Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315380 | XP_003593934.1 | 93.125 | 640 | 12 | 2 | 1 | 617 | 1 | 631 | 0.0 | 1217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315380 | sp|Q93Y37|MNS3_ARATH | 66.928 | 638 | 168 | 6 | 1 | 613 | 1 | 620 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015670 | Msa0315380 | 0.833200 | 6.113293e-56 | -8.615850e-47 |
| Msa0028340 | Msa0315380 | 0.826820 | 2.199703e-54 | -8.615850e-47 |
| Msa0076170 | Msa0315380 | 0.830122 | 3.508113e-55 | -8.615850e-47 |
| Msa0089980 | Msa0315380 | 0.819888 | 9.169148e-53 | -8.615850e-47 |
| Msa0090010 | Msa0315380 | 0.819241 | 1.287543e-52 | -8.615850e-47 |
| Msa0106620 | Msa0315380 | 0.811683 | 6.191569e-51 | -8.615850e-47 |
| Msa0112270 | Msa0315380 | 0.817090 | 3.948808e-52 | -8.615850e-47 |
| Msa0124200 | Msa0315380 | 0.830827 | 2.358095e-55 | -8.615850e-47 |
| Msa0158240 | Msa0315380 | 0.809803 | 1.579477e-50 | -8.615850e-47 |
| Msa0168570 | Msa0315380 | 0.839043 | 2.006521e-57 | -8.615850e-47 |
| Msa0194860 | Msa0315380 | 0.895081 | 1.344531e-75 | -8.615850e-47 |
| Msa0194890 | Msa0315380 | 0.878845 | 2.018793e-69 | -8.615850e-47 |
| Msa0269560 | Msa0315380 | 0.802714 | 4.921887e-49 | -8.615850e-47 |
| Msa0305330 | Msa0315380 | 0.809051 | 2.290649e-50 | -8.615850e-47 |
| Msa0312530 | Msa0315380 | 0.804302 | 2.305747e-49 | -8.615850e-47 |
| Msa0315380 | Msa0379610 | 0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0315380 | Msa0408340 | 0.817705 | 2.870410e-52 | -8.615850e-47 |
| Msa0315380 | Msa0572750 | 0.828894 | 6.974977e-55 | -8.615850e-47 |
| Msa0315380 | Msa0626460 | 0.802853 | 4.605411e-49 | -8.615850e-47 |
| Msa0315380 | Msa0664540 | 0.811527 | 6.695046e-51 | -8.615850e-47 |
| Msa0315380 | Msa0689760 | 0.824267 | 8.855902e-54 | -8.615850e-47 |
| Msa0315380 | Msa0691340 | 0.812593 | 3.921718e-51 | -8.615850e-47 |
| Msa0315380 | Msa0716860 | 0.813656 | 2.292263e-51 | -8.615850e-47 |
| Msa0315380 | Msa0738240 | 0.811384 | 7.191109e-51 | -8.615850e-47 |
| Msa0315380 | Msa0865970 | 0.809119 | 2.214684e-50 | -8.615850e-47 |
| Msa0315380 | Msa0866070 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa0315380 | Msa1043120 | 0.811691 | 6.167952e-51 | -8.615850e-47 |
| Msa0315380 | Msa1043330 | 0.800661 | 1.298161e-48 | -8.615850e-47 |
| Msa0315380 | Msa1354200 | 0.868404 | 6.694501e-66 | -8.615850e-47 |
| Msa0315380 | Msa1366550 | 0.813157 | 2.950337e-51 | -8.615850e-47 |
| Msa0315380 | Msa1393820 | 0.805620 | 1.222279e-49 | -8.615850e-47 |
| Msa0315380 | Msa1420250 | 0.818825 | 1.601683e-52 | -8.615850e-47 |
| Msa0315380 | Msa1430550 | 0.821641 | 3.624775e-53 | -8.615850e-47 |
| Msa0315380 | Msa1440900 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0315380 | Msa1463030 | 0.823946 | 1.053496e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315380 | MtrunA17_Chr2g0286021 | 93.125 | 640 | 12 | 2 | 1 | 617 | 1 | 631 | 0.0 | 1217 |
| Msa0315380 | MtrunA17_Chr4g0002301 | 40.891 | 516 | 233 | 17 | 114 | 613 | 87 | 546 | 2.67e-102 | 322 |
| Msa0315380 | MtrunA17_Chr0c31g0494131 | 39.610 | 462 | 218 | 12 | 163 | 613 | 6 | 417 | 1.09e-87 | 280 |
| Msa0315380 | MtrunA17_Chr4g0071731 | 42.308 | 286 | 144 | 6 | 134 | 417 | 111 | 377 | 1.27e-60 | 208 |
| Msa0315380 | MtrunA17_Chr4g0059431 | 28.629 | 496 | 292 | 14 | 138 | 613 | 39 | 492 | 3.28e-40 | 155 |
| Msa0315380 | MtrunA17_Chr1g0187981 | 35.448 | 268 | 160 | 8 | 137 | 403 | 48 | 303 | 3.24e-31 | 129 |
| Msa0315380 | MtrunA17_Chr4g0071721 | 37.563 | 197 | 66 | 6 | 445 | 613 | 2 | 169 | 1.44e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315380 | AT1G30000.1 | 66.928 | 638 | 168 | 6 | 1 | 613 | 1 | 620 | 0.0 | 843 |
| Msa0315380 | AT1G30000.2 | 65.968 | 620 | 168 | 6 | 19 | 613 | 39 | 640 | 0.0 | 808 |
| Msa0315380 | AT1G51590.1 | 42.566 | 491 | 218 | 14 | 136 | 613 | 97 | 536 | 6.74e-105 | 328 |
| Msa0315380 | AT3G21160.1 | 41.548 | 491 | 223 | 13 | 136 | 613 | 98 | 537 | 1.23e-102 | 323 |
| Msa0315380 | AT1G51590.2 | 41.788 | 481 | 216 | 14 | 146 | 613 | 3 | 432 | 7.55e-101 | 315 |
| Msa0315380 | AT3G21160.2 | 42.958 | 284 | 141 | 6 | 136 | 417 | 98 | 362 | 1.31e-60 | 207 |
| Msa0315380 | AT5G43710.3 | 35.094 | 265 | 156 | 8 | 137 | 397 | 41 | 293 | 5.13e-31 | 128 |
| Msa0315380 | AT5G43710.2 | 35.094 | 265 | 156 | 8 | 137 | 397 | 41 | 293 | 5.24e-31 | 128 |
| Msa0315380 | AT5G43710.1 | 35.094 | 265 | 156 | 8 | 137 | 397 | 41 | 293 | 1.35e-30 | 127 |
| Msa0315380 | AT5G43710.1 | 40.385 | 104 | 53 | 4 | 516 | 613 | 373 | 473 | 8.57e-11 | 65.5 |
| Msa0315380 | AT1G27520.1 | 31.111 | 270 | 162 | 6 | 137 | 388 | 38 | 301 | 1.70e-25 | 111 |
| Msa0315380 | AT1G27520.1 | 42.593 | 108 | 58 | 3 | 506 | 613 | 375 | 478 | 1.96e-15 | 80.1 |
Find 129 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAACTACAATACGGGTTT+TGG | 0.191966 | 2_4:+11682981 | Msa0315380:CDS |
| CAAATTTGTCCAATGGAATA+TGG | 0.197983 | 2_4:-11687557 | None:intergenic |
| GTTTCTCGAGATCAAGTATT+TGG | 0.219206 | 2_4:+11682541 | Msa0315380:CDS |
| CTGTTCTTGATATTGATCTT+TGG | 0.231658 | 2_4:+11682472 | Msa0315380:CDS |
| ACTAATTGCAGCCCTGATTC+TGG | 0.249584 | 2_4:+11683563 | Msa0315380:intron |
| ACAATCACGCTTTCGGTTAC+TGG | 0.250584 | 2_4:-11682425 | None:intergenic |
| AGTATTTATACTTGCTCTTT+GGG | 0.255746 | 2_4:+11687526 | Msa0315380:CDS |
| GTATCTGGTGATCAGAAATA+TGG | 0.270434 | 2_4:+11683264 | Msa0315380:CDS |
| AAGTATTTATACTTGCTCTT+TGG | 0.272048 | 2_4:+11687525 | Msa0315380:CDS |
| TCCTCCTAGAAGAGATAAAA+TGG | 0.274527 | 2_4:+11687476 | Msa0315380:CDS |
| CTGGAAGATTGAAGAAATTC+TGG | 0.283968 | 2_4:+11682605 | Msa0315380:CDS |
| AAAATGGAGACTTTCTTTCT+AGG | 0.288254 | 2_4:+11687492 | Msa0315380:CDS |
| TACTGGTGGCTATAGTTCTT+TGG | 0.292188 | 2_4:+11687434 | Msa0315380:CDS |
| TCGCCCTCGTTCTTTCTTCA+AGG | 0.310085 | 2_4:+11681221 | Msa0315380:CDS |
| TGCAGAACAACGTCACTAAA+TGG | 0.314282 | 2_4:-11683153 | None:intergenic |
| AATTATCTCAGTTCTGTATC+TGG | 0.316565 | 2_4:+11683249 | Msa0315380:CDS |
| CCATAGCTCGTTTCTTTGTA+AGG | 0.319234 | 2_4:-11686318 | None:intergenic |
| GTATGAAAGTAAGCAATTTC+AGG | 0.324527 | 2_4:-11686445 | None:intergenic |
| TTTGTTGGAGAATTGCCTTC+TGG | 0.325467 | 2_4:+11683776 | Msa0315380:CDS |
| TCTTGATACAGCTATGATAA+TGG | 0.327964 | 2_4:+11682870 | Msa0315380:CDS |
| CCACTAAACTGTCCAGAATC+AGG | 0.329510 | 2_4:-11683575 | None:intergenic |
| TCTAGATAAACAGATGGTTT+AGG | 0.332126 | 2_4:-11683069 | None:intergenic |
| ACTCATTTCTTCAAATTGAT+TGG | 0.333373 | 2_4:-11687606 | None:intergenic |
| TTATTACTCACTTTAGTATC+AGG | 0.346107 | 2_4:-11682661 | None:intergenic |
| GACCTTGTTCAGAAAATTCC+TGG | 0.347258 | 2_4:-11687080 | None:intergenic |
| CAACATGGAACTGACGGGTT+GGG | 0.368226 | 2_4:+11682820 | Msa0315380:CDS |
| AGCTAATACAATCACGCTTT+CGG | 0.368641 | 2_4:-11682432 | None:intergenic |
| TCAGTTCCATGTTGGCTAAC+TGG | 0.369221 | 2_4:-11682811 | None:intergenic |
| TTCTTCAAATTGATTGGTAT+AGG | 0.372002 | 2_4:-11687600 | None:intergenic |
| TTTGAAAAGTACACAAAGAT+TGG | 0.392558 | 2_4:+11687411 | Msa0315380:CDS |
| ATGAGTACTTACTCAAAGTA+TGG | 0.392656 | 2_4:+11683636 | Msa0315380:CDS |
| CTTGATACAGCTATGATAAT+GGG | 0.393096 | 2_4:+11682871 | Msa0315380:CDS |
| GGAACTAGTCCTTCAACCTT+TGG | 0.396608 | 2_4:-11683327 | None:intergenic |
| CCTGATTCTGGACAGTTTAG+TGG | 0.400177 | 2_4:+11683575 | Msa0315380:CDS |
| GATTGTATTAGCTGCAGTAC+TGG | 0.404778 | 2_4:+11682442 | Msa0315380:CDS |
| AACATGGAACTGACGGGTTG+GGG | 0.421095 | 2_4:+11682821 | Msa0315380:CDS |
| TAGTGGAGAAAATATTAGAC+TGG | 0.427714 | 2_4:+11683592 | Msa0315380:CDS |
| ATATTTATACGAGATGTATA+AGG | 0.428320 | 2_4:+11683694 | Msa0315380:CDS |
| GTCTTACAGATATCGTGAAT+GGG | 0.432699 | 2_4:+11687368 | Msa0315380:intron |
| ACAACGTCACTAAATGGAAT+AGG | 0.442276 | 2_4:-11683147 | None:intergenic |
| ATTCCATACCTAATGTAGAT+AGG | 0.447704 | 2_4:-11683348 | None:intergenic |
| AAGAATGACTCCACAGTCTC+AGG | 0.450720 | 2_4:-11687180 | None:intergenic |
| GAAACTACACGAGCTGGACT+TGG | 0.451907 | 2_4:-11682523 | None:intergenic |
| AGGAAGCAATGAATGGTGTT+AGG | 0.452243 | 2_4:+11683714 | Msa0315380:CDS |
| AACAGCAGTAATAGTGGTGC+TGG | 0.453878 | 2_4:+11682586 | Msa0315380:CDS |
| CTCAGTGACTTCAACTGGCC+TGG | 0.457948 | 2_4:+11686420 | Msa0315380:CDS |
| ATTTATTCGAAACTACAATA+CGG | 0.458553 | 2_4:+11682974 | Msa0315380:CDS |
| AAATTTGTCCAATGGAATAT+GGG | 0.461803 | 2_4:-11687556 | None:intergenic |
| GACTAGTTCCTATCTACATT+AGG | 0.462538 | 2_4:+11683340 | Msa0315380:CDS |
| ACAAATCGTTGTGGATTACT+AGG | 0.463157 | 2_4:+11682710 | Msa0315380:CDS |
| GAAAGAACGAGGGCGAAACT+TGG | 0.463754 | 2_4:-11681214 | None:intergenic |
| ATGTACTCAGTGACTTCAAC+TGG | 0.468854 | 2_4:+11686415 | Msa0315380:CDS |
| TTTATTCGAAACTACAATAC+GGG | 0.471815 | 2_4:+11682975 | Msa0315380:CDS |
| TTCAACCCACGATCCCGCTT+CGG | 0.485302 | 2_4:-11682911 | None:intergenic |
| TGTCTTACAGATATCGTGAA+TGG | 0.485331 | 2_4:+11687367 | Msa0315380:intron |
| GTTAAGAAAACAGTTCCAAA+TGG | 0.487742 | 2_4:+11683746 | Msa0315380:CDS |
| AAGACTCTTCCAAAGGTTGA+AGG | 0.488433 | 2_4:+11683318 | Msa0315380:CDS |
| TGGTGATCAGAAATATGGTT+TGG | 0.490306 | 2_4:+11683269 | Msa0315380:CDS |
| GGGATTAGGTGCTACGGTAG+TGG | 0.492270 | 2_4:+11682843 | Msa0315380:CDS |
| GATGAAGTTGTTGCCGAAGC+GGG | 0.497419 | 2_4:+11682898 | Msa0315380:CDS |
| TCTCTTGAGACCTGAGACTG+TGG | 0.504520 | 2_4:+11687170 | Msa0315380:CDS |
| GTGCATATCATCTAAGTGGC+GGG | 0.505905 | 2_4:+11683016 | Msa0315380:CDS |
| TCGTCAGCGCATAACGCTCC+TGG | 0.506455 | 2_4:+11683180 | Msa0315380:CDS |
| CATCTAAGTGGCGGGGAACA+AGG | 0.506851 | 2_4:+11683024 | Msa0315380:CDS |
| TCACTAAATGGAATAGGAGT+TGG | 0.513758 | 2_4:-11683141 | None:intergenic |
| AGTAAGCAATTTCAGGAGCC+AGG | 0.515536 | 2_4:-11686438 | None:intergenic |
| TTGTTGCCGAAGCGGGATCG+TGG | 0.519393 | 2_4:+11682905 | Msa0315380:CDS |
| CCAACATGGAACTGACGGGT+TGG | 0.523038 | 2_4:+11682819 | Msa0315380:CDS |
| AAGTACACAAAGATTGGTAC+TGG | 0.525404 | 2_4:+11687417 | Msa0315380:CDS |
| CTTATGCCAGTTAGCCAACA+TGG | 0.526134 | 2_4:+11682805 | Msa0315380:CDS |
| AAATGGAATAGGAGTTGGAC+TGG | 0.534404 | 2_4:-11683136 | None:intergenic |
| ACAGATATCGTGAATGGGGT+TGG | 0.535004 | 2_4:+11687373 | Msa0315380:intron |
| ACAGAAAACAGCAGTAATAG+TGG | 0.535245 | 2_4:+11682580 | Msa0315380:CDS |
| GGTAATTGAGGAGGAAGTCT+TGG | 0.538080 | 2_4:-11682637 | None:intergenic |
| GAATTGCCTTCTGGATCAAA+TGG | 0.538225 | 2_4:+11683785 | Msa0315380:CDS |
| GGATAGCTCCCATATTCCAT+TGG | 0.541403 | 2_4:+11687548 | Msa0315380:CDS |
| ACATGGAACTGACGGGTTGG+GGG | 0.541952 | 2_4:+11682822 | Msa0315380:CDS |
| CACGCTTTCGGTTACTGGTG+AGG | 0.542696 | 2_4:-11682420 | None:intergenic |
| ATTGAAGAAATTCTGGAGAC+GGG | 0.549722 | 2_4:+11682612 | Msa0315380:CDS |
| TTAGTATCAGGTGGTAATTG+AGG | 0.554698 | 2_4:-11682649 | None:intergenic |
| GATTGAAGAAATTCTGGAGA+CGG | 0.555029 | 2_4:+11682611 | Msa0315380:CDS |
| TTAAGTGCATATCATCTAAG+TGG | 0.557241 | 2_4:+11683012 | Msa0315380:CDS |
| TCTCGAGAAACTACACGAGC+TGG | 0.558741 | 2_4:-11682529 | None:intergenic |
| ATGTATAAGGAAGCAATGAA+TGG | 0.559567 | 2_4:+11683707 | Msa0315380:CDS |
| TGATCAGAAATATGGTTTGG+AGG | 0.560762 | 2_4:+11683272 | Msa0315380:CDS |
| ATTGTATTAGCTGCAGTACT+GGG | 0.563271 | 2_4:+11682443 | Msa0315380:CDS |
| CACTAAACTGTCCAGAATCA+GGG | 0.563296 | 2_4:-11683574 | None:intergenic |
| AAACTACACGAGCTGGACTT+GGG | 0.563836 | 2_4:-11682522 | None:intergenic |
| ACCTTGTTCAGAAAATTCCT+GGG | 0.566706 | 2_4:-11687079 | None:intergenic |
| AAGAGATTATGACGATCAGC+AGG | 0.567199 | 2_4:-11687153 | None:intergenic |
| GTATTTATACTTGCTCTTTG+GGG | 0.567861 | 2_4:+11687527 | Msa0315380:CDS |
| GATTGGTATAGGATGTGCTT+CGG | 0.572064 | 2_4:-11687589 | None:intergenic |
| GTATCAGGTGGTAATTGAGG+AGG | 0.574049 | 2_4:-11682646 | None:intergenic |
| GCTGTTTCTAGATAAACAGA+TGG | 0.580943 | 2_4:-11683075 | None:intergenic |
| TGTTGCCGAAGCGGGATCGT+GGG | 0.581737 | 2_4:+11682906 | Msa0315380:CDS |
| GGAACGAACATAACTCATGC+AGG | 0.586541 | 2_4:+11683045 | Msa0315380:CDS |
| CCTTACAAAGAAACGAGCTA+TGG | 0.587299 | 2_4:+11686318 | Msa0315380:CDS |
| CATGGAACTGACGGGTTGGG+GGG | 0.590300 | 2_4:+11682823 | Msa0315380:CDS |
| TCTGGAGTAGGGTAGAGACT+TGG | 0.592323 | 2_4:-11681169 | None:intergenic |
| CCAACCCGTCAGTTCCATGT+TGG | 0.596884 | 2_4:-11682819 | None:intergenic |
| TTGCCTTCTGGATCAAATGG+TGG | 0.598116 | 2_4:+11683788 | Msa0315380:CDS |
| TTGGGCTATGTGTCAGCACA+AGG | 0.606708 | 2_4:-11682504 | None:intergenic |
| TTACTCACTTTAGTATCAGG+TGG | 0.608788 | 2_4:-11682658 | None:intergenic |
| GTTAGCCAACATGGAACTGA+CGG | 0.609641 | 2_4:+11682814 | Msa0315380:CDS |
| TCTGAACAAGGTCATGATGG+AGG | 0.609943 | 2_4:+11687090 | Msa0315380:CDS |
| AGTGGAGAAAATATTAGACT+GGG | 0.611043 | 2_4:+11683593 | Msa0315380:CDS |
| TTTGGAGGCAATGAAAGTCA+TGG | 0.611965 | 2_4:+11683287 | Msa0315380:CDS |
| TGATGAAGTTGTTGCCGAAG+CGG | 0.613160 | 2_4:+11682897 | Msa0315380:CDS |
| TGCATATCATCTAAGTGGCG+GGG | 0.615517 | 2_4:+11683017 | Msa0315380:CDS |
| AATATTAGACTGGGATCTCG+TGG | 0.617674 | 2_4:+11683602 | Msa0315380:CDS |
| TACACAAAGATTGGTACTGG+TGG | 0.617882 | 2_4:+11687420 | Msa0315380:CDS |
| AATTGCTTACTTTCATACTG+AGG | 0.618099 | 2_4:+11686450 | Msa0315380:CDS |
| GACGTGCTACTCAGTCCACC+AGG | 0.621157 | 2_4:-11683198 | None:intergenic |
| AAACCACCATTTGATCCAGA+AGG | 0.629172 | 2_4:-11683791 | None:intergenic |
| TCTTACAGATATCGTGAATG+GGG | 0.629365 | 2_4:+11687369 | Msa0315380:intron |
| TTAGCCAACATGGAACTGAC+GGG | 0.633004 | 2_4:+11682815 | Msa0315380:CDS |
| CATAAGCTCATCATAACCCA+TGG | 0.635367 | 2_4:-11682788 | None:intergenic |
| AGTGCATATCATCTAAGTGG+CGG | 0.641743 | 2_4:+11683015 | Msa0315380:CDS |
| AACTAGACGACAAATCGTTG+TGG | 0.645151 | 2_4:+11682701 | Msa0315380:CDS |
| ACTTTAGATCTTCTGTAATG+CGG | 0.651471 | 2_4:-11687212 | None:intergenic |
| ATGTGAAAGCAGATAGAAGA+CGG | 0.653738 | 2_4:-11683113 | None:intergenic |
| CTCAAAGTATGGCTTCAGAG+TGG | 0.662041 | 2_4:+11683647 | Msa0315380:CDS |
| TCAGCGCATAACGCTCCTGG+TGG | 0.663506 | 2_4:+11683183 | Msa0315380:CDS |
| GCACATAAAGACTCTTCCAA+AGG | 0.663995 | 2_4:+11683311 | Msa0315380:CDS |
| ATTGAACTCGAGCTGCAATG+TGG | 0.669842 | 2_4:-11683229 | None:intergenic |
| CAACCTTGAAGAAAGAACGA+GGG | 0.673362 | 2_4:-11681224 | None:intergenic |
| TGGGTATCAAAAGCATACAT+CGG | 0.679704 | 2_4:-11687060 | None:intergenic |
| GTATCAAAAGCATACATCGG+AGG | 0.706250 | 2_4:-11687057 | None:intergenic |
| GCAACCTTGAAGAAAGAACG+AGG | 0.709403 | 2_4:-11681225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATTT+AGG | + | chr2_4:11686702-11686721 | Msa0315380:intron | 0.0% |
| !! | TATATATATATATATATTTA+GGG | + | chr2_4:11686703-11686722 | Msa0315380:intron | 0.0% |
| !!! | TTTTTAAGTGATTAAATTTT+GGG | - | chr2_4:11684273-11684292 | None:intergenic | 10.0% |
| !!! | ATTTTTAAGTGATTAAATTT+TGG | - | chr2_4:11684274-11684293 | None:intergenic | 10.0% |
| !! | AAATTTAATCACTTAAAAAT+TGG | + | chr2_4:11684274-11684293 | Msa0315380:intron | 10.0% |
| !! | ATATACATAAATGATTATTT+GGG | - | chr2_4:11687345-11687364 | None:intergenic | 10.0% |
| !! | TATATACATAAATGATTATT+TGG | - | chr2_4:11687346-11687365 | None:intergenic | 10.0% |
| !! | TATAATAAGAGAAATGAATA+GGG | - | chr2_4:11681257-11681276 | None:intergenic | 15.0% |
| !!! | ATTCAATGTTTTTAGTTTTT+TGG | + | chr2_4:11681379-11681398 | Msa0315380:intron | 15.0% |
| !! | GTAAAATTTAAATATCAAGA+AGG | - | chr2_4:11681745-11681764 | None:intergenic | 15.0% |
| !! | AAAATGTATTTAATACAAGA+TGG | - | chr2_4:11681825-11681844 | None:intergenic | 15.0% |
| !! | ATATATACTAAATATGTGTT+TGG | - | chr2_4:11682145-11682164 | None:intergenic | 15.0% |
| !!! | ATCTACTTTTTTGTATAAAT+CGG | - | chr2_4:11682186-11682205 | None:intergenic | 15.0% |
| !! | CAATTAGAAACTTAAAAATT+AGG | - | chr2_4:11683852-11683871 | None:intergenic | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | - | chr2_4:11683998-11684017 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | - | chr2_4:11683999-11684018 | None:intergenic | 15.0% |
| !! | TTTAATACATATACAAACAA+AGG | + | chr2_4:11684040-11684059 | Msa0315380:intron | 15.0% |
| !! | ATTAAACCTCATTTAAAAAT+TGG | - | chr2_4:11685462-11685481 | None:intergenic | 15.0% |
| !! | TATTTATCATAATATCAGAT+AGG | - | chr2_4:11685690-11685709 | None:intergenic | 15.0% |
| !! | CTATAATAAGAGAAATGAAT+AGG | - | chr2_4:11681258-11681277 | None:intergenic | 20.0% |
| !! | TGATAAATCTTAACCTAAAT+CGG | - | chr2_4:11681642-11681661 | None:intergenic | 20.0% |
| !! | TAAAGAAATTAGCATATGTT+GGG | + | chr2_4:11681994-11682013 | Msa0315380:intron | 20.0% |
| !! | ACAATTTAAAAGTTCAAGAA+GGG | - | chr2_4:11682250-11682269 | None:intergenic | 20.0% |
| !! | TACAATTTAAAAGTTCAAGA+AGG | - | chr2_4:11682251-11682270 | None:intergenic | 20.0% |
| !! | GTCGTTTACTTAAAATTAAA+AGG | + | chr2_4:11682344-11682363 | Msa0315380:intron | 20.0% |
| !! | ATTTATTCGAAACTACAATA+CGG | + | chr2_4:11682974-11682993 | Msa0315380:CDS | 20.0% |
| !! | ATATTTATACGAGATGTATA+AGG | + | chr2_4:11683694-11683713 | Msa0315380:CDS | 20.0% |
| !! | TATTAATTAGGGATATGTTT+AGG | - | chr2_4:11683987-11684006 | None:intergenic | 20.0% |
| !! | ATGTGAACAAAATTTCATTA+GGG | + | chr2_4:11684568-11684587 | Msa0315380:intron | 20.0% |
| !!! | GAAGGTTTTTAAAGATTAAA+GGG | - | chr2_4:11685112-11685131 | None:intergenic | 20.0% |
| !!! | AGAAGGTTTTTAAAGATTAA+AGG | - | chr2_4:11685113-11685132 | None:intergenic | 20.0% |
| !! | AAGAAAATAAGAGAAGAAAA+TGG | - | chr2_4:11685233-11685252 | None:intergenic | 20.0% |
| !! | TTAAATGATTAAACAATGCA+AGG | + | chr2_4:11685406-11685425 | Msa0315380:intron | 20.0% |
| !! | TAAATGATTAAACAATGCAA+GGG | + | chr2_4:11685407-11685426 | Msa0315380:intron | 20.0% |
| !! | TGATAATTTCAATCAACTAA+AGG | - | chr2_4:11685510-11685529 | None:intergenic | 20.0% |
| !! | TTAGTTGATTGAAATTATCA+TGG | + | chr2_4:11685510-11685529 | Msa0315380:intron | 20.0% |
| !! | TTTATAATCTGTTAAAATGC+AGG | - | chr2_4:11685837-11685856 | None:intergenic | 20.0% |
| !! | TTTCCTATTTATTAAGGATT+TGG | + | chr2_4:11686077-11686096 | Msa0315380:intron | 20.0% |
| !! | CATATACAAAATGGTATATT+AGG | - | chr2_4:11686623-11686642 | None:intergenic | 20.0% |
| !! | AGTATTAATTAGAGGTTTAT+TGG | + | chr2_4:11686780-11686799 | Msa0315380:intron | 20.0% |
| !! | GTATTAATTAGAGGTTTATT+GGG | + | chr2_4:11686781-11686800 | Msa0315380:intron | 20.0% |
| !! | TATTAATTAGAGGTTTATTG+GGG | + | chr2_4:11686782-11686801 | Msa0315380:intron | 20.0% |
| !!! | TTTGAAAAGGTCTTATATTT+AGG | + | chr2_4:11686830-11686849 | Msa0315380:intron | 20.0% |
| !!! | TTGAAAAGGTCTTATATTTA+GGG | + | chr2_4:11686831-11686850 | Msa0315380:intron | 20.0% |
| !!! | ATGTGAAGTATTTTTTTACT+TGG | + | chr2_4:11687000-11687019 | Msa0315380:intron | 20.0% |
| !! | TTGGTTTATTGTAATTAGAA+TGG | + | chr2_4:11687019-11687038 | Msa0315380:intron | 20.0% |
| !! | AGTAATCTTATACATAAGAA+GGG | - | chr2_4:11687246-11687265 | None:intergenic | 20.0% |
| !! | AAGTAATCTTATACATAAGA+AGG | - | chr2_4:11687247-11687266 | None:intergenic | 20.0% |
| !! | TTAAAAACAAATTTGTCCAA+TGG | - | chr2_4:11687567-11687586 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTCTGTTTTTCG+TGG | + | chr2_4:11681287-11681306 | Msa0315380:intron | 25.0% |
| ! | CTACAAATACTAATTTCTCA+AGG | - | chr2_4:11681690-11681709 | None:intergenic | 25.0% |
| ! | AAGAAGGAAAGTGATAAAAT+CGG | - | chr2_4:11681729-11681748 | None:intergenic | 25.0% |
| !!! | ACATTTTCTGTTTTAGTTGT+TGG | + | chr2_4:11681838-11681857 | Msa0315380:intron | 25.0% |
| ! | TTTATCACTCATATCTCATA+TGG | + | chr2_4:11681960-11681979 | Msa0315380:intron | 25.0% |
| ! | CTAAAGAAATTAGCATATGT+TGG | + | chr2_4:11681993-11682012 | Msa0315380:intron | 25.0% |
| !!! | TTGCTACTTCTTTATTTTTC+AGG | + | chr2_4:11682381-11682400 | Msa0315380:intron | 25.0% |
| ! | TTATTACTCACTTTAGTATC+AGG | - | chr2_4:11682664-11682683 | None:intergenic | 25.0% |
| ! | TTTATTCGAAACTACAATAC+GGG | + | chr2_4:11682975-11682994 | Msa0315380:CDS | 25.0% |
| ! | TCTAGAAACAGCTAAAAATT+TGG | + | chr2_4:11683086-11683105 | Msa0315380:CDS | 25.0% |
| ! | CTAGAAACAGCTAAAAATTT+GGG | + | chr2_4:11683087-11683106 | Msa0315380:CDS | 25.0% |
| ! | TCAATTAGTGTATTAGTATC+TGG | + | chr2_4:11683381-11683400 | Msa0315380:intron | 25.0% |
| ! | TGAAAGCGACTAAAAAAATA+GGG | - | chr2_4:11683483-11683502 | None:intergenic | 25.0% |
| ! | GGACAAAAATAAAGTCAAAT+GGG | - | chr2_4:11683915-11683934 | None:intergenic | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr2_4:11683950-11683969 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr2_4:11683951-11683970 | None:intergenic | 25.0% |
| ! | TATACAAACAAAGGACAATA+TGG | + | chr2_4:11684049-11684068 | Msa0315380:intron | 25.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | + | chr2_4:11684122-11684141 | Msa0315380:intron | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | + | chr2_4:11684123-11684142 | Msa0315380:intron | 25.0% |
| ! | AATAGGGGTCATTTAAAAAA+TGG | + | chr2_4:11684213-11684232 | Msa0315380:intron | 25.0% |
| !!! | TAAGTGATTAAATTTTGGGA+GGG | - | chr2_4:11684269-11684288 | None:intergenic | 25.0% |
| !! | TTAAGTGATTAAATTTTGGG+AGG | - | chr2_4:11684270-11684289 | None:intergenic | 25.0% |
| ! | CAATTACAATTCAGAAACTA+TGG | - | chr2_4:11684459-11684478 | None:intergenic | 25.0% |
| ! | TCATCATAGAAAAATAACAG+TGG | - | chr2_4:11684547-11684566 | None:intergenic | 25.0% |
| ! | GATGTGAACAAAATTTCATT+AGG | + | chr2_4:11684567-11684586 | Msa0315380:intron | 25.0% |
| ! | TTAAATGAGGTTTAATTGCA+AGG | + | chr2_4:11685466-11685485 | Msa0315380:intron | 25.0% |
| ! | ATCATAATATCAGATAGGTT+GGG | - | chr2_4:11685685-11685704 | None:intergenic | 25.0% |
| ! | TATCATAATATCAGATAGGT+TGG | - | chr2_4:11685686-11685705 | None:intergenic | 25.0% |
| !! | ATCACATTTTCAGTATATGA+TGG | - | chr2_4:11685719-11685738 | None:intergenic | 25.0% |
| ! | TATTGCAAATGTAAATGTTC+CGG | - | chr2_4:11685754-11685773 | None:intergenic | 25.0% |
| ! | ATTTGGAGAGATAAAAATGA+GGG | - | chr2_4:11685876-11685895 | None:intergenic | 25.0% |
| ! | AATTTGGAGAGATAAAAATG+AGG | - | chr2_4:11685877-11685896 | None:intergenic | 25.0% |
| ! | AATACCTTAGTTTATCTCAT+AGG | + | chr2_4:11685968-11685987 | Msa0315380:intron | 25.0% |
| ! | TAATCCTATGAGATAAACTA+AGG | - | chr2_4:11685975-11685994 | None:intergenic | 25.0% |
| ! | TTTCATATCTTGCAATATCT+TGG | + | chr2_4:11685996-11686015 | Msa0315380:intron | 25.0% |
| !! | CTCGATTTTCCTATTTATTA+AGG | + | chr2_4:11686071-11686090 | Msa0315380:intron | 25.0% |
| ! | ACTCCAAATCCTTAATAAAT+AGG | - | chr2_4:11686083-11686102 | None:intergenic | 25.0% |
| ! | TAGTATAAATAGCTCTTTAG+TGG | + | chr2_4:11686110-11686129 | Msa0315380:intron | 25.0% |
| ! | AAAAGTGAAAACATTAGAAG+GGG | - | chr2_4:11686539-11686558 | None:intergenic | 25.0% |
| ! | GAAAAGTGAAAACATTAGAA+GGG | - | chr2_4:11686540-11686559 | None:intergenic | 25.0% |
| ! | TGAAAAGTGAAAACATTAGA+AGG | - | chr2_4:11686541-11686560 | None:intergenic | 25.0% |
| ! | TTGTATCTAGTGATTTGAAA+AGG | + | chr2_4:11686817-11686836 | Msa0315380:intron | 25.0% |
| ! | GTAATCTTATACATAAGAAG+GGG | - | chr2_4:11687245-11687264 | None:intergenic | 25.0% |
| !! | AATCTTTGTGTACTTTTCAA+AGG | - | chr2_4:11687412-11687431 | None:intergenic | 25.0% |
| !! | TTTGAAAAGTACACAAAGAT+TGG | + | chr2_4:11687411-11687430 | Msa0315380:CDS | 25.0% |
| ! | AAGTATTTATACTTGCTCTT+TGG | + | chr2_4:11687525-11687544 | Msa0315380:CDS | 25.0% |
| ! | AGTATTTATACTTGCTCTTT+GGG | + | chr2_4:11687526-11687545 | Msa0315380:CDS | 25.0% |
| ! | AAATTTGTCCAATGGAATAT+GGG | - | chr2_4:11687559-11687578 | None:intergenic | 25.0% |
| ! | TTCTTCAAATTGATTGGTAT+AGG | - | chr2_4:11687603-11687622 | None:intergenic | 25.0% |
| ATAAGAGAAATGAATAGGGA+AGG | - | chr2_4:11681253-11681272 | None:intergenic | 30.0% | |
| !!! | ATTAGTTGCTTGCTATTTTC+TGG | + | chr2_4:11681441-11681460 | Msa0315380:intron | 30.0% |
| !! | TGACGTTTTGTATTAGTTTG+AGG | + | chr2_4:11681772-11681791 | Msa0315380:intron | 30.0% |
| ! | GAGGTGTGATTTCTTTTATT+TGG | + | chr2_4:11681791-11681810 | Msa0315380:intron | 30.0% |
| ! | CTTCTCATTTTCATGTCAAA+AGG | - | chr2_4:11682057-11682076 | None:intergenic | 30.0% |
| TTAGTATATATAGTTGCGTG+AGG | + | chr2_4:11682154-11682173 | Msa0315380:intron | 30.0% | |
| ATAAATCTCAAACTGACACA+AGG | - | chr2_4:11682287-11682306 | None:intergenic | 30.0% | |
| ! | GTGTCAGTTTGAGATTTATT+CGG | + | chr2_4:11682288-11682307 | Msa0315380:intron | 30.0% |
| CTGTTCTTGATATTGATCTT+TGG | + | chr2_4:11682472-11682491 | Msa0315380:CDS | 30.0% | |
| TCTTGATACAGCTATGATAA+TGG | + | chr2_4:11682870-11682889 | Msa0315380:CDS | 30.0% | |
| CTTGATACAGCTATGATAAT+GGG | + | chr2_4:11682871-11682890 | Msa0315380:CDS | 30.0% | |
| !!! | ACCTTTTTTGCTAATTCTCT+CGG | - | chr2_4:11682947-11682966 | None:intergenic | 30.0% |
| TTAAGTGCATATCATCTAAG+TGG | + | chr2_4:11683012-11683031 | Msa0315380:CDS | 30.0% | |
| TCTAGATAAACAGATGGTTT+AGG | - | chr2_4:11683072-11683091 | None:intergenic | 30.0% | |
| AATTATCTCAGTTCTGTATC+TGG | + | chr2_4:11683249-11683268 | Msa0315380:CDS | 30.0% | |
| ATTCCATACCTAATGTAGAT+AGG | - | chr2_4:11683351-11683370 | None:intergenic | 30.0% | |
| CTGAAAGCGACTAAAAAAAT+AGG | - | chr2_4:11683484-11683503 | None:intergenic | 30.0% | |
| !!! | CTATTTTTTTAGTCGCTTTC+AGG | + | chr2_4:11683482-11683501 | Msa0315380:intron | 30.0% |
| TAGTGGAGAAAATATTAGAC+TGG | + | chr2_4:11683592-11683611 | Msa0315380:CDS | 30.0% | |
| AGTGGAGAAAATATTAGACT+GGG | + | chr2_4:11683593-11683612 | Msa0315380:CDS | 30.0% | |
| ATGAGTACTTACTCAAAGTA+TGG | + | chr2_4:11683636-11683655 | Msa0315380:CDS | 30.0% | |
| ATGTATAAGGAAGCAATGAA+TGG | + | chr2_4:11683707-11683726 | Msa0315380:CDS | 30.0% | |
| GTTAAGAAAACAGTTCCAAA+TGG | + | chr2_4:11683746-11683765 | Msa0315380:CDS | 30.0% | |
| CAAAAATAAAGTCAAATGGG+TGG | - | chr2_4:11683912-11683931 | None:intergenic | 30.0% | |
| GGGACAAAAATAAAGTCAAA+TGG | - | chr2_4:11683916-11683935 | None:intergenic | 30.0% | |
| TGAAAAGGGGTTTAGATTTA+GGG | - | chr2_4:11683936-11683955 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTAGATTT+AGG | - | chr2_4:11683937-11683956 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr2_4:11683949-11683968 | None:intergenic | 30.0% | |
| AAGAGTTTGTAGAAGATGTA+TGG | + | chr2_4:11684617-11684636 | Msa0315380:intron | 30.0% | |
| AAGAAAATGGAAGAAAAGGA+AGG | - | chr2_4:11685220-11685239 | None:intergenic | 30.0% | |
| AGAGAAGAAAATGGAAGAAA+AGG | - | chr2_4:11685224-11685243 | None:intergenic | 30.0% | |
| GAAAAAACCATCAATAGTTC+AGG | - | chr2_4:11685586-11685605 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTCTTAGACGTTAT+CGG | + | chr2_4:11685597-11685616 | Msa0315380:intron | 30.0% |
| TGAAAATGTGATACTGTGAT+TGG | + | chr2_4:11685727-11685746 | Msa0315380:intron | 30.0% | |
| !! | GCAGTTTTGTCTAATAGAAA+AGG | + | chr2_4:11685801-11685820 | Msa0315380:intron | 30.0% |
| ATAATCTGTTAAAATGCAGG+AGG | - | chr2_4:11685834-11685853 | None:intergenic | 30.0% | |
| CAAAGTGCAGAACTAAAATT+TGG | - | chr2_4:11685893-11685912 | None:intergenic | 30.0% | |
| CAGAACTTCAAATAACTAAG+AGG | + | chr2_4:11686227-11686246 | Msa0315380:intron | 30.0% | |
| !! | TCAAATAACTAAGAGGTATC+TGG | + | chr2_4:11686234-11686253 | Msa0315380:intron | 30.0% |
| GTATGAAAGTAAGCAATTTC+AGG | - | chr2_4:11686448-11686467 | None:intergenic | 30.0% | |
| AATTGCTTACTTTCATACTG+AGG | + | chr2_4:11686450-11686469 | Msa0315380:CDS | 30.0% | |
| TAGAAGGGGCTTATAAAAAA+AGG | - | chr2_4:11686525-11686544 | None:intergenic | 30.0% | |
| ACACACACACATATACAAAA+TGG | - | chr2_4:11686632-11686651 | None:intergenic | 30.0% | |
| ! | CTTAGTGGAGTATTAATTAG+AGG | + | chr2_4:11686772-11686791 | Msa0315380:intron | 30.0% |
| ! | CCTTTTTATAAGCACCTTTT+GGG | - | chr2_4:11686867-11686886 | None:intergenic | 30.0% |
| !! | CCAAAAGGTGCTTATAAAAA+GGG | + | chr2_4:11686865-11686884 | Msa0315380:intron | 30.0% |
| TGCTTATAAAAAGGGATTGA+TGG | + | chr2_4:11686873-11686892 | Msa0315380:intron | 30.0% | |
| ACTTTAGATCTTCTGTAATG+CGG | - | chr2_4:11687215-11687234 | None:intergenic | 30.0% | |
| AAAATGGAGACTTTCTTTCT+AGG | + | chr2_4:11687492-11687511 | Msa0315380:CDS | 30.0% | |
| GTATTTATACTTGCTCTTTG+GGG | + | chr2_4:11687527-11687546 | Msa0315380:CDS | 30.0% | |
| CAAATTTGTCCAATGGAATA+TGG | - | chr2_4:11687560-11687579 | None:intergenic | 30.0% | |
| !!! | TCAACATCTTTTCTGGAGTA+GGG | - | chr2_4:11681183-11681202 | None:intergenic | 35.0% |
| ! | ATCGTAGTCAACATCTTTTC+TGG | - | chr2_4:11681190-11681209 | None:intergenic | 35.0% |
| CTGTTAGAACTTGAGAATTG+CGG | + | chr2_4:11681325-11681344 | Msa0315380:intron | 35.0% | |
| GAGATGTTACAAGTCTCTTT+CGG | + | chr2_4:11681561-11681580 | Msa0315380:intron | 35.0% | |
| TTAGTTGTTGGATGACGTAA+CGG | + | chr2_4:11681850-11681869 | Msa0315380:intron | 35.0% | |
| TTCAACTTAACTAGTAGCCT+CGG | + | chr2_4:11681885-11681904 | Msa0315380:intron | 35.0% | |
| GAGTGATAAATCTTAACCCA+GGG | - | chr2_4:11681950-11681969 | None:intergenic | 35.0% | |
| TGAGTGATAAATCTTAACCC+AGG | - | chr2_4:11681951-11681970 | None:intergenic | 35.0% | |
| ATGTGTTTGGATATGTGTCA+CGG | - | chr2_4:11682132-11682151 | None:intergenic | 35.0% | |
| GGAAGCGACAAAAAGATTAT+TGG | - | chr2_4:11682229-11682248 | None:intergenic | 35.0% | |
| AGCTAATACAATCACGCTTT+CGG | - | chr2_4:11682435-11682454 | None:intergenic | 35.0% | |
| ATTGTATTAGCTGCAGTACT+GGG | + | chr2_4:11682443-11682462 | Msa0315380:CDS | 35.0% | |
| GTTTCTCGAGATCAAGTATT+TGG | + | chr2_4:11682541-11682560 | Msa0315380:CDS | 35.0% | |
| ACAGAAAACAGCAGTAATAG+TGG | + | chr2_4:11682580-11682599 | Msa0315380:CDS | 35.0% | |
| CTGGAAGATTGAAGAAATTC+TGG | + | chr2_4:11682605-11682624 | Msa0315380:CDS | 35.0% | |
| ! | GATTGAAGAAATTCTGGAGA+CGG | + | chr2_4:11682611-11682630 | Msa0315380:CDS | 35.0% |
| ! | ATTGAAGAAATTCTGGAGAC+GGG | + | chr2_4:11682612-11682631 | Msa0315380:CDS | 35.0% |
| TTAGTATCAGGTGGTAATTG+AGG | - | chr2_4:11682652-11682671 | None:intergenic | 35.0% | |
| TTACTCACTTTAGTATCAGG+TGG | - | chr2_4:11682661-11682680 | None:intergenic | 35.0% | |
| ! | ACAAATCGTTGTGGATTACT+AGG | + | chr2_4:11682710-11682729 | Msa0315380:CDS | 35.0% |
| TACTAGGCAACAAAAAGTCA+AGG | + | chr2_4:11682726-11682745 | Msa0315380:CDS | 35.0% | |
| GGCTACAAAAAATATGCCAT+GGG | + | chr2_4:11682772-11682791 | Msa0315380:CDS | 35.0% | |
| ! | TTTTGCTAATTCTCTCGGAA+AGG | - | chr2_4:11682942-11682961 | None:intergenic | 35.0% |
| TCCGAGAGAATTAGCAAAAA+AGG | + | chr2_4:11682943-11682962 | Msa0315380:CDS | 35.0% | |
| ! | GAAACTACAATACGGGTTTT+GGG | + | chr2_4:11682982-11683001 | Msa0315380:CDS | 35.0% |
| !! | GCTGTTTCTAGATAAACAGA+TGG | - | chr2_4:11683078-11683097 | None:intergenic | 35.0% |
| ATGTGAAAGCAGATAGAAGA+CGG | - | chr2_4:11683116-11683135 | None:intergenic | 35.0% | |
| TCACTAAATGGAATAGGAGT+TGG | - | chr2_4:11683144-11683163 | None:intergenic | 35.0% | |
| ACAACGTCACTAAATGGAAT+AGG | - | chr2_4:11683150-11683169 | None:intergenic | 35.0% | |
| GTATCTGGTGATCAGAAATA+TGG | + | chr2_4:11683264-11683283 | Msa0315380:CDS | 35.0% | |
| TGGTGATCAGAAATATGGTT+TGG | + | chr2_4:11683269-11683288 | Msa0315380:CDS | 35.0% | |
| ! | TGATCAGAAATATGGTTTGG+AGG | + | chr2_4:11683272-11683291 | Msa0315380:CDS | 35.0% |
| ! | GACTAGTTCCTATCTACATT+AGG | + | chr2_4:11683340-11683359 | Msa0315380:CDS | 35.0% |
| GTTCCTATCTACATTAGGTA+TGG | + | chr2_4:11683345-11683364 | Msa0315380:intron | 35.0% | |
| TAGTAGAGATCTACTGAGAA+AGG | - | chr2_4:11683523-11683542 | None:intergenic | 35.0% | |
| CCAACAAAAACTAGTCCATT+TGG | - | chr2_4:11683764-11683783 | None:intergenic | 35.0% | |
| !!! | CCAAATGGACTAGTTTTTGT+TGG | + | chr2_4:11683761-11683780 | Msa0315380:CDS | 35.0% |
| !! | CTACCAGATGATCCATTTTT+GGG | - | chr2_4:11683820-11683839 | None:intergenic | 35.0% |
| CAAATGGGTGGTTAGATATA+GGG | - | chr2_4:11683900-11683919 | None:intergenic | 35.0% | |
| TCAAATGGGTGGTTAGATAT+AGG | - | chr2_4:11683901-11683920 | None:intergenic | 35.0% | |
| AATGTGAAAAAAGCAAAGGG+AGG | + | chr2_4:11684126-11684145 | Msa0315380:intron | 35.0% | |
| TTAAATGACCCCTATTTGCA+GGG | - | chr2_4:11684209-11684228 | None:intergenic | 35.0% | |
| TTTAAATGACCCCTATTTGC+AGG | - | chr2_4:11684210-11684229 | None:intergenic | 35.0% | |
| ! | TATGGTAAAGTTGTGTTGCT+GGG | - | chr2_4:11684441-11684460 | None:intergenic | 35.0% |
| TCTAATGGAAAGGTGAATGA+AGG | - | chr2_4:11684515-11684534 | None:intergenic | 35.0% | |
| TGGAACAAGAAGAGAGAATA+AGG | + | chr2_4:11684637-11684656 | Msa0315380:intron | 35.0% | |
| AAGAAGAGAGAATAAGGTAC+AGG | + | chr2_4:11684643-11684662 | Msa0315380:intron | 35.0% | |
| AACCCAAAACACAACAAACT+TGG | + | chr2_4:11684690-11684709 | Msa0315380:intron | 35.0% | |
| ACCCAAAACACAACAAACTT+GGG | + | chr2_4:11684691-11684710 | Msa0315380:intron | 35.0% | |
| AGTGATAAGAACAGTGCTAT+TGG | - | chr2_4:11684814-11684833 | None:intergenic | 35.0% | |
| TGTCTATACCCAATACACAT+CGG | + | chr2_4:11684850-11684869 | Msa0315380:intron | 35.0% | |
| TGAATGTTCCGATGTGTATT+GGG | - | chr2_4:11684861-11684880 | None:intergenic | 35.0% | |
| TTGAATGTTCCGATGTGTAT+TGG | - | chr2_4:11684862-11684881 | None:intergenic | 35.0% | |
| ATGGAAGAAAAGGAAGGAAA+GGG | - | chr2_4:11685214-11685233 | None:intergenic | 35.0% | |
| AATGGAAGAAAAGGAAGGAA+AGG | - | chr2_4:11685215-11685234 | None:intergenic | 35.0% | |
| AACTCATCTGTTTACTGACA+TGG | - | chr2_4:11685354-11685373 | None:intergenic | 35.0% | |
| ATGTCAGTAAACAGATGAGT+TGG | + | chr2_4:11685353-11685372 | Msa0315380:intron | 35.0% | |
| ! | CAGGGACCAATTTTTAAATG+AGG | + | chr2_4:11685453-11685472 | Msa0315380:intron | 35.0% |
| TGATTGTCCTGAACTATTGA+TGG | + | chr2_4:11685576-11685595 | Msa0315380:intron | 35.0% | |
| TCTGAGTTTCAGATGAAAGA+GGG | - | chr2_4:11686211-11686230 | None:intergenic | 35.0% | |
| TTCTGAGTTTCAGATGAAAG+AGG | - | chr2_4:11686212-11686231 | None:intergenic | 35.0% | |
| TCTGGTTAATGTTGTCATTC+AGG | + | chr2_4:11686252-11686271 | Msa0315380:intron | 35.0% | |
| ATTCAGGTGTGTTTCTTATC+TGG | + | chr2_4:11686268-11686287 | Msa0315380:intron | 35.0% | |
| TTTCTTTGTAAGGCCTTTAG+TGG | - | chr2_4:11686311-11686330 | None:intergenic | 35.0% | |
| ! | CAGCAAGCTTCAAATTTTCT+AGG | - | chr2_4:11686369-11686388 | None:intergenic | 35.0% |
| ACTTTCATACTGAGGTTAGT+AGG | + | chr2_4:11686458-11686477 | Msa0315380:intron | 35.0% | |
| GGGCTTATAAAAAAAGGACA+GGG | - | chr2_4:11686519-11686538 | None:intergenic | 35.0% | |
| TAATACTCCACTAAGTCTCT+TGG | - | chr2_4:11686767-11686786 | None:intergenic | 35.0% | |
| !!! | AGGGACAATTTTTTCCCAAA+AGG | + | chr2_4:11686850-11686869 | Msa0315380:intron | 35.0% |
| !! | CCCAAAAGGTGCTTATAAAA+AGG | + | chr2_4:11686864-11686883 | Msa0315380:intron | 35.0% |
| ! | CCCTTTTTATAAGCACCTTT+TGG | - | chr2_4:11686868-11686887 | None:intergenic | 35.0% |
| ! | TGGGTATCAAAAGCATACAT+CGG | - | chr2_4:11687063-11687082 | None:intergenic | 35.0% |
| ACCTTGTTCAGAAAATTCCT+GGG | - | chr2_4:11687082-11687101 | None:intergenic | 35.0% | |
| ! | TTTTCTGAACAAGGTCATGA+TGG | + | chr2_4:11687087-11687106 | Msa0315380:CDS | 35.0% |
| ! | TGTTCACTGTTTCTTGAGTA+TGG | - | chr2_4:11687293-11687312 | None:intergenic | 35.0% |
| TACTCAAGAAACAGTGAACA+TGG | + | chr2_4:11687293-11687312 | Msa0315380:intron | 35.0% | |
| ACTCAAGAAACAGTGAACAT+GGG | + | chr2_4:11687294-11687313 | Msa0315380:intron | 35.0% | |
| TGTCTTACAGATATCGTGAA+TGG | + | chr2_4:11687367-11687386 | Msa0315380:intron | 35.0% | |
| GTCTTACAGATATCGTGAAT+GGG | + | chr2_4:11687368-11687387 | Msa0315380:intron | 35.0% | |
| TCTTACAGATATCGTGAATG+GGG | + | chr2_4:11687369-11687388 | Msa0315380:intron | 35.0% | |
| AAGTACACAAAGATTGGTAC+TGG | + | chr2_4:11687417-11687436 | Msa0315380:CDS | 35.0% | |
| !! | ATTTTATCTCTTCTAGGAGG+AGG | - | chr2_4:11687477-11687496 | None:intergenic | 35.0% |
| TCCTCCTAGAAGAGATAAAA+TGG | + | chr2_4:11687476-11687495 | Msa0315380:CDS | 35.0% | |
| ! | TCCATTTTATCTCTTCTAGG+AGG | - | chr2_4:11687480-11687499 | None:intergenic | 35.0% |
| ! | GTCTCCATTTTATCTCTTCT+AGG | - | chr2_4:11687483-11687502 | None:intergenic | 35.0% |
| !!! | GTCAACATCTTTTCTGGAGT+AGG | - | chr2_4:11681184-11681203 | None:intergenic | 40.0% |
| CAACCTTGAAGAAAGAACGA+GGG | - | chr2_4:11681227-11681246 | None:intergenic | 40.0% | |
| TCGGCTTAATTAGTAGTCTC+AGG | + | chr2_4:11681580-11681599 | Msa0315380:intron | 40.0% | |
| ! | TTTAAAGCCGTTGCATTCTC+AGG | - | chr2_4:11681619-11681638 | None:intergenic | 40.0% |
| !! | CAACGGCTTTAAACCGATTT+AGG | + | chr2_4:11681626-11681645 | Msa0315380:intron | 40.0% |
| TTAGTATTTGTAGCTGCGTG+TGG | + | chr2_4:11681697-11681716 | Msa0315380:intron | 40.0% | |
| TAGTATTTGTAGCTGCGTGT+GGG | + | chr2_4:11681698-11681717 | Msa0315380:intron | 40.0% | |
| TCAACTTAACTAGTAGCCTC+GGG | + | chr2_4:11681886-11681905 | Msa0315380:intron | 40.0% | |
| !! | AACACTCGAATTTTAACCCG+AGG | - | chr2_4:11681905-11681924 | None:intergenic | 40.0% |
| TCGGGTTAAAATTCGAGTGT+TGG | + | chr2_4:11681904-11681923 | Msa0315380:intron | 40.0% | |
| ! | CACCAGATTTAAAACTCCCT+GGG | + | chr2_4:11681931-11681950 | Msa0315380:intron | 40.0% |
| !!! | AACCCAGGGAGTTTTAAATC+TGG | - | chr2_4:11681936-11681955 | None:intergenic | 40.0% |
| !! | GTAGAGCTTTTGTGTTGTTG+TGG | + | chr2_4:11682084-11682103 | Msa0315380:intron | 40.0% |
| TGTCACGGTTTGCAAAATCA+CGG | - | chr2_4:11682117-11682136 | None:intergenic | 40.0% | |
| GCGACAAAAAGATTATTGGC+AGG | - | chr2_4:11682225-11682244 | None:intergenic | 40.0% | |
| TGACACAAGGCATAAGCATT+CGG | - | chr2_4:11682274-11682293 | None:intergenic | 40.0% | |
| GATTGTATTAGCTGCAGTAC+TGG | + | chr2_4:11682442-11682461 | Msa0315380:CDS | 40.0% | |
| !!! | GATTTGTCGTCTAGTTTTGC+AGG | - | chr2_4:11682697-11682716 | None:intergenic | 40.0% |
| AACTAGACGACAAATCGTTG+TGG | + | chr2_4:11682701-11682720 | Msa0315380:CDS | 40.0% | |
| GGGCTACAAAAAATATGCCA+TGG | + | chr2_4:11682771-11682790 | Msa0315380:CDS | 40.0% | |
| CATAAGCTCATCATAACCCA+TGG | - | chr2_4:11682791-11682810 | None:intergenic | 40.0% | |
| ! | CGAAACTACAATACGGGTTT+TGG | + | chr2_4:11682981-11683000 | Msa0315380:CDS | 40.0% |
| AGTGCATATCATCTAAGTGG+CGG | + | chr2_4:11683015-11683034 | Msa0315380:CDS | 40.0% | |
| AAATGGAATAGGAGTTGGAC+TGG | - | chr2_4:11683139-11683158 | None:intergenic | 40.0% | |
| TGCAGAACAACGTCACTAAA+TGG | - | chr2_4:11683156-11683175 | None:intergenic | 40.0% | |
| TTTGGAGGCAATGAAAGTCA+TGG | + | chr2_4:11683287-11683306 | Msa0315380:CDS | 40.0% | |
| GCACATAAAGACTCTTCCAA+AGG | + | chr2_4:11683311-11683330 | Msa0315380:CDS | 40.0% | |
| AAGACTCTTCCAAAGGTTGA+AGG | + | chr2_4:11683318-11683337 | Msa0315380:CDS | 40.0% | |
| CACTAAACTGTCCAGAATCA+GGG | - | chr2_4:11683577-11683596 | None:intergenic | 40.0% | |
| AATATTAGACTGGGATCTCG+TGG | + | chr2_4:11683602-11683621 | Msa0315380:CDS | 40.0% | |
| AGGAAGCAATGAATGGTGTT+AGG | + | chr2_4:11683714-11683733 | Msa0315380:CDS | 40.0% | |
| TTTGTTGGAGAATTGCCTTC+TGG | + | chr2_4:11683776-11683795 | Msa0315380:CDS | 40.0% | |
| GAATTGCCTTCTGGATCAAA+TGG | + | chr2_4:11683785-11683804 | Msa0315380:CDS | 40.0% | |
| AAACCACCATTTGATCCAGA+AGG | - | chr2_4:11683794-11683813 | None:intergenic | 40.0% | |
| ! | CCTACCAGATGATCCATTTT+TGG | - | chr2_4:11683821-11683840 | None:intergenic | 40.0% |
| CCAAAAATGGATCATCTGGT+AGG | + | chr2_4:11683818-11683837 | Msa0315380:intron | 40.0% | |
| AGCAAAGGGAGGTTACATTA+AGG | + | chr2_4:11684137-11684156 | Msa0315380:intron | 40.0% | |
| GCAAAGGGAGGTTACATTAA+GGG | + | chr2_4:11684138-11684157 | Msa0315380:intron | 40.0% | |
| GTGTTTAGTCCCTGCAAATA+GGG | + | chr2_4:11684197-11684216 | Msa0315380:intron | 40.0% | |
| TGTTTAGTCCCTGCAAATAG+GGG | + | chr2_4:11684198-11684217 | Msa0315380:intron | 40.0% | |
| TGCCAGGATTAACGAATACA+CGG | - | chr2_4:11684240-11684259 | None:intergenic | 40.0% | |
| !! | TGATGTGGCACTGATTAACT+GGG | - | chr2_4:11684308-11684327 | None:intergenic | 40.0% |
| ACATCAGCTAATCAGTGATG+TGG | - | chr2_4:11684323-11684342 | None:intergenic | 40.0% | |
| AAAGGAAGAAGATGAAGCCA+GGG | - | chr2_4:11684369-11684388 | None:intergenic | 40.0% | |
| AAAAGGAAGAAGATGAAGCC+AGG | - | chr2_4:11684370-11684389 | None:intergenic | 40.0% | |
| GAATTTGCAAGGAAAGGAGA+GGG | - | chr2_4:11684393-11684412 | None:intergenic | 40.0% | |
| TGAATTTGCAAGGAAAGGAG+AGG | - | chr2_4:11684394-11684413 | None:intergenic | 40.0% | |
| CTATGGTAAAGTTGTGTTGC+TGG | - | chr2_4:11684442-11684461 | None:intergenic | 40.0% | |
| GAGTGATGTGTCTAATGGAA+AGG | - | chr2_4:11684525-11684544 | None:intergenic | 40.0% | |
| GGAAAGCTACAAATCAGAAG+AGG | + | chr2_4:11684589-11684608 | Msa0315380:intron | 40.0% | |
| !!! | GCCCAAGTTTGTTGTGTTTT+GGG | - | chr2_4:11684695-11684714 | None:intergenic | 40.0% |
| !!! | TGCCCAAGTTTGTTGTGTTT+TGG | - | chr2_4:11684696-11684715 | None:intergenic | 40.0% |
| ! | GGAGGGAAAGCTAAAGTTTT+GGG | - | chr2_4:11684886-11684905 | None:intergenic | 40.0% |
| ! | TGGAGGGAAAGCTAAAGTTT+TGG | - | chr2_4:11684887-11684906 | None:intergenic | 40.0% |
| !! | AATAGTGTCGACAGTAACAG+AGG | - | chr2_4:11685079-11685098 | None:intergenic | 40.0% |
| AAAGAGAGAGAGAAGAGAGA+AGG | - | chr2_4:11685130-11685149 | None:intergenic | 40.0% | |
| ! | CTCTCTTCTCTCTCTCTTTT+CGG | + | chr2_4:11685131-11685150 | Msa0315380:intron | 40.0% |
| ! | TCTCTGCTCGTATTGTTGTT+GGG | + | chr2_4:11685254-11685273 | Msa0315380:intron | 40.0% |
| ! | TGAGTTGGCAGTGATTAAGT+TGG | + | chr2_4:11685368-11685387 | Msa0315380:intron | 40.0% |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | + | chr2_4:11685375-11685394 | Msa0315380:intron | 40.0% |
| ! | ATGTGATACTGTGATTGGTC+CGG | + | chr2_4:11685732-11685751 | Msa0315380:intron | 40.0% |
| TGGAGAGATAAAAATGAGGG+CGG | - | chr2_4:11685873-11685892 | None:intergenic | 40.0% | |
| ! | TTATCTGGAACTCTTGCACT+TGG | + | chr2_4:11686283-11686302 | Msa0315380:intron | 40.0% |
| CCATAGCTCGTTTCTTTGTA+AGG | - | chr2_4:11686321-11686340 | None:intergenic | 40.0% | |
| CCTTACAAAGAAACGAGCTA+TGG | + | chr2_4:11686318-11686337 | Msa0315380:CDS | 40.0% | |
| ATGTACTCAGTGACTTCAAC+TGG | + | chr2_4:11686415-11686434 | Msa0315380:CDS | 40.0% | |
| GGGGCTTATAAAAAAAGGAC+AGG | - | chr2_4:11686520-11686539 | None:intergenic | 40.0% | |
| TCTTGGAATAGGAGAAGTTG+AGG | - | chr2_4:11686750-11686769 | None:intergenic | 40.0% | |
| TCCTATTCCAAGAGACTTAG+TGG | + | chr2_4:11686757-11686776 | Msa0315380:intron | 40.0% | |
| TCCACTAAGTCTCTTGGAAT+AGG | - | chr2_4:11686761-11686780 | None:intergenic | 40.0% | |
| !! | CAAGAAGCATCGTAGAAAAG+AGG | - | chr2_4:11686950-11686969 | None:intergenic | 40.0% |
| ! | GTATCAAAAGCATACATCGG+AGG | - | chr2_4:11687060-11687079 | None:intergenic | 40.0% |
| ! | GATGTATGCTTTTGATACCC+AGG | + | chr2_4:11687062-11687081 | Msa0315380:CDS | 40.0% |
| ! | ACCCAGGAATTTTCTGAACA+AGG | + | chr2_4:11687078-11687097 | Msa0315380:CDS | 40.0% |
| GACCTTGTTCAGAAAATTCC+TGG | - | chr2_4:11687083-11687102 | None:intergenic | 40.0% | |
| AAGAGATTATGACGATCAGC+AGG | - | chr2_4:11687156-11687175 | None:intergenic | 40.0% | |
| ! | TCACTGTTTCTTGAGTATGG+TGG | - | chr2_4:11687290-11687309 | None:intergenic | 40.0% |
| ! | TACACAAAGATTGGTACTGG+TGG | + | chr2_4:11687420-11687439 | Msa0315380:CDS | 40.0% |
| TACTGGTGGCTATAGTTCTT+TGG | + | chr2_4:11687434-11687453 | Msa0315380:CDS | 40.0% | |
| GATTGGTATAGGATGTGCTT+CGG | - | chr2_4:11687592-11687611 | None:intergenic | 40.0% | |
| GCAACCTTGAAGAAAGAACG+AGG | - | chr2_4:11681228-11681247 | None:intergenic | 45.0% | |
| TACGAGTCCTGAGAATGCAA+CGG | + | chr2_4:11681609-11681628 | Msa0315380:intron | 45.0% | |
| AGTATTTGTAGCTGCGTGTG+GGG | + | chr2_4:11681699-11681718 | Msa0315380:intron | 45.0% | |
| ! | GCACCAGATTTAAAACTCCC+TGG | + | chr2_4:11681930-11681949 | Msa0315380:intron | 45.0% |
| CAAAAGGCCCATTAGTCGTT+CGG | - | chr2_4:11682041-11682060 | None:intergenic | 45.0% | |
| ACAATCACGCTTTCGGTTAC+TGG | - | chr2_4:11682428-11682447 | None:intergenic | 45.0% | |
| AAACTACACGAGCTGGACTT+GGG | - | chr2_4:11682525-11682544 | None:intergenic | 45.0% | |
| AACAGCAGTAATAGTGGTGC+TGG | + | chr2_4:11682586-11682605 | Msa0315380:CDS | 45.0% | |
| GGTAATTGAGGAGGAAGTCT+TGG | - | chr2_4:11682640-11682659 | None:intergenic | 45.0% | |
| GTATCAGGTGGTAATTGAGG+AGG | - | chr2_4:11682649-11682668 | None:intergenic | 45.0% | |
| !!! | CGTCTAGTTTTGCAGGTACA+TGG | - | chr2_4:11682690-11682709 | None:intergenic | 45.0% |
| ! | AGGAAGCTTTTACTCATGCG+TGG | + | chr2_4:11682746-11682765 | Msa0315380:CDS | 45.0% |
| ! | AGCTTTTACTCATGCGTGGT+CGG | + | chr2_4:11682750-11682769 | Msa0315380:CDS | 45.0% |
| CTTATGCCAGTTAGCCAACA+TGG | + | chr2_4:11682805-11682824 | Msa0315380:CDS | 45.0% | |
| ! | TCAGTTCCATGTTGGCTAAC+TGG | - | chr2_4:11682814-11682833 | None:intergenic | 45.0% |
| GTTAGCCAACATGGAACTGA+CGG | + | chr2_4:11682814-11682833 | Msa0315380:CDS | 45.0% | |
| TTAGCCAACATGGAACTGAC+GGG | + | chr2_4:11682815-11682834 | Msa0315380:CDS | 45.0% | |
| TGATGAAGTTGTTGCCGAAG+CGG | + | chr2_4:11682897-11682916 | Msa0315380:CDS | 45.0% | |
| !!! | ACTACAATACGGGTTTTGGG+AGG | + | chr2_4:11682985-11683004 | Msa0315380:CDS | 45.0% |
| !!! | CTACAATACGGGTTTTGGGA+GGG | + | chr2_4:11682986-11683005 | Msa0315380:CDS | 45.0% |
| GTGCATATCATCTAAGTGGC+GGG | + | chr2_4:11683016-11683035 | Msa0315380:CDS | 45.0% | |
| TGCATATCATCTAAGTGGCG+GGG | + | chr2_4:11683017-11683036 | Msa0315380:CDS | 45.0% | |
| GGAACGAACATAACTCATGC+AGG | + | chr2_4:11683045-11683064 | Msa0315380:CDS | 45.0% | |
| ATTGAACTCGAGCTGCAATG+TGG | - | chr2_4:11683232-11683251 | None:intergenic | 45.0% | |
| GGAACTAGTCCTTCAACCTT+TGG | - | chr2_4:11683330-11683349 | None:intergenic | 45.0% | |
| !! | TTTTTAGTCGCTTTCAGGCG+TGG | + | chr2_4:11683487-11683506 | Msa0315380:intron | 45.0% |
| ACTAATTGCAGCCCTGATTC+TGG | + | chr2_4:11683563-11683582 | Msa0315380:intron | 45.0% | |
| CCACTAAACTGTCCAGAATC+AGG | - | chr2_4:11683578-11683597 | None:intergenic | 45.0% | |
| CCTGATTCTGGACAGTTTAG+TGG | + | chr2_4:11683575-11683594 | Msa0315380:CDS | 45.0% | |
| CTCAAAGTATGGCTTCAGAG+TGG | + | chr2_4:11683647-11683666 | Msa0315380:CDS | 45.0% | |
| TTGCCTTCTGGATCAAATGG+TGG | + | chr2_4:11683788-11683807 | Msa0315380:CDS | 45.0% | |
| TGGTGGTTTCAGCCCAAAAA+TGG | + | chr2_4:11683805-11683824 | Msa0315380:intron | 45.0% | |
| CAGCCCAAAAATGGATCATC+TGG | + | chr2_4:11683814-11683833 | Msa0315380:intron | 45.0% | |
| TGGTTAGATATAGGGACGGA+GGG | - | chr2_4:11683892-11683911 | None:intergenic | 45.0% | |
| TGGGTGGTTAGATATAGGGA+CGG | - | chr2_4:11683896-11683915 | None:intergenic | 45.0% | |
| AGGGAGGTTACATTAAGGGA+CGG | + | chr2_4:11684142-11684161 | Msa0315380:intron | 45.0% | |
| AGGTTACATTAAGGGACGGA+GGG | + | chr2_4:11684146-11684165 | Msa0315380:intron | 45.0% | |
| CGTGTTTAGTCCCTGCAAAT+AGG | + | chr2_4:11684196-11684215 | Msa0315380:intron | 45.0% | |
| GTCCGTGTATTCGTTAATCC+TGG | + | chr2_4:11684235-11684254 | Msa0315380:intron | 45.0% | |
| !! | GCACTGATTAACTGGGTTGA+AGG | - | chr2_4:11684301-11684320 | None:intergenic | 45.0% |
| !! | GTGATGTGGCACTGATTAAC+TGG | - | chr2_4:11684309-11684328 | None:intergenic | 45.0% |
| CAGAAAGACCAAAATACCCC+TGG | + | chr2_4:11684349-11684368 | Msa0315380:intron | 45.0% | |
| !!! | AGATGAAGCCAGGGGTATTT+TGG | - | chr2_4:11684360-11684379 | None:intergenic | 45.0% |
| AAGGAAGAAGATGAAGCCAG+GGG | - | chr2_4:11684368-11684387 | None:intergenic | 45.0% | |
| GCAGGTGAATTTGCAAGGAA+AGG | - | chr2_4:11684399-11684418 | None:intergenic | 45.0% | |
| GAGTTGCAGGTGAATTTGCA+AGG | - | chr2_4:11684404-11684423 | None:intergenic | 45.0% | |
| TGTTGCTGGGAGAAGAACAA+GGG | - | chr2_4:11684428-11684447 | None:intergenic | 45.0% | |
| CAGTGGAGTGATGTGTCTAA+TGG | - | chr2_4:11684530-11684549 | None:intergenic | 45.0% | |
| GGTTTGACTCTCATCAAGTG+TGG | - | chr2_4:11684674-11684693 | None:intergenic | 45.0% | |
| ! | AACAGTGCTATTGGTGTGAG+TGG | - | chr2_4:11684805-11684824 | None:intergenic | 45.0% |
| !! | AACTTTAGCTTTCCCTCCAC+CGG | + | chr2_4:11684888-11684907 | Msa0315380:intron | 45.0% |
| TCGGAATAACCCAATATGGC+AGG | - | chr2_4:11685009-11685028 | None:intergenic | 45.0% | |
| TCGGTCGGAATAACCCAATA+TGG | - | chr2_4:11685013-11685032 | None:intergenic | 45.0% | |
| CTCTCTGCTCGTATTGTTGT+TGG | + | chr2_4:11685253-11685272 | Msa0315380:intron | 45.0% | |
| ! | TCGTATTGTTGTTGGGAGAG+AGG | + | chr2_4:11685261-11685280 | Msa0315380:intron | 45.0% |
| ! | TATTGTTGTTGGGAGAGAGG+AGG | + | chr2_4:11685264-11685283 | Msa0315380:intron | 45.0% |
| ! | ATTGTTGTTGGGAGAGAGGA+GGG | + | chr2_4:11685265-11685284 | Msa0315380:intron | 45.0% |
| ACTTGACTGCTCATCCATCT+AGG | - | chr2_4:11685312-11685331 | None:intergenic | 45.0% | |
| CAATGCAAGGGTAAATTGCC+AGG | + | chr2_4:11685419-11685438 | Msa0315380:intron | 45.0% | |
| ! | TTGCCAGGATTAGCGATTAC+AGG | + | chr2_4:11685434-11685453 | Msa0315380:intron | 45.0% |
| ! | TGCCAGGATTAGCGATTACA+GGG | + | chr2_4:11685435-11685454 | Msa0315380:intron | 45.0% |
| GAGTTTCAGATGAAAGAGGG+AGG | - | chr2_4:11686208-11686227 | None:intergenic | 45.0% | |
| AGTAAGCAATTTCAGGAGCC+AGG | - | chr2_4:11686441-11686460 | None:intergenic | 45.0% | |
| TCTGAACAAGGTCATGATGG+AGG | + | chr2_4:11687090-11687109 | Msa0315380:CDS | 45.0% | |
| AAGAATGACTCCACAGTCTC+AGG | - | chr2_4:11687183-11687202 | None:intergenic | 45.0% | |
| ACAGATATCGTGAATGGGGT+TGG | + | chr2_4:11687373-11687392 | Msa0315380:intron | 45.0% | |
| GGATAGCTCCCATATTCCAT+TGG | + | chr2_4:11687548-11687567 | Msa0315380:CDS | 45.0% | |
| !! | ATATATATATATATATTTAG+GGG | + | chr2_4:11686704-11686723 | Msa0315380:intron | 5.0% |
| ! | TCTGGAGTAGGGTAGAGACT+TGG | - | chr2_4:11681172-11681191 | None:intergenic | 50.0% |
| GAAAGAACGAGGGCGAAACT+TGG | - | chr2_4:11681217-11681236 | None:intergenic | 50.0% | |
| TCGCCCTCGTTCTTTCTTCA+AGG | + | chr2_4:11681221-11681240 | Msa0315380:CDS | 50.0% | |
| ! | CGCTTTTGCGACAGATATGC+AGG | - | chr2_4:11681528-11681547 | None:intergenic | 50.0% |
| TACCACCACCGAACGACTAA+TGG | + | chr2_4:11682030-11682049 | Msa0315380:intron | 50.0% | |
| ACCACCACCGAACGACTAAT+GGG | + | chr2_4:11682031-11682050 | Msa0315380:intron | 50.0% | |
| TTGGGCTATGTGTCAGCACA+AGG | - | chr2_4:11682507-11682526 | None:intergenic | 50.0% | |
| GAAACTACACGAGCTGGACT+TGG | - | chr2_4:11682526-11682545 | None:intergenic | 50.0% | |
| TCTCGAGAAACTACACGAGC+TGG | - | chr2_4:11682532-11682551 | None:intergenic | 50.0% | |
| ! | GCTTTTACTCATGCGTGGTC+GGG | + | chr2_4:11682751-11682770 | Msa0315380:CDS | 50.0% |
| !! | CAACATGGAACTGACGGGTT+GGG | + | chr2_4:11682820-11682839 | Msa0315380:CDS | 50.0% |
| !! | AACATGGAACTGACGGGTTG+GGG | + | chr2_4:11682821-11682840 | Msa0315380:CDS | 50.0% |
| GATGAAGTTGTTGCCGAAGC+GGG | + | chr2_4:11682898-11682917 | Msa0315380:CDS | 50.0% | |
| GTGGTTAGATATAGGGACGG+AGG | - | chr2_4:11683893-11683912 | None:intergenic | 50.0% | |
| GAGGTTACATTAAGGGACGG+AGG | + | chr2_4:11684145-11684164 | Msa0315380:intron | 50.0% | |
| TTTGGGAGGGCAAAATTGCC+AGG | - | chr2_4:11684256-11684275 | None:intergenic | 50.0% | |
| GCAAGGAAAGGAGAGGGAAA+AGG | - | chr2_4:11684387-11684406 | None:intergenic | 50.0% | |
| TTGCTGGGAGAAGAACAAGG+GGG | - | chr2_4:11684426-11684445 | None:intergenic | 50.0% | |
| GTTGCTGGGAGAAGAACAAG+GGG | - | chr2_4:11684427-11684446 | None:intergenic | 50.0% | |
| ! | GTGTTGCTGGGAGAAGAACA+AGG | - | chr2_4:11684429-11684448 | None:intergenic | 50.0% |
| GTTAACCGCGGTGGTGAAAA+CGG | - | chr2_4:11684772-11684791 | None:intergenic | 50.0% | |
| ! | GTTTTCACCACCGCGGTTAA+CGG | + | chr2_4:11684771-11684790 | Msa0315380:intron | 50.0% |
| ! | AGTGCTATTGGTGTGAGTGG+CGG | - | chr2_4:11684802-11684821 | None:intergenic | 50.0% |
| TGAAGAAAGTCGCCAGAGCA+AGG | - | chr2_4:11684920-11684939 | None:intergenic | 50.0% | |
| TCAGAGCAACAAACGCAGCA+AGG | - | chr2_4:11684963-11684982 | None:intergenic | 50.0% | |
| !!! | CTGAGTTTTTTCCACCACCG+CGG | + | chr2_4:11684979-11684998 | Msa0315380:intron | 50.0% |
| !! | AGTGTCGACAGTAACAGAGG+AGG | - | chr2_4:11685076-11685095 | None:intergenic | 50.0% |
| GGAAAGGGCGAAAGAGGAAA+GGG | - | chr2_4:11685199-11685218 | None:intergenic | 50.0% | |
| AGGAAAGGGCGAAAGAGGAA+AGG | - | chr2_4:11685200-11685219 | None:intergenic | 50.0% | |
| AAGGAAGGAAAGGGCGAAAG+AGG | - | chr2_4:11685205-11685224 | None:intergenic | 50.0% | |
| ! | TTGTTGTTGGGAGAGAGGAG+GGG | + | chr2_4:11685266-11685285 | Msa0315380:intron | 50.0% |
| TGTCCATTCCCATGCCTAGA+TGG | + | chr2_4:11685295-11685314 | Msa0315380:intron | 50.0% | |
| CATCCATCTAGGCATGGGAA+TGG | - | chr2_4:11685301-11685320 | None:intergenic | 50.0% | |
| CTGCTCATCCATCTAGGCAT+GGG | - | chr2_4:11685306-11685325 | None:intergenic | 50.0% | |
| ACTGCTCATCCATCTAGGCA+TGG | - | chr2_4:11685307-11685326 | None:intergenic | 50.0% | |
| GTCCCTGTAATCGCTAATCC+TGG | - | chr2_4:11685440-11685459 | None:intergenic | 50.0% | |
| !! | CTTGCACTTGGTGCCACTAA+AGG | + | chr2_4:11686295-11686314 | Msa0315380:intron | 50.0% |
| TCTCTTGAGACCTGAGACTG+TGG | + | chr2_4:11687170-11687189 | Msa0315380:CDS | 50.0% | |
| AAGGCCCATTAGTCGTTCGG+TGG | - | chr2_4:11682038-11682057 | None:intergenic | 55.0% | |
| CACGCTTTCGGTTACTGGTG+AGG | - | chr2_4:11682423-11682442 | None:intergenic | 55.0% | |
| CCAACCCGTCAGTTCCATGT+TGG | - | chr2_4:11682822-11682841 | None:intergenic | 55.0% | |
| ! | CCAACATGGAACTGACGGGT+TGG | + | chr2_4:11682819-11682838 | Msa0315380:CDS | 55.0% |
| !! | ACATGGAACTGACGGGTTGG+GGG | + | chr2_4:11682822-11682841 | Msa0315380:CDS | 55.0% |
| GTTGGGGGGATTAGGTGCTA+CGG | + | chr2_4:11682837-11682856 | Msa0315380:CDS | 55.0% | |
| ! | GGGATTAGGTGCTACGGTAG+TGG | + | chr2_4:11682843-11682862 | Msa0315380:CDS | 55.0% |
| TTCAACCCACGATCCCGCTT+CGG | - | chr2_4:11682914-11682933 | None:intergenic | 55.0% | |
| ! | CATCTAAGTGGCGGGGAACA+AGG | + | chr2_4:11683024-11683043 | Msa0315380:CDS | 55.0% |
| GAAGAACAAGGGGGAGTTGC+AGG | - | chr2_4:11684417-11684436 | None:intergenic | 55.0% | |
| GTGGTCGTGAGTGAAGTGTG+TGG | - | chr2_4:11684750-11684769 | None:intergenic | 55.0% | |
| GCAAGGTAGTTTCCGGTGGA+GGG | - | chr2_4:11684903-11684922 | None:intergenic | 55.0% | |
| AGCAAGGTAGTTTCCGGTGG+AGG | - | chr2_4:11684904-11684923 | None:intergenic | 55.0% | |
| CAGAGCAAGGTAGTTTCCGG+TGG | - | chr2_4:11684907-11684926 | None:intergenic | 55.0% | |
| CACCGGAAACTACCTTGCTC+TGG | + | chr2_4:11684905-11684924 | Msa0315380:intron | 55.0% | |
| CGCCAGAGCAAGGTAGTTTC+CGG | - | chr2_4:11684910-11684929 | None:intergenic | 55.0% | |
| ATTCCGACCGACATGAACGC+CGG | + | chr2_4:11685022-11685041 | Msa0315380:intron | 55.0% | |
| GAAAGAGGAAAGGGAAGGGG+CGG | - | chr2_4:11685190-11685209 | None:intergenic | 55.0% | |
| GGCGAAAGAGGAAAGGGAAG+GGG | - | chr2_4:11685193-11685212 | None:intergenic | 55.0% | |
| GGGCGAAAGAGGAAAGGGAA+GGG | - | chr2_4:11685194-11685213 | None:intergenic | 55.0% | |
| AGGGCGAAAGAGGAAAGGGA+AGG | - | chr2_4:11685195-11685214 | None:intergenic | 55.0% | |
| CTCAGTGACTTCAACTGGCC+TGG | + | chr2_4:11686420-11686439 | Msa0315380:CDS | 55.0% | |
| ! | GCCCATTAGTCGTTCGGTGG+TGG | - | chr2_4:11682035-11682054 | None:intergenic | 60.0% |
| !! | CATGGAACTGACGGGTTGGG+GGG | + | chr2_4:11682823-11682842 | Msa0315380:CDS | 60.0% |
| !! | ACTGACGGGTTGGGGGGATT+AGG | + | chr2_4:11682829-11682848 | Msa0315380:CDS | 60.0% |
| TTGTTGCCGAAGCGGGATCG+TGG | + | chr2_4:11682905-11682924 | Msa0315380:CDS | 60.0% | |
| TGTTGCCGAAGCGGGATCGT+GGG | + | chr2_4:11682906-11682925 | Msa0315380:CDS | 60.0% | |
| TCGTCAGCGCATAACGCTCC+TGG | + | chr2_4:11683180-11683199 | Msa0315380:CDS | 60.0% | |
| TCAGCGCATAACGCTCCTGG+TGG | + | chr2_4:11683183-11683202 | Msa0315380:CDS | 60.0% | |
| ! | GACGTGCTACTCAGTCCACC+AGG | - | chr2_4:11683201-11683220 | None:intergenic | 60.0% |
| ! | GACCACCGTTTTCACCACCG+CGG | + | chr2_4:11684764-11684783 | Msa0315380:intron | 60.0% |
| AACCGCGGTGGTGAAAACGG+TGG | - | chr2_4:11684769-11684788 | None:intergenic | 60.0% | |
| TTCACCACCGCGGTTAACGG+CGG | + | chr2_4:11684774-11684793 | Msa0315380:intron | 60.0% | |
| CCAATATGGCAGGTTCGCCG+CGG | - | chr2_4:11684999-11685018 | None:intergenic | 60.0% | |
| CGCGGCGAACCTGCCATATT+GGG | + | chr2_4:11684997-11685016 | Msa0315380:intron | 60.0% | |
| ACCGCCATGGGAGAGAGGTT+GGG | - | chr2_4:11685048-11685067 | None:intergenic | 60.0% | |
| AAACCACCGCCATGGGAGAG+AGG | - | chr2_4:11685053-11685072 | None:intergenic | 60.0% | |
| GAGGAGGAAACCACCGCCAT+GGG | - | chr2_4:11685060-11685079 | None:intergenic | 60.0% | |
| AGAGGAGGAAACCACCGCCA+TGG | - | chr2_4:11685061-11685080 | None:intergenic | 60.0% | |
| ATATGGCAGGTTCGCCGCGG+TGG | - | chr2_4:11684996-11685015 | None:intergenic | 65.0% | |
| CCGCGGCGAACCTGCCATAT+TGG | + | chr2_4:11684996-11685015 | Msa0315380:intron | 65.0% | |
| GGTTGGGCCGGCGTTCATGT+CGG | - | chr2_4:11685032-11685051 | None:intergenic | 65.0% | |
| CCATGGGAGAGAGGTTGGGC+CGG | - | chr2_4:11685044-11685063 | None:intergenic | 65.0% | |
| GCCCAACCTCTCTCCCATGG+CGG | + | chr2_4:11685044-11685063 | Msa0315380:intron | 65.0% | |
| CACCGCCATGGGAGAGAGGT+TGG | - | chr2_4:11685049-11685068 | None:intergenic | 65.0% | |
| CAACCTCTCTCCCATGGCGG+TGG | + | chr2_4:11685047-11685066 | Msa0315380:intron | 65.0% | |
| GGGCCGGCGTTCATGTCGGT+CGG | - | chr2_4:11685028-11685047 | None:intergenic | 70.0% | |
| CCGGCCCAACCTCTCTCCCA+TGG | + | chr2_4:11685041-11685060 | Msa0315380:intron | 70.0% | |
| GGAAAGGGAAGGGGCGGTGC+CGG | - | chr2_4:11685184-11685203 | None:intergenic | 70.0% | |
| TGGCAGGTTCGCCGCGGTGG+TGG | - | chr2_4:11684993-11685012 | None:intergenic | 75.0% | |
| ! | GGCGCCGCCGTTAACCGCGG+TGG | - | chr2_4:11684781-11684800 | None:intergenic | 80.0% |
| ! | GGCGGCGCCGCCGTTAACCG+CGG | - | chr2_4:11684784-11684803 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 11681165 | 11687626 | 11681165 | ID=Msa0315380;Name=Msa0315380 |
| chr2_4 | mRNA | 11681165 | 11687626 | 11681165 | ID=Msa0315380-mRNA-1;Parent=Msa0315380;Name=Msa0315380-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0.8|0.83|6|0|617 |
| chr2_4 | exon | 11681165 | 11681242 | 11681165 | ID=Msa0315380-mRNA-1:exon:4485;Parent=Msa0315380-mRNA-1 |
| chr2_4 | exon | 11682403 | 11683361 | 11682403 | ID=Msa0315380-mRNA-1:exon:4486;Parent=Msa0315380-mRNA-1 |
| chr2_4 | exon | 11683574 | 11683809 | 11683574 | ID=Msa0315380-mRNA-1:exon:4487;Parent=Msa0315380-mRNA-1 |
| chr2_4 | exon | 11686317 | 11686471 | 11686317 | ID=Msa0315380-mRNA-1:exon:4488;Parent=Msa0315380-mRNA-1 |
| chr2_4 | exon | 11687057 | 11687232 | 11687057 | ID=Msa0315380-mRNA-1:exon:4489;Parent=Msa0315380-mRNA-1 |
| chr2_4 | exon | 11687377 | 11687626 | 11687377 | ID=Msa0315380-mRNA-1:exon:4490;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11681165 | 11681242 | 11681165 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11682403 | 11683361 | 11682403 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11683574 | 11683809 | 11683574 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11686317 | 11686471 | 11686317 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11687057 | 11687232 | 11687057 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| chr2_4 | CDS | 11687377 | 11687626 | 11687377 | ID=Msa0315380-mRNA-1:cds;Parent=Msa0315380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
