Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043330 | XP_003618299.1 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043330 | sp|Q0WUU6|PLT4_ARATH | 70.857 | 525 | 141 | 4 | 5 | 525 | 7 | 523 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043330 | G7KIS7 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1043330 | 0.823837 | 1.116934e-53 | -8.615850e-47 |
| Msa0002710 | Msa1043330 | 0.810246 | 1.267748e-50 | -8.615850e-47 |
| Msa0003630 | Msa1043330 | 0.800118 | 1.674334e-48 | -8.615850e-47 |
| Msa0012710 | Msa1043330 | 0.800326 | 1.519127e-48 | -8.615850e-47 |
| Msa0012940 | Msa1043330 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0015670 | Msa1043330 | 0.809170 | 2.160320e-50 | -8.615850e-47 |
| Msa0043500 | Msa1043330 | 0.809319 | 2.006264e-50 | -8.615850e-47 |
| Msa0043650 | Msa1043330 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0045550 | Msa1043330 | 0.802916 | 4.469505e-49 | -8.615850e-47 |
| Msa0061500 | Msa1043330 | 0.800818 | 1.205598e-48 | -8.615850e-47 |
| Msa0081650 | Msa1043330 | 0.812852 | 3.441060e-51 | -8.615850e-47 |
| Msa0092410 | Msa1043330 | 0.837504 | 5.000479e-57 | -8.615850e-47 |
| Msa0103250 | Msa1043330 | 0.806287 | 8.852950e-50 | -8.615850e-47 |
| Msa0106620 | Msa1043330 | 0.864994 | 8.144954e-65 | -8.615850e-47 |
| Msa0106710 | Msa1043330 | 0.848491 | 5.925147e-60 | -8.615850e-47 |
| Msa0112270 | Msa1043330 | 0.851073 | 1.125404e-60 | -8.615850e-47 |
| Msa0116790 | Msa1043330 | 0.832462 | 9.324343e-56 | -8.615850e-47 |
| Msa0616450 | Msa1043330 | 0.807471 | 4.974147e-50 | -8.615850e-47 |
| Msa0619420 | Msa1043330 | 0.821814 | 3.304721e-53 | -8.615850e-47 |
| Msa0626270 | Msa1043330 | 0.819560 | 1.089244e-52 | -8.615850e-47 |
| Msa0630940 | Msa1043330 | 0.833090 | 6.509562e-56 | -8.615850e-47 |
| Msa0655920 | Msa1043330 | 0.810797 | 9.640310e-51 | -8.615850e-47 |
| Msa0658590 | Msa1043330 | 0.801518 | 8.670304e-49 | -8.615850e-47 |
| Msa0662940 | Msa1043330 | 0.992369 | 7.059651e-193 | -8.615850e-47 |
| Msa0663270 | Msa1043330 | 0.811165 | 8.022783e-51 | -8.615850e-47 |
| Msa0664090 | Msa1043330 | 0.800840 | 1.193494e-48 | -8.615850e-47 |
| Msa0664540 | Msa1043330 | 0.831410 | 1.695615e-55 | -8.615850e-47 |
| Msa0669180 | Msa1043330 | 0.824988 | 5.987463e-54 | -8.615850e-47 |
| Msa0692880 | Msa1043330 | 0.819866 | 9.273082e-53 | -8.615850e-47 |
| Msa0698100 | Msa1043330 | 0.825036 | 5.833671e-54 | -8.615850e-47 |
| Msa0705990 | Msa1043330 | 0.803408 | 3.536718e-49 | -8.615850e-47 |
| Msa0708310 | Msa1043330 | 0.809409 | 1.919694e-50 | -8.615850e-47 |
| Msa0709120 | Msa1043330 | 0.802391 | 5.736022e-49 | -8.615850e-47 |
| Msa0713680 | Msa1043330 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0750250 | Msa1043330 | 0.826831 | 2.186546e-54 | -8.615850e-47 |
| Msa0750810 | Msa1043330 | 0.804324 | 2.281090e-49 | -8.615850e-47 |
| Msa0779260 | Msa1043330 | 0.815746 | 7.894753e-52 | -8.615850e-47 |
| Msa0795070 | Msa1043330 | 0.800005 | 1.765712e-48 | -8.615850e-47 |
| Msa0139670 | Msa1043330 | 0.802740 | 4.860409e-49 | -8.615850e-47 |
| Msa0141400 | Msa1043330 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0152560 | Msa1043330 | 0.814594 | 1.422677e-51 | -8.615850e-47 |
| Msa0162690 | Msa1043330 | 0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0168870 | Msa1043330 | 0.802410 | 5.684849e-49 | -8.615850e-47 |
| Msa0187030 | Msa1043330 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
| Msa0187830 | Msa1043330 | 0.833056 | 6.637628e-56 | -8.615850e-47 |
| Msa0194890 | Msa1043330 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0205010 | Msa1043330 | 0.805258 | 1.456184e-49 | -8.615850e-47 |
| Msa0220730 | Msa1043330 | 0.826393 | 2.781070e-54 | -8.615850e-47 |
| Msa0225670 | Msa1043330 | 0.803379 | 3.586154e-49 | -8.615850e-47 |
| Msa0229920 | Msa1043330 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
| Msa0237210 | Msa1043330 | 0.800176 | 1.629655e-48 | -8.615850e-47 |
| Msa0378970 | Msa1043330 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0389910 | Msa1043330 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0422180 | Msa1043330 | 0.806943 | 6.435101e-50 | -8.615850e-47 |
| Msa0476680 | Msa1043330 | 0.802384 | 5.756618e-49 | -8.615850e-47 |
| Msa1003340 | Msa1043330 | 0.843511 | 1.339658e-58 | -8.615850e-47 |
| Msa1006810 | Msa1043330 | 0.806972 | 6.344315e-50 | -8.615850e-47 |
| Msa1034500 | Msa1043330 | 0.816390 | 5.668284e-52 | -8.615850e-47 |
| Msa1034700 | Msa1043330 | 0.822141 | 2.776644e-53 | -8.615850e-47 |
| Msa1043330 | Msa1046440 | 0.836400 | 9.567666e-57 | -8.615850e-47 |
| Msa1043330 | Msa1063420 | 0.801078 | 1.066657e-48 | -8.615850e-47 |
| Msa1043330 | Msa1088410 | 0.815563 | 8.668723e-52 | -8.615850e-47 |
| Msa1043330 | Msa1089450 | 0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa1043330 | Msa1108720 | 0.805747 | 1.149720e-49 | -8.615850e-47 |
| Msa1043330 | Msa1127590 | 0.804773 | 1.839184e-49 | -8.615850e-47 |
| Msa1043330 | Msa1143020 | 0.811157 | 8.056167e-51 | -8.615850e-47 |
| Msa1043330 | Msa1145810 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa1043330 | Msa1152410 | 0.806221 | 9.140795e-50 | -8.615850e-47 |
| Msa1043330 | Msa1162080 | 0.803908 | 2.785321e-49 | -8.615850e-47 |
| Msa1043330 | Msa1163880 | 0.811605 | 6.439663e-51 | -8.615850e-47 |
| Msa1043330 | Msa1219000 | 0.805180 | 1.511688e-49 | -8.615850e-47 |
| Msa1043330 | Msa1226470 | 0.805737 | 1.155204e-49 | -8.615850e-47 |
| Msa1043330 | Msa1234620 | 0.800960 | 1.127551e-48 | -8.615850e-47 |
| Msa1043330 | Msa1262010 | 0.817904 | 2.589447e-52 | -8.615850e-47 |
| Msa1043330 | Msa1266330 | 0.809841 | 1.550192e-50 | -8.615850e-47 |
| Msa1043330 | Msa1277080 | 0.809576 | 1.767020e-50 | -8.615850e-47 |
| Msa1043330 | Msa1334400 | 0.806895 | 6.586825e-50 | -8.615850e-47 |
| Msa1043330 | Msa1335160 | 0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa1043330 | Msa1340200 | 0.806162 | 9.403231e-50 | -8.615850e-47 |
| Msa1043330 | Msa1353890 | 0.808335 | 3.258012e-50 | -8.615850e-47 |
| Msa1043330 | Msa1354200 | 0.806623 | 7.518841e-50 | -8.615850e-47 |
| Msa1043330 | Msa1360420 | 0.804705 | 1.900317e-49 | -8.615850e-47 |
| Msa1043330 | Msa1365610 | 0.802013 | 6.860564e-49 | -8.615850e-47 |
| Msa1043330 | Msa1366550 | 0.823260 | 1.523967e-53 | -8.615850e-47 |
| Msa1043330 | Msa1370590 | 0.817001 | 4.135282e-52 | -8.615850e-47 |
| Msa1043330 | Msa1372280 | 0.810425 | 1.159963e-50 | -8.615850e-47 |
| Msa1043330 | Msa1384100 | 0.817260 | 3.615623e-52 | -8.615850e-47 |
| Msa1043330 | Msa1393840 | -0.819480 | 1.136353e-52 | -8.615850e-47 |
| Msa1043330 | Msa1408050 | 0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa1043330 | Msa1410420 | 0.828011 | 1.139705e-54 | -8.615850e-47 |
| Msa1043330 | Msa1424630 | 0.829692 | 4.464088e-55 | -8.615850e-47 |
| Msa1043330 | Msa1424980 | 0.801891 | 7.268800e-49 | -8.615850e-47 |
| Msa1043330 | Msa1430550 | 0.836128 | 1.121765e-56 | -8.615850e-47 |
| Msa1043330 | Msa1432130 | 0.812219 | 4.733575e-51 | -8.615850e-47 |
| Msa1043330 | Msa1444120 | 0.822199 | 2.692053e-53 | -8.615850e-47 |
| Msa1043330 | Msa1447180 | 0.803988 | 2.679917e-49 | -8.615850e-47 |
| Msa1043330 | Msa1454530 | 0.823095 | 1.665804e-53 | -8.615850e-47 |
| Msa1043330 | Msa1461540 | 0.802208 | 6.257743e-49 | -8.615850e-47 |
| Msa1043330 | Msa1462360 | 0.814422 | 1.553587e-51 | -8.615850e-47 |
| Msa1043330 | Msa1463030 | 0.822563 | 2.215925e-53 | -8.615850e-47 |
| Msa0240270 | Msa1043330 | 0.805748 | 1.149239e-49 | -8.615850e-47 |
| Msa0240900 | Msa1043330 | 0.802973 | 4.350581e-49 | -8.615850e-47 |
| Msa0261170 | Msa1043330 | 0.813377 | 2.639214e-51 | -8.615850e-47 |
| Msa0269560 | Msa1043330 | 0.834370 | 3.117237e-56 | -8.615850e-47 |
| Msa0279850 | Msa1043330 | 0.820036 | 8.478771e-53 | -8.615850e-47 |
| Msa0315380 | Msa1043330 | 0.800661 | 1.298161e-48 | -8.615850e-47 |
| Msa0315690 | Msa1043330 | 0.801764 | 7.719374e-49 | -8.615850e-47 |
| Msa0317970 | Msa1043330 | 0.822580 | 2.195105e-53 | -8.615850e-47 |
| Msa0321690 | Msa1043330 | 0.810566 | 1.081382e-50 | -8.615850e-47 |
| Msa0322900 | Msa1043330 | 0.838393 | 2.953967e-57 | -8.615850e-47 |
| Msa0341690 | Msa1043330 | 0.800545 | 1.370739e-48 | -8.615850e-47 |
| Msa0482940 | Msa1043330 | 0.819414 | 1.176106e-52 | -8.615850e-47 |
| Msa0485240 | Msa1043330 | 0.801219 | 9.984916e-49 | -8.615850e-47 |
| Msa0514610 | Msa1043330 | 0.814893 | 1.221892e-51 | -8.615850e-47 |
| Msa0518030 | Msa1043330 | 0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0521010 | Msa1043330 | 0.807279 | 5.462152e-50 | -8.615850e-47 |
| Msa0521670 | Msa1043330 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
| Msa0527820 | Msa1043330 | 0.807970 | 3.896811e-50 | -8.615850e-47 |
| Msa0534400 | Msa1043330 | 0.821099 | 4.833440e-53 | -8.615850e-47 |
| Msa0542470 | Msa1043330 | 0.976823 | 1.435835e-142 | -8.615850e-47 |
| Msa0556010 | Msa1043330 | 0.814323 | 1.633244e-51 | -8.615850e-47 |
| Msa0569780 | Msa1043330 | 0.808566 | 2.908043e-50 | -8.615850e-47 |
| Msa0572750 | Msa1043330 | 0.819326 | 1.231799e-52 | -8.615850e-47 |
| Msa0581690 | Msa1043330 | 0.813443 | 2.553180e-51 | -8.615850e-47 |
| Msa0582480 | Msa1043330 | 0.803659 | 3.137183e-49 | -8.615850e-47 |
| Msa0586220 | Msa1043330 | 0.807191 | 5.701109e-50 | -8.615850e-47 |
| Msa0590640 | Msa1043330 | 0.807228 | 5.601508e-50 | -8.615850e-47 |
| Msa0597770 | Msa1043330 | 0.826677 | 2.378500e-54 | -8.615850e-47 |
| Msa0598520 | Msa1043330 | 0.972914 | 1.501391e-135 | -8.615850e-47 |
| Msa0849440 | Msa1043330 | 0.801976 | 6.984269e-49 | -8.615850e-47 |
| Msa0865970 | Msa1043330 | 0.804165 | 2.462891e-49 | -8.615850e-47 |
| Msa0870650 | Msa1043330 | 0.800473 | 1.417535e-48 | -8.615850e-47 |
| Msa0902830 | Msa1043330 | 0.819684 | 1.020823e-52 | -8.615850e-47 |
| Msa0903780 | Msa1043330 | 0.810318 | 1.223570e-50 | -8.615850e-47 |
| Msa0933760 | Msa1043330 | 0.812662 | 3.787889e-51 | -8.615850e-47 |
| Msa0934140 | Msa1043330 | 0.821046 | 4.972450e-53 | -8.615850e-47 |
| Msa0936390 | Msa1043330 | 0.803211 | 3.884316e-49 | -8.615850e-47 |
| Msa0971650 | Msa1043330 | 0.812324 | 4.489852e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043330 | MtrunA17_Chr4g0021771 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Msa1043330 | MtrunA17_Chr2g0282031 | 66.027 | 521 | 172 | 1 | 4 | 524 | 7 | 522 | 0.0 | 700 |
| Msa1043330 | MtrunA17_Chr4g0034681 | 47.929 | 507 | 243 | 6 | 41 | 527 | 12 | 517 | 2.28e-165 | 479 |
| Msa1043330 | MtrunA17_Chr3g0144361 | 49.896 | 481 | 221 | 4 | 42 | 502 | 11 | 491 | 3.07e-165 | 478 |
| Msa1043330 | MtrunA17_Chr6g0485661 | 47.660 | 470 | 241 | 2 | 30 | 494 | 33 | 502 | 2.21e-162 | 471 |
| Msa1043330 | MtrunA17_Chr4g0036021 | 47.162 | 511 | 248 | 6 | 36 | 529 | 13 | 518 | 1.18e-161 | 469 |
| Msa1043330 | MtrunA17_Chr8g0390521 | 46.996 | 466 | 239 | 5 | 45 | 502 | 6 | 471 | 2.56e-151 | 442 |
| Msa1043330 | MtrunA17_Chr8g0373531 | 44.400 | 500 | 262 | 5 | 38 | 521 | 2 | 501 | 4.45e-149 | 437 |
| Msa1043330 | MtrunA17_Chr5g0432581 | 45.122 | 492 | 251 | 6 | 41 | 515 | 5 | 494 | 8.76e-146 | 428 |
| Msa1043330 | MtrunA17_Chr5g0403831 | 38.494 | 478 | 277 | 3 | 49 | 509 | 25 | 502 | 2.12e-112 | 343 |
| Msa1043330 | MtrunA17_Chr7g0250881 | 34.221 | 488 | 296 | 10 | 18 | 499 | 31 | 499 | 1.24e-73 | 242 |
| Msa1043330 | MtrunA17_Chr1g0213611 | 32.900 | 462 | 293 | 5 | 54 | 505 | 77 | 531 | 3.76e-73 | 242 |
| Msa1043330 | MtrunA17_Chr6g0457781 | 33.874 | 493 | 303 | 10 | 18 | 505 | 71 | 545 | 6.96e-72 | 239 |
| Msa1043330 | MtrunA17_Chr1g0213631 | 34.694 | 441 | 270 | 5 | 74 | 505 | 4 | 435 | 8.52e-72 | 236 |
| Msa1043330 | MtrunA17_Chr7g0214451 | 32.484 | 471 | 297 | 8 | 46 | 505 | 22 | 482 | 7.10e-71 | 235 |
| Msa1043330 | MtrunA17_Chr4g0032021 | 32.017 | 481 | 286 | 9 | 45 | 499 | 86 | 551 | 9.90e-69 | 231 |
| Msa1043330 | MtrunA17_Chr4g0039651 | 28.994 | 507 | 318 | 12 | 17 | 499 | 9 | 497 | 5.18e-66 | 222 |
| Msa1043330 | MtrunA17_Chr8g0373181 | 32.237 | 456 | 278 | 9 | 55 | 499 | 47 | 482 | 3.56e-64 | 217 |
| Msa1043330 | MtrunA17_Chr7g0273281 | 31.062 | 499 | 286 | 12 | 28 | 500 | 27 | 493 | 4.01e-64 | 217 |
| Msa1043330 | MtrunA17_Chr1g0155221 | 30.258 | 466 | 283 | 8 | 55 | 503 | 49 | 489 | 1.49e-59 | 204 |
| Msa1043330 | MtrunA17_Chr7g0259471 | 29.630 | 486 | 311 | 11 | 21 | 499 | 9 | 470 | 4.01e-58 | 200 |
| Msa1043330 | MtrunA17_Chr4g0066581 | 30.738 | 488 | 315 | 8 | 19 | 499 | 12 | 483 | 6.25e-58 | 200 |
| Msa1043330 | MtrunA17_Chr2g0286721 | 29.857 | 489 | 315 | 9 | 19 | 499 | 12 | 480 | 1.46e-56 | 196 |
| Msa1043330 | MtrunA17_Chr7g0259221 | 29.498 | 478 | 300 | 11 | 28 | 499 | 26 | 472 | 2.65e-55 | 193 |
| Msa1043330 | MtrunA17_Chr8g0373191 | 28.571 | 504 | 296 | 11 | 16 | 502 | 1 | 457 | 3.85e-54 | 189 |
| Msa1043330 | MtrunA17_Chr1g0205671 | 27.049 | 488 | 317 | 8 | 55 | 514 | 23 | 499 | 5.21e-52 | 184 |
| Msa1043330 | MtrunA17_Chr2g0290181 | 32.791 | 369 | 221 | 7 | 42 | 391 | 6 | 366 | 2.83e-51 | 184 |
| Msa1043330 | MtrunA17_Chr2g0290181 | 41.304 | 92 | 54 | 0 | 413 | 504 | 467 | 558 | 1.49e-14 | 76.3 |
| Msa1043330 | MtrunA17_Chr1g0205681 | 27.835 | 485 | 309 | 9 | 51 | 506 | 20 | 492 | 4.74e-51 | 182 |
| Msa1043330 | MtrunA17_Chr3g0115781 | 26.349 | 482 | 309 | 12 | 55 | 505 | 26 | 492 | 6.48e-51 | 182 |
| Msa1043330 | MtrunA17_Chr2g0303731 | 34.320 | 338 | 214 | 5 | 54 | 387 | 25 | 358 | 7.09e-51 | 183 |
| Msa1043330 | MtrunA17_Chr2g0303731 | 43.750 | 96 | 54 | 0 | 410 | 505 | 461 | 556 | 3.96e-17 | 84.7 |
| Msa1043330 | MtrunA17_Chr5g0420841 | 28.257 | 499 | 312 | 12 | 51 | 517 | 18 | 502 | 1.32e-50 | 181 |
| Msa1043330 | MtrunA17_Chr3g0078971 | 25.996 | 477 | 318 | 10 | 55 | 506 | 24 | 490 | 1.78e-50 | 181 |
| Msa1043330 | MtrunA17_Chr5g0394341 | 26.747 | 501 | 320 | 12 | 55 | 524 | 23 | 507 | 2.24e-50 | 181 |
| Msa1043330 | MtrunA17_Chr8g0390141 | 27.381 | 504 | 321 | 12 | 47 | 520 | 19 | 507 | 2.33e-50 | 180 |
| Msa1043330 | MtrunA17_Chr3g0119401 | 29.268 | 492 | 319 | 13 | 21 | 499 | 54 | 529 | 1.22e-49 | 179 |
| Msa1043330 | MtrunA17_Chr3g0115721 | 27.108 | 498 | 321 | 12 | 51 | 520 | 20 | 503 | 3.41e-49 | 177 |
| Msa1043330 | MtrunA17_Chr6g0486681 | 27.615 | 478 | 310 | 12 | 54 | 505 | 25 | 492 | 2.40e-48 | 175 |
| Msa1043330 | MtrunA17_Chr6g0486671 | 27.615 | 478 | 310 | 12 | 54 | 505 | 25 | 492 | 2.40e-48 | 175 |
| Msa1043330 | MtrunA17_Chr4g0065311 | 26.347 | 501 | 321 | 11 | 36 | 505 | 2 | 485 | 2.73e-48 | 174 |
| Msa1043330 | MtrunA17_Chr5g0417611 | 26.653 | 484 | 316 | 11 | 51 | 505 | 20 | 493 | 6.03e-48 | 174 |
| Msa1043330 | MtrunA17_Chr3g0085971 | 27.668 | 506 | 324 | 11 | 51 | 526 | 18 | 511 | 1.59e-47 | 172 |
| Msa1043330 | MtrunA17_Chr1g0205691 | 26.166 | 493 | 314 | 10 | 62 | 520 | 29 | 505 | 2.67e-47 | 172 |
| Msa1043330 | MtrunA17_Chr3g0115711 | 27.801 | 482 | 311 | 11 | 43 | 498 | 12 | 482 | 1.21e-46 | 170 |
| Msa1043330 | MtrunA17_Chr8g0390261 | 27.160 | 486 | 302 | 13 | 54 | 505 | 25 | 492 | 1.27e-46 | 170 |
| Msa1043330 | MtrunA17_Chr8g0376631 | 33.951 | 324 | 204 | 7 | 54 | 372 | 25 | 343 | 2.22e-46 | 171 |
| Msa1043330 | MtrunA17_Chr8g0376631 | 45.833 | 96 | 52 | 0 | 410 | 505 | 460 | 555 | 1.67e-17 | 85.9 |
| Msa1043330 | MtrunA17_Chr4g0048411 | 27.397 | 511 | 319 | 12 | 45 | 516 | 14 | 511 | 8.26e-46 | 168 |
| Msa1043330 | MtrunA17_Chr4g0048051 | 27.545 | 501 | 314 | 12 | 54 | 516 | 22 | 511 | 9.08e-46 | 167 |
| Msa1043330 | MtrunA17_Chr1g0164851 | 27.066 | 484 | 306 | 11 | 54 | 505 | 22 | 490 | 2.15e-45 | 167 |
| Msa1043330 | MtrunA17_Chr1g0164871 | 26.860 | 484 | 307 | 11 | 54 | 505 | 22 | 490 | 2.50e-45 | 166 |
| Msa1043330 | MtrunA17_Chr4g0065324 | 26.166 | 493 | 314 | 11 | 45 | 505 | 19 | 493 | 4.19e-45 | 166 |
| Msa1043330 | MtrunA17_Chr2g0303701 | 33.429 | 350 | 221 | 6 | 54 | 398 | 25 | 367 | 6.79e-45 | 166 |
| Msa1043330 | MtrunA17_Chr3g0115741 | 25.413 | 484 | 319 | 12 | 51 | 505 | 23 | 493 | 1.63e-44 | 164 |
| Msa1043330 | MtrunA17_Chr3g0121674 | 33.115 | 305 | 189 | 5 | 216 | 514 | 1 | 296 | 3.57e-44 | 158 |
| Msa1043330 | MtrunA17_Chr8g0376601 | 33.041 | 342 | 216 | 8 | 46 | 382 | 20 | 353 | 8.01e-44 | 163 |
| Msa1043330 | MtrunA17_Chr8g0376601 | 45.783 | 83 | 45 | 0 | 410 | 492 | 459 | 541 | 8.22e-13 | 70.9 |
| Msa1043330 | MtrunA17_Chr3g0128171 | 26.253 | 419 | 291 | 8 | 101 | 511 | 42 | 450 | 1.83e-43 | 160 |
| Msa1043330 | MtrunA17_Chr3g0078991 | 25.306 | 490 | 329 | 11 | 45 | 506 | 11 | 491 | 1.89e-43 | 161 |
| Msa1043330 | MtrunA17_Chr4g0004821 | 28.958 | 480 | 303 | 11 | 33 | 500 | 17 | 470 | 3.67e-43 | 160 |
| Msa1043330 | MtrunA17_Chr3g0115751 | 25.572 | 481 | 316 | 12 | 51 | 502 | 25 | 492 | 4.39e-43 | 160 |
| Msa1043330 | MtrunA17_Chr6g0486021 | 29.400 | 500 | 303 | 15 | 24 | 500 | 12 | 484 | 5.59e-42 | 157 |
| Msa1043330 | MtrunA17_Chr5g0445601 | 24.138 | 493 | 336 | 9 | 39 | 505 | 11 | 491 | 1.27e-41 | 156 |
| Msa1043330 | MtrunA17_Chr3g0078791 | 26.442 | 416 | 263 | 7 | 101 | 505 | 34 | 417 | 5.96e-41 | 153 |
| Msa1043330 | MtrunA17_Chr3g0128081 | 25.261 | 479 | 308 | 10 | 62 | 505 | 29 | 492 | 3.18e-40 | 152 |
| Msa1043330 | MtrunA17_Chr8g0376611 | 33.212 | 274 | 178 | 4 | 105 | 377 | 12 | 281 | 5.39e-40 | 151 |
| Msa1043330 | MtrunA17_Chr8g0376611 | 41.667 | 96 | 56 | 0 | 410 | 505 | 391 | 486 | 1.85e-16 | 82.0 |
| Msa1043330 | MtrunA17_Chr7g0257631 | 24.089 | 494 | 337 | 9 | 38 | 505 | 44 | 525 | 6.42e-39 | 149 |
| Msa1043330 | MtrunA17_Chr5g0437021 | 25.407 | 492 | 325 | 11 | 42 | 505 | 13 | 490 | 8.53e-38 | 145 |
| Msa1043330 | MtrunA17_Chr2g0290161 | 32.632 | 285 | 154 | 5 | 112 | 390 | 20 | 272 | 9.44e-36 | 139 |
| Msa1043330 | MtrunA17_Chr7g0273261 | 34.821 | 224 | 126 | 6 | 301 | 516 | 40 | 251 | 9.05e-33 | 125 |
| Msa1043330 | MtrunA17_Chr3g0144261 | 33.333 | 234 | 153 | 3 | 53 | 285 | 2 | 233 | 1.17e-32 | 132 |
| Msa1043330 | MtrunA17_Chr3g0144261 | 31.200 | 250 | 156 | 7 | 265 | 502 | 472 | 717 | 1.23e-21 | 99.0 |
| Msa1043330 | MtrunA17_Chr3g0115731 | 24.165 | 509 | 310 | 14 | 49 | 522 | 18 | 485 | 4.68e-32 | 129 |
| Msa1043330 | MtrunA17_Chr5g0407441 | 33.197 | 244 | 154 | 7 | 55 | 295 | 4 | 241 | 4.31e-30 | 125 |
| Msa1043330 | MtrunA17_Chr5g0407441 | 31.687 | 243 | 151 | 7 | 287 | 517 | 487 | 726 | 2.89e-19 | 91.7 |
| Msa1043330 | MtrunA17_Chr4g0065351 | 25.278 | 360 | 248 | 9 | 173 | 525 | 1 | 346 | 9.00e-29 | 117 |
| Msa1043330 | MtrunA17_Chr8g0370141 | 33.047 | 233 | 150 | 5 | 53 | 280 | 2 | 233 | 1.50e-28 | 117 |
| Msa1043330 | MtrunA17_Chr5g0404191 | 26.357 | 258 | 178 | 3 | 17 | 274 | 17 | 262 | 6.28e-28 | 113 |
| Msa1043330 | MtrunA17_Chr3g0146061 | 33.645 | 214 | 127 | 5 | 66 | 276 | 15 | 216 | 3.26e-27 | 116 |
| Msa1043330 | MtrunA17_Chr3g0146061 | 34.071 | 226 | 136 | 5 | 287 | 502 | 505 | 727 | 1.51e-23 | 105 |
| Msa1043330 | MtrunA17_Chr5g0419321 | 32.432 | 222 | 141 | 6 | 77 | 295 | 54 | 269 | 1.49e-25 | 111 |
| Msa1043330 | MtrunA17_Chr5g0419321 | 29.057 | 265 | 169 | 7 | 254 | 502 | 474 | 735 | 2.37e-19 | 92.0 |
| Msa1043330 | MtrunA17_Chr7g0273271 | 27.477 | 222 | 143 | 3 | 21 | 241 | 2 | 206 | 1.56e-20 | 90.1 |
| Msa1043330 | MtrunA17_Chr5g0434231 | 33.516 | 182 | 85 | 4 | 97 | 272 | 1 | 152 | 1.65e-20 | 88.2 |
| Msa1043330 | MtrunA17_Chr5g0404181 | 36.567 | 134 | 75 | 4 | 378 | 503 | 1 | 132 | 9.78e-18 | 79.7 |
| Msa1043330 | MtrunA17_Chr5g0434251 | 39.583 | 96 | 58 | 0 | 410 | 505 | 47 | 142 | 4.26e-17 | 78.6 |
| Msa1043330 | MtrunA17_Chr1g0186831 | 24.766 | 428 | 278 | 13 | 105 | 495 | 80 | 500 | 1.79e-16 | 82.4 |
| Msa1043330 | MtrunA17_Chr8g0370151 | 26.906 | 223 | 152 | 2 | 289 | 502 | 128 | 348 | 6.55e-15 | 76.3 |
| Msa1043330 | MtrunA17_Chr4g0042131 | 25.481 | 416 | 245 | 21 | 102 | 495 | 35 | 407 | 7.45e-13 | 70.5 |
| Msa1043330 | MtrunA17_Chr5g0434261 | 45.783 | 83 | 45 | 0 | 410 | 492 | 221 | 303 | 8.11e-13 | 69.7 |
| Msa1043330 | MtrunA17_Chr3g0120761 | 23.928 | 443 | 279 | 14 | 104 | 495 | 76 | 511 | 9.71e-13 | 70.5 |
| Msa1043330 | MtrunA17_Chr1g0183921 | 23.146 | 445 | 291 | 14 | 99 | 499 | 75 | 512 | 1.74e-12 | 69.7 |
| Msa1043330 | MtrunA17_Chr5g0446681 | 29.936 | 157 | 93 | 3 | 38 | 194 | 6 | 145 | 3.40e-12 | 67.4 |
| Msa1043330 | MtrunA17_Chr4g0000061 | 25.170 | 441 | 249 | 19 | 106 | 497 | 80 | 488 | 6.16e-12 | 67.8 |
| Msa1043330 | MtrunA17_Chr1g0186821 | 24.094 | 469 | 294 | 16 | 104 | 519 | 75 | 534 | 3.07e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043330 | AT2G20780.1 | 70.857 | 525 | 141 | 4 | 5 | 525 | 7 | 523 | 0.0 | 751 |
| Msa1043330 | AT2G20780.2 | 73.756 | 442 | 114 | 1 | 84 | 525 | 26 | 465 | 0.0 | 669 |
| Msa1043330 | AT3G18830.1 | 48.178 | 494 | 236 | 5 | 47 | 524 | 31 | 520 | 1.27e-161 | 470 |
| Msa1043330 | AT2G16120.1 | 47.368 | 494 | 239 | 4 | 45 | 517 | 16 | 509 | 3.11e-157 | 458 |
| Msa1043330 | AT2G16130.1 | 47.358 | 492 | 236 | 4 | 45 | 513 | 16 | 507 | 3.78e-156 | 455 |
| Msa1043330 | AT4G36670.1 | 46.737 | 475 | 238 | 4 | 46 | 505 | 8 | 482 | 3.60e-151 | 442 |
| Msa1043330 | AT2G18480.1 | 47.379 | 477 | 237 | 4 | 40 | 502 | 7 | 483 | 2.52e-149 | 438 |
| Msa1043330 | AT2G43330.1 | 32.406 | 503 | 316 | 9 | 37 | 526 | 16 | 507 | 3.01e-71 | 236 |
| Msa1043330 | AT5G17010.1 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa1043330 | AT5G17010.3 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa1043330 | AT5G17010.4 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa1043330 | AT5G16150.2 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa1043330 | AT5G16150.1 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa1043330 | AT5G16150.3 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa1043330 | AT1G75220.1 | 30.785 | 497 | 308 | 10 | 17 | 503 | 17 | 487 | 2.11e-65 | 220 |
| Msa1043330 | AT3G05150.1 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.83e-63 | 214 |
| Msa1043330 | AT3G05150.3 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.83e-63 | 214 |
| Msa1043330 | AT3G05150.2 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 2.29e-63 | 215 |
| Msa1043330 | AT1G19450.1 | 30.233 | 516 | 319 | 13 | 1 | 503 | 1 | 488 | 2.34e-63 | 215 |
| Msa1043330 | AT5G59250.1 | 30.595 | 487 | 307 | 10 | 34 | 499 | 77 | 553 | 3.05e-63 | 216 |
| Msa1043330 | AT1G08930.1 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 1.94e-62 | 213 |
| Msa1043330 | AT1G08930.2 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 1.94e-62 | 213 |
| Msa1043330 | AT3G03090.1 | 29.941 | 511 | 309 | 12 | 21 | 499 | 6 | 499 | 4.13e-61 | 209 |
| Msa1043330 | AT3G05165.3 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa1043330 | AT3G05165.2 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa1043330 | AT3G05165.1 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa1043330 | AT2G48020.2 | 30.947 | 475 | 294 | 9 | 31 | 499 | 12 | 458 | 9.99e-60 | 204 |
| Msa1043330 | AT2G48020.1 | 30.947 | 475 | 294 | 9 | 31 | 499 | 12 | 458 | 9.99e-60 | 204 |
| Msa1043330 | AT3G05160.1 | 28.723 | 470 | 299 | 9 | 40 | 499 | 8 | 451 | 4.71e-59 | 202 |
| Msa1043330 | AT5G18840.1 | 31.377 | 494 | 301 | 11 | 22 | 505 | 16 | 481 | 6.01e-59 | 203 |
| Msa1043330 | AT5G27350.1 | 29.873 | 472 | 293 | 12 | 43 | 500 | 15 | 462 | 1.56e-58 | 202 |
| Msa1043330 | AT5G27360.1 | 29.193 | 483 | 314 | 11 | 27 | 499 | 1 | 465 | 3.71e-58 | 201 |
| Msa1043330 | AT5G27360.3 | 29.193 | 483 | 314 | 11 | 27 | 499 | 49 | 513 | 1.32e-57 | 201 |
| Msa1043330 | AT1G54730.2 | 30.496 | 423 | 268 | 9 | 83 | 499 | 60 | 462 | 7.81e-57 | 197 |
| Msa1043330 | AT3G05155.1 | 30.149 | 471 | 280 | 11 | 45 | 499 | 18 | 455 | 2.26e-56 | 196 |
| Msa1043330 | AT4G04760.1 | 30.573 | 471 | 283 | 12 | 51 | 505 | 28 | 470 | 8.18e-56 | 194 |
| Msa1043330 | AT4G04760.3 | 31.019 | 432 | 265 | 9 | 85 | 505 | 2 | 411 | 2.51e-55 | 192 |
| Msa1043330 | AT3G05160.3 | 29.216 | 421 | 272 | 7 | 85 | 499 | 2 | 402 | 6.46e-55 | 190 |
| Msa1043330 | AT3G05160.2 | 29.216 | 421 | 272 | 7 | 85 | 499 | 2 | 402 | 6.46e-55 | 190 |
| Msa1043330 | AT5G26250.1 | 29.518 | 498 | 314 | 12 | 54 | 526 | 21 | 506 | 1.25e-54 | 192 |
| Msa1043330 | AT4G04750.3 | 28.355 | 529 | 329 | 15 | 3 | 505 | 14 | 518 | 1.41e-53 | 189 |
| Msa1043330 | AT4G04750.1 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 3.37e-53 | 187 |
| Msa1043330 | AT4G04750.2 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 3.37e-53 | 187 |
| Msa1043330 | AT3G19940.1 | 27.708 | 480 | 308 | 11 | 54 | 505 | 24 | 492 | 3.86e-52 | 186 |
| Msa1043330 | AT1G08900.5 | 30.404 | 421 | 271 | 8 | 83 | 499 | 11 | 413 | 4.50e-52 | 183 |
| Msa1043330 | AT1G08900.3 | 30.404 | 421 | 271 | 8 | 83 | 499 | 45 | 447 | 7.00e-52 | 183 |
| Msa1043330 | AT1G50310.1 | 27.140 | 479 | 313 | 11 | 54 | 505 | 24 | 493 | 8.11e-52 | 185 |
| Msa1043330 | AT1G08900.1 | 28.601 | 479 | 311 | 10 | 25 | 499 | 4 | 455 | 9.48e-52 | 183 |
| Msa1043330 | AT1G08900.2 | 28.601 | 479 | 311 | 10 | 25 | 499 | 4 | 455 | 9.48e-52 | 183 |
| Msa1043330 | AT1G08890.1 | 29.677 | 465 | 295 | 11 | 45 | 499 | 15 | 457 | 3.61e-51 | 182 |
| Msa1043330 | AT4G04760.2 | 29.336 | 467 | 291 | 12 | 51 | 505 | 28 | 467 | 3.76e-51 | 182 |
| Msa1043330 | AT3G05960.1 | 27.309 | 498 | 328 | 10 | 54 | 527 | 20 | 507 | 1.80e-50 | 181 |
| Msa1043330 | AT1G77210.2 | 27.203 | 522 | 319 | 20 | 35 | 520 | 8 | 504 | 2.23e-50 | 181 |
| Msa1043330 | AT1G77210.1 | 27.203 | 522 | 319 | 20 | 35 | 520 | 8 | 504 | 2.23e-50 | 181 |
| Msa1043330 | AT5G26340.1 | 27.000 | 500 | 324 | 10 | 55 | 525 | 24 | 511 | 3.15e-50 | 181 |
| Msa1043330 | AT1G08920.1 | 28.511 | 470 | 296 | 11 | 45 | 499 | 18 | 462 | 3.22e-49 | 176 |
| Msa1043330 | AT1G05030.1 | 30.159 | 441 | 295 | 7 | 62 | 500 | 86 | 515 | 5.53e-49 | 177 |
| Msa1043330 | AT3G05400.1 | 28.390 | 472 | 299 | 12 | 45 | 504 | 17 | 461 | 1.15e-48 | 175 |
| Msa1043330 | AT1G30220.1 | 33.435 | 329 | 211 | 5 | 54 | 378 | 27 | 351 | 1.53e-48 | 177 |
| Msa1043330 | AT1G30220.1 | 45.833 | 96 | 52 | 0 | 410 | 505 | 464 | 559 | 1.49e-18 | 89.4 |
| Msa1043330 | AT2G35740.1 | 32.353 | 340 | 211 | 7 | 54 | 382 | 25 | 356 | 5.65e-48 | 175 |
| Msa1043330 | AT2G35740.1 | 39.806 | 103 | 62 | 0 | 401 | 503 | 458 | 560 | 1.78e-17 | 85.9 |
| Msa1043330 | AT3G05165.6 | 27.523 | 436 | 287 | 7 | 31 | 456 | 2 | 418 | 7.64e-48 | 174 |
| Msa1043330 | AT4G02050.2 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 1.25e-47 | 173 |
| Msa1043330 | AT4G02050.1 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 1.25e-47 | 173 |
| Msa1043330 | AT3G05165.4 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.43e-47 | 172 |
| Msa1043330 | AT3G05165.5 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.43e-47 | 172 |
| Msa1043330 | AT4G16480.2 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa1043330 | AT4G16480.2 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa1043330 | AT4G16480.3 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa1043330 | AT4G16480.3 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa1043330 | AT4G16480.1 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa1043330 | AT4G16480.1 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa1043330 | AT1G67300.1 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 3.62e-47 | 171 |
| Msa1043330 | AT1G67300.3 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 3.62e-47 | 171 |
| Msa1043330 | AT1G54730.5 | 27.896 | 423 | 258 | 8 | 83 | 499 | 60 | 441 | 4.36e-47 | 170 |
| Msa1043330 | AT1G08920.2 | 28.059 | 474 | 300 | 11 | 45 | 499 | 18 | 469 | 5.53e-47 | 171 |
| Msa1043330 | AT1G67300.2 | 29.470 | 509 | 313 | 15 | 15 | 500 | 3 | 488 | 1.50e-46 | 170 |
| Msa1043330 | AT5G27360.2 | 31.081 | 370 | 233 | 9 | 134 | 499 | 10 | 361 | 1.56e-46 | 167 |
| Msa1043330 | AT5G27360.5 | 31.081 | 370 | 233 | 9 | 134 | 499 | 10 | 361 | 1.56e-46 | 167 |
| Msa1043330 | AT1G54730.3 | 29.474 | 380 | 243 | 8 | 83 | 456 | 60 | 420 | 5.47e-46 | 167 |
| Msa1043330 | AT3G19930.1 | 26.680 | 491 | 315 | 12 | 51 | 511 | 20 | 495 | 8.64e-46 | 168 |
| Msa1043330 | AT3G19930.2 | 26.680 | 491 | 315 | 12 | 51 | 511 | 20 | 495 | 8.64e-46 | 168 |
| Msa1043330 | AT1G11260.1 | 25.200 | 500 | 329 | 12 | 54 | 517 | 22 | 512 | 1.97e-45 | 167 |
| Msa1043330 | AT1G34580.1 | 26.978 | 493 | 311 | 13 | 51 | 509 | 21 | 498 | 2.60e-45 | 167 |
| Msa1043330 | AT5G23270.1 | 25.451 | 499 | 324 | 11 | 46 | 511 | 15 | 498 | 8.80e-45 | 165 |
| Msa1043330 | AT5G17010.2 | 27.033 | 492 | 247 | 11 | 40 | 499 | 25 | 436 | 4.47e-44 | 162 |
| Msa1043330 | AT1G05030.2 | 28.482 | 481 | 318 | 10 | 22 | 500 | 7 | 463 | 5.15e-44 | 162 |
| Msa1043330 | AT1G07340.1 | 27.389 | 471 | 303 | 10 | 55 | 498 | 23 | 481 | 8.22e-44 | 162 |
| Msa1043330 | AT1G34580.2 | 27.660 | 423 | 279 | 9 | 101 | 509 | 39 | 448 | 9.07e-44 | 161 |
| Msa1043330 | AT3G05400.2 | 27.331 | 472 | 284 | 13 | 45 | 504 | 17 | 441 | 3.80e-43 | 159 |
| Msa1043330 | AT4G21480.1 | 26.653 | 484 | 308 | 13 | 54 | 505 | 22 | 490 | 8.27e-43 | 160 |
| Msa1043330 | AT1G67300.4 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 3.74e-42 | 156 |
| Msa1043330 | AT1G67300.5 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 3.74e-42 | 156 |
| Msa1043330 | AT1G67300.6 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 4.91e-42 | 156 |
| Msa1043330 | AT1G67300.7 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 4.91e-42 | 156 |
| Msa1043330 | AT1G79820.2 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 1.70e-41 | 156 |
| Msa1043330 | AT1G79820.1 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 1.70e-41 | 156 |
| Msa1043330 | AT5G27360.4 | 27.251 | 422 | 280 | 10 | 27 | 438 | 1 | 405 | 4.79e-41 | 153 |
| Msa1043330 | AT3G20460.1 | 25.917 | 436 | 297 | 8 | 70 | 499 | 68 | 483 | 1.40e-40 | 153 |
| Msa1043330 | AT1G54730.9 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 3.59e-40 | 150 |
| Msa1043330 | AT1G54730.7 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 3.59e-40 | 150 |
| Msa1043330 | AT1G08900.4 | 28.307 | 378 | 250 | 7 | 83 | 456 | 53 | 413 | 1.32e-38 | 147 |
| Msa1043330 | AT1G08920.3 | 26.824 | 425 | 276 | 9 | 45 | 456 | 18 | 420 | 1.66e-38 | 147 |
| Msa1043330 | AT1G50310.2 | 27.666 | 347 | 235 | 9 | 166 | 505 | 13 | 350 | 2.07e-38 | 145 |
| Msa1043330 | AT1G54730.4 | 26.579 | 380 | 233 | 7 | 83 | 456 | 60 | 399 | 1.27e-36 | 140 |
| Msa1043330 | AT5G61520.1 | 25.673 | 483 | 317 | 10 | 54 | 505 | 23 | 494 | 2.30e-36 | 142 |
| Msa1043330 | AT1G79820.4 | 28.814 | 413 | 265 | 10 | 45 | 448 | 44 | 436 | 2.39e-36 | 140 |
| Msa1043330 | AT2G48020.4 | 28.011 | 357 | 229 | 6 | 54 | 404 | 33 | 367 | 3.54e-36 | 139 |
| Msa1043330 | AT2G48020.3 | 27.964 | 329 | 215 | 4 | 54 | 382 | 33 | 339 | 2.68e-35 | 135 |
| Msa1043330 | AT3G05155.2 | 28.955 | 335 | 204 | 7 | 45 | 372 | 18 | 325 | 3.43e-35 | 135 |
| Msa1043330 | AT1G77210.3 | 27.224 | 371 | 229 | 14 | 167 | 520 | 9 | 355 | 4.28e-35 | 135 |
| Msa1043330 | AT3G51490.2 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.59e-35 | 139 |
| Msa1043330 | AT3G51490.2 | 32.468 | 231 | 139 | 5 | 284 | 502 | 495 | 720 | 1.68e-21 | 99.0 |
| Msa1043330 | AT3G51490.1 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.76e-35 | 139 |
| Msa1043330 | AT3G51490.1 | 29.437 | 231 | 138 | 5 | 284 | 502 | 495 | 712 | 7.36e-19 | 90.9 |
| Msa1043330 | AT1G54730.11 | 28.947 | 304 | 196 | 6 | 69 | 372 | 50 | 333 | 4.84e-34 | 132 |
| Msa1043330 | AT5G61520.2 | 26.098 | 410 | 288 | 6 | 101 | 505 | 47 | 446 | 1.91e-33 | 133 |
| Msa1043330 | AT1G54730.8 | 26.420 | 352 | 213 | 8 | 83 | 428 | 60 | 371 | 6.15e-31 | 124 |
| Msa1043330 | AT1G20840.2 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 6.29e-31 | 127 |
| Msa1043330 | AT1G20840.2 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.13e-22 | 100 |
| Msa1043330 | AT1G20840.1 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 6.29e-31 | 127 |
| Msa1043330 | AT1G20840.1 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.13e-22 | 100 |
| Msa1043330 | AT1G54730.10 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 6.18e-30 | 120 |
| Msa1043330 | AT1G54730.6 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 6.18e-30 | 120 |
| Msa1043330 | AT3G51490.3 | 39.080 | 174 | 103 | 3 | 113 | 285 | 14 | 185 | 7.33e-27 | 115 |
| Msa1043330 | AT3G51490.3 | 32.468 | 231 | 139 | 5 | 284 | 502 | 445 | 670 | 1.88e-21 | 98.6 |
| Msa1043330 | AT4G35300.4 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.4 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.8 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.8 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.6 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.6 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.11 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.11 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.1 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.1 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.10 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.10 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.7 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa1043330 | AT4G35300.7 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa1043330 | AT4G35300.9 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa1043330 | AT4G35300.9 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa1043330 | AT4G35300.2 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa1043330 | AT4G35300.2 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa1043330 | AT4G35300.3 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa1043330 | AT4G35300.3 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa1043330 | AT1G79820.3 | 26.068 | 468 | 263 | 13 | 45 | 500 | 44 | 440 | 1.27e-25 | 110 |
| Msa1043330 | AT4G35300.5 | 32.751 | 229 | 133 | 6 | 288 | 502 | 308 | 529 | 5.70e-25 | 108 |
| Msa1043330 | AT5G43350.1 | 22.538 | 457 | 295 | 14 | 104 | 509 | 76 | 524 | 5.66e-14 | 74.7 |
| Msa1043330 | AT5G43340.1 | 23.165 | 436 | 291 | 14 | 105 | 505 | 82 | 508 | 4.81e-13 | 72.0 |
| Msa1043330 | AT2G38940.1 | 21.896 | 443 | 290 | 11 | 105 | 499 | 81 | 515 | 1.93e-12 | 70.1 |
| Msa1043330 | AT1G16370.1 | 25.450 | 444 | 262 | 20 | 91 | 510 | 116 | 514 | 7.46e-12 | 68.2 |
| Msa1043330 | AT3G54700.2 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 1.22e-11 | 67.4 |
| Msa1043330 | AT3G54700.1 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 1.22e-11 | 67.4 |
| Msa1043330 | AT1G79820.5 | 37.748 | 151 | 80 | 5 | 357 | 500 | 235 | 378 | 5.61e-11 | 65.1 |
Find 147 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGTCCTTTGAGATATT+TGG | 0.082116 | 7_2:+1554476 | Msa1043330:three_prime_UTR |
| CCAGCGGCCATTAAAATTTC+TGG | 0.104258 | 7_2:-1553562 | None:intergenic |
| ACTCTTTCATTATTTGAAAA+AGG | 0.131055 | 7_2:+1553748 | Msa1043330:CDS |
| TTGGACTCGGCCCTGTTTGC+TGG | 0.157878 | 7_2:+1553830 | Msa1043330:CDS |
| AACAAAGACCGTCTTTATTT+TGG | 0.178346 | 7_2:+1553633 | Msa1043330:CDS |
| TGTATCTCTATTGGGTAGTT+TGG | 0.222757 | 7_2:+1552895 | Msa1043330:CDS |
| CGAGAATTTGATATCTGATA+TGG | 0.240675 | 7_2:+1554303 | Msa1043330:three_prime_UTR |
| AAGGCCGGAAAACGCGTAAT+TGG | 0.248896 | 7_2:-1553185 | None:intergenic |
| TCTCTCAACAATGTTCTTCT+TGG | 0.260513 | 7_2:+1552541 | Msa1043330:CDS |
| ATTTCATGTAAGTCAATAAT+AGG | 0.272933 | 7_2:+1554409 | Msa1043330:three_prime_UTR |
| GCTGGAATTGGAATAGGTTT+TGG | 0.278916 | 7_2:+1553049 | Msa1043330:CDS |
| TTTGAGTATTGTATCTCTAT+TGG | 0.289099 | 7_2:+1552886 | Msa1043330:CDS |
| CAGATATTATTGGTAGAAAA+TGG | 0.294464 | 7_2:+1552933 | Msa1043330:CDS |
| TCTTATCTTCCAATTGTTGT+TGG | 0.306828 | 7_2:-1552474 | None:intergenic |
| AAGATGATGTTCCAAGAAAA+TGG | 0.307041 | 7_2:+1552352 | Msa1043330:exon |
| GACTGCTTGTTTGTTCTGTA+TGG | 0.317788 | 7_2:+1553720 | Msa1043330:CDS |
| CTTCGCCGGATGCTGATTAC+TGG | 0.318031 | 7_2:+1553481 | Msa1043330:CDS |
| GTATCTCTATTGGGTAGTTT+GGG | 0.319309 | 7_2:+1552896 | Msa1043330:CDS |
| CTTCTCATTACTAGCACAAT+TGG | 0.327974 | 7_2:+1553694 | Msa1043330:CDS |
| GTACTTGTTCTTTGTTCCTA+AGG | 0.334633 | 7_2:-1552404 | None:intergenic |
| GGAAGATTGTTAGCTGGAAT+TGG | 0.335016 | 7_2:+1553037 | Msa1043330:CDS |
| CCGATCTTGCTTCGTCAATT+CGG | 0.337686 | 7_2:-1553321 | None:intergenic |
| AATGGGGAAATGGGTTTATC+AGG | 0.344962 | 7_2:+1552376 | Msa1043330:CDS |
| TTGAGTATTGTATCTCTATT+GGG | 0.346213 | 7_2:+1552887 | Msa1043330:CDS |
| TTGTTAGCTGGAATTGGAAT+AGG | 0.355045 | 7_2:+1553043 | Msa1043330:CDS |
| AGAAAATGGTAATGGGGAAA+TGG | 0.358662 | 7_2:+1552366 | Msa1043330:CDS |
| CAACTTGTGCAGAACAAAAC+TGG | 0.362425 | 7_2:+1554144 | Msa1043330:CDS |
| TCATTGTAATTCCACCCATT+TGG | 0.368460 | 7_2:-1552982 | None:intergenic |
| TCTAAAGATAACTGAGGTTC+AGG | 0.370786 | 7_2:+1552844 | Msa1043330:CDS |
| GTCCTCGTATTTACCAGAAT+TGG | 0.372355 | 7_2:-1553419 | None:intergenic |
| TACTTTATCAATAAGAATAA+TGG | 0.372573 | 7_2:-1553659 | None:intergenic |
| CTCCGCCACCGGCGCTTCGC+CGG | 0.383124 | 7_2:+1553467 | Msa1043330:CDS |
| GTATCCAACGCAATTTCTTT+CGG | 0.383566 | 7_2:+1553961 | Msa1043330:CDS |
| TGAGAATGAACATGGGAGTC+AGG | 0.384972 | 7_2:+1554092 | Msa1043330:CDS |
| TGTTCCAAGAAAATGGTAAT+GGG | 0.389476 | 7_2:+1552359 | Msa1043330:CDS |
| GGGCCATTAGTGATTGCATT+AGG | 0.390751 | 7_2:+1553769 | Msa1043330:CDS |
| AATCCATCAGGGTCGTATAA+AGG | 0.392415 | 7_2:-1554194 | None:intergenic |
| CACTCGGAGCTGTAGCGAAT+AGG | 0.400992 | 7_2:+1553902 | Msa1043330:CDS |
| TGGACTCGGCCCTGTTTGCT+GGG | 0.402706 | 7_2:+1553831 | Msa1043330:CDS |
| GATGTCAAAACCCAGCAAAC+AGG | 0.402833 | 7_2:-1553841 | None:intergenic |
| ATCATTAGTACTTGATATGA+AGG | 0.422297 | 7_2:-1553013 | None:intergenic |
| GAAAATGGTAATGGGGAAAT+GGG | 0.424079 | 7_2:+1552367 | Msa1043330:CDS |
| ATACCTAATGCAATCACTAA+TGG | 0.428309 | 7_2:-1553772 | None:intergenic |
| GATATCTCAGCAATATATAT+AGG | 0.430921 | 7_2:-1553085 | None:intergenic |
| GGAAGAACATCAGATATTAT+TGG | 0.433859 | 7_2:+1552923 | Msa1043330:CDS |
| TACTTGTTCTTTGTTCCTAA+GGG | 0.434909 | 7_2:-1552403 | None:intergenic |
| AACAATGTTCTTCTTGGCTA+TGG | 0.435667 | 7_2:+1552547 | Msa1043330:CDS |
| ACTGCTTGTTTGTTCTGTAT+GGG | 0.446903 | 7_2:+1553721 | Msa1043330:CDS |
| ACACTAGTACCTGAAACAAA+AGG | 0.446951 | 7_2:+1554039 | Msa1043330:CDS |
| GGCTGCAGTTGTATTCCAAA+TGG | 0.451381 | 7_2:+1552967 | Msa1043330:CDS |
| CGGATGCTGATTACTGGTCT+TGG | 0.455359 | 7_2:+1553487 | Msa1043330:CDS |
| GCCTGAGCACGCACTCGTAA+AGG | 0.455930 | 7_2:-1553874 | None:intergenic |
| GCCTTTCGGTACACATAAGT+TGG | 0.456022 | 7_2:+1553203 | Msa1043330:CDS |
| CTGGAATGACAAAATCCATC+AGG | 0.456148 | 7_2:-1554206 | None:intergenic |
| AACAACAATTGGAAGATAAG+AGG | 0.456265 | 7_2:+1552476 | Msa1043330:CDS |
| AGTGAGCCTCTAGTGAGATT+TGG | 0.456475 | 7_2:-1553109 | None:intergenic |
| ACATGACTTGGCAACAATAG+AGG | 0.460226 | 7_2:-1552145 | None:intergenic |
| ACTCGGAGCTGTAGCGAATA+GGG | 0.461405 | 7_2:+1553903 | Msa1043330:CDS |
| CCCTTTACGAGTGCGTGCTC+AGG | 0.461504 | 7_2:+1553873 | Msa1043330:CDS |
| TTCTCATTACTAGCACAATT+GGG | 0.462959 | 7_2:+1553695 | Msa1043330:CDS |
| CGTGCTCAGGCATCTGCACT+CGG | 0.465823 | 7_2:+1553886 | Msa1043330:CDS |
| TCATATCAAGTACTAATGAT+TGG | 0.466636 | 7_2:+1553016 | Msa1043330:CDS |
| CCGAATTGACGAAGCAAGAT+CGG | 0.470119 | 7_2:+1553321 | Msa1043330:CDS |
| ATGTTCCAAGAAAATGGTAA+TGG | 0.470800 | 7_2:+1552358 | Msa1043330:CDS |
| AAGATAAGAGGAACAGTACT+AGG | 0.471084 | 7_2:+1552488 | Msa1043330:CDS |
| ATTATTCTTATTGATAAAGT+AGG | 0.477981 | 7_2:+1553661 | Msa1043330:CDS |
| ATCCGGCGAAGCGCCGGTGG+CGG | 0.482961 | 7_2:-1553469 | None:intergenic |
| CCTGAGCACGCACTCGTAAA+GGG | 0.483401 | 7_2:-1553873 | None:intergenic |
| AATTGAAATATATGTAGCTC+TGG | 0.483498 | 7_2:-1554225 | None:intergenic |
| GGTTTATCAGGAATTCCCTT+AGG | 0.485952 | 7_2:+1552388 | Msa1043330:CDS |
| CTATTGGGTAGTTTGGGTGG+TGG | 0.488972 | 7_2:+1552902 | Msa1043330:CDS |
| GAGGCTAGCAGAAATACAAC+AGG | 0.497842 | 7_2:+1553384 | Msa1043330:CDS |
| CATATGAATTACATCCCTCA+TGG | 0.499141 | 7_2:-1554539 | None:intergenic |
| ATCAGCATCCGGCGAAGCGC+CGG | 0.504116 | 7_2:-1553475 | None:intergenic |
| TCAAAGGACCATGTGGAGAC+AGG | 0.506999 | 7_2:-1554467 | None:intergenic |
| GAGAATTTGATATCTGATAT+GGG | 0.507816 | 7_2:+1554304 | Msa1043330:three_prime_UTR |
| CACTAGTACCTGAAACAAAA+GGG | 0.508537 | 7_2:+1554040 | Msa1043330:CDS |
| CAAACCTTTGTGTCTGAACA+AGG | 0.513720 | 7_2:-1552288 | None:intergenic |
| ACTCACATGGATATGATCTT+CGG | 0.514882 | 7_2:+1554275 | Msa1043330:three_prime_UTR |
| ATGAGAAAGAAGTGGAAGAG+AGG | 0.523249 | 7_2:+1553365 | Msa1043330:CDS |
| CAAGACCAGTAATCAGCATC+CGG | 0.526849 | 7_2:-1553486 | None:intergenic |
| ATGATTGGAAGATTGTTAGC+TGG | 0.528824 | 7_2:+1553031 | Msa1043330:CDS |
| ACTTATGTGTACCGAAAGGC+CGG | 0.528846 | 7_2:-1553200 | None:intergenic |
| TGAATTGCTCTCTCCGCCAC+CGG | 0.529504 | 7_2:+1553456 | Msa1043330:CDS |
| ATAAATGTAGGAATTATGCT+TGG | 0.533082 | 7_2:+1553154 | Msa1043330:CDS |
| CCAACGCAATTTCTTTCGGC+GGG | 0.535097 | 7_2:+1553965 | Msa1043330:CDS |
| GACGGTCTTTGTTATACCTA+CGG | 0.535206 | 7_2:-1553623 | None:intergenic |
| CAGGGAAAAGAGATGGAGCT+AGG | 0.539460 | 7_2:+1554111 | Msa1043330:CDS |
| CGCGGCTTTAATCACTCACA+TGG | 0.541974 | 7_2:+1554262 | Msa1043330:three_prime_UTR |
| GCTGCAGTTGTATTCCAAAT+GGG | 0.552850 | 7_2:+1552968 | Msa1043330:CDS |
| AGCATCCGGCGAAGCGCCGG+TGG | 0.553482 | 7_2:-1553472 | None:intergenic |
| ACCAACCATCTCGGCGACTC+AGG | 0.557547 | 7_2:-1553289 | None:intergenic |
| TCTCTATTGGGTAGTTTGGG+TGG | 0.559075 | 7_2:+1552899 | Msa1043330:CDS |
| GCAGAAATACAACAGGCTGC+TGG | 0.560147 | 7_2:+1553391 | Msa1043330:CDS |
| AAACGAAGATGAGAAAGAAG+TGG | 0.563366 | 7_2:+1553357 | Msa1043330:CDS |
| TGAAATTAAAGAACATGACT+TGG | 0.563646 | 7_2:-1552157 | None:intergenic |
| CAATTGTGCTAGTAATGAGA+AGG | 0.568147 | 7_2:-1553693 | None:intergenic |
| TCATTAGTACTTGATATGAA+GGG | 0.569168 | 7_2:-1553012 | None:intergenic |
| ACACCTTTATACGACCCTGA+TGG | 0.569736 | 7_2:+1554191 | Msa1043330:three_prime_UTR |
| TCCTGAGTCGCCGAGATGGT+TGG | 0.572336 | 7_2:+1553288 | Msa1043330:CDS |
| TGGGAGTCAGGGAAAAGAGA+TGG | 0.575169 | 7_2:+1554104 | Msa1043330:CDS |
| GTTGTTTCCAAATATCTCAA+AGG | 0.577067 | 7_2:-1554483 | None:intergenic |
| GAGAATGAACATGGGAGTCA+GGG | 0.577348 | 7_2:+1554093 | Msa1043330:CDS |
| TGGAGAGTAATGCTTGCTGT+TGG | 0.577364 | 7_2:+1553223 | Msa1043330:CDS |
| GAACAAAGAACAAGTACAAG+AGG | 0.581349 | 7_2:+1552410 | Msa1043330:CDS |
| CATGACTTGGCAACAATAGA+GGG | 0.582567 | 7_2:-1552144 | None:intergenic |
| AGAGAGCAATTCACGCCACA+CGG | 0.586023 | 7_2:-1553446 | None:intergenic |
| ATGTCAAAACCCAGCAAACA+GGG | 0.587235 | 7_2:-1553840 | None:intergenic |
| TTCTGCATTACCAACCATCT+CGG | 0.587579 | 7_2:-1553298 | None:intergenic |
| AAATTGCGTTGGATACAGAC+AGG | 0.590532 | 7_2:-1553954 | None:intergenic |
| TAGAAAATGGACAATGGCAT+TGG | 0.591364 | 7_2:+1552946 | Msa1043330:CDS |
| ACAGGAAAGACATGGCTACA+AGG | 0.594862 | 7_2:-1553936 | None:intergenic |
| ATAATAGGATTGTATATGAA+CGG | 0.595528 | 7_2:+1554424 | Msa1043330:three_prime_UTR |
| ACAACCTTGTTCAGACACAA+AGG | 0.595654 | 7_2:+1552284 | Msa1043330:five_prime_UTR |
| AATTGTGCTAGTAATGAGAA+GGG | 0.597166 | 7_2:-1553692 | None:intergenic |
| GCAGATGTGGGTGTGATGAG+TGG | 0.598876 | 7_2:+1552797 | Msa1043330:intron |
| TTATTCCTGAGTCGCCGAGA+TGG | 0.599472 | 7_2:+1553284 | Msa1043330:CDS |
| CCCGCCGAAAGAAATTGCGT+TGG | 0.604005 | 7_2:-1553965 | None:intergenic |
| CAATGGTTTAGAACTACAGA+AGG | 0.607868 | 7_2:-1552097 | None:intergenic |
| GAGATGATCCTGTCTCCACA+TGG | 0.609706 | 7_2:+1554459 | Msa1043330:three_prime_UTR |
| ATGATGTTTGAGAATGAACA+TGG | 0.614564 | 7_2:+1554084 | Msa1043330:CDS |
| TCCAACGCAATTTCTTTCGG+CGG | 0.616866 | 7_2:+1553964 | Msa1043330:CDS |
| CATTACAGTGTACTCCATGA+GGG | 0.620975 | 7_2:+1554525 | Msa1043330:three_prime_UTR |
| CATTAGTACTTGATATGAAG+GGG | 0.622524 | 7_2:-1553011 | None:intergenic |
| GCAAAACCAATGAACACTGA+AGG | 0.623428 | 7_2:-1553253 | None:intergenic |
| TGATTTATCTTCAATTCCAG+CGG | 0.623893 | 7_2:-1553578 | None:intergenic |
| GTTCCAAGAAAATGGTAATG+GGG | 0.628643 | 7_2:+1552360 | Msa1043330:CDS |
| AATGGCCACCAAAATAAAGA+CGG | 0.634627 | 7_2:-1553641 | None:intergenic |
| GCAGTTGTATTCCAAATGGG+TGG | 0.636411 | 7_2:+1552971 | Msa1043330:CDS |
| TGCCAATTCTGGTAAATACG+AGG | 0.640126 | 7_2:+1553417 | Msa1043330:CDS |
| ATATCACCAAATCTCACTAG+AGG | 0.642480 | 7_2:+1553103 | Msa1043330:CDS |
| CTAGCTGCTACTGTTGCCGT+AGG | 0.648188 | 7_2:+1553607 | Msa1043330:CDS |
| TATTGGTAGAAAATGGACAA+TGG | 0.649056 | 7_2:+1552940 | Msa1043330:CDS |
| ATCAGGGTCGTATAAAGGTG+TGG | 0.650273 | 7_2:-1554189 | None:intergenic |
| GAGAGCAATTCACGCCACAC+GGG | 0.655886 | 7_2:-1553445 | None:intergenic |
| TAGTGTGAAAACAAAGACAA+TGG | 0.657278 | 7_2:-1554022 | None:intergenic |
| AAATATCTCAAAGGACCATG+TGG | 0.659478 | 7_2:-1554474 | None:intergenic |
| TCATTACAGTGTACTCCATG+AGG | 0.660152 | 7_2:+1554524 | Msa1043330:three_prime_UTR |
| TGGAATGACAAAATCCATCA+GGG | 0.662835 | 7_2:-1554205 | None:intergenic |
| CATGTGAGTGATTAAAGCCG+CGG | 0.666934 | 7_2:-1554261 | None:intergenic |
| ATTGTGCTAGTAATGAGAAG+GGG | 0.672038 | 7_2:-1553691 | None:intergenic |
| TCCAACTTATGTGTACCGAA+AGG | 0.681195 | 7_2:-1553204 | None:intergenic |
| GTAGCGAATAGGGTTTGCAG+CGG | 0.685373 | 7_2:+1553913 | Msa1043330:CDS |
| AGAAGATCTAAAGATAACTG+AGG | 0.686492 | 7_2:+1552838 | Msa1043330:CDS |
| GGATACAGACAGGAAAGACA+TGG | 0.687845 | 7_2:-1553944 | None:intergenic |
| TGATGTTTGAGAATGAACAT+GGG | 0.695121 | 7_2:+1554085 | Msa1043330:CDS |
| AATACGAGGACAAACCCGTG+TGG | 0.757333 | 7_2:+1553431 | Msa1043330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAATAGTCAAGT+TGG | + | chr7_2:1552067-1552086 | Msa1043330:five_prime_UTR | 15.0% |
| !! | AAAAAAATAATAGTCAAGTT+GGG | + | chr7_2:1552068-1552087 | Msa1043330:five_prime_UTR | 15.0% |
| !!! | TTTTATTGAGATGATTTTTA+CGG | + | chr7_2:1552752-1552771 | Msa1043330:intron | 15.0% |
| !! | TACTTTATCAATAAGAATAA+TGG | - | chr7_2:1553662-1553681 | None:intergenic | 15.0% |
| !! | ATTATTCTTATTGATAAAGT+AGG | + | chr7_2:1553661-1553680 | Msa1043330:CDS | 15.0% |
| !!! | TGTGTATGTGTTATTAATTA+TGG | + | chr7_2:1552726-1552745 | Msa1043330:intron | 20.0% |
| !!! | GTGTATGTGTTATTAATTAT+GGG | + | chr7_2:1552727-1552746 | Msa1043330:intron | 20.0% |
| !!! | TTTATTGAGATGATTTTTAC+GGG | + | chr7_2:1552753-1552772 | Msa1043330:intron | 20.0% |
| !! | ACTCTTTCATTATTTGAAAA+AGG | + | chr7_2:1553748-1553767 | Msa1043330:CDS | 20.0% |
| !! | CTCTTTCATTATTTGAAAAA+GGG | + | chr7_2:1553749-1553768 | Msa1043330:CDS | 20.0% |
| !! | ATTTCATGTAAGTCAATAAT+AGG | + | chr7_2:1554409-1554428 | Msa1043330:three_prime_UTR | 20.0% |
| !! | ATAATAGGATTGTATATGAA+CGG | + | chr7_2:1554424-1554443 | Msa1043330:three_prime_UTR | 20.0% |
| ! | TGAAATTAAAGAACATGACT+TGG | - | chr7_2:1552160-1552179 | None:intergenic | 25.0% |
| !!! | TGTTTATTTTTGTGTTTGGT+TGG | - | chr7_2:1552267-1552286 | None:intergenic | 25.0% |
| !!! | AGGTTGTTTATTTTTGTGTT+TGG | - | chr7_2:1552271-1552290 | None:intergenic | 25.0% |
| !! | TTTGAGTATTGTATCTCTAT+TGG | + | chr7_2:1552886-1552905 | Msa1043330:CDS | 25.0% |
| !! | TTGAGTATTGTATCTCTATT+GGG | + | chr7_2:1552887-1552906 | Msa1043330:CDS | 25.0% |
| ! | CAGATATTATTGGTAGAAAA+TGG | + | chr7_2:1552933-1552952 | Msa1043330:CDS | 25.0% |
| ! | TCATTAGTACTTGATATGAA+GGG | - | chr7_2:1553015-1553034 | None:intergenic | 25.0% |
| ! | ATCATTAGTACTTGATATGA+AGG | - | chr7_2:1553016-1553035 | None:intergenic | 25.0% |
| ! | TCATATCAAGTACTAATGAT+TGG | + | chr7_2:1553016-1553035 | Msa1043330:CDS | 25.0% |
| ! | GATATCTCAGCAATATATAT+AGG | - | chr7_2:1553088-1553107 | None:intergenic | 25.0% |
| ! | CCTACATTTATAAAAATCTC+TGG | - | chr7_2:1553145-1553164 | None:intergenic | 25.0% |
| !! | CCAGAGATTTTTATAAATGT+AGG | + | chr7_2:1553142-1553161 | Msa1043330:CDS | 25.0% |
| ! | ATAAATGTAGGAATTATGCT+TGG | + | chr7_2:1553154-1553173 | Msa1043330:CDS | 25.0% |
| !! | TTACAGTCCAGAAATTTTAA+TGG | + | chr7_2:1553555-1553574 | Msa1043330:CDS | 25.0% |
| !!! | TGGAAATGTAGCATTTTTTT+CGG | + | chr7_2:1553807-1553826 | Msa1043330:CDS | 25.0% |
| ! | AATTGAAATATATGTAGCTC+TGG | - | chr7_2:1554228-1554247 | None:intergenic | 25.0% |
| ! | GAGAATTTGATATCTGATAT+GGG | + | chr7_2:1554304-1554323 | Msa1043330:three_prime_UTR | 25.0% |
| ! | AATCCAACATTCCATGTTTT+TGG | + | chr7_2:1552215-1552234 | Msa1043330:five_prime_UTR | 30.0% |
| ATCTTAGACTACCAAAAACA+TGG | - | chr7_2:1552229-1552248 | None:intergenic | 30.0% | |
| AAGATGATGTTCCAAGAAAA+TGG | + | chr7_2:1552352-1552371 | Msa1043330:exon | 30.0% | |
| ATGTTCCAAGAAAATGGTAA+TGG | + | chr7_2:1552358-1552377 | Msa1043330:CDS | 30.0% | |
| TGTTCCAAGAAAATGGTAAT+GGG | + | chr7_2:1552359-1552378 | Msa1043330:CDS | 30.0% | |
| TACTTGTTCTTTGTTCCTAA+GGG | - | chr7_2:1552406-1552425 | None:intergenic | 30.0% | |
| TCTTATCTTCCAATTGTTGT+TGG | - | chr7_2:1552477-1552496 | None:intergenic | 30.0% | |
| AACAACAATTGGAAGATAAG+AGG | + | chr7_2:1552476-1552495 | Msa1043330:CDS | 30.0% | |
| ! | TTTGTGAATTTTTGCAGATG+TGG | + | chr7_2:1552784-1552803 | Msa1043330:intron | 30.0% |
| ! | TTGTGAATTTTTGCAGATGT+GGG | + | chr7_2:1552785-1552804 | Msa1043330:intron | 30.0% |
| AGAAGATCTAAAGATAACTG+AGG | + | chr7_2:1552838-1552857 | Msa1043330:CDS | 30.0% | |
| !! | GTTCAGGTAGAAATTTTGAT+TGG | + | chr7_2:1552860-1552879 | Msa1043330:CDS | 30.0% |
| GGAAGAACATCAGATATTAT+TGG | + | chr7_2:1552923-1552942 | Msa1043330:CDS | 30.0% | |
| TATTGGTAGAAAATGGACAA+TGG | + | chr7_2:1552940-1552959 | Msa1043330:CDS | 30.0% | |
| CATTAGTACTTGATATGAAG+GGG | - | chr7_2:1553014-1553033 | None:intergenic | 30.0% | |
| TGATTTATCTTCAATTCCAG+CGG | - | chr7_2:1553581-1553600 | None:intergenic | 30.0% | |
| !! | AACAAAGACCGTCTTTATTT+TGG | + | chr7_2:1553633-1553652 | Msa1043330:CDS | 30.0% |
| AATTGTGCTAGTAATGAGAA+GGG | - | chr7_2:1553695-1553714 | None:intergenic | 30.0% | |
| TTCTCATTACTAGCACAATT+GGG | + | chr7_2:1553695-1553714 | Msa1043330:CDS | 30.0% | |
| ATACCTAATGCAATCACTAA+TGG | - | chr7_2:1553775-1553794 | None:intergenic | 30.0% | |
| ! | TTAGGTATTCTTTTTGTCTG+TGG | + | chr7_2:1553787-1553806 | Msa1043330:CDS | 30.0% |
| !!! | AATGTAGCATTTTTTTCGGT+TGG | + | chr7_2:1553811-1553830 | Msa1043330:CDS | 30.0% |
| TAGTGTGAAAACAAAGACAA+TGG | - | chr7_2:1554025-1554044 | None:intergenic | 30.0% | |
| ATGATGTTTGAGAATGAACA+TGG | + | chr7_2:1554084-1554103 | Msa1043330:CDS | 30.0% | |
| TGATGTTTGAGAATGAACAT+GGG | + | chr7_2:1554085-1554104 | Msa1043330:CDS | 30.0% | |
| CGAGAATTTGATATCTGATA+TGG | + | chr7_2:1554303-1554322 | Msa1043330:three_prime_UTR | 30.0% | |
| ! | TGTATATGAACGGAGATTTT+TGG | + | chr7_2:1554434-1554453 | Msa1043330:three_prime_UTR | 30.0% |
| ! | GTTGTTTCCAAATATCTCAA+AGG | - | chr7_2:1554486-1554505 | None:intergenic | 30.0% |
| ! | CAATGGTTTAGAACTACAGA+AGG | - | chr7_2:1552100-1552119 | None:intergenic | 35.0% |
| CTACCAAAAACATGGAATGT+TGG | - | chr7_2:1552221-1552240 | None:intergenic | 35.0% | |
| ! | GTTCCAAGAAAATGGTAATG+GGG | + | chr7_2:1552360-1552379 | Msa1043330:CDS | 35.0% |
| ! | TTTCCCCATTACCATTTTCT+TGG | - | chr7_2:1552366-1552385 | None:intergenic | 35.0% |
| !! | AGAAAATGGTAATGGGGAAA+TGG | + | chr7_2:1552366-1552385 | Msa1043330:CDS | 35.0% |
| !! | GAAAATGGTAATGGGGAAAT+GGG | + | chr7_2:1552367-1552386 | Msa1043330:CDS | 35.0% |
| GTACTTGTTCTTTGTTCCTA+AGG | - | chr7_2:1552407-1552426 | None:intergenic | 35.0% | |
| GAACAAAGAACAAGTACAAG+AGG | + | chr7_2:1552410-1552429 | Msa1043330:CDS | 35.0% | |
| ! | TGTTTTGCACCAACAACAAT+TGG | + | chr7_2:1552465-1552484 | Msa1043330:CDS | 35.0% |
| AAGATAAGAGGAACAGTACT+AGG | + | chr7_2:1552488-1552507 | Msa1043330:CDS | 35.0% | |
| TCTCTCAACAATGTTCTTCT+TGG | + | chr7_2:1552541-1552560 | Msa1043330:CDS | 35.0% | |
| AACAATGTTCTTCTTGGCTA+TGG | + | chr7_2:1552547-1552566 | Msa1043330:CDS | 35.0% | |
| TCTAAAGATAACTGAGGTTC+AGG | + | chr7_2:1552844-1552863 | Msa1043330:CDS | 35.0% | |
| TGTATCTCTATTGGGTAGTT+TGG | + | chr7_2:1552895-1552914 | Msa1043330:CDS | 35.0% | |
| GTATCTCTATTGGGTAGTTT+GGG | + | chr7_2:1552896-1552915 | Msa1043330:CDS | 35.0% | |
| TAGAAAATGGACAATGGCAT+TGG | + | chr7_2:1552946-1552965 | Msa1043330:CDS | 35.0% | |
| TCATTGTAATTCCACCCATT+TGG | - | chr7_2:1552985-1553004 | None:intergenic | 35.0% | |
| ATGATTGGAAGATTGTTAGC+TGG | + | chr7_2:1553031-1553050 | Msa1043330:CDS | 35.0% | |
| TTGTTAGCTGGAATTGGAAT+AGG | + | chr7_2:1553043-1553062 | Msa1043330:CDS | 35.0% | |
| ATATCACCAAATCTCACTAG+AGG | + | chr7_2:1553103-1553122 | Msa1043330:CDS | 35.0% | |
| ! | ATTTTGCCTTCAGTGTTCAT+TGG | + | chr7_2:1553247-1553266 | Msa1043330:CDS | 35.0% |
| AAACGAAGATGAGAAAGAAG+TGG | + | chr7_2:1553357-1553376 | Msa1043330:CDS | 35.0% | |
| ! | CAGTGTTTTCAACAAATCTC+TGG | + | chr7_2:1553514-1553533 | Msa1043330:CDS | 35.0% |
| !!! | AAAGACCGTCTTTATTTTGG+TGG | + | chr7_2:1553636-1553655 | Msa1043330:CDS | 35.0% |
| AATGGCCACCAAAATAAAGA+CGG | - | chr7_2:1553644-1553663 | None:intergenic | 35.0% | |
| ATTGTGCTAGTAATGAGAAG+GGG | - | chr7_2:1553694-1553713 | None:intergenic | 35.0% | |
| CAATTGTGCTAGTAATGAGA+AGG | - | chr7_2:1553696-1553715 | None:intergenic | 35.0% | |
| CTTCTCATTACTAGCACAAT+TGG | + | chr7_2:1553694-1553713 | Msa1043330:CDS | 35.0% | |
| ACTGCTTGTTTGTTCTGTAT+GGG | + | chr7_2:1553721-1553740 | Msa1043330:CDS | 35.0% | |
| GTATCCAACGCAATTTCTTT+CGG | + | chr7_2:1553961-1553980 | Msa1043330:CDS | 35.0% | |
| ACACTAGTACCTGAAACAAA+AGG | + | chr7_2:1554039-1554058 | Msa1043330:CDS | 35.0% | |
| CACTAGTACCTGAAACAAAA+GGG | + | chr7_2:1554040-1554059 | Msa1043330:CDS | 35.0% | |
| !! | AATGACTTCCCTTTTGTTTC+AGG | - | chr7_2:1554051-1554070 | None:intergenic | 35.0% |
| TGGAATGACAAAATCCATCA+GGG | - | chr7_2:1554208-1554227 | None:intergenic | 35.0% | |
| !!! | AATTTCTCTTGTTTTGTCCG+CGG | + | chr7_2:1554244-1554263 | Msa1043330:three_prime_UTR | 35.0% |
| ACTCACATGGATATGATCTT+CGG | + | chr7_2:1554275-1554294 | Msa1043330:three_prime_UTR | 35.0% | |
| TGGGACATGAGAAAAAACAA+AGG | + | chr7_2:1554323-1554342 | Msa1043330:three_prime_UTR | 35.0% | |
| !! | ATATGAACGGAGATTTTTGG+TGG | + | chr7_2:1554437-1554456 | Msa1043330:three_prime_UTR | 35.0% |
| AAATATCTCAAAGGACCATG+TGG | - | chr7_2:1554477-1554496 | None:intergenic | 35.0% | |
| !! | ACATGGTCCTTTGAGATATT+TGG | + | chr7_2:1554476-1554495 | Msa1043330:three_prime_UTR | 35.0% |
| CATATGAATTACATCCCTCA+TGG | - | chr7_2:1554542-1554561 | None:intergenic | 35.0% | |
| ! | TCTTTTTGTCACGCAAGCAA+TGG | - | chr7_2:1552117-1552136 | None:intergenic | 40.0% |
| ATTGCTTGCGTGACAAAAAG+AGG | + | chr7_2:1552116-1552135 | Msa1043330:five_prime_UTR | 40.0% | |
| TTGCTTGCGTGACAAAAAGA+GGG | + | chr7_2:1552117-1552136 | Msa1043330:five_prime_UTR | 40.0% | |
| ! | CATGACTTGGCAACAATAGA+GGG | - | chr7_2:1552147-1552166 | None:intergenic | 40.0% |
| ! | ACATGACTTGGCAACAATAG+AGG | - | chr7_2:1552148-1552167 | None:intergenic | 40.0% |
| ACAACCTTGTTCAGACACAA+AGG | + | chr7_2:1552284-1552303 | Msa1043330:five_prime_UTR | 40.0% | |
| CAAACCTTTGTGTCTGAACA+AGG | - | chr7_2:1552291-1552310 | None:intergenic | 40.0% | |
| ! | AATGGGGAAATGGGTTTATC+AGG | + | chr7_2:1552376-1552395 | Msa1043330:CDS | 40.0% |
| GGTTTATCAGGAATTCCCTT+AGG | + | chr7_2:1552388-1552407 | Msa1043330:CDS | 40.0% | |
| GCTGCAGTTGTATTCCAAAT+GGG | + | chr7_2:1552968-1552987 | Msa1043330:CDS | 40.0% | |
| GGAAGATTGTTAGCTGGAAT+TGG | + | chr7_2:1553037-1553056 | Msa1043330:CDS | 40.0% | |
| ! | GCTGGAATTGGAATAGGTTT+TGG | + | chr7_2:1553049-1553068 | Msa1043330:CDS | 40.0% |
| ! | GTATCCAATTACGCGTTTTC+CGG | + | chr7_2:1553181-1553200 | Msa1043330:CDS | 40.0% |
| TCCAACTTATGTGTACCGAA+AGG | - | chr7_2:1553207-1553226 | None:intergenic | 40.0% | |
| GCAAAACCAATGAACACTGA+AGG | - | chr7_2:1553256-1553275 | None:intergenic | 40.0% | |
| TTCTGCATTACCAACCATCT+CGG | - | chr7_2:1553301-1553320 | None:intergenic | 40.0% | |
| ATGAGAAAGAAGTGGAAGAG+AGG | + | chr7_2:1553365-1553384 | Msa1043330:CDS | 40.0% | |
| TGCCAATTCTGGTAAATACG+AGG | + | chr7_2:1553417-1553436 | Msa1043330:CDS | 40.0% | |
| GTCCTCGTATTTACCAGAAT+TGG | - | chr7_2:1553422-1553441 | None:intergenic | 40.0% | |
| ! | GACGGTCTTTGTTATACCTA+CGG | - | chr7_2:1553626-1553645 | None:intergenic | 40.0% |
| GACTGCTTGTTTGTTCTGTA+TGG | + | chr7_2:1553720-1553739 | Msa1043330:CDS | 40.0% | |
| !!! | GCATTTTTTTCGGTTGGACT+CGG | + | chr7_2:1553817-1553836 | Msa1043330:CDS | 40.0% |
| ATGTCAAAACCCAGCAAACA+GGG | - | chr7_2:1553843-1553862 | None:intergenic | 40.0% | |
| AAATTGCGTTGGATACAGAC+AGG | - | chr7_2:1553957-1553976 | None:intergenic | 40.0% | |
| CAACTTGTGCAGAACAAAAC+TGG | + | chr7_2:1554144-1554163 | Msa1043330:CDS | 40.0% | |
| AATCCATCAGGGTCGTATAA+AGG | - | chr7_2:1554197-1554216 | None:intergenic | 40.0% | |
| CTGGAATGACAAAATCCATC+AGG | - | chr7_2:1554209-1554228 | None:intergenic | 40.0% | |
| TCATTACAGTGTACTCCATG+AGG | + | chr7_2:1554524-1554543 | Msa1043330:three_prime_UTR | 40.0% | |
| CATTACAGTGTACTCCATGA+GGG | + | chr7_2:1554525-1554544 | Msa1043330:three_prime_UTR | 40.0% | |
| TTGCGTGACAAAAAGAGGGT+TGG | + | chr7_2:1552121-1552140 | Msa1043330:five_prime_UTR | 45.0% | |
| TCTCTATTGGGTAGTTTGGG+TGG | + | chr7_2:1552899-1552918 | Msa1043330:CDS | 45.0% | |
| GGCTGCAGTTGTATTCCAAA+TGG | + | chr7_2:1552967-1552986 | Msa1043330:CDS | 45.0% | |
| GCAGTTGTATTCCAAATGGG+TGG | + | chr7_2:1552971-1552990 | Msa1043330:CDS | 45.0% | |
| AGTGAGCCTCTAGTGAGATT+TGG | - | chr7_2:1553112-1553131 | None:intergenic | 45.0% | |
| ACTTATGTGTACCGAAAGGC+CGG | - | chr7_2:1553203-1553222 | None:intergenic | 45.0% | |
| GCCTTTCGGTACACATAAGT+TGG | + | chr7_2:1553203-1553222 | Msa1043330:CDS | 45.0% | |
| !! | TGGAGAGTAATGCTTGCTGT+TGG | + | chr7_2:1553223-1553242 | Msa1043330:CDS | 45.0% |
| CCGATCTTGCTTCGTCAATT+CGG | - | chr7_2:1553324-1553343 | None:intergenic | 45.0% | |
| CCGAATTGACGAAGCAAGAT+CGG | + | chr7_2:1553321-1553340 | Msa1043330:CDS | 45.0% | |
| GAGGCTAGCAGAAATACAAC+AGG | + | chr7_2:1553384-1553403 | Msa1043330:CDS | 45.0% | |
| CAAGACCAGTAATCAGCATC+CGG | - | chr7_2:1553489-1553508 | None:intergenic | 45.0% | |
| CCAGCGGCCATTAAAATTTC+TGG | - | chr7_2:1553565-1553584 | None:intergenic | 45.0% | |
| !! | CCAGAAATTTTAATGGCCGC+TGG | + | chr7_2:1553562-1553581 | Msa1043330:CDS | 45.0% |
| GGGCCATTAGTGATTGCATT+AGG | + | chr7_2:1553769-1553788 | Msa1043330:CDS | 45.0% | |
| GATGTCAAAACCCAGCAAAC+AGG | - | chr7_2:1553844-1553863 | None:intergenic | 45.0% | |
| ACAGGAAAGACATGGCTACA+AGG | - | chr7_2:1553939-1553958 | None:intergenic | 45.0% | |
| GGATACAGACAGGAAAGACA+TGG | - | chr7_2:1553947-1553966 | None:intergenic | 45.0% | |
| TCCAACGCAATTTCTTTCGG+CGG | + | chr7_2:1553964-1553983 | Msa1043330:CDS | 45.0% | |
| TGAGAATGAACATGGGAGTC+AGG | + | chr7_2:1554092-1554111 | Msa1043330:CDS | 45.0% | |
| GAGAATGAACATGGGAGTCA+GGG | + | chr7_2:1554093-1554112 | Msa1043330:CDS | 45.0% | |
| ATCAGGGTCGTATAAAGGTG+TGG | - | chr7_2:1554192-1554211 | None:intergenic | 45.0% | |
| ACACCTTTATACGACCCTGA+TGG | + | chr7_2:1554191-1554210 | Msa1043330:three_prime_UTR | 45.0% | |
| CATGTGAGTGATTAAAGCCG+CGG | - | chr7_2:1554264-1554283 | None:intergenic | 45.0% | |
| CTATTGGGTAGTTTGGGTGG+TGG | + | chr7_2:1552902-1552921 | Msa1043330:CDS | 50.0% | |
| AAGGCCGGAAAACGCGTAAT+TGG | - | chr7_2:1553188-1553207 | None:intergenic | 50.0% | |
| ! | TTACGCGTTTTCCGGCCTTT+CGG | + | chr7_2:1553189-1553208 | Msa1043330:CDS | 50.0% |
| TTATTCCTGAGTCGCCGAGA+TGG | + | chr7_2:1553284-1553303 | Msa1043330:CDS | 50.0% | |
| GCAGAAATACAACAGGCTGC+TGG | + | chr7_2:1553391-1553410 | Msa1043330:CDS | 50.0% | |
| !!! | GCTGCTGGTTTTGCCAATTC+TGG | + | chr7_2:1553406-1553425 | Msa1043330:CDS | 50.0% |
| AATACGAGGACAAACCCGTG+TGG | + | chr7_2:1553431-1553450 | Msa1043330:CDS | 50.0% | |
| AGAGAGCAATTCACGCCACA+CGG | - | chr7_2:1553449-1553468 | None:intergenic | 50.0% | |
| ! | CGGATGCTGATTACTGGTCT+TGG | + | chr7_2:1553487-1553506 | Msa1043330:CDS | 50.0% |
| ACTCGGAGCTGTAGCGAATA+GGG | + | chr7_2:1553903-1553922 | Msa1043330:CDS | 50.0% | |
| GTAGCGAATAGGGTTTGCAG+CGG | + | chr7_2:1553913-1553932 | Msa1043330:CDS | 50.0% | |
| CCAACGCAATTTCTTTCGGC+GGG | + | chr7_2:1553965-1553984 | Msa1043330:CDS | 50.0% | |
| TGGGAGTCAGGGAAAAGAGA+TGG | + | chr7_2:1554104-1554123 | Msa1043330:CDS | 50.0% | |
| CAGGGAAAAGAGATGGAGCT+AGG | + | chr7_2:1554111-1554130 | Msa1043330:CDS | 50.0% | |
| ! | CGCGGCTTTAATCACTCACA+TGG | + | chr7_2:1554262-1554281 | Msa1043330:three_prime_UTR | 50.0% |
| GAGATGATCCTGTCTCCACA+TGG | + | chr7_2:1554459-1554478 | Msa1043330:three_prime_UTR | 50.0% | |
| TCAAAGGACCATGTGGAGAC+AGG | - | chr7_2:1554470-1554489 | None:intergenic | 50.0% | |
| GCAGATGTGGGTGTGATGAG+TGG | + | chr7_2:1552797-1552816 | Msa1043330:intron | 55.0% | |
| GAGAGCAATTCACGCCACAC+GGG | - | chr7_2:1553448-1553467 | None:intergenic | 55.0% | |
| TGAATTGCTCTCTCCGCCAC+CGG | + | chr7_2:1553456-1553475 | Msa1043330:CDS | 55.0% | |
| ! | CTTCGCCGGATGCTGATTAC+TGG | + | chr7_2:1553481-1553500 | Msa1043330:CDS | 55.0% |
| CTAGCTGCTACTGTTGCCGT+AGG | + | chr7_2:1553607-1553626 | Msa1043330:CDS | 55.0% | |
| CCTGAGCACGCACTCGTAAA+GGG | - | chr7_2:1553876-1553895 | None:intergenic | 55.0% | |
| CACTCGGAGCTGTAGCGAAT+AGG | + | chr7_2:1553902-1553921 | Msa1043330:CDS | 55.0% | |
| CCCGCCGAAAGAAATTGCGT+TGG | - | chr7_2:1553968-1553987 | None:intergenic | 55.0% | |
| TCCTGAGTCGCCGAGATGGT+TGG | + | chr7_2:1553288-1553307 | Msa1043330:CDS | 60.0% | |
| ACCAACCATCTCGGCGACTC+AGG | - | chr7_2:1553292-1553311 | None:intergenic | 60.0% | |
| TTGGACTCGGCCCTGTTTGC+TGG | + | chr7_2:1553830-1553849 | Msa1043330:CDS | 60.0% | |
| TGGACTCGGCCCTGTTTGCT+GGG | + | chr7_2:1553831-1553850 | Msa1043330:CDS | 60.0% | |
| CCCTTTACGAGTGCGTGCTC+AGG | + | chr7_2:1553873-1553892 | Msa1043330:CDS | 60.0% | |
| GCCTGAGCACGCACTCGTAA+AGG | - | chr7_2:1553877-1553896 | None:intergenic | 60.0% | |
| CGTGCTCAGGCATCTGCACT+CGG | + | chr7_2:1553886-1553905 | Msa1043330:CDS | 60.0% | |
| ATCAGCATCCGGCGAAGCGC+CGG | - | chr7_2:1553478-1553497 | None:intergenic | 65.0% | |
| !! | ATCCGGCGAAGCGCCGGTGG+CGG | - | chr7_2:1553472-1553491 | None:intergenic | 75.0% |
| !! | AGCATCCGGCGAAGCGCCGG+TGG | - | chr7_2:1553475-1553494 | None:intergenic | 75.0% |
| ! | CTCCGCCACCGGCGCTTCGC+CGG | + | chr7_2:1553467-1553486 | Msa1043330:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 1552059 | 1554602 | 1552059 | ID=Msa1043330;Name=Msa1043330 |
| chr7_2 | mRNA | 1552059 | 1554602 | 1552059 | ID=Msa1043330-mRNA-1;Parent=Msa1043330;Name=Msa1043330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=296|1|1|1|1|1|2|423|530 |
| chr7_2 | exon | 1552059 | 1552568 | 1552059 | ID=Msa1043330-mRNA-1:exon:238;Parent=Msa1043330-mRNA-1 |
| chr7_2 | exon | 1552801 | 1554602 | 1552801 | ID=Msa1043330-mRNA-1:exon:239;Parent=Msa1043330-mRNA-1 |
| chr7_2 | five_prime_UTR | 1552059 | 1552354 | 1552059 | ID=Msa1043330-mRNA-1:five_prime_utr;Parent=Msa1043330-mRNA-1 |
| chr7_2 | CDS | 1552355 | 1552568 | 1552355 | ID=Msa1043330-mRNA-1:cds;Parent=Msa1043330-mRNA-1 |
| chr7_2 | CDS | 1552801 | 1554179 | 1552801 | ID=Msa1043330-mRNA-1:cds;Parent=Msa1043330-mRNA-1 |
| chr7_2 | three_prime_UTR | 1554180 | 1554602 | 1554180 | ID=Msa1043330-mRNA-1:three_prime_utr;Parent=Msa1043330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
