCAATGCCAGTACCACCG+AGG 0.774073 2_4:+61147612 None:intergenic
GCTGAGTCCAGTATTCACTG+GGG 0.777122 2_4:-61147935 Msa0339880:CDS
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2_4:+61149882 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2_4:+61148908 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG - chr2_4:61149073-61149092 Msa0339880:CDS 0.0%
!!! TTTATATAAAATCAATTTTG+TGG + chr2_4:61149046-61149065 None:intergenic 10.0%
!!! GTTTTTAAATTACATTTTTT+TGG - chr2_4:61149854-61149873 Msa0339880:CDS 10.0%
!! ATATTATATTATACCTCTTT+GGG + chr2_4:61146480-61146499 None:intergenic 15.0%
!! AATATTATATTATACCTCTT+TGG + chr2_4:61146481-61146500 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG - chr2_4:61146531-61146550 Msa0339880:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG - chr2_4:61146614-61146633 Msa0339880:intron 15.0%
!!! TATTTTTACATGAACTATTT+AGG - chr2_4:61147538-61147557 Msa0339880:CDS 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG + chr2_4:61148673-61148692 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG + chr2_4:61148922-61148941 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG - chr2_4:61148982-61149001 Msa0339880:CDS 15.0%
!!! CTAAAACAAAATTTTTAATG+TGG + chr2_4:61149099-61149118 None:intergenic 15.0%
!!! CACATTAAAAATTTTGTTTT+AGG - chr2_4:61149097-61149116 Msa0339880:CDS 15.0%
!! AATTGAATAGTTATATTGAC+AGG + chr2_4:61145757-61145776 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG - chr2_4:61146530-61146549 Msa0339880:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG - chr2_4:61147271-61147290 Msa0339880:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG + chr2_4:61147919-61147938 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG - chr2_4:61147917-61147936 Msa0339880:CDS 20.0%
!! AAGGCTTAAAGATAATAAAA+AGG + chr2_4:61147953-61147972 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG + chr2_4:61147972-61147991 None:intergenic 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG - chr2_4:61147972-61147991 Msa0339880:CDS 20.0%
!! TTTACCAATACAATTATAAG+AGG + chr2_4:61147979-61147998 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG + chr2_4:61148105-61148124 None:intergenic 20.0%
!! TTGAAATGAAAGAACATTTA+GGG + chr2_4:61148178-61148197 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG + chr2_4:61148179-61148198 None:intergenic 20.0%
!!! TTTTTTCACACATAATTTTG+AGG + chr2_4:61148896-61148915 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG - chr2_4:61148896-61148915 Msa0339880:intron 20.0%
!!! TTACATTTTTTTGGTTTAAG+TGG - chr2_4:61149863-61149882 Msa0339880:CDS 20.0%
!!! TACATTTTTTTGGTTTAAGT+GGG - chr2_4:61149864-61149883 Msa0339880:CDS 20.0%
! TGAAATGATTTCTATTGTTC+CGG - chr2_4:61145873-61145892 Msa0339880:intron 25.0%
! AAGTTTCGTTGTATTAATGT+TGG - chr2_4:61146051-61146070 Msa0339880:CDS 25.0%
! TTATCTGTTATATATATGGG+AGG - chr2_4:61146534-61146553 Msa0339880:intron 25.0%
! TCTTATTGTTGTCAATTTAG+AGG - chr2_4:61146567-61146586 Msa0339880:intron 25.0%
! CTTATTGTTGTCAATTTAGA+GGG - chr2_4:61146568-61146587 Msa0339880:intron 25.0%
! AGGCAAATAATCATTGAAAT+TGG + chr2_4:61146650-61146669 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG - chr2_4:61146848-61146867 Msa0339880:intron 25.0%
! AGGCATAATTGTTGAAATTA+AGG - chr2_4:61146902-61146921 Msa0339880:intron 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG - chr2_4:61146914-61146933 Msa0339880:intron 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG - chr2_4:61147087-61147106 Msa0339880:intron 25.0%
! GGATATATAAGACTGAATAT+TGG + chr2_4:61148084-61148103 None:intergenic 25.0%
! AGAAAAAAATAGTCCATCAA+CGG + chr2_4:61148236-61148255 None:intergenic 25.0%
!! CAACTTTTATATTGATCCAA+AGG + chr2_4:61148348-61148367 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG - chr2_4:61148346-61148365 Msa0339880:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG + chr2_4:61148497-61148516 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG - chr2_4:61148916-61148935 Msa0339880:CDS 25.0%
! GTCTTAAATAGAAAACATCA+GGG + chr2_4:61149144-61149163 None:intergenic 25.0%
! AGTCTTAAATAGAAAACATC+AGG + chr2_4:61149145-61149164 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG - chr2_4:61149211-61149230 Msa0339880:CDS 25.0%
! TGATAAAGAATCATAAAACG+AGG + chr2_4:61149505-61149524 None:intergenic 25.0%
TCTGAAGAATTTGATTCTCA+TGG - chr2_4:61145727-61145746 Msa0339880:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG - chr2_4:61145769-61145788 Msa0339880:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG - chr2_4:61145832-61145851 Msa0339880:intron 30.0%
GAAATGATTTCTATTGTTCC+GGG - chr2_4:61145874-61145893 Msa0339880:intron 30.0%
ATCTAGTGGAATGTTTGAAA+AGG - chr2_4:61145945-61145964 Msa0339880:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG - chr2_4:61145958-61145977 Msa0339880:CDS 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG - chr2_4:61145959-61145978 Msa0339880:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG - chr2_4:61146016-61146035 Msa0339880:CDS 30.0%
!! TTCATATAGTGAGAGTACTT+GGG - chr2_4:61146017-61146036 Msa0339880:CDS 30.0%
ATATCAGAATCCAACTCAAT+CGG + chr2_4:61146096-61146115 None:intergenic 30.0%
TGGAAATCTTAATACCAAAG+AGG - chr2_4:61146341-61146360 Msa0339880:intron 30.0%
TATATATATGGGAGGTTCAT+AGG - chr2_4:61146542-61146561 Msa0339880:intron 30.0%
CAATGATTATTTGCCTGTTT+AGG - chr2_4:61146654-61146673 Msa0339880:intron 30.0%
! TATTTGCCTGTTTAGGATAT+CGG - chr2_4:61146661-61146680 Msa0339880:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG - chr2_4:61146718-61146737 Msa0339880:intron 30.0%
! TAAAACCAATGAGCAGTTTT+AGG + chr2_4:61146726-61146745 None:intergenic 30.0%
!! TCAATATTAAAGGTGTTACC+CGG + chr2_4:61146792-61146811 None:intergenic 30.0%
AACACCTTTAATATTGAAGC+AGG - chr2_4:61146795-61146814 Msa0339880:intron 30.0%
ACACCTTTAATATTGAAGCA+GGG - chr2_4:61146796-61146815 Msa0339880:intron 30.0%
GAAAAAAAAAAATCCCTTGG+TGG + chr2_4:61147048-61147067 None:intergenic 30.0%
GCAGAAAAAAAAAAATCCCT+TGG + chr2_4:61147051-61147070 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG - chr2_4:61147128-61147147 Msa0339880:intron 30.0%
TTATCTACACCATCCAAATA+TGG + chr2_4:61147362-61147381 None:intergenic 30.0%
TGTCAAAGCTAATATTACAG+AGG - chr2_4:61147496-61147515 Msa0339880:intron 30.0%
ACATGAACTATTTAGGCTAA+TGG - chr2_4:61147545-61147564 Msa0339880:CDS 30.0%
ATTCACTTATGGACTTGTAA+TGG - chr2_4:61147630-61147649 Msa0339880:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG - chr2_4:61147676-61147695 Msa0339880:CDS 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG + chr2_4:61147875-61147894 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG - chr2_4:61147883-61147902 Msa0339880:CDS 30.0%
GTAGTCACATAAAACAAGAT+AGG + chr2_4:61148002-61148021 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG + chr2_4:61148139-61148158 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG - chr2_4:61148197-61148216 Msa0339880:CDS 30.0%
GTTAACCATAGGATCTAAAT+AGG + chr2_4:61148205-61148224 None:intergenic 30.0%
GTAAACCTATCTACAAAGAT+AGG - chr2_4:61148372-61148391 Msa0339880:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG - chr2_4:61148718-61148737 Msa0339880:intron 30.0%
! ACAAGATATCTATGTTTTCC+AGG - chr2_4:61148830-61148849 Msa0339880:intron 30.0%
! CAAGATATCTATGTTTTCCA+GGG - chr2_4:61148831-61148850 Msa0339880:intron 30.0%
AAAAAGGCTTCAATTACTCT+TGG - chr2_4:61148998-61149017 Msa0339880:CDS 30.0%
!! TAATCAGAAAGTATTGTCAC+AGG + chr2_4:61149186-61149205 None:intergenic 30.0%
!! AGAGTAAAAGCATCATAACT+TGG + chr2_4:61149401-61149420 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG - chr2_4:61149401-61149420 Msa0339880:CDS 30.0%
! GGTGCATTATATTTACGTTT+TGG - chr2_4:61149787-61149806 Msa0339880:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG - chr2_4:61149794-61149813 Msa0339880:CDS 30.0%
!! GACTTGTTTTCTTTAGTACT+TGG - chr2_4:61149911-61149930 Msa0339880:CDS 30.0%
TTCTTTAGTACTTGGAGAAT+TGG - chr2_4:61149919-61149938 Msa0339880:CDS 30.0%
CTGATTGTCTTGATATTTGA+TGG - chr2_4:61149971-61149990 Msa0339880:CDS 30.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG + chr2_4:61145417-61145436 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG - chr2_4:61145678-61145697 Msa0339880:CDS 35.0%
TTGGATAGTTTGACATCTAG+TGG - chr2_4:61145931-61145950 Msa0339880:CDS 35.0%
ATCTCCAAATGAACGGTATT+CGG + chr2_4:61146204-61146223 None:intergenic 35.0%
TACCGTTCATTTGGAGATTA+TGG - chr2_4:61146206-61146225 Msa0339880:intron 35.0%
ACCGTTCATTTGGAGATTAT+GGG - chr2_4:61146207-61146226 Msa0339880:intron 35.0%
ACCCATAATCTCCAAATGAA+CGG + chr2_4:61146211-61146230 None:intergenic 35.0%
TAGGTTGTTGCAGAAGATTA+GGG - chr2_4:61146260-61146279 Msa0339880:intron 35.0%
AGAAGTGGTATCATGATCAA+GGG - chr2_4:61146292-61146311 Msa0339880:intron 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG - chr2_4:61146321-61146340 Msa0339880:intron 35.0%
GTTCAGTTCATTGATAAGCT+TGG - chr2_4:61146405-61146424 Msa0339880:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG - chr2_4:61146662-61146681 Msa0339880:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG - chr2_4:61146739-61146758 Msa0339880:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG - chr2_4:61146752-61146771 Msa0339880:intron 35.0%
CTTCCCTGCTTCAATATTAA+AGG + chr2_4:61146802-61146821 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG - chr2_4:61146859-61146878 Msa0339880:intron 35.0%
AAAAGAGATGGATCAGAAGA+CGG - chr2_4:61146926-61146945 Msa0339880:intron 35.0%
! TCAATTTTCTACAACCACCA+AGG - chr2_4:61147031-61147050 Msa0339880:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG - chr2_4:61147032-61147051 Msa0339880:intron 35.0%
TCAAAAGAAATAGTTCCACC+AGG + chr2_4:61147124-61147143 None:intergenic 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG - chr2_4:61147304-61147323 Msa0339880:intron 35.0%
GGATGATCTTGCATTTAAGA+TGG - chr2_4:61147325-61147344 Msa0339880:intron 35.0%
TATGCACATCCATATTTGGA+TGG - chr2_4:61147350-61147369 Msa0339880:intron 35.0%
AACAGCTTACATGAAGAGTT+CGG + chr2_4:61147394-61147413 None:intergenic 35.0%
CCATAAGTGAATTTACTCTG+TGG + chr2_4:61147622-61147641 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG - chr2_4:61147619-61147638 Msa0339880:CDS 35.0%
! GATAACACACGTTTTGTGAA+TGG - chr2_4:61147805-61147824 Msa0339880:intron 35.0%
! TTAACATTTTCCTCCGTTGA+TGG - chr2_4:61148220-61148239 Msa0339880:CDS 35.0%
AAAAAATAGTCCATCAACGG+AGG + chr2_4:61148233-61148252 None:intergenic 35.0%
ACTTGTCTAGTTGTATCCTT+TGG - chr2_4:61148329-61148348 Msa0339880:intron 35.0%
CTACTCCTATCTTTGTAGAT+AGG + chr2_4:61148380-61148399 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG - chr2_4:61148383-61148402 Msa0339880:CDS 35.0%
ACAAAGATAGGAGTAGTAGA+GGG - chr2_4:61148384-61148403 Msa0339880:CDS 35.0%
TAGTCTATAGTGTGCTATAG+CGG - chr2_4:61148431-61148450 Msa0339880:CDS 35.0%
! CCGACATCATATAATGGAAA+AGG + chr2_4:61148721-61148740 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG + chr2_4:61148727-61148746 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG - chr2_4:61148726-61148745 Msa0339880:intron 35.0%
AATGTGTAGTTAGAGCTCAA+TGG + chr2_4:61148763-61148782 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG - chr2_4:61148784-61148803 Msa0339880:intron 35.0%
CATAGATATCTTGTCCTCAA+AGG + chr2_4:61148824-61148843 None:intergenic 35.0%
TAAATAGAAAACATCAGGGC+CGG + chr2_4:61149140-61149159 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+TGG - chr2_4:61149404-61149423 Msa0339880:CDS 35.0%
TGTAACCCCTTACAGAATAA+GGG + chr2_4:61149430-61149449 None:intergenic 35.0%
TTGTAACCCCTTACAGAATA+AGG + chr2_4:61149431-61149450 None:intergenic 35.0%
GAATGATCTAGGAAGTTCAA+AGG - chr2_4:61149645-61149664 Msa0339880:CDS 35.0%
GAAGTTCAAAGGATGTCAAA+GGG - chr2_4:61149656-61149675 Msa0339880:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG + chr2_4:61149767-61149786 None:intergenic 35.0%
! CTACTAGTCTAGTATTAGCA+CGG + chr2_4:61149892-61149911 None:intergenic 35.0%
!!! TGGTTTTTATTTTTGCGCCA+AGG - chr2_4:61149991-61150010 Msa0339880:CDS 35.0%
!!! GGTTTTTATTTTTGCGCCAA+GGG - chr2_4:61149992-61150011 Msa0339880:CDS 35.0%
! AACAAACCCGTTTTCCTCTA+CGG - chr2_4:61145550-61145569 Msa0339880:exon 40.0%
ATGATTTCTATTGTTCCGGG+CGG - chr2_4:61145877-61145896 Msa0339880:intron 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG - chr2_4:61146020-61146039 Msa0339880:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG - chr2_4:61146104-61146123 Msa0339880:CDS 40.0%
TGATATGACTGAGAAGGAGA+GGG - chr2_4:61146110-61146129 Msa0339880:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG - chr2_4:61146131-61146150 Msa0339880:CDS 40.0%
AACAGTATTTGAGTCAGGAG+AGG - chr2_4:61146136-61146155 Msa0339880:intron 40.0%
ACAGTATTTGAGTCAGGAGA+GGG - chr2_4:61146137-61146156 Msa0339880:intron 40.0%
ACGGTATTCGGCAAAATACA+CGG + chr2_4:61146192-61146211 None:intergenic 40.0%
TTTGCCGAATACCGTTCATT+TGG - chr2_4:61146197-61146216 Msa0339880:intron 40.0%
TGGAGATTATGGGTATGATG+AGG - chr2_4:61146217-61146236 Msa0339880:intron 40.0%
TGGGTATGATGAGGAAAGAA+AGG - chr2_4:61146226-61146245 Msa0339880:intron 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG - chr2_4:61146241-61146260 Msa0339880:intron 40.0%
CTAGGTTGTTGCAGAAGATT+AGG - chr2_4:61146259-61146278 Msa0339880:intron 40.0%
GTTGCAGAAGATTAGGGATA+AGG - chr2_4:61146266-61146285 Msa0339880:intron 40.0%
TTAGGGATAAGGTTCAGAAG+TGG - chr2_4:61146277-61146296 Msa0339880:intron 40.0%
CAGAAGTGGTATCATGATCA+AGG - chr2_4:61146291-61146310 Msa0339880:intron 40.0%
TACCAAAGAGGTTGTTTGTG+AGG - chr2_4:61146353-61146372 Msa0339880:intron 40.0%
AACCTCACAAACAACCTCTT+TGG + chr2_4:61146358-61146377 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG - chr2_4:61146363-61146382 Msa0339880:intron 40.0%
AAGCTTGGCAATGTTGTTGA+AGG - chr2_4:61146420-61146439 Msa0339880:intron 40.0%
AAGCTCTCTATGTATCACAG+GGG + chr2_4:61146457-61146476 None:intergenic 40.0%
GAAGCTCTCTATGTATCACA+GGG + chr2_4:61146458-61146477 None:intergenic 40.0%
AACAACCCGATATCCTAAAC+AGG + chr2_4:61146670-61146689 None:intergenic 40.0%
! ACTGAATGGAGTATTATCCC+TGG - chr2_4:61146960-61146979 Msa0339880:intron 40.0%
! CAGAAGTACAATACCAGAGT+TGG + chr2_4:61146999-61147018 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG + chr2_4:61147188-61147207 None:intergenic 40.0%
AATGAAGAATCTCAGCAGAC+TGG + chr2_4:61147231-61147250 None:intergenic 40.0%
CATCCTAGCAGAAAACATGA+AGG + chr2_4:61147310-61147329 None:intergenic 40.0%
GGAGTATGCACATCCATATT+TGG - chr2_4:61147346-61147365 Msa0339880:intron 40.0%
TGAATACTGGACTCAGCTTT+CGG + chr2_4:61147424-61147443 None:intergenic 40.0%
!! AATGGTCAAAGAGTACTACC+TGG - chr2_4:61147694-61147713 Msa0339880:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG - chr2_4:61147817-61147836 Msa0339880:intron 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG + chr2_4:61148147-61148166 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG + chr2_4:61148216-61148235 None:intergenic 40.0%
! ATATCTATGTTTTCCAGGGC+CGG - chr2_4:61148835-61148854 Msa0339880:intron 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG - chr2_4:61149113-61149132 Msa0339880:CDS 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG - chr2_4:61149114-61149133 Msa0339880:CDS 40.0%
TAAACCGTGTCAGAGTTAGT+TGG + chr2_4:61149286-61149305 None:intergenic 40.0%
! GTTTATCCAGTTGATGTCTG+TGG - chr2_4:61149301-61149320 Msa0339880:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG - chr2_4:61149433-61149452 Msa0339880:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG - chr2_4:61149434-61149453 Msa0339880:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG - chr2_4:61149592-61149611 Msa0339880:CDS 40.0%
TACACATGCATGCCTTTAAC+AGG + chr2_4:61149607-61149626 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG - chr2_4:61149607-61149626 Msa0339880:CDS 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG - chr2_4:61149623-61149642 Msa0339880:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG - chr2_4:61149655-61149674 Msa0339880:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG + chr2_4:61149684-61149703 None:intergenic 40.0%
ATTCGCCTATAGACTTCTGT+AGG + chr2_4:61149685-61149704 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG - chr2_4:61149684-61149703 Msa0339880:CDS 40.0%
ACAGAAGTCTATAGGCGAAT+GGG - chr2_4:61149685-61149704 Msa0339880:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG - chr2_4:61149703-61149722 Msa0339880:CDS 40.0%
CAAGGTTCATCTTATGGTGT+TGG - chr2_4:61149709-61149728 Msa0339880:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG - chr2_4:61149760-61149779 Msa0339880:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG - chr2_4:61149766-61149785 Msa0339880:CDS 40.0%
CTCGTTCCATCCAACAACTT+CGG - chr2_4:61145373-61145392 Msa0339880:three_prime_UTR 45.0%
TTGATGCATTGAGGGAGAGA+GGG + chr2_4:61145439-61145458 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG + chr2_4:61145447-61145466 None:intergenic 45.0%
! TGAGAGCAGTTGATGCATTG+AGG + chr2_4:61145448-61145467 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG + chr2_4:61145536-61145555 None:intergenic 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG + chr2_4:61145542-61145561 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG + chr2_4:61145546-61145565 None:intergenic 45.0%
ACAAATGCCGATGGAACTGT+TGG - chr2_4:61145985-61146004 Msa0339880:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG + chr2_4:61145995-61146014 None:intergenic 45.0%
CGATGGAACTGTTGGAATCA+CGG - chr2_4:61145993-61146012 Msa0339880:CDS 45.0%
! AACTCAATCGGCTTTGTCTG+CGG + chr2_4:61146084-61146103 None:intergenic 45.0%
CTGATATGACTGAGAAGGAG+AGG - chr2_4:61146109-61146128 Msa0339880:CDS 45.0%
GTATAAGAGGAGGATGGAGA+AGG - chr2_4:61146161-61146180 Msa0339880:intron 45.0%
GGAAGCTCTCTATGTATCAC+AGG + chr2_4:61146459-61146478 None:intergenic 45.0%
ACATAGAGAGCTTCCCAAAG+AGG - chr2_4:61146464-61146483 Msa0339880:intron 45.0%
ATTGGATTAACAGCTGCGTC+CGG - chr2_4:61146770-61146789 Msa0339880:intron 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG - chr2_4:61147139-61147158 Msa0339880:intron 45.0%
GGACTGAATAGAGCTCTTAG+TGG - chr2_4:61147160-61147179 Msa0339880:intron 45.0%
ACATGAAGAGTTCGGTTTCG+TGG + chr2_4:61147386-61147405 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG - chr2_4:61147425-61147444 Msa0339880:intron 45.0%
AGCTGAGTCCAGTATTCACT+GGG - chr2_4:61147426-61147445 Msa0339880:intron 45.0%
! TGGATGAAGTGCCACCAATA+TGG - chr2_4:61147459-61147478 Msa0339880:intron 45.0%
! GGATGAAGTGCCACCAATAT+GGG - chr2_4:61147460-61147479 Msa0339880:intron 45.0%
GAGATAACAACTCGTGACGA+AGG - chr2_4:61147655-61147674 Msa0339880:CDS 45.0%
!! TGGTACTGGCATTGATCACA+TGG - chr2_4:61147756-61147775 Msa0339880:intron 45.0%
TGGAGCGAGAAATATGTTCC+AGG - chr2_4:61147837-61147856 Msa0339880:intron 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG - chr2_4:61148390-61148409 Msa0339880:CDS 45.0%
GTAGTAGAGGGAACAGGTTA+AGG - chr2_4:61148396-61148415 Msa0339880:CDS 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG + chr2_4:61148534-61148553 None:intergenic 45.0%
TTACGGCTGCTAAATGCTTC+AGG - chr2_4:61148534-61148553 Msa0339880:CDS 45.0%
TACGGCTGCTAAATGCTTCA+GGG - chr2_4:61148535-61148554 Msa0339880:CDS 45.0%
TCCAACTTGCACTACCTTTG+AGG - chr2_4:61148807-61148826 Msa0339880:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG + chr2_4:61148811-61148830 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG - chr2_4:61149221-61149240 Msa0339880:CDS 45.0%
GCGATTGAAGAATGGGAACT+GGG + chr2_4:61149261-61149280 None:intergenic 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG + chr2_4:61149268-61149287 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG + chr2_4:61149269-61149288 None:intergenic 45.0%
! TATCCAGTTGATGTCTGTGG+AGG - chr2_4:61149304-61149323 Msa0339880:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG - chr2_4:61149420-61149439 Msa0339880:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG - chr2_4:61149421-61149440 Msa0339880:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG - chr2_4:61149443-61149462 Msa0339880:CDS 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG - chr2_4:61149622-61149641 Msa0339880:CDS 45.0%
GGAACCCTACAGAAGTCTAT+AGG - chr2_4:61149677-61149696 Msa0339880:CDS 45.0%
TGGATTCTGCAATGATCCCT+TGG + chr2_4:61150011-61150030 None:intergenic 45.0%
! TATGGTGTCAGTTGTTCCTG+TGG + chr2_4:61150031-61150050 None:intergenic 45.0%
GGATGGAACGAGAGAAGACA+TGG + chr2_4:61145365-61145384 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG - chr2_4:61145376-61145395 Msa0339880:three_prime_UTR 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG + chr2_4:61145413-61145432 None:intergenic 50.0%
GTTGATGCATTGAGGGAGAG+AGG + chr2_4:61145440-61145459 None:intergenic 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG + chr2_4:61145559-61145578 None:intergenic 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG + chr2_4:61145560-61145579 None:intergenic 50.0%
!! CATGGTGGTGGTGGAAGTAA+TGG - chr2_4:61145592-61145611 Msa0339880:CDS 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG - chr2_4:61145640-61145659 Msa0339880:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG - chr2_4:61145665-61145684 Msa0339880:CDS 50.0%
TCATCAGCAATAGCTGCTGC+CGG + chr2_4:61145700-61145719 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG - chr2_4:61145912-61145931 Msa0339880:CDS 50.0%
GAAGGGAAGACAAATGCCGA+TGG - chr2_4:61145976-61145995 Msa0339880:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG - chr2_4:61146083-61146102 Msa0339880:CDS 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG - chr2_4:61146148-61146167 Msa0339880:intron 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG - chr2_4:61146151-61146170 Msa0339880:intron 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG - chr2_4:61146155-61146174 Msa0339880:intron 50.0%
AGGGTATGCTTGTGCTTCAG+TGG - chr2_4:61146311-61146330 Msa0339880:intron 50.0%
TTGGATTAACAGCTGCGTCC+GGG - chr2_4:61146771-61146790 Msa0339880:intron 50.0%
! TCACTAGTCTCATCAGGCCT+TGG + chr2_4:61146879-61146898 None:intergenic 50.0%
AAGGCCTGATGAGACTAGTG+AGG - chr2_4:61146878-61146897 Msa0339880:intron 50.0%
AGGCCTGATGAGACTAGTGA+GGG - chr2_4:61146879-61146898 Msa0339880:intron 50.0%
! CGGCTGATGTCAGTACTGAA+TGG - chr2_4:61146946-61146965 Msa0339880:intron 50.0%
! TGGAGTATTATCCCTGGACG+TGG - chr2_4:61146966-61146985 Msa0339880:intron 50.0%
AGTATTATCCCTGGACGTGG+AGG - chr2_4:61146969-61146988 Msa0339880:intron 50.0%
GTATTATCCCTGGACGTGGA+GGG - chr2_4:61146970-61146989 Msa0339880:intron 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG + chr2_4:61147113-61147132 None:intergenic 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG + chr2_4:61147197-61147216 None:intergenic 50.0%
CAGCAACTTCTTCAACCCTC+AGG - chr2_4:61147195-61147214 Msa0339880:intron 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG + chr2_4:61147213-61147232 None:intergenic 50.0%
GCTGAGTCCAGTATTCACTG+GGG - chr2_4:61147427-61147446 Msa0339880:intron 50.0%
CTGAGTCCAGTATTCACTGG+GGG - chr2_4:61147428-61147447 Msa0339880:intron 50.0%
!! CCACCAATATGGGTTGATCG+CGG - chr2_4:61147470-61147489 Msa0339880:intron 50.0%
CTGTGGCGTGAAATTCTGCT+TGG + chr2_4:61147605-61147624 None:intergenic 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG - chr2_4:61147697-61147716 Msa0339880:CDS 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG - chr2_4:61147700-61147719 Msa0339880:CDS 50.0%
TCTGCACTAATTCCACCACC+AGG + chr2_4:61147715-61147734 None:intergenic 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG - chr2_4:61147715-61147734 Msa0339880:CDS 50.0%
! TGACGGATGAGATAGTCACC+TGG + chr2_4:61147858-61147877 None:intergenic 50.0%
CGCAGCTATTCGCACCATTA+CGG - chr2_4:61148517-61148536 Msa0339880:CDS 50.0%
ACGGCTGCTAAATGCTTCAG+GGG - chr2_4:61148536-61148555 Msa0339880:CDS 50.0%
GTAGATCAAGGCCTAGGCAT+TGG - chr2_4:61149233-61149252 Msa0339880:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG + chr2_4:61149262-61149281 None:intergenic 50.0%
GCCACCAACTAACTCTGACA+CGG - chr2_4:61149279-61149298 Msa0339880:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG + chr2_4:61149283-61149302 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG + chr2_4:61149310-61149329 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG - chr2_4:61149308-61149327 Msa0339880:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG - chr2_4:61149422-61149441 Msa0339880:CDS 50.0%
TCCTACCTCCAGCATGTTTC+TGG + chr2_4:61149474-61149493 None:intergenic 50.0%
CACAGCTTGCAGCTGAGTTA+CGG - chr2_4:61149578-61149597 Msa0339880:CDS 50.0%
GCAGAGCATGGGAATGATCT+AGG - chr2_4:61149634-61149653 Msa0339880:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG - chr2_4:61149691-61149710 Msa0339880:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG - chr2_4:61149721-61149740 Msa0339880:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG - chr2_4:61149726-61149745 Msa0339880:CDS 50.0%
TGCTCTGACCAAACCAAGCT+TGG + chr2_4:61149737-61149756 None:intergenic 50.0%
GGGATCATTGCAGAATCCAC+AGG - chr2_4:61150012-61150031 Msa0339880:exon 50.0%
TGAGGGGTTTGAAGACACGG+CGG + chr2_4:61145483-61145502 None:intergenic 55.0%
CGGTGAGGGGTTTGAAGACA+CGG + chr2_4:61145486-61145505 None:intergenic 55.0%
TTCCTCTACGGCAACACCAC+TGG - chr2_4:61145562-61145581 Msa0339880:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG - chr2_4:61145574-61145593 Msa0339880:CDS 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG - chr2_4:61145595-61145614 Msa0339880:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG - chr2_4:61145601-61145620 Msa0339880:CDS 55.0%
GGAAGTAATGGTGGCAGTGG+TGG - chr2_4:61145604-61145623 Msa0339880:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG - chr2_4:61145607-61145626 Msa0339880:CDS 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG - chr2_4:61145643-61145662 Msa0339880:CDS 55.0%
TTTGGAGGAGGAAACGGAGG+AGG - chr2_4:61145646-61145665 Msa0339880:CDS 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG - chr2_4:61145659-61145678 Msa0339880:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG - chr2_4:61145890-61145909 Msa0339880:intron 55.0%
TCCGGGCGGAGTTTACACAA+GGG - chr2_4:61145891-61145910 Msa0339880:intron 55.0%
! CACAAGGGCGCAACTACAGA+AGG - chr2_4:61145906-61145925 Msa0339880:CDS 55.0%
AGAGGAGGATGGAGAAGGCT+AGG - chr2_4:61146166-61146185 Msa0339880:intron 55.0%
! CCTCCCTCACTAGTCTCATC+AGG + chr2_4:61146885-61146904 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG - chr2_4:61146882-61146901 Msa0339880:intron 55.0%
TTGGATACCCTCCACGTCCA+GGG + chr2_4:61146980-61146999 None:intergenic 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG - chr2_4:61146983-61147002 Msa0339880:intron 55.0%
GTTCAGGCCTCACTTCAACC+TGG - chr2_4:61147103-61147122 Msa0339880:intron 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG + chr2_4:61147214-61147233 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG + chr2_4:61147473-61147492 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG + chr2_4:61147476-61147495 None:intergenic 55.0%
!! CCAATATGGGTTGATCGCGG+TGG - chr2_4:61147473-61147492 Msa0339880:intron 55.0%
GATCAATGCCAGTACCACCG+AGG + chr2_4:61147753-61147772 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG - chr2_4:61148537-61148556 Msa0339880:CDS 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG + chr2_4:61148869-61148888 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG - chr2_4:61148870-61148889 Msa0339880:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG + chr2_4:61148877-61148896 None:intergenic 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG + chr2_4:61148878-61148897 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG - chr2_4:61149227-61149246 Msa0339880:CDS 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG - chr2_4:61149314-61149333 Msa0339880:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG + chr2_4:61149348-61149367 None:intergenic 55.0%
CATGGAGGACAAGAACTGGC+GGG + chr2_4:61149349-61149368 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG + chr2_4:61149350-61149369 None:intergenic 55.0%
CGCCTACACAACCACCATAG+CGG + chr2_4:61149373-61149392 None:intergenic 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG - chr2_4:61149463-61149482 Msa0339880:CDS 55.0%
TGCTGCCAGAAACATGCTGG+AGG - chr2_4:61149466-61149485 Msa0339880:CDS 55.0%
GCCAGAAACATGCTGGAGGT+AGG - chr2_4:61149470-61149489 Msa0339880:CDS 55.0%
CGTAACTCAGCTGCAAGCTG+TGG + chr2_4:61149580-61149599 None:intergenic 55.0%
GTGCCGCCGAAGTTGTTGGA+TGG + chr2_4:61145382-61145401 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG + chr2_4:61145386-61145405 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG - chr2_4:61145391-61145410 Msa0339880:three_prime_UTR 60.0%
TTTGCGACGGCCGGACAAGA+TGG + chr2_4:61145404-61145423 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG + chr2_4:61145476-61145495 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG + chr2_4:61145477-61145496 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG + chr2_4:61145518-61145537 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG + chr2_4:61145530-61145549 None:intergenic 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG + chr2_4:61145567-61145586 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG - chr2_4:61145565-61145584 Msa0339880:CDS 60.0%
TACGGCAACACCACTGGTGG+TGG - chr2_4:61145568-61145587 Msa0339880:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG - chr2_4:61145577-61145596 Msa0339880:CDS 60.0%
ACCACCATGTCCACCACCAG+TGG + chr2_4:61145581-61145600 None:intergenic 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG - chr2_4:61145580-61145599 Msa0339880:CDS 60.0%
!! AATGGTGGCAGTGGTGGTGG+TGG - chr2_4:61145610-61145629 Msa0339880:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG - chr2_4:61145628-61145647 Msa0339880:CDS 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG - chr2_4:61145631-61145650 Msa0339880:CDS 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG - chr2_4:61145634-61145653 Msa0339880:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG + chr2_4:61145895-61145914 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG + chr2_4:61146981-61147000 None:intergenic 60.0%
CAGGCCTCACTTCAACCTGG+TGG - chr2_4:61147106-61147125 Msa0339880:intron 60.0%
TGGTGGCACTTCATCCAGCC+CGG + chr2_4:61147456-61147475 None:intergenic 60.0%
GATGGACCTCCTACCAGCCT+CGG - chr2_4:61147733-61147752 Msa0339880:CDS 60.0%
AATGCCAGTACCACCGAGGC+TGG + chr2_4:61147749-61147768 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG - chr2_4:61148450-61148469 Msa0339880:CDS 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG - chr2_4:61148842-61148861 Msa0339880:intron 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG - chr2_4:61148843-61148862 Msa0339880:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG + chr2_4:61148861-61148880 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG - chr2_4:61148862-61148881 Msa0339880:intron 60.0%
GGGCCAAGCAACCCAAGCAA+GGG - chr2_4:61148863-61148882 Msa0339880:intron 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG - chr2_4:61149118-61149137 Msa0339880:CDS 60.0%
GGAACTGGGTGCCAATGCCT+AGG + chr2_4:61149247-61149266 None:intergenic 60.0%
TGGAGGACAAGAACTGGCGG+GGG + chr2_4:61149347-61149366 None:intergenic 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG - chr2_4:61149347-61149366 Msa0339880:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG + chr2_4:61149353-61149372 None:intergenic 60.0%
CTTGTCCTCCATGGCCGCTA+TGG - chr2_4:61149356-61149375 Msa0339880:CDS 60.0%
AACCACCATAGCGGCCATGG+AGG + chr2_4:61149364-61149383 None:intergenic 60.0%
CACAACCACCATAGCGGCCA+TGG + chr2_4:61149367-61149386 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG - chr2_4:61149368-61149387 Msa0339880:CDS 60.0%
!! GGTGGTGGACATGGTGGTGG+TGG - chr2_4:61145583-61145602 Msa0339880:CDS 65.0%
!! GTGGTGGTGGTGGTGGAGGT+TGG - chr2_4:61145620-61145639 Msa0339880:CDS 65.0%
!! GTGGTGGTGGTGGAGGTTGG+TGG - chr2_4:61145623-61145642 Msa0339880:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG - chr2_4:61145649-61145668 Msa0339880:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG - chr2_4:61145652-61145671 Msa0339880:CDS 65.0%
CCAGTATTCACTGGGGGCCC+CGG - chr2_4:61147434-61147453 Msa0339880:intron 65.0%
CAGTATTCACTGGGGGCCCC+GGG - chr2_4:61147435-61147454 Msa0339880:intron 65.0%
GTGGCACTTCATCCAGCCCG+GGG + chr2_4:61147454-61147473 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG + chr2_4:61147455-61147474 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG + chr2_4:61147742-61147761 None:intergenic 65.0%
CCAGTACCACCGAGGCTGGT+AGG + chr2_4:61147745-61147764 None:intergenic 65.0%
CCTACCAGCCTCGGTGGTAC+TGG - chr2_4:61147742-61147761 Msa0339880:CDS 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG + chr2_4:61148857-61148876 None:intergenic 65.0%
GGCCGGCCCTAGAGACTAAG+AGG + chr2_4:61149123-61149142 None:intergenic 65.0%
AGGACAAGAACTGGCGGGGG+TGG + chr2_4:61149344-61149363 None:intergenic 65.0%
GTCCTCCATGGCCGCTATGG+TGG - chr2_4:61149359-61149378 Msa0339880:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG + chr2_4:61145472-61145491 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG + chr2_4:61145500-61145519 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG + chr2_4:61145501-61145520 None:intergenic 70.0%
GGAGGAAACGGCGACGGTGG+CGG + chr2_4:61145506-61145525 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG + chr2_4:61145512-61145531 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG + chr2_4:61145527-61145546 None:intergenic 70.0%
!! GGTGGCAGTGGTGGTGGTGG+TGG - chr2_4:61145613-61145632 Msa0339880:CDS 70.0%
!! GGCAGTGGTGGTGGTGGTGG+AGG - chr2_4:61145616-61145635 Msa0339880:CDS 70.0%
CCGGGGCCCCCAGTGAATAC+TGG + chr2_4:61147437-61147456 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG - chr2_4:61147736-61147755 Msa0339880:CDS 70.0%
! ACGGCGACGGTGGCGGTGAG+GGG + chr2_4:61145499-61145518 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG + chr2_4:61145509-61145528 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG + chr2_4:61145524-61145543 None:intergenic 75.0%
ATTCACTGGGGGCCCCGGGC+TGG - chr2_4:61147439-61147458 Msa0339880:intron 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG + chr2_4:61148851-61148870 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61145323 61150061 61145323 ID=Msa0339880;Name=Msa0339880
chr2_4 mRNA 61145323 61150061 61145323 ID=Msa0339880-mRNA-1;Parent=Msa0339880;Name=Msa0339880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=41|1|0.85|1|1|1|7|239|795
chr2_4 exon 61145323 61145801 61145323 ID=Msa0339880-mRNA-1:exon:19120;Parent=Msa0339880-mRNA-1
chr2_4 exon 61145897 61146151 61145897 ID=Msa0339880-mRNA-1:exon:19119;Parent=Msa0339880-mRNA-1
chr2_4 exon 61147526 61147774 61147526 ID=Msa0339880-mRNA-1:exon:19118;Parent=Msa0339880-mRNA-1
chr2_4 exon 61147867 61148058 61147867 ID=Msa0339880-mRNA-1:exon:19117;Parent=Msa0339880-mRNA-1
chr2_4 exon 61148168 61148275 61148168 ID=Msa0339880-mRNA-1:exon:19116;Parent=Msa0339880-mRNA-1
chr2_4 exon 61148380 61148601 61148380 ID=Msa0339880-mRNA-1:exon:19115;Parent=Msa0339880-mRNA-1
chr2_4 exon 61148899 61150061 61148899 ID=Msa0339880-mRNA-1:exon:19114;Parent=Msa0339880-mRNA-1
chr2_4 five_prime_UTR 61150021 61150061 61150021 ID=Msa0339880-mRNA-1:five_prime_utr;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61148899 61150020 61148899 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61148380 61148601 61148380 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61148168 61148275 61148168 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61147867 61148058 61147867 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61147526 61147774 61147526 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61145897 61146151 61145897 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 CDS 61145562 61145801 61145562 ID=Msa0339880-mRNA-1:cds;Parent=Msa0339880-mRNA-1
chr2_4 three_prime_UTR 61145323 61145561 61145323 ID=Msa0339880-mRNA-1:three_prime_utr;Parent=Msa0339880-mRNA-1
Gene Sequence

>Msa0339880

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATGTAAGCTGTTTCAATAGCCGAAAGCTGAGTCCAGTATTCACTGGGGGCCCCGGGCTGGATGAAGTGCCACCAATATGGGTTGATCGCGGTGGTGTCAAAGCTAATATTACAGAGAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>Msa0339880

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGSNGGSGGGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHVSCFNSRKLSPVFTGGPGLDEVPPIWVDRGGVKANITENFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF*