AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223370 MtrunA17_Chr2g0328601 88.539 794 39 5 1 755 11 791 0.0 1368
Msa0223370 MtrunA17_Chr4g0031981 73.806 691 143 1 103 755 114 804 0.0 1090
Msa0223370 MtrunA17_Chr5g0400161 88.889 72 8 0 619 690 1 72 2.62e-39 139
Msa0223370 MtrunA17_Chr2g0328911 24.174 484 294 18 293 739 286 733 1.20e-20 97.4
Msa0223370 MtrunA17_Chr1g0184291 31.156 199 110 7 550 739 165 345 2.74e-13 72.0
Msa0223370 MtrunA17_Chr2g0322151 30.968 155 92 3 590 739 200 344 1.27e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223370 AT3G46740.1 71.449 690 159 1 104 755 129 818 0.0 1060
Msa0223370 AT4G09080.1 55.663 415 125 7 381 755 1 396 1.02e-145 432
Msa0223370 AT1G35860.1 50.207 482 147 8 257 730 3 399 1.42e-145 432
Msa0223370 AT4G09080.2 55.663 415 125 7 381 755 12 407 2.37e-145 432
Msa0223370 AT4G09080.3 62.154 325 82 3 471 755 2 325 2.29e-134 400
Msa0223370 AT5G19620.1 23.171 492 299 14 293 743 269 722 2.79e-22 102
Msa0223370 AT3G44160.1 28.986 207 122 7 514 711 122 312 2.70e-13 72.8

Find 251 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2_1:+72922866 Msa0223370:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2_1:-72923454 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2_1:-72926124 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2_1:-72923138 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2_1:+72922981 Msa0223370:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2_1:-72926081 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2_1:+72923557 Msa0223370:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.263241 2_1:+72922288 Msa0223370:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2_1:+72922533 Msa0223370:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2_1:+72926440 Msa0223370:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2_1:+72922919 Msa0223370:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2_1:-72923137 None:intergenic
CTGATTGTCTTGATATTTGA+TGG 0.314401 2_1:+72926624 Msa0223370:three_prime_UTR
GGAGTATGCACATCCATATT+TGG 0.314750 2_1:+72923999 Msa0223370:CDS
TTCTTTAGTACTTGGAGAAT+TGG 0.326717 2_1:+72926572 Msa0223370:three_prime_UTR
TTATCTACACCATCCAAATA+TGG 0.337762 2_1:-72924012 None:intergenic
GTGGCAGTGGTGGTGGAGGT+TGG 0.339631 2_1:+72922280 Msa0223370:CDS
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2_1:+72926073 Msa0223370:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2_1:-72922861 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2_1:-72923840 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2_1:+72922867 Msa0223370:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2_1:+72922291 Msa0223370:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2_1:+72924272 Msa0223370:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2_1:+72922857 Msa0223370:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.368723 2_1:+72922273 Msa0223370:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2_1:+72926245 Msa0223370:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2_1:-72923015 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2_1:+72926356 Msa0223370:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2_1:+72922312 Msa0223370:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2_1:+72926287 Msa0223370:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2_1:+72922309 Msa0223370:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2_1:+72922926 Msa0223370:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2_1:+72924329 Msa0223370:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2_1:+72922808 Msa0223370:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2_1:+72922618 Msa0223370:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2_1:+72922676 Msa0223370:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2_1:+72922901 Msa0223370:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2_1:-72926257 None:intergenic
GCAGTGGTGGTGGAGGTTGG+TGG 0.409155 2_1:+72922283 Msa0223370:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2_1:+72924283 Msa0223370:CDS
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2_1:+72922300 Msa0223370:CDS
GGTGGTGGACATGGTGGTGG+TGG 0.415456 2_1:+72922249 Msa0223370:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2_1:+72922534 Msa0223370:CDS
CATGGTGGTGGTGGAAGTAA+TGG 0.420049 2_1:+72922258 Msa0223370:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2_1:-72925919 None:intergenic
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2_1:-72923531 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2_1:-72925912 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2_1:+72923450 Msa0223370:CDS
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2_1:+72922246 Msa0223370:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2_1:-72925960 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2_1:-72922187 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2_1:+72922270 Msa0223370:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2_1:+72926074 Msa0223370:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2_1:+72926231 Msa0223370:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2_1:+72922572 Msa0223370:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2_1:-72922181 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2_1:+72923425 Msa0223370:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2_1:+72924395 Msa0223370:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2_1:-72922414 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2_1:+72926362 Msa0223370:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2_1:-72923537 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2_1:-72922163 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2_1:+72922294 Msa0223370:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2_1:-72925918 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2_1:+72926379 Msa0223370:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2_1:-72926387 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2_1:+72923065 Msa0223370:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2_1:+72926009 Msa0223370:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2_1:-72923849 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2_1:+72922306 Msa0223370:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2_1:-72922222 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2_1:-72922139 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2_1:+72923978 Msa0223370:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2_1:-72926003 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2_1:+72922951 Msa0223370:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2_1:-72922067 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2_1:+72926419 Msa0223370:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2_1:+72926374 Msa0223370:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2_1:+72926096 Msa0223370:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2_1:-72922169 None:intergenic
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2_1:+72922920 Msa0223370:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2_1:-72924036 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2_1:+72923569 Msa0223370:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2_1:-72923116 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2_1:-72926017 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2_1:+72922267 Msa0223370:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2_1:+72923758 Msa0223370:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2_1:-72922223 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2_1:+72922791 Msa0223370:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2_1:+72922387 Msa0223370:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2_1:-72922162 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2_1:+72922591 Msa0223370:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2_1:-72923633 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2_1:-72922140 None:intergenic
TGGATTCTGCAATGATCCCT+TGG 0.494510 2_1:-72926661 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2_1:+72924470 Msa0223370:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2_1:-72926335 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2_1:+72926000 Msa0223370:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2_1:+72922234 Msa0223370:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2_1:-72922110 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2_1:+72922815 Msa0223370:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2_1:+72926330 Msa0223370:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2_1:+72922228 Msa0223370:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2_1:+72926086 Msa0223370:CDS
AACAGCTTACATGAAGAGTT+CGG 0.499486 2_1:-72924044 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2_1:-72922111 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2_1:+72926260 Msa0223370:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2_1:-72926080 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2_1:+72922057 Msa0223370:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2_1:+72922711 Msa0223370:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2_1:+72922886 Msa0223370:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2_1:-72922753 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2_1:+72922653 Msa0223370:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2_1:-72922049 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2_1:+72922240 Msa0223370:CDS
AATGGTGGCAGTGGTGGTGG+AGG 0.516851 2_1:+72922276 Msa0223370:CDS
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2_1:+72922619 Msa0223370:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2_1:+72924490 Msa0223370:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2_1:-72923651 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2_1:+72925874 Msa0223370:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2_1:+72922645 Msa0223370:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2_1:+72926338 Msa0223370:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2_1:+72923601 Msa0223370:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2_1:-72922149 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2_1:-72922205 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2_1:+72925886 Msa0223370:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2_1:+72926075 Msa0223370:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2_1:+72923023 Msa0223370:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2_1:+72922039 Msa0223370:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2_1:-72924399 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2_1:+72926308 Msa0223370:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2_1:-72922193 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2_1:+72926344 Msa0223370:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2_1:+72922821 Msa0223370:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2_1:-72926051 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2_1:+72922743 Msa0223370:CDS
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2_1:+72923013 Msa0223370:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2_1:-72922230 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2_1:+72923426 Msa0223370:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2_1:+72922971 Msa0223370:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2_1:-72922209 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2_1:+72926116 Msa0223370:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2_1:+72926337 Msa0223370:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2_1:-72924395 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2_1:+72922769 Msa0223370:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2_1:+72922605 Msa0223370:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2_1:+72926012 Msa0223370:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2_1:+72922826 Msa0223370:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2_1:-72922172 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2_1:+72926309 Msa0223370:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2_1:+72924386 Msa0223370:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2_1:+72925880 Msa0223370:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2_1:+72923638 Msa0223370:CDS
TGGAAATCTTAATACCAAAG+AGG 0.562046 2_1:+72923001 Msa0223370:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2_1:-72922199 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2_1:-72922103 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2_1:-72922102 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2_1:-72922552 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2_1:+72923080 Msa0223370:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2_1:-72925897 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2_1:-72925999 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2_1:+72925954 Msa0223370:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2_1:+72922566 Msa0223370:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2_1:-72922357 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2_1:+72922550 Msa0223370:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2_1:-72922135 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2_1:+72923815 Msa0223370:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2_1:-72922175 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2_1:+72923850 Msa0223370:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2_1:-72922028 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2_1:+72922811 Msa0223370:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2_1:+72923794 Msa0223370:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2_1:-72922849 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2_1:-72922652 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2_1:+72922796 Msa0223370:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2_1:+72923514 Msa0223370:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2_1:-72923632 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2_1:+72923615 Msa0223370:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2_1:+72925961 Msa0223370:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2_1:+72923124 Msa0223370:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2_1:+72922303 Msa0223370:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2_1:+72922231 Msa0223370:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2_1:+72925967 Msa0223370:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2_1:-72922164 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2_1:+72922677 Msa0223370:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2_1:+72923621 Msa0223370:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2_1:-72922868 None:intergenic
GGGATCATTGCAGAATCCAC+AGG 0.594493 2_1:+72926665 Msa0223370:three_prime_UTR
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2_1:-72922190 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2_1:+72922764 Msa0223370:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2_1:-72925911 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2_1:+72926021 Msa0223370:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2_1:+72926087 Msa0223370:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2_1:-72925997 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2_1:-72925933 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2_1:+72924368 Msa0223370:CDS
TATGGTGTCAGTTGTTCCTG+TGG 0.600323 2_1:-72926681 None:intergenic
TGGTACTGGCATTGATCACA+TGG 0.604743 2_1:+72924409 Msa0223370:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2_1:+72924003 Msa0223370:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2_1:+72922797 Msa0223370:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2_1:+72924353 Msa0223370:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2_1:-72922045 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2_1:-72925936 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2_1:-72926334 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2_1:-72922741 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2_1:-72924392 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2_1:+72922877 Msa0223370:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2_1:-72925998 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2_1:+72923625 Msa0223370:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2_1:-72922244 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2_1:+72922243 Msa0223370:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2_1:+72923581 Msa0223370:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2_1:+72923624 Msa0223370:CDS
CCATGGAGGACAAGAACTGG+CGG 0.627462 2_1:-72926000 None:intergenic
CTACTAGTCTAGTATTAGCA+CGG 0.628634 2_1:-72926542 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2_1:+72926298 Msa0223370:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2_1:+72922952 Msa0223370:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2_1:+72925957 Msa0223370:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2_1:+72923534 Msa0223370:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2_1:+72922636 Msa0223370:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2_1:+72926413 Msa0223370:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2_1:-72923115 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2_1:+72922770 Msa0223370:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2_1:+72922937 Msa0223370:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2_1:+72924308 Msa0223370:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2_1:+72923761 Msa0223370:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2_1:-72923444 None:intergenic
GGTGGTGGTGGAAGTAATGG+TGG 0.642772 2_1:+72922261 Msa0223370:CDS
ACACCTTTAATATTGAAGCA+GGG 0.649166 2_1:+72923451 Msa0223370:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2_1:+72922680 Msa0223370:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2_1:-72926417 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2_1:-72923776 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2_1:+72923533 Msa0223370:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2_1:+72923537 Msa0223370:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2_1:+72922429 Msa0223370:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2_1:+72922042 Msa0223370:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2_1:-72923765 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2_1:+72925932 Msa0223370:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2_1:+72924347 Msa0223370:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2_1:+72922551 Msa0223370:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2_1:-72926023 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2_1:-72926014 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2_1:-72924365 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2_1:+72924389 Msa0223370:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2_1:+72922537 Msa0223370:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2_1:-72924272 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2_1:+72924350 Msa0223370:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2_1:+72926119 Msa0223370:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2_1:-72924403 None:intergenic
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2_1:-72922146 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2_1:-72923114 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2_1:72925726-72925745 Msa0223370:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2_1:72925699-72925718 None:intergenic 10.0%
!!! GTTTTTAAATTACATTTTTT+TGG + chr2_1:72926507-72926526 Msa0223370:three_prime_UTR 10.0%
!! ATATTATATTATACCTCTTT+GGG - chr2_1:72923140-72923159 None:intergenic 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2_1:72923141-72923160 None:intergenic 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2_1:72924191-72924210 Msa0223370:intron 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2_1:72925326-72925345 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2_1:72925575-72925594 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG + chr2_1:72925635-72925654 Msa0223370:intron 15.0%
!!! CTAAAACAAAATTTTTAATG+TGG - chr2_1:72925752-72925771 None:intergenic 15.0%
!!! CACATTAAAAATTTTGTTTT+AGG + chr2_1:72925750-72925769 Msa0223370:intron 15.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2_1:72922417-72922436 None:intergenic 20.0%
!! TTGTTATCTGTTGTATATAT+GGG + chr2_1:72923191-72923210 Msa0223370:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2_1:72923924-72923943 Msa0223370:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2_1:72924572-72924591 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2_1:72924570-72924589 Msa0223370:intron 20.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2_1:72924606-72924625 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2_1:72924625-72924644 None:intergenic 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2_1:72924625-72924644 Msa0223370:intron 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2_1:72924632-72924651 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2_1:72924758-72924777 None:intergenic 20.0%
!! TTGAAATGAAAGAACATTTA+GGG - chr2_1:72924831-72924850 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG - chr2_1:72924832-72924851 None:intergenic 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2_1:72925549-72925568 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2_1:72925549-72925568 Msa0223370:intron 20.0%
!!! TTACATTTTTTTGGTTTAAG+TGG + chr2_1:72926516-72926535 Msa0223370:three_prime_UTR 20.0%
!!! TACATTTTTTTGGTTTAAGT+GGG + chr2_1:72926517-72926536 Msa0223370:three_prime_UTR 20.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2_1:72922533-72922552 Msa0223370:CDS 25.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2_1:72922711-72922730 Msa0223370:CDS 25.0%
! GTTGTTATCTGTTGTATATA+TGG + chr2_1:72923190-72923209 Msa0223370:intron 25.0%
! TCTTATTGTTGTCAATTTAG+AGG + chr2_1:72923227-72923246 Msa0223370:intron 25.0%
! CTTATTGTTGTCAATTTAGA+GGG + chr2_1:72923228-72923247 Msa0223370:intron 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2_1:72923305-72923324 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2_1:72923503-72923522 Msa0223370:CDS 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2_1:72923557-72923576 Msa0223370:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2_1:72923569-72923588 Msa0223370:CDS 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2_1:72923742-72923761 Msa0223370:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2_1:72924737-72924756 None:intergenic 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2_1:72924889-72924908 None:intergenic 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2_1:72925001-72925020 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2_1:72924999-72925018 Msa0223370:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2_1:72925150-72925169 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2_1:72925569-72925588 Msa0223370:intron 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2_1:72925797-72925816 None:intergenic 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2_1:72925798-72925817 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2_1:72925864-72925883 Msa0223370:intron 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2_1:72926158-72926177 None:intergenic 25.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2_1:72922387-72922406 Msa0223370:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2_1:72922429-72922448 Msa0223370:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2_1:72922492-72922511 Msa0223370:CDS 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2_1:72922534-72922553 Msa0223370:CDS 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2_1:72922605-72922624 Msa0223370:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2_1:72922618-72922637 Msa0223370:CDS 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2_1:72922619-72922638 Msa0223370:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2_1:72922676-72922695 Msa0223370:CDS 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2_1:72922677-72922696 Msa0223370:CDS 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2_1:72922756-72922775 None:intergenic 30.0%
TGGAAATCTTAATACCAAAG+AGG + chr2_1:72923001-72923020 Msa0223370:CDS 30.0%
TTATCTGTTGTATATATGGG+AGG + chr2_1:72923194-72923213 Msa0223370:intron 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2_1:72923309-72923328 Msa0223370:intron 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2_1:72923316-72923335 Msa0223370:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2_1:72923373-72923392 Msa0223370:intron 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2_1:72923381-72923400 None:intergenic 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2_1:72923447-72923466 None:intergenic 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2_1:72923450-72923469 Msa0223370:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2_1:72923451-72923470 Msa0223370:CDS 30.0%
GAAAAAAAAAAATCCCTTGG+TGG - chr2_1:72923703-72923722 None:intergenic 30.0%
GCAGAAAAAAAAAAATCCCT+TGG - chr2_1:72923706-72923725 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2_1:72923783-72923802 Msa0223370:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2_1:72924015-72924034 None:intergenic 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2_1:72924149-72924168 Msa0223370:intron 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2_1:72924198-72924217 Msa0223370:intron 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2_1:72924283-72924302 Msa0223370:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2_1:72924329-72924348 Msa0223370:CDS 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2_1:72924528-72924547 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2_1:72924536-72924555 Msa0223370:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2_1:72924655-72924674 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2_1:72924792-72924811 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2_1:72924850-72924869 Msa0223370:intron 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2_1:72924858-72924877 None:intergenic 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2_1:72925025-72925044 Msa0223370:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2_1:72925371-72925390 Msa0223370:intron 30.0%
AATGTTTAGTTAGAGCTCAA+TGG - chr2_1:72925416-72925435 None:intergenic 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2_1:72925483-72925502 Msa0223370:intron 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2_1:72925484-72925503 Msa0223370:intron 30.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2_1:72925651-72925670 Msa0223370:intron 30.0%
!! TAATCAGAAAGTATTGTCAC+AGG - chr2_1:72925839-72925858 None:intergenic 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2_1:72926054-72926073 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2_1:72926054-72926073 Msa0223370:CDS 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2_1:72926440-72926459 Msa0223370:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2_1:72926447-72926466 Msa0223370:CDS 30.0%
!! GACTTGTTTTCTTTAGTACT+TGG + chr2_1:72926564-72926583 Msa0223370:three_prime_UTR 30.0%
TTCTTTAGTACTTGGAGAAT+TGG + chr2_1:72926572-72926591 Msa0223370:three_prime_UTR 30.0%
CTGATTGTCTTGATATTTGA+TGG + chr2_1:72926624-72926643 Msa0223370:three_prime_UTR 30.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG - chr2_1:72922083-72922102 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2_1:72922338-72922357 Msa0223370:CDS 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2_1:72922591-72922610 Msa0223370:CDS 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2_1:72922864-72922883 None:intergenic 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2_1:72922866-72922885 Msa0223370:CDS 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2_1:72922867-72922886 Msa0223370:CDS 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2_1:72922871-72922890 None:intergenic 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2_1:72922920-72922939 Msa0223370:CDS 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2_1:72922952-72922971 Msa0223370:CDS 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2_1:72922981-72923000 Msa0223370:CDS 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2_1:72923065-72923084 Msa0223370:CDS 35.0%
TGTATATATGGGAGGTTCAT+AGG + chr2_1:72923202-72923221 Msa0223370:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2_1:72923317-72923336 Msa0223370:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2_1:72923394-72923413 Msa0223370:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2_1:72923407-72923426 Msa0223370:intron 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2_1:72923457-72923476 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2_1:72923514-72923533 Msa0223370:CDS 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2_1:72923581-72923600 Msa0223370:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2_1:72923686-72923705 Msa0223370:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2_1:72923687-72923706 Msa0223370:intron 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2_1:72923779-72923798 None:intergenic 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2_1:72923957-72923976 Msa0223370:intron 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2_1:72923978-72923997 Msa0223370:intron 35.0%
TATGCACATCCATATTTGGA+TGG + chr2_1:72924003-72924022 Msa0223370:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2_1:72924047-72924066 None:intergenic 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2_1:72924275-72924294 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2_1:72924272-72924291 Msa0223370:CDS 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2_1:72924458-72924477 Msa0223370:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2_1:72924873-72924892 Msa0223370:intron 35.0%
AAAAAATAGTCCATCAACGG+AGG - chr2_1:72924886-72924905 None:intergenic 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2_1:72924982-72925001 Msa0223370:intron 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2_1:72925033-72925052 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2_1:72925036-72925055 Msa0223370:intron 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2_1:72925037-72925056 Msa0223370:intron 35.0%
TAGTCTATAGTGTGCTATAG+CGG + chr2_1:72925084-72925103 Msa0223370:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2_1:72925374-72925393 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2_1:72925380-72925399 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2_1:72925379-72925398 Msa0223370:intron 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2_1:72925437-72925456 Msa0223370:intron 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2_1:72925477-72925496 None:intergenic 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2_1:72925793-72925812 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2_1:72926057-72926076 Msa0223370:CDS 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2_1:72926083-72926102 None:intergenic 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2_1:72926084-72926103 None:intergenic 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2_1:72926298-72926317 Msa0223370:CDS 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2_1:72926309-72926328 Msa0223370:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2_1:72926420-72926439 None:intergenic 35.0%
! CTACTAGTCTAGTATTAGCA+CGG - chr2_1:72926545-72926564 None:intergenic 35.0%
!!! TGGTTTTTATTTTTGCGCCA+AGG + chr2_1:72926644-72926663 Msa0223370:three_prime_UTR 35.0%
!!! GGTTTTTATTTTTGCGCCAA+GGG + chr2_1:72926645-72926664 Msa0223370:three_prime_UTR 35.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2_1:72922216-72922235 Msa0223370:CDS 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2_1:72922537-72922556 Msa0223370:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2_1:72922680-72922699 Msa0223370:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2_1:72922764-72922783 Msa0223370:CDS 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2_1:72922770-72922789 Msa0223370:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2_1:72922791-72922810 Msa0223370:CDS 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2_1:72922796-72922815 Msa0223370:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2_1:72922797-72922816 Msa0223370:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2_1:72922852-72922871 None:intergenic 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2_1:72922857-72922876 Msa0223370:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2_1:72922877-72922896 Msa0223370:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2_1:72922886-72922905 Msa0223370:CDS 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2_1:72922901-72922920 Msa0223370:CDS 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2_1:72922919-72922938 Msa0223370:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2_1:72922926-72922945 Msa0223370:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2_1:72922937-72922956 Msa0223370:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2_1:72922951-72922970 Msa0223370:CDS 40.0%
TACCAAAGAGGTTGTTTGTG+AGG + chr2_1:72923013-72923032 Msa0223370:CDS 40.0%
AACCTCACAAACAACCTCTT+TGG - chr2_1:72923018-72923037 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2_1:72923023-72923042 Msa0223370:CDS 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2_1:72923080-72923099 Msa0223370:CDS 40.0%
AAGCTCTCTATGTATCACAG+GGG - chr2_1:72923117-72923136 None:intergenic 40.0%
GAAGCTCTCTATGTATCACA+GGG - chr2_1:72923118-72923137 None:intergenic 40.0%
AACAACCCGATATCCTAAAC+AGG - chr2_1:72923325-72923344 None:intergenic 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2_1:72923615-72923634 Msa0223370:CDS 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2_1:72923654-72923673 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2_1:72923843-72923862 None:intergenic 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2_1:72923886-72923905 None:intergenic 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2_1:72923963-72923982 None:intergenic 40.0%
GGAGTATGCACATCCATATT+TGG + chr2_1:72923999-72924018 Msa0223370:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2_1:72924077-72924096 None:intergenic 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2_1:72924347-72924366 Msa0223370:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2_1:72924470-72924489 Msa0223370:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2_1:72924800-72924819 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2_1:72924869-72924888 None:intergenic 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2_1:72925488-72925507 Msa0223370:intron 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2_1:72925766-72925785 Msa0223370:intron 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2_1:72925767-72925786 Msa0223370:intron 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2_1:72925939-72925958 None:intergenic 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2_1:72925954-72925973 Msa0223370:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2_1:72926086-72926105 Msa0223370:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2_1:72926087-72926106 Msa0223370:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2_1:72926245-72926264 Msa0223370:CDS 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2_1:72926260-72926279 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2_1:72926260-72926279 Msa0223370:CDS 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2_1:72926276-72926295 Msa0223370:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2_1:72926308-72926327 Msa0223370:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2_1:72926337-72926356 None:intergenic 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2_1:72926338-72926357 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2_1:72926337-72926356 Msa0223370:CDS 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2_1:72926338-72926357 Msa0223370:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2_1:72926356-72926375 Msa0223370:CDS 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2_1:72926362-72926381 Msa0223370:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2_1:72926413-72926432 Msa0223370:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2_1:72926419-72926438 Msa0223370:CDS 40.0%
CTCGTTCCATCCAACAACTT+CGG + chr2_1:72922039-72922058 Msa0223370:CDS 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2_1:72922105-72922124 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2_1:72922113-72922132 None:intergenic 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2_1:72922114-72922133 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2_1:72922202-72922221 None:intergenic 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2_1:72922208-72922227 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2_1:72922212-72922231 None:intergenic 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2_1:72922645-72922664 Msa0223370:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2_1:72922655-72922674 None:intergenic 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2_1:72922653-72922672 Msa0223370:CDS 45.0%
! AACTCAATCGGCTTTGTCTG+CGG - chr2_1:72922744-72922763 None:intergenic 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2_1:72922769-72922788 Msa0223370:CDS 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2_1:72922821-72922840 Msa0223370:CDS 45.0%
GGAAGCTCTCTATGTATCAC+AGG - chr2_1:72923119-72923138 None:intergenic 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2_1:72923124-72923143 Msa0223370:CDS 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2_1:72923425-72923444 Msa0223370:intron 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2_1:72923794-72923813 Msa0223370:CDS 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2_1:72923815-72923834 Msa0223370:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2_1:72924039-72924058 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2_1:72924078-72924097 Msa0223370:intron 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2_1:72924079-72924098 Msa0223370:intron 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2_1:72924112-72924131 Msa0223370:intron 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2_1:72924113-72924132 Msa0223370:intron 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2_1:72924308-72924327 Msa0223370:CDS 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2_1:72924409-72924428 Msa0223370:CDS 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2_1:72924490-72924509 Msa0223370:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2_1:72925043-72925062 Msa0223370:intron 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2_1:72925049-72925068 Msa0223370:intron 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2_1:72925187-72925206 None:intergenic 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2_1:72925187-72925206 Msa0223370:intron 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2_1:72925188-72925207 Msa0223370:intron 45.0%
TCCAACTTGCACTACCTTTG+AGG + chr2_1:72925460-72925479 Msa0223370:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG - chr2_1:72925464-72925483 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2_1:72925874-72925893 Msa0223370:intron 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2_1:72925914-72925933 None:intergenic 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2_1:72925921-72925940 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2_1:72925922-72925941 None:intergenic 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2_1:72925957-72925976 Msa0223370:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2_1:72926073-72926092 Msa0223370:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2_1:72926074-72926093 Msa0223370:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2_1:72926096-72926115 Msa0223370:CDS 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2_1:72926275-72926294 Msa0223370:CDS 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2_1:72926330-72926349 Msa0223370:CDS 45.0%
TGGATTCTGCAATGATCCCT+TGG - chr2_1:72926664-72926683 None:intergenic 45.0%
! TATGGTGTCAGTTGTTCCTG+TGG - chr2_1:72926684-72926703 None:intergenic 45.0%
GGATGGAACGAGAGAAGACA+TGG - chr2_1:72922031-72922050 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2_1:72922042-72922061 Msa0223370:CDS 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG - chr2_1:72922079-72922098 None:intergenic 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2_1:72922106-72922125 None:intergenic 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2_1:72922225-72922244 None:intergenic 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2_1:72922226-72922245 None:intergenic 50.0%
!! CATGGTGGTGGTGGAAGTAA+TGG + chr2_1:72922258-72922277 Msa0223370:CDS 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2_1:72922300-72922319 Msa0223370:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2_1:72922325-72922344 Msa0223370:CDS 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2_1:72922360-72922379 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2_1:72922572-72922591 Msa0223370:CDS 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2_1:72922636-72922655 Msa0223370:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG + chr2_1:72922743-72922762 Msa0223370:CDS 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2_1:72922808-72922827 Msa0223370:CDS 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2_1:72922811-72922830 Msa0223370:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2_1:72922815-72922834 Msa0223370:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2_1:72922971-72922990 Msa0223370:CDS 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2_1:72923426-72923445 Msa0223370:intron 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2_1:72923534-72923553 None:intergenic 50.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2_1:72923533-72923552 Msa0223370:CDS 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2_1:72923534-72923553 Msa0223370:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2_1:72923601-72923620 Msa0223370:CDS 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2_1:72923621-72923640 Msa0223370:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2_1:72923624-72923643 Msa0223370:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2_1:72923625-72923644 Msa0223370:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2_1:72923768-72923787 None:intergenic 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2_1:72923852-72923871 None:intergenic 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2_1:72923850-72923869 Msa0223370:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2_1:72923868-72923887 None:intergenic 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2_1:72924080-72924099 Msa0223370:intron 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2_1:72924081-72924100 Msa0223370:intron 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2_1:72924123-72924142 Msa0223370:intron 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2_1:72924258-72924277 None:intergenic 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2_1:72924350-72924369 Msa0223370:CDS 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2_1:72924353-72924372 Msa0223370:CDS 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2_1:72924368-72924387 None:intergenic 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2_1:72924368-72924387 Msa0223370:CDS 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2_1:72924511-72924530 None:intergenic 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2_1:72925170-72925189 Msa0223370:intron 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2_1:72925189-72925208 Msa0223370:intron 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2_1:72925886-72925905 Msa0223370:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2_1:72925915-72925934 None:intergenic 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2_1:72925932-72925951 Msa0223370:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2_1:72925936-72925955 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2_1:72925963-72925982 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2_1:72925961-72925980 Msa0223370:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2_1:72926075-72926094 Msa0223370:CDS 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2_1:72926127-72926146 None:intergenic 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2_1:72926231-72926250 Msa0223370:intron 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2_1:72926287-72926306 Msa0223370:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2_1:72926344-72926363 Msa0223370:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2_1:72926374-72926393 Msa0223370:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2_1:72926379-72926398 Msa0223370:CDS 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2_1:72926390-72926409 None:intergenic 50.0%
GGGATCATTGCAGAATCCAC+AGG + chr2_1:72926665-72926684 Msa0223370:three_prime_UTR 50.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2_1:72922149-72922168 None:intergenic 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2_1:72922152-72922171 None:intergenic 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2_1:72922228-72922247 Msa0223370:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2_1:72922240-72922259 Msa0223370:CDS 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2_1:72922261-72922280 Msa0223370:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2_1:72922267-72922286 Msa0223370:CDS 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2_1:72922270-72922289 Msa0223370:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2_1:72922273-72922292 Msa0223370:CDS 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2_1:72922303-72922322 Msa0223370:CDS 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2_1:72922306-72922325 Msa0223370:CDS 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2_1:72922319-72922338 Msa0223370:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2_1:72922550-72922569 Msa0223370:CDS 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2_1:72922551-72922570 Msa0223370:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2_1:72922566-72922585 Msa0223370:CDS 55.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2_1:72922826-72922845 Msa0223370:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2_1:72923540-72923559 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2_1:72923537-72923556 Msa0223370:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2_1:72923635-72923654 None:intergenic 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2_1:72923638-72923657 Msa0223370:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2_1:72923758-72923777 Msa0223370:intron 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2_1:72923869-72923888 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2_1:72924126-72924145 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2_1:72924129-72924148 None:intergenic 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2_1:72924126-72924145 Msa0223370:intron 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2_1:72924406-72924425 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2_1:72925190-72925209 Msa0223370:intron 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2_1:72925522-72925541 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2_1:72925523-72925542 Msa0223370:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2_1:72925530-72925549 None:intergenic 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2_1:72925531-72925550 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2_1:72925880-72925899 Msa0223370:intron 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2_1:72925967-72925986 Msa0223370:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG - chr2_1:72926001-72926020 None:intergenic 55.0%
CATGGAGGACAAGAACTGGC+GGG - chr2_1:72926002-72926021 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG - chr2_1:72926003-72926022 None:intergenic 55.0%
CGCCTACACAACCACCATAG+CGG - chr2_1:72926026-72926045 None:intergenic 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2_1:72926116-72926135 Msa0223370:CDS 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2_1:72926119-72926138 Msa0223370:CDS 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2_1:72926123-72926142 Msa0223370:intron 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2_1:72926233-72926252 None:intergenic 55.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2_1:72922048-72922067 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2_1:72922052-72922071 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG + chr2_1:72922057-72922076 Msa0223370:CDS 60.0%
TTTGCGACGGCCGGACAAGA+TGG - chr2_1:72922070-72922089 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2_1:72922142-72922161 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2_1:72922143-72922162 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2_1:72922184-72922203 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2_1:72922196-72922215 None:intergenic 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2_1:72922233-72922252 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2_1:72922231-72922250 Msa0223370:CDS 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2_1:72922234-72922253 Msa0223370:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2_1:72922243-72922262 Msa0223370:CDS 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2_1:72922247-72922266 None:intergenic 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2_1:72922246-72922265 Msa0223370:CDS 60.0%
!! AATGGTGGCAGTGGTGGTGG+AGG + chr2_1:72922276-72922295 Msa0223370:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG + chr2_1:72922288-72922307 Msa0223370:CDS 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG + chr2_1:72922291-72922310 Msa0223370:CDS 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG + chr2_1:72922294-72922313 Msa0223370:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2_1:72922555-72922574 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2_1:72923636-72923655 None:intergenic 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2_1:72923761-72923780 Msa0223370:intron 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2_1:72924109-72924128 None:intergenic 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2_1:72924386-72924405 Msa0223370:CDS 60.0%
AATGCCAGTACCACCGAGGC+TGG - chr2_1:72924402-72924421 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2_1:72925103-72925122 Msa0223370:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2_1:72925495-72925514 Msa0223370:intron 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2_1:72925496-72925515 Msa0223370:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2_1:72925514-72925533 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2_1:72925515-72925534 Msa0223370:intron 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2_1:72925516-72925535 Msa0223370:intron 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2_1:72925771-72925790 Msa0223370:intron 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2_1:72925900-72925919 None:intergenic 60.0%
TGGAGGACAAGAACTGGCGG+GGG - chr2_1:72926000-72926019 None:intergenic 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG + chr2_1:72926000-72926019 Msa0223370:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG - chr2_1:72926006-72926025 None:intergenic 60.0%
CTTGTCCTCCATGGCCGCTA+TGG + chr2_1:72926009-72926028 Msa0223370:CDS 60.0%
AACCACCATAGCGGCCATGG+AGG - chr2_1:72926017-72926036 None:intergenic 60.0%
CACAACCACCATAGCGGCCA+TGG - chr2_1:72926020-72926039 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG + chr2_1:72926021-72926040 Msa0223370:CDS 60.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2_1:72922249-72922268 Msa0223370:CDS 65.0%
!! GTGGCAGTGGTGGTGGAGGT+TGG + chr2_1:72922280-72922299 Msa0223370:CDS 65.0%
!! GCAGTGGTGGTGGAGGTTGG+TGG + chr2_1:72922283-72922302 Msa0223370:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2_1:72922309-72922328 Msa0223370:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2_1:72922312-72922331 Msa0223370:CDS 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2_1:72924087-72924106 Msa0223370:intron 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2_1:72924088-72924107 Msa0223370:intron 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2_1:72924107-72924126 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2_1:72924108-72924127 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2_1:72924395-72924414 None:intergenic 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2_1:72924398-72924417 None:intergenic 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2_1:72924395-72924414 Msa0223370:CDS 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2_1:72925510-72925529 None:intergenic 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2_1:72925776-72925795 None:intergenic 65.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2_1:72925997-72926016 None:intergenic 65.0%
GTCCTCCATGGCCGCTATGG+TGG + chr2_1:72926012-72926031 Msa0223370:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2_1:72922138-72922157 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2_1:72922166-72922185 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2_1:72922167-72922186 None:intergenic 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2_1:72922172-72922191 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2_1:72922178-72922197 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2_1:72922193-72922212 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2_1:72924090-72924109 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2_1:72924389-72924408 Msa0223370:CDS 70.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2_1:72922165-72922184 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2_1:72922175-72922194 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2_1:72922190-72922209 None:intergenic 75.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2_1:72924092-72924111 Msa0223370:intron 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2_1:72925504-72925523 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72921989 72926714 72921989 ID=Msa0223370;Name=Msa0223370
chr2_1 mRNA 72921989 72926714 72921989 ID=Msa0223370-mRNA-1;Parent=Msa0223370;Name=Msa0223370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=41|0.83|0.71|1|1|1|7|239|755
chr2_1 exon 72921989 72923145 72921989 ID=Msa0223370-mRNA-1:exon:21206;Parent=Msa0223370-mRNA-1
chr2_1 exon 72923438 72923659 72923438 ID=Msa0223370-mRNA-1:exon:21207;Parent=Msa0223370-mRNA-1
chr2_1 exon 72923764 72923871 72923764 ID=Msa0223370-mRNA-1:exon:21208;Parent=Msa0223370-mRNA-1
chr2_1 exon 72923979 72924056 72923979 ID=Msa0223370-mRNA-1:exon:21209;Parent=Msa0223370-mRNA-1
chr2_1 exon 72924263 72924511 72924263 ID=Msa0223370-mRNA-1:exon:21210;Parent=Msa0223370-mRNA-1
chr2_1 exon 72925886 72926140 72925886 ID=Msa0223370-mRNA-1:exon:21211;Parent=Msa0223370-mRNA-1
chr2_1 exon 72926236 72926714 72926236 ID=Msa0223370-mRNA-1:exon:21212;Parent=Msa0223370-mRNA-1
chr2_1 five_prime_UTR 72921989 72922029 72921989 ID=Msa0223370-mRNA-1:five_prime_utr;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72922030 72923145 72922030 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72923438 72923659 72923438 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72923764 72923871 72923764 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72923979 72924056 72923979 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72924263 72924511 72924263 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72925886 72926140 72925886 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 CDS 72926236 72926475 72926236 ID=Msa0223370-mRNA-1:cds;Parent=Msa0223370-mRNA-1
chr2_1 three_prime_UTR 72926476 72926714 72926476 ID=Msa0223370-mRNA-1:three_prime_utr;Parent=Msa0223370-mRNA-1
Gene Sequence

>Msa0223370

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>Msa0223370

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHNFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF*