Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738240 | XP_003616573.1 | 99.107 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738240 | sp|O04200|PXN_ARATH | 72.783 | 327 | 84 | 2 | 1 | 323 | 1 | 326 | 4.92e-162 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738240 | G7KBX5 | 99.107 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0738240 | 0.812825 | 3.488226e-51 | -8.615850e-47 |
| Msa0000880 | Msa0738240 | 0.800546 | 1.369928e-48 | -8.615850e-47 |
| Msa0001960 | Msa0738240 | 0.808237 | 3.418429e-50 | -8.615850e-47 |
| Msa0030700 | Msa0738240 | 0.808573 | 2.898753e-50 | -8.615850e-47 |
| Msa0035120 | Msa0738240 | 0.835664 | 1.471102e-56 | -8.615850e-47 |
| Msa0043500 | Msa0738240 | 0.829893 | 3.988346e-55 | -8.615850e-47 |
| Msa0043650 | Msa0738240 | 0.819278 | 1.263075e-52 | -8.615850e-47 |
| Msa0044090 | Msa0738240 | 0.830264 | 3.239348e-55 | -8.615850e-47 |
| Msa0045340 | Msa0738240 | 0.803903 | 2.790847e-49 | -8.615850e-47 |
| Msa0047640 | Msa0738240 | 0.808734 | 2.677758e-50 | -8.615850e-47 |
| Msa0051740 | Msa0738240 | 0.800154 | 1.646563e-48 | -8.615850e-47 |
| Msa0054820 | Msa0738240 | 0.810965 | 8.866295e-51 | -8.615850e-47 |
| Msa0072720 | Msa0738240 | 0.809221 | 2.105936e-50 | -8.615850e-47 |
| Msa0074600 | Msa0738240 | 0.808951 | 2.406650e-50 | -8.615850e-47 |
| Msa0078120 | Msa0738240 | 0.808287 | 3.334830e-50 | -8.615850e-47 |
| Msa0089980 | Msa0738240 | 0.863294 | 2.759242e-64 | -8.615850e-47 |
| Msa0090010 | Msa0738240 | 0.861046 | 1.351027e-63 | -8.615850e-47 |
| Msa0092410 | Msa0738240 | 0.815362 | 9.609514e-52 | -8.615850e-47 |
| Msa0094780 | Msa0738240 | 0.813840 | 2.088216e-51 | -8.615850e-47 |
| Msa0106620 | Msa0738240 | 0.867454 | 1.352780e-65 | -8.615850e-47 |
| Msa0106710 | Msa0738240 | 0.841107 | 5.806397e-58 | -8.615850e-47 |
| Msa0108410 | Msa0738240 | 0.824696 | 7.019294e-54 | -8.615850e-47 |
| Msa0112270 | Msa0738240 | 0.830722 | 2.502437e-55 | -8.615850e-47 |
| Msa0117520 | Msa0738240 | 0.800407 | 1.461978e-48 | -8.615850e-47 |
| Msa0607320 | Msa0738240 | 0.825842 | 3.759004e-54 | -8.615850e-47 |
| Msa0608270 | Msa0738240 | 0.806842 | 6.760635e-50 | -8.615850e-47 |
| Msa0614380 | Msa0738240 | 0.851612 | 7.922490e-61 | -8.615850e-47 |
| Msa0614510 | Msa0738240 | 0.800327 | 1.518239e-48 | -8.615850e-47 |
| Msa0616450 | Msa0738240 | 0.820800 | 5.662758e-53 | -8.615850e-47 |
| Msa0619050 | Msa0738240 | 0.822655 | 2.109412e-53 | -8.615850e-47 |
| Msa0619420 | Msa0738240 | 0.805482 | 1.307020e-49 | -8.615850e-47 |
| Msa0624900 | Msa0738240 | 0.801945 | 7.086080e-49 | -8.615850e-47 |
| Msa0626270 | Msa0738240 | 0.816804 | 4.577178e-52 | -8.615850e-47 |
| Msa0626460 | Msa0738240 | 0.826219 | 3.058952e-54 | -8.615850e-47 |
| Msa0632370 | Msa0738240 | 0.801786 | 7.639109e-49 | -8.615850e-47 |
| Msa0647030 | Msa0738240 | 0.803335 | 3.660690e-49 | -8.615850e-47 |
| Msa0648830 | Msa0738240 | 0.813124 | 3.000445e-51 | -8.615850e-47 |
| Msa0652690 | Msa0738240 | 0.829976 | 3.807904e-55 | -8.615850e-47 |
| Msa0655920 | Msa0738240 | 0.827439 | 1.563579e-54 | -8.615850e-47 |
| Msa0656000 | Msa0738240 | 0.809855 | 1.539281e-50 | -8.615850e-47 |
| Msa0664540 | Msa0738240 | 0.823312 | 1.482170e-53 | -8.615850e-47 |
| Msa0667770 | Msa0738240 | 0.802379 | 5.770369e-49 | -8.615850e-47 |
| Msa0673120 | Msa0738240 | 0.834184 | 3.470061e-56 | -8.615850e-47 |
| Msa0690310 | Msa0738240 | 0.802750 | 4.838617e-49 | -8.615850e-47 |
| Msa0696850 | Msa0738240 | 0.807475 | 4.964007e-50 | -8.615850e-47 |
| Msa0703800 | Msa0738240 | 0.802371 | 5.792476e-49 | -8.615850e-47 |
| Msa0705390 | Msa0738240 | 0.806298 | 8.803950e-50 | -8.615850e-47 |
| Msa0709270 | Msa0738240 | 0.810546 | 1.092263e-50 | -8.615850e-47 |
| Msa0713680 | Msa0738240 | 0.807699 | 4.450127e-50 | -8.615850e-47 |
| Msa0713870 | Msa0738240 | 0.804459 | 2.138891e-49 | -8.615850e-47 |
| Msa0733010 | Msa0738240 | 0.839882 | 1.214370e-57 | -8.615850e-47 |
| Msa0735550 | Msa0738240 | 0.800596 | 1.338503e-48 | -8.615850e-47 |
| Msa0738240 | Msa0741070 | 0.804856 | 1.767087e-49 | -8.615850e-47 |
| Msa0738240 | Msa0743530 | 0.804898 | 1.732099e-49 | -8.615850e-47 |
| Msa0738240 | Msa0750810 | 0.806088 | 9.749170e-50 | -8.615850e-47 |
| Msa0738240 | Msa0751260 | 0.809309 | 2.016929e-50 | -8.615850e-47 |
| Msa0738240 | Msa0752450 | 0.823176 | 1.594625e-53 | -8.615850e-47 |
| Msa0738240 | Msa0752970 | 0.817645 | 2.962440e-52 | -8.615850e-47 |
| Msa0738240 | Msa0753160 | 0.819434 | 1.164078e-52 | -8.615850e-47 |
| Msa0738240 | Msa0756380 | 0.803863 | 2.845525e-49 | -8.615850e-47 |
| Msa0738240 | Msa0760250 | 0.801459 | 8.917281e-49 | -8.615850e-47 |
| Msa0738240 | Msa0763920 | 0.807528 | 4.837356e-50 | -8.615850e-47 |
| Msa0738240 | Msa0779260 | 0.803301 | 3.720560e-49 | -8.615850e-47 |
| Msa0738240 | Msa0784480 | 0.808588 | 2.876808e-50 | -8.615850e-47 |
| Msa0738240 | Msa0786750 | 0.816520 | 5.301505e-52 | -8.615850e-47 |
| Msa0738240 | Msa0789100 | 0.808213 | 3.459069e-50 | -8.615850e-47 |
| Msa0738240 | Msa0789560 | 0.815430 | 9.284239e-52 | -8.615850e-47 |
| Msa0738240 | Msa0795070 | 0.800350 | 1.502189e-48 | -8.615850e-47 |
| Msa0738240 | Msa0797770 | 0.816199 | 6.255391e-52 | -8.615850e-47 |
| Msa0738240 | Msa0818060 | 0.812300 | 4.543230e-51 | -8.615850e-47 |
| Msa0738240 | Msa0822500 | 0.808945 | 2.413538e-50 | -8.615850e-47 |
| Msa0738240 | Msa0828240 | 0.802937 | 4.426838e-49 | -8.615850e-47 |
| Msa0738240 | Msa0830660 | 0.823874 | 1.094714e-53 | -8.615850e-47 |
| Msa0738240 | Msa0833530 | 0.815886 | 7.345178e-52 | -8.615850e-47 |
| Msa0738240 | Msa0835230 | 0.818109 | 2.327246e-52 | -8.615850e-47 |
| Msa0738240 | Msa0855870 | 0.828473 | 8.814946e-55 | -8.615850e-47 |
| Msa0738240 | Msa0858120 | 0.967045 | 9.707208e-127 | -8.615850e-47 |
| Msa0738240 | Msa0862120 | 0.804216 | 2.403149e-49 | -8.615850e-47 |
| Msa0738240 | Msa0865970 | 0.809806 | 1.577483e-50 | -8.615850e-47 |
| Msa0738240 | Msa0866070 | 0.812981 | 3.225033e-51 | -8.615850e-47 |
| Msa0738240 | Msa0868440 | 0.800231 | 1.588363e-48 | -8.615850e-47 |
| Msa0738240 | Msa0871720 | 0.819550 | 1.095090e-52 | -8.615850e-47 |
| Msa0738240 | Msa0899970 | 0.810776 | 9.740463e-51 | -8.615850e-47 |
| Msa0738240 | Msa0903780 | 0.807040 | 6.137343e-50 | -8.615850e-47 |
| Msa0738240 | Msa0921000 | 0.808656 | 2.781780e-50 | -8.615850e-47 |
| Msa0738240 | Msa0933760 | 0.833957 | 3.955352e-56 | -8.615850e-47 |
| Msa0738240 | Msa0934140 | 0.840789 | 7.036130e-58 | -8.615850e-47 |
| Msa0738240 | Msa0936390 | 0.808601 | 2.858642e-50 | -8.615850e-47 |
| Msa0738240 | Msa0945240 | 0.831423 | 1.683212e-55 | -8.615850e-47 |
| Msa0738240 | Msa0965290 | 0.816380 | 5.697636e-52 | -8.615850e-47 |
| Msa0738240 | Msa0971650 | 0.832071 | 1.165287e-55 | -8.615850e-47 |
| Msa0738240 | Msa0999680 | 0.819457 | 1.149768e-52 | -8.615850e-47 |
| Msa0738240 | Msa1000920 | 0.809500 | 1.835437e-50 | -8.615850e-47 |
| Msa0738240 | Msa1002960 | 0.809370 | 1.956930e-50 | -8.615850e-47 |
| Msa0738240 | Msa1011090 | 0.809097 | 2.238860e-50 | -8.615850e-47 |
| Msa0738240 | Msa1028280 | 0.804857 | 1.766552e-49 | -8.615850e-47 |
| Msa0738240 | Msa1034500 | 0.865051 | 7.813345e-65 | -8.615850e-47 |
| Msa0738240 | Msa1038080 | 0.806221 | 9.141013e-50 | -8.615850e-47 |
| Msa0738240 | Msa1088410 | 0.845392 | 4.178500e-59 | -8.615850e-47 |
| Msa0738240 | Msa1089450 | 0.845360 | 4.262864e-59 | -8.615850e-47 |
| Msa0738240 | Msa1098890 | 0.814940 | 1.192730e-51 | -8.615850e-47 |
| Msa0738240 | Msa1111380 | 0.823477 | 1.356240e-53 | -8.615850e-47 |
| Msa0738240 | Msa1145810 | 0.825207 | 5.316165e-54 | -8.615850e-47 |
| Msa0738240 | Msa1155170 | -0.814441 | 1.538185e-51 | -8.615850e-47 |
| Msa0738240 | Msa1158390 | 0.800160 | 1.641668e-48 | -8.615850e-47 |
| Msa0738240 | Msa1188180 | 0.844341 | 8.029272e-59 | -8.615850e-47 |
| Msa0738240 | Msa1209440 | 0.814068 | 1.859222e-51 | -8.615850e-47 |
| Msa0738240 | Msa1225860 | -0.825019 | 5.887603e-54 | -8.615850e-47 |
| Msa0738240 | Msa1226460 | 0.809440 | 1.890203e-50 | -8.615850e-47 |
| Msa0738240 | Msa1243870 | 0.807408 | 5.128745e-50 | -8.615850e-47 |
| Msa0738240 | Msa1246360 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0738240 | Msa1249880 | 0.804002 | 2.662186e-49 | -8.615850e-47 |
| Msa0738240 | Msa1262010 | 0.839234 | 1.789623e-57 | -8.615850e-47 |
| Msa0738240 | Msa1277080 | 0.807643 | 4.573794e-50 | -8.615850e-47 |
| Msa0738240 | Msa1283740 | 0.850492 | 1.639872e-60 | -8.615850e-47 |
| Msa0738240 | Msa1320670 | 0.801273 | 9.731610e-49 | -8.615850e-47 |
| Msa0738240 | Msa1322630 | 0.848930 | 4.478563e-60 | -8.615850e-47 |
| Msa0738240 | Msa1325410 | -0.816200 | 6.251337e-52 | -8.615850e-47 |
| Msa0738240 | Msa1328640 | 0.811138 | 8.134921e-51 | -8.615850e-47 |
| Msa0738240 | Msa1335160 | 0.801458 | 8.919595e-49 | -8.615850e-47 |
| Msa0738240 | Msa1340200 | 0.850868 | 1.285803e-60 | -8.615850e-47 |
| Msa0738240 | Msa1341840 | 0.811983 | 5.327654e-51 | -8.615850e-47 |
| Msa0738240 | Msa1345810 | 0.821486 | 3.936559e-53 | -8.615850e-47 |
| Msa0738240 | Msa1355450 | 0.825667 | 4.137874e-54 | -8.615850e-47 |
| Msa0738240 | Msa1366550 | 0.811764 | 5.946428e-51 | -8.615850e-47 |
| Msa0738240 | Msa1369690 | 0.803531 | 3.334582e-49 | -8.615850e-47 |
| Msa0738240 | Msa1369920 | -0.805340 | 1.399792e-49 | -8.615850e-47 |
| Msa0738240 | Msa1383530 | 0.820626 | 6.210094e-53 | -8.615850e-47 |
| Msa0738240 | Msa1393820 | 0.846459 | 2.143341e-59 | -8.615850e-47 |
| Msa0738240 | Msa1393840 | -0.819959 | 8.831627e-53 | -8.615850e-47 |
| Msa0738240 | Msa1400930 | 0.809034 | 2.309472e-50 | -8.615850e-47 |
| Msa0738240 | Msa1403710 | 0.829756 | 4.307537e-55 | -8.615850e-47 |
| Msa0738240 | Msa1407750 | 0.820353 | 7.175715e-53 | -8.615850e-47 |
| Msa0738240 | Msa1418240 | 0.802879 | 4.549183e-49 | -8.615850e-47 |
| Msa0738240 | Msa1425880 | 0.800539 | 1.374795e-48 | -8.615850e-47 |
| Msa0738240 | Msa1430550 | 0.814420 | 1.554547e-51 | -8.615850e-47 |
| Msa0738240 | Msa1432130 | 0.828734 | 7.624711e-55 | -8.615850e-47 |
| Msa0738240 | Msa1438520 | 0.815748 | 7.884172e-52 | -8.615850e-47 |
| Msa0738240 | Msa1444120 | 0.803694 | 3.084654e-49 | -8.615850e-47 |
| Msa0738240 | Msa1446780 | 0.816231 | 6.150841e-52 | -8.615850e-47 |
| Msa0738240 | Msa1450720 | 0.802021 | 6.836049e-49 | -8.615850e-47 |
| Msa0738240 | Msa1452710 | 0.806221 | 9.141013e-50 | -8.615850e-47 |
| Msa0738240 | Msa1458600 | 0.802336 | 5.886990e-49 | -8.615850e-47 |
| Msa0738240 | Msa1461540 | 0.802974 | 4.348083e-49 | -8.615850e-47 |
| Msa0738240 | Msa1463030 | 0.826000 | 3.447727e-54 | -8.615850e-47 |
| Msa0738240 | Msa1464090 | 0.839440 | 1.582852e-57 | -8.615850e-47 |
| Msa0738240 | Msa1465210 | 0.802252 | 6.127443e-49 | -8.615850e-47 |
| Msa0120990 | Msa0738240 | 0.800159 | 1.642490e-48 | -8.615850e-47 |
| Msa0124320 | Msa0738240 | 0.829894 | 3.986937e-55 | -8.615850e-47 |
| Msa0125650 | Msa0738240 | 0.824797 | 6.642531e-54 | -8.615850e-47 |
| Msa0138360 | Msa0738240 | 0.807992 | 3.854590e-50 | -8.615850e-47 |
| Msa0141400 | Msa0738240 | 0.800217 | 1.598234e-48 | -8.615850e-47 |
| Msa0143850 | Msa0738240 | 0.810204 | 1.294565e-50 | -8.615850e-47 |
| Msa0160960 | Msa0738240 | 0.805976 | 1.028964e-49 | -8.615850e-47 |
| Msa0168570 | Msa0738240 | 0.802079 | 6.651108e-49 | -8.615850e-47 |
| Msa0168870 | Msa0738240 | 0.814842 | 1.253696e-51 | -8.615850e-47 |
| Msa0171870 | Msa0738240 | 0.801702 | 7.947782e-49 | -8.615850e-47 |
| Msa0173800 | Msa0738240 | 0.811451 | 6.957236e-51 | -8.615850e-47 |
| Msa0183760 | Msa0738240 | 0.866035 | 3.826413e-65 | -8.615850e-47 |
| Msa0187030 | Msa0738240 | 0.800408 | 1.461929e-48 | -8.615850e-47 |
| Msa0187830 | Msa0738240 | 0.816167 | 6.357575e-52 | -8.615850e-47 |
| Msa0189040 | Msa0738240 | 0.833364 | 5.564857e-56 | -8.615850e-47 |
| Msa0189710 | Msa0738240 | 0.800301 | 1.536724e-48 | -8.615850e-47 |
| Msa0204840 | Msa0738240 | 0.802504 | 5.437276e-49 | -8.615850e-47 |
| Msa0205010 | Msa0738240 | 0.802304 | 5.977320e-49 | -8.615850e-47 |
| Msa0220730 | Msa0738240 | 0.845181 | 4.767059e-59 | -8.615850e-47 |
| Msa0225220 | Msa0738240 | 0.836475 | 9.158293e-57 | -8.615850e-47 |
| Msa0225480 | Msa0738240 | 0.809157 | 2.173756e-50 | -8.615850e-47 |
| Msa0225670 | Msa0738240 | 0.808138 | 3.589294e-50 | -8.615850e-47 |
| Msa0227340 | Msa0738240 | 0.806916 | 6.520446e-50 | -8.615850e-47 |
| Msa0231190 | Msa0738240 | 0.804537 | 2.059564e-49 | -8.615850e-47 |
| Msa0232020 | Msa0738240 | 0.823578 | 1.284601e-53 | -8.615850e-47 |
| Msa0232090 | Msa0738240 | 0.812027 | 5.212750e-51 | -8.615850e-47 |
| Msa0234090 | Msa0738240 | 0.815221 | 1.032817e-51 | -8.615850e-47 |
| Msa0237210 | Msa0738240 | 0.869773 | 2.408196e-66 | -8.615850e-47 |
| Msa0369230 | Msa0738240 | 0.813989 | 1.935492e-51 | -8.615850e-47 |
| Msa0372810 | Msa0738240 | 0.822745 | 2.009847e-53 | -8.615850e-47 |
| Msa0378970 | Msa0738240 | 0.846782 | 1.749974e-59 | -8.615850e-47 |
| Msa0379610 | Msa0738240 | 0.807428 | 5.079853e-50 | -8.615850e-47 |
| Msa0382370 | Msa0738240 | 0.837368 | 5.415884e-57 | -8.615850e-47 |
| Msa0389910 | Msa0738240 | 0.820495 | 6.654361e-53 | -8.615850e-47 |
| Msa0395980 | Msa0738240 | 0.815275 | 1.004666e-51 | -8.615850e-47 |
| Msa0428580 | Msa0738240 | 0.836831 | 7.429833e-57 | -8.615850e-47 |
| Msa0430750 | Msa0738240 | 0.822564 | 2.214347e-53 | -8.615850e-47 |
| Msa0432160 | Msa0738240 | 0.853754 | 1.938813e-61 | -8.615850e-47 |
| Msa0432170 | Msa0738240 | 0.803006 | 4.281997e-49 | -8.615850e-47 |
| Msa0440510 | Msa0738240 | 0.811947 | 5.426174e-51 | -8.615850e-47 |
| Msa0443000 | Msa0738240 | 0.805367 | 1.381547e-49 | -8.615850e-47 |
| Msa0443020 | Msa0738240 | 0.801453 | 8.939170e-49 | -8.615850e-47 |
| Msa0450400 | Msa0738240 | -0.840810 | 6.948951e-58 | -8.615850e-47 |
| Msa0455760 | Msa0738240 | 0.800649 | 1.305475e-48 | -8.615850e-47 |
| Msa0468250 | Msa0738240 | 0.842969 | 1.869209e-58 | -8.615850e-47 |
| Msa0474940 | Msa0738240 | 0.836426 | 9.425738e-57 | -8.615850e-47 |
| Msa0476680 | Msa0738240 | 0.855617 | 5.595630e-62 | -8.615850e-47 |
| Msa0480780 | Msa0738240 | 0.829360 | 5.376948e-55 | -8.615850e-47 |
| Msa0481970 | Msa0738240 | 0.846840 | 1.686228e-59 | -8.615850e-47 |
| Msa0240900 | Msa0738240 | 0.836887 | 7.189121e-57 | -8.615850e-47 |
| Msa0244640 | Msa0738240 | 0.814018 | 1.906994e-51 | -8.615850e-47 |
| Msa0244880 | Msa0738240 | 0.806137 | 9.518662e-50 | -8.615850e-47 |
| Msa0264830 | Msa0738240 | 0.809280 | 2.045924e-50 | -8.615850e-47 |
| Msa0269560 | Msa0738240 | 0.816347 | 5.796451e-52 | -8.615850e-47 |
| Msa0274980 | Msa0738240 | 0.855782 | 5.008202e-62 | -8.615850e-47 |
| Msa0278450 | Msa0738240 | 0.802741 | 4.857480e-49 | -8.615850e-47 |
| Msa0279850 | Msa0738240 | 0.812920 | 3.324938e-51 | -8.615850e-47 |
| Msa0283470 | Msa0738240 | 0.821556 | 3.791107e-53 | -8.615850e-47 |
| Msa0283500 | Msa0738240 | 0.801652 | 8.139194e-49 | -8.615850e-47 |
| Msa0288010 | Msa0738240 | -0.828999 | 6.577376e-55 | -8.615850e-47 |
| Msa0302870 | Msa0738240 | 0.804811 | 1.805832e-49 | -8.615850e-47 |
| Msa0310090 | Msa0738240 | 0.804546 | 2.050863e-49 | -8.615850e-47 |
| Msa0315380 | Msa0738240 | 0.811384 | 7.191109e-51 | -8.615850e-47 |
| Msa0315690 | Msa0738240 | 0.871764 | 5.331139e-67 | -8.615850e-47 |
| Msa0317970 | Msa0738240 | 0.845605 | 3.658781e-59 | -8.615850e-47 |
| Msa0321690 | Msa0738240 | 0.804861 | 1.762809e-49 | -8.615850e-47 |
| Msa0322900 | Msa0738240 | 0.817879 | 2.622064e-52 | -8.615850e-47 |
| Msa0340340 | Msa0738240 | 0.809176 | 2.153588e-50 | -8.615850e-47 |
| Msa0342010 | Msa0738240 | 0.838145 | 3.420907e-57 | -8.615850e-47 |
| Msa0344930 | Msa0738240 | 0.806603 | 7.592770e-50 | -8.615850e-47 |
| Msa0347990 | Msa0738240 | 0.800003 | 1.767273e-48 | -8.615850e-47 |
| Msa0358400 | Msa0738240 | 0.831846 | 1.324051e-55 | -8.615850e-47 |
| Msa0362890 | Msa0738240 | 0.819876 | 9.223724e-53 | -8.615850e-47 |
| Msa0483100 | Msa0738240 | 0.801562 | 8.493695e-49 | -8.615850e-47 |
| Msa0483740 | Msa0738240 | 0.805024 | 1.630001e-49 | -8.615850e-47 |
| Msa0491000 | Msa0738240 | 0.826701 | 2.347540e-54 | -8.615850e-47 |
| Msa0506860 | Msa0738240 | 0.809901 | 1.504803e-50 | -8.615850e-47 |
| Msa0508880 | Msa0738240 | 0.804824 | 1.794772e-49 | -8.615850e-47 |
| Msa0521010 | Msa0738240 | 0.857331 | 1.755818e-62 | -8.615850e-47 |
| Msa0521020 | Msa0738240 | 0.826911 | 2.091828e-54 | -8.615850e-47 |
| Msa0522150 | Msa0738240 | 0.803182 | 3.939469e-49 | -8.615850e-47 |
| Msa0527190 | Msa0738240 | 0.813129 | 2.991867e-51 | -8.615850e-47 |
| Msa0532960 | Msa0738240 | 0.805275 | 1.444111e-49 | -8.615850e-47 |
| Msa0534400 | Msa0738240 | 0.816994 | 4.150008e-52 | -8.615850e-47 |
| Msa0534720 | Msa0738240 | 0.802386 | 5.749724e-49 | -8.615850e-47 |
| Msa0544170 | Msa0738240 | 0.834879 | 2.321801e-56 | -8.615850e-47 |
| Msa0544730 | Msa0738240 | 0.820489 | 6.676543e-53 | -8.615850e-47 |
| Msa0553200 | Msa0738240 | 0.800340 | 1.509301e-48 | -8.615850e-47 |
| Msa0562570 | Msa0738240 | 0.808793 | 2.600535e-50 | -8.615850e-47 |
| Msa0567380 | Msa0738240 | 0.832044 | 1.183044e-55 | -8.615850e-47 |
| Msa0572750 | Msa0738240 | 0.851707 | 7.446024e-61 | -8.615850e-47 |
| Msa0576680 | Msa0738240 | 0.801958 | 7.042836e-49 | -8.615850e-47 |
| Msa0579660 | Msa0738240 | 0.819523 | 1.110894e-52 | -8.615850e-47 |
| Msa0583360 | Msa0738240 | -0.821922 | 3.119892e-53 | -8.615850e-47 |
| Msa0594050 | Msa0738240 | 0.825787 | 3.874585e-54 | -8.615850e-47 |
| Msa0597770 | Msa0738240 | 0.802232 | 6.185526e-49 | -8.615850e-47 |
| Msa0600070 | Msa0738240 | 0.807873 | 4.086074e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738240 | MtrunA17_Chr5g0436571 | 99.107 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 0.0 | 676 |
| Msa0738240 | MtrunA17_Chr1g0163521 | 56.193 | 331 | 110 | 5 | 21 | 316 | 23 | 353 | 4.68e-124 | 360 |
| Msa0738240 | MtrunA17_Chr8g0372531 | 28.803 | 309 | 171 | 10 | 23 | 316 | 29 | 303 | 7.38e-34 | 126 |
| Msa0738240 | MtrunA17_Chr7g0269701 | 29.560 | 318 | 182 | 9 | 5 | 314 | 19 | 302 | 2.71e-32 | 122 |
| Msa0738240 | MtrunA17_Chr1g0205941 | 26.048 | 334 | 197 | 5 | 3 | 322 | 6 | 303 | 2.25e-30 | 117 |
| Msa0738240 | MtrunA17_Chr1g0195101 | 27.759 | 299 | 174 | 9 | 24 | 314 | 35 | 299 | 2.28e-26 | 106 |
| Msa0738240 | MtrunA17_Chr5g0423111 | 26.667 | 315 | 195 | 6 | 24 | 333 | 37 | 320 | 8.86e-25 | 102 |
| Msa0738240 | MtrunA17_Chr5g0416661 | 27.381 | 336 | 188 | 6 | 3 | 322 | 6 | 301 | 2.77e-23 | 98.2 |
| Msa0738240 | MtrunA17_Chr3g0135861 | 27.723 | 303 | 197 | 8 | 9 | 308 | 36 | 319 | 7.37e-23 | 97.4 |
| Msa0738240 | MtrunA17_Chr3g0131501 | 26.038 | 265 | 159 | 8 | 54 | 314 | 245 | 476 | 4.60e-18 | 84.7 |
| Msa0738240 | MtrunA17_Chr2g0296061 | 23.143 | 350 | 206 | 8 | 4 | 322 | 11 | 328 | 7.18e-18 | 83.2 |
| Msa0738240 | MtrunA17_Chr8g0385571 | 26.692 | 266 | 158 | 9 | 53 | 314 | 266 | 498 | 1.41e-17 | 83.6 |
| Msa0738240 | MtrunA17_Chr4g0004571 | 26.299 | 308 | 185 | 10 | 9 | 312 | 17 | 286 | 1.81e-17 | 81.6 |
| Msa0738240 | MtrunA17_Chr7g0252401 | 26.616 | 263 | 153 | 8 | 56 | 314 | 249 | 475 | 4.86e-17 | 81.6 |
| Msa0738240 | MtrunA17_Chr8g0366791 | 26.300 | 327 | 205 | 9 | 1 | 322 | 2 | 297 | 6.95e-17 | 79.7 |
| Msa0738240 | MtrunA17_Chr3g0137941 | 21.895 | 306 | 196 | 6 | 9 | 312 | 123 | 387 | 1.74e-16 | 79.7 |
| Msa0738240 | MtrunA17_Chr4g0000261 | 25.079 | 315 | 191 | 15 | 9 | 312 | 67 | 347 | 6.90e-16 | 77.8 |
| Msa0738240 | MtrunA17_Chr1g0196921 | 23.675 | 283 | 181 | 8 | 15 | 293 | 21 | 272 | 7.14e-16 | 77.0 |
| Msa0738240 | MtrunA17_Chr4g0067231 | 22.284 | 359 | 204 | 9 | 1 | 321 | 7 | 328 | 7.66e-16 | 77.4 |
| Msa0738240 | MtrunA17_Chr1g0149111 | 20.588 | 306 | 200 | 6 | 9 | 312 | 140 | 404 | 3.74e-15 | 75.9 |
| Msa0738240 | MtrunA17_Chr6g0488081 | 23.397 | 312 | 214 | 7 | 9 | 319 | 20 | 307 | 2.11e-14 | 72.8 |
| Msa0738240 | MtrunA17_Chr5g0411411 | 25.532 | 329 | 205 | 11 | 1 | 322 | 2 | 297 | 7.78e-14 | 70.9 |
| Msa0738240 | MtrunA17_Chr7g0240341 | 24.910 | 277 | 168 | 8 | 53 | 324 | 75 | 316 | 1.54e-13 | 70.5 |
| Msa0738240 | MtrunA17_Chr8g0383321 | 24.768 | 323 | 176 | 9 | 9 | 328 | 53 | 311 | 2.49e-13 | 69.7 |
| Msa0738240 | MtrunA17_Chr7g0231821 | 26.740 | 273 | 147 | 5 | 3 | 262 | 6 | 238 | 6.19e-13 | 67.8 |
| Msa0738240 | MtrunA17_Chr5g0396801 | 25.000 | 332 | 201 | 11 | 9 | 319 | 39 | 343 | 6.81e-13 | 68.6 |
| Msa0738240 | MtrunA17_Chr1g0201361 | 23.476 | 328 | 186 | 11 | 4 | 328 | 46 | 311 | 4.22e-12 | 66.2 |
| Msa0738240 | MtrunA17_Chr2g0331771 | 22.581 | 310 | 187 | 11 | 9 | 308 | 157 | 423 | 7.80e-12 | 65.9 |
| Msa0738240 | MtrunA17_Chr8g0347451 | 25.075 | 335 | 199 | 12 | 9 | 319 | 52 | 358 | 2.21e-11 | 64.3 |
| Msa0738240 | MtrunA17_Chr4g0028531 | 24.290 | 317 | 197 | 11 | 6 | 315 | 20 | 300 | 3.32e-11 | 63.5 |
| Msa0738240 | MtrunA17_Chr3g0135801 | 21.474 | 312 | 207 | 8 | 9 | 312 | 35 | 316 | 4.24e-11 | 63.2 |
| Msa0738240 | MtrunA17_Chr7g0242311 | 29.139 | 151 | 89 | 4 | 184 | 333 | 139 | 272 | 5.54e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738240 | AT2G39970.1 | 72.783 | 327 | 84 | 2 | 1 | 323 | 1 | 326 | 5.01e-163 | 458 |
| Msa0738240 | AT5G66380.1 | 30.952 | 336 | 181 | 10 | 7 | 329 | 9 | 306 | 4.99e-38 | 138 |
| Msa0738240 | AT2G47490.1 | 27.987 | 318 | 180 | 9 | 24 | 332 | 33 | 310 | 2.84e-32 | 122 |
| Msa0738240 | AT1G25380.1 | 27.215 | 316 | 188 | 8 | 24 | 332 | 37 | 317 | 1.89e-29 | 116 |
| Msa0738240 | AT1G25380.2 | 27.215 | 316 | 188 | 8 | 24 | 332 | 37 | 317 | 1.89e-29 | 116 |
| Msa0738240 | AT3G05290.1 | 26.404 | 356 | 196 | 9 | 3 | 332 | 6 | 321 | 4.17e-27 | 108 |
| Msa0738240 | AT5G27520.1 | 27.746 | 346 | 176 | 12 | 3 | 322 | 8 | 305 | 3.06e-26 | 106 |
| Msa0738240 | AT4G26180.1 | 25.000 | 304 | 202 | 6 | 9 | 310 | 22 | 301 | 2.28e-18 | 85.1 |
| Msa0738240 | AT5G46800.2 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.41e-17 | 81.6 |
| Msa0738240 | AT5G46800.3 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.41e-17 | 81.6 |
| Msa0738240 | AT5G46800.1 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.41e-17 | 81.6 |
| Msa0738240 | AT1G14560.1 | 24.333 | 300 | 202 | 8 | 24 | 319 | 43 | 321 | 2.84e-17 | 81.6 |
| Msa0738240 | AT4G26180.2 | 25.087 | 287 | 189 | 6 | 9 | 293 | 22 | 284 | 7.69e-17 | 80.1 |
| Msa0738240 | AT5G48970.1 | 23.235 | 340 | 201 | 9 | 4 | 312 | 18 | 328 | 6.03e-16 | 78.2 |
| Msa0738240 | AT4G32400.1 | 27.805 | 205 | 113 | 5 | 9 | 212 | 209 | 379 | 8.33e-15 | 75.1 |
| Msa0738240 | AT1G14560.2 | 24.138 | 261 | 176 | 7 | 43 | 299 | 59 | 301 | 8.58e-15 | 74.3 |
| Msa0738240 | AT3G21390.1 | 22.515 | 342 | 206 | 9 | 1 | 312 | 12 | 324 | 9.46e-15 | 74.7 |
| Msa0738240 | AT3G20240.1 | 22.642 | 318 | 195 | 12 | 9 | 312 | 53 | 333 | 1.00e-14 | 74.7 |
| Msa0738240 | AT3G21390.2 | 22.714 | 339 | 203 | 9 | 4 | 312 | 37 | 346 | 1.28e-14 | 74.3 |
| Msa0738240 | AT1G14560.3 | 25.417 | 240 | 155 | 7 | 85 | 319 | 3 | 223 | 5.42e-14 | 70.9 |
| Msa0738240 | AT5G51050.1 | 26.518 | 313 | 178 | 13 | 9 | 314 | 224 | 491 | 6.47e-13 | 69.7 |
| Msa0738240 | AT4G39460.2 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.67e-13 | 68.9 |
| Msa0738240 | AT4G39460.1 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.67e-13 | 68.9 |
| Msa0738240 | AT4G39460.3 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.67e-13 | 68.9 |
| Msa0738240 | AT1G14140.1 | 22.535 | 284 | 182 | 9 | 16 | 293 | 24 | 275 | 1.15e-12 | 68.2 |
| Msa0738240 | AT5G61810.2 | 22.186 | 311 | 189 | 9 | 9 | 314 | 66 | 328 | 4.91e-12 | 66.6 |
| Msa0738240 | AT4G01100.1 | 24.779 | 339 | 185 | 14 | 9 | 314 | 43 | 344 | 6.27e-12 | 66.2 |
| Msa0738240 | AT5G61810.1 | 22.186 | 311 | 189 | 9 | 9 | 314 | 209 | 471 | 7.15e-12 | 66.6 |
| Msa0738240 | AT4G01100.3 | 24.490 | 294 | 176 | 9 | 43 | 314 | 25 | 294 | 1.45e-11 | 64.7 |
| Msa0738240 | AT5G58970.1 | 24.290 | 317 | 190 | 12 | 9 | 314 | 17 | 294 | 2.43e-11 | 64.3 |
| Msa0738240 | AT3G55640.1 | 22.699 | 326 | 199 | 10 | 2 | 314 | 36 | 321 | 2.52e-11 | 64.3 |
| Msa0738240 | AT3G55640.4 | 22.699 | 326 | 199 | 10 | 2 | 314 | 36 | 321 | 2.52e-11 | 64.3 |
| Msa0738240 | AT2G37890.1 | 23.053 | 321 | 212 | 8 | 7 | 321 | 44 | 335 | 3.61e-11 | 63.9 |
| Msa0738240 | AT1G79900.1 | 22.449 | 294 | 177 | 8 | 23 | 312 | 31 | 277 | 5.72e-11 | 63.2 |
| Msa0738240 | AT4G01100.2 | 23.235 | 340 | 203 | 11 | 9 | 314 | 43 | 358 | 6.35e-11 | 63.2 |
Find 87 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAACACTTTGTACAATTT+TGG | 0.182689 | 5_1:+55958098 | None:intergenic |
| AGTCAAAGGTTGTGTGAATT+TGG | 0.233448 | 5_1:-55957990 | Msa0738240:exon |
| ATTATTTCTATCAAATATTC+AGG | 0.250418 | 5_1:-55960695 | Msa0738240:CDS |
| ATCCGCTATGAAGGGTTTAA+TGG | 0.255735 | 5_1:-55958141 | Msa0738240:CDS |
| CTTATTGTTGCTGCTTTATC+CGG | 0.280236 | 5_1:-55960597 | Msa0738240:CDS |
| TTATGACGAGGCTGGAGTTT+TGG | 0.300723 | 5_1:-55959324 | Msa0738240:CDS |
| ACTGTTGAGCCCCTTGCTTA+TGG | 0.318517 | 5_1:-55960245 | Msa0738240:CDS |
| AGATTTGTTACTTGATGAAT+AGG | 0.321077 | 5_1:-55957869 | Msa0738240:three_prime_UTR |
| GACAAGAGACACAATTATAA+AGG | 0.344865 | 5_1:-55958668 | Msa0738240:intron |
| AGCATATTCAATTTAATCAT+AGG | 0.348803 | 5_1:-55957912 | Msa0738240:three_prime_UTR |
| ACCTTTGACTTTAAAGTGTT+GGG | 0.364126 | 5_1:+55958003 | None:intergenic |
| GAGGGATGGGAGAGGTTGTA+TGG | 0.373207 | 5_1:-55963158 | Msa0738240:CDS |
| GCATCTGACAACCTCGGATC+AGG | 0.389004 | 5_1:+55960290 | None:intergenic |
| TGCTGTTGACAAATCCGATA+TGG | 0.396037 | 5_1:-55960479 | Msa0738240:CDS |
| ATGTCGGACGCTTTGATCAA+TGG | 0.399669 | 5_1:-55964070 | Msa0738240:CDS |
| AACCTTTGACTTTAAAGTGT+TGG | 0.408530 | 5_1:+55958002 | None:intergenic |
| TGTAACTAGATATTTCTTCT+CGG | 0.409927 | 5_1:-55958988 | Msa0738240:intron |
| CTCGGAGCTGTCGCTAAGCT+TGG | 0.413175 | 5_1:-55958970 | Msa0738240:CDS |
| AGATTCTTATTGCCCTTCTT+CGG | 0.413495 | 5_1:+55963860 | None:intergenic |
| GAATTTGTCGGTTTAAGAAA+AGG | 0.419547 | 5_1:+55964197 | None:intergenic |
| TACAGCATGAACTGTATAGA+AGG | 0.422667 | 5_1:+55959187 | None:intergenic |
| TAGTAGCGTAACTGCTTTAG+AGG | 0.422674 | 5_1:-55959128 | Msa0738240:intron |
| AAGAAGGGCAATAAGAATCT+TGG | 0.440862 | 5_1:-55963857 | Msa0738240:CDS |
| ATCAATGGATTGGCTGGAGC+TGG | 0.443957 | 5_1:-55964055 | Msa0738240:CDS |
| TAGGAAATAGACTGTGTCAT+TGG | 0.453469 | 5_1:-55957893 | Msa0738240:three_prime_UTR |
| AGAAAGTGATGTTTGTTCAA+TGG | 0.455914 | 5_1:+55960268 | None:intergenic |
| AATTTGTCGGTTTAAGAAAA+GGG | 0.456003 | 5_1:+55964198 | None:intergenic |
| GGATTGGCTGGAGCTGGTGG+AGG | 0.464570 | 5_1:-55964049 | Msa0738240:CDS |
| ATTTAAGACATGCTTCCAAA+TGG | 0.468121 | 5_1:-55957808 | Msa0738240:three_prime_UTR |
| GCTTTGATCAATGGATTGGC+TGG | 0.469248 | 5_1:-55964061 | Msa0738240:CDS |
| ATTAAGATGATCCGCTATGA+AGG | 0.474624 | 5_1:-55958150 | Msa0738240:CDS |
| GGCTTGGCGCCATCACTTGT+CGG | 0.475838 | 5_1:-55963134 | Msa0738240:CDS |
| CGAGTAACAACTAGCCATAT+CGG | 0.481205 | 5_1:+55960465 | None:intergenic |
| TCCCAACACTTTAAAGTCAA+AGG | 0.492946 | 5_1:-55958004 | Msa0738240:CDS |
| GAAAATCATACGGTTTGAAG+AGG | 0.498095 | 5_1:+55964001 | None:intergenic |
| GGACGCTTTGATCAATGGAT+TGG | 0.498413 | 5_1:-55964065 | Msa0738240:CDS |
| TTGAATATGCTAAATGAAGA+TGG | 0.498603 | 5_1:+55957924 | None:intergenic |
| AACTGATCGTGATCCGAAGA+AGG | 0.505218 | 5_1:-55963873 | Msa0738240:CDS |
| GGCAGTGGTGATGGATCAGT+TGG | 0.507558 | 5_1:-55960633 | Msa0738240:CDS |
| CTATCCTCTTCTTGTTGTGA+AGG | 0.508862 | 5_1:-55958932 | Msa0738240:intron |
| ATGAATAGGAGATTAAAATA+CGG | 0.509336 | 5_1:-55957855 | Msa0738240:three_prime_UTR |
| GGAGAGGTTGTATGGAGGCT+TGG | 0.511587 | 5_1:-55963150 | Msa0738240:CDS |
| GAAAATGGGAGTGAATTTGT+CGG | 0.514214 | 5_1:+55964185 | None:intergenic |
| CAAGAAGTTTATGACGAGGC+TGG | 0.515817 | 5_1:-55959332 | Msa0738240:CDS |
| AATGGATTGGCTGGAGCTGG+TGG | 0.518922 | 5_1:-55964052 | Msa0738240:CDS |
| GGTTGTGAAACAAGAGGGAT+GGG | 0.523770 | 5_1:-55963171 | Msa0738240:CDS |
| TGTCGGTACAGCTACATCTC+AGG | 0.524615 | 5_1:-55963117 | Msa0738240:intron |
| TTATTGTTGCTGCTTTATCC+GGG | 0.526799 | 5_1:-55960596 | Msa0738240:intron |
| TTTGAAGTAGTTGTTGTACA+TGG | 0.529730 | 5_1:+55964242 | None:intergenic |
| GGGAACATTCTTTGCAAGCA+AGG | 0.534911 | 5_1:+55958023 | None:intergenic |
| CATGCTGTATGAAACCTTGT+TGG | 0.535971 | 5_1:-55959173 | Msa0738240:CDS |
| AGGTTGTGAAACAAGAGGGA+TGG | 0.541422 | 5_1:-55963172 | Msa0738240:CDS |
| CATGGCTAGTTCCATAAGCA+AGG | 0.545272 | 5_1:+55960234 | None:intergenic |
| GCTAGTTGTTACTCGTATGC+AGG | 0.548103 | 5_1:-55960457 | Msa0738240:intron |
| ATGAGACTAGGCAGTGGTGA+TGG | 0.550388 | 5_1:-55960642 | Msa0738240:CDS |
| CAACGTACCATGACCAATGT+TGG | 0.557142 | 5_1:+55959281 | None:intergenic |
| TTCTTCAAATTCAGGTACAC+AGG | 0.560566 | 5_1:-55958181 | Msa0738240:intron |
| GGATGGGAGAGGTTGTATGG+AGG | 0.563808 | 5_1:-55963155 | Msa0738240:CDS |
| TGAAACAAGAGGGATGGGAG+AGG | 0.572625 | 5_1:-55963166 | Msa0738240:CDS |
| GATTGGCTGGAGCTGGTGGA+GGG | 0.575191 | 5_1:-55964048 | Msa0738240:CDS |
| CTTCACAACAAGAAGAGGAT+AGG | 0.584063 | 5_1:+55958933 | None:intergenic |
| TTAAGATGATCCGCTATGAA+GGG | 0.584087 | 5_1:-55958149 | Msa0738240:CDS |
| GTTCGTGAGTAATGAATCTG+AGG | 0.584535 | 5_1:+55957946 | None:intergenic |
| TATACCTTCACAACAAGAAG+AGG | 0.596824 | 5_1:+55958928 | None:intergenic |
| ATGGCTAGTTCCATAAGCAA+GGG | 0.597655 | 5_1:+55960235 | None:intergenic |
| CATCTGACAACCTCGGATCA+GGG | 0.605620 | 5_1:+55960291 | None:intergenic |
| ACTGATCGTGATCCGAAGAA+GGG | 0.613764 | 5_1:-55963872 | Msa0738240:CDS |
| TGTATTACCAACATTGGTCA+TGG | 0.615271 | 5_1:-55959288 | Msa0738240:intron |
| AAAATCATACGGTTTGAAGA+GGG | 0.617729 | 5_1:+55964002 | None:intergenic |
| GAAGGGTGTATTACCAACAT+TGG | 0.627201 | 5_1:-55959294 | Msa0738240:CDS |
| GCACTAGAGAATATGAGACT+AGG | 0.631351 | 5_1:-55960654 | Msa0738240:CDS |
| GAGAATATGAGACTAGGCAG+TGG | 0.634588 | 5_1:-55960648 | Msa0738240:CDS |
| CAAGCTAGACAAGTTAACAA+TGG | 0.636088 | 5_1:-55958692 | Msa0738240:CDS |
| GGAAAACTCTCCCTGATCCG+AGG | 0.640972 | 5_1:-55960301 | Msa0738240:CDS |
| TCTCATATTCTCTAGTGCAG+CGG | 0.647711 | 5_1:+55960659 | None:intergenic |
| TAAAGCAGCAACAATAAGTG+AGG | 0.655236 | 5_1:+55960602 | None:intergenic |
| GTAGCTGTACCGACAAGTGA+TGG | 0.655326 | 5_1:+55963125 | None:intergenic |
| TGGCTAGTTCCATAAGCAAG+GGG | 0.670675 | 5_1:+55960236 | None:intergenic |
| ATTGTAGGTTGTGAAACAAG+AGG | 0.675879 | 5_1:-55963177 | Msa0738240:intron |
| AAAACATCCTCAAAACATGT+CGG | 0.676069 | 5_1:-55964086 | Msa0738240:exon |
| ATCCATTAAACCCTTCATAG+CGG | 0.697028 | 5_1:+55958139 | None:intergenic |
| TTGTAGGTTGTGAAACAAGA+GGG | 0.697405 | 5_1:-55963176 | Msa0738240:intron |
| TTCGTGAGTAATGAATCTGA+GGG | 0.703508 | 5_1:+55957947 | None:intergenic |
| TGCTTATGGAACTAGCCATG+TGG | 0.711885 | 5_1:-55960231 | Msa0738240:intron |
| GATTCAAGAAGTTTATGACG+AGG | 0.713067 | 5_1:-55959336 | Msa0738240:CDS |
| AGACGCATAGAAAAGAGTCG+AGG | 0.730418 | 5_1:-55960322 | Msa0738240:CDS |
| TCAATGGCATCTGACAACCT+CGG | 0.745050 | 5_1:+55960284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAATCAATTTG+AGG | + | chr5_1:55957833-55957852 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAATCAATTCT+AGG | + | chr5_1:55958474-55958493 | None:intergenic | 10.0% |
| !!! | TTCTTTTATTTTTGTTATAT+TGG | - | chr5_1:55958719-55958738 | Msa0738240:intron | 10.0% |
| !!! | TCTTTTATTTTTGTTATATT+GGG | - | chr5_1:55958720-55958739 | Msa0738240:intron | 10.0% |
| !! | TATATATAAAGAAATTGAAT+AGG | + | chr5_1:55961190-55961209 | None:intergenic | 10.0% |
| !! | ATTTATTTATCAATTAGAAT+AGG | - | chr5_1:55962213-55962232 | Msa0738240:intron | 10.0% |
| !! | ATTGAAATCAATCAATATAT+AGG | - | chr5_1:55959083-55959102 | Msa0738240:intron | 15.0% |
| !! | TTAAAGTTCAATAAATTCAT+TGG | - | chr5_1:55959813-55959832 | Msa0738240:intron | 15.0% |
| !! | TAAAGTTCAATAAATTCATT+GGG | - | chr5_1:55959814-55959833 | Msa0738240:intron | 15.0% |
| !! | AAATTGCAGAAATTAAAAAA+GGG | + | chr5_1:55961219-55961238 | None:intergenic | 15.0% |
| !! | AAAATTGCAGAAATTAAAAA+AGG | + | chr5_1:55961220-55961239 | None:intergenic | 15.0% |
| !!! | ATTATTTCTATCAAATATTC+AGG | - | chr5_1:55961259-55961278 | Msa0738240:intron | 15.0% |
| !! | TTTATATCATATTCTAATAG+AGG | + | chr5_1:55961546-55961565 | None:intergenic | 15.0% |
| !!! | TTTTTAAAGCAAAGATTATA+CGG | + | chr5_1:55962302-55962321 | None:intergenic | 15.0% |
| !! | ATTTATATATCAATCAGTTT+AGG | - | chr5_1:55962420-55962439 | Msa0738240:intron | 15.0% |
| !! | TCATTATTCTTAAAAACATA+AGG | - | chr5_1:55963145-55963164 | Msa0738240:CDS | 15.0% |
| !!! | TCAAAATCAAATTTTCATCA+CGG | + | chr5_1:55958195-55958214 | None:intergenic | 20.0% |
| !! | AGTTGAACAATAAATTTAAG+TGG | + | chr5_1:55958498-55958517 | None:intergenic | 20.0% |
| !! | ACTAACATTGTTCAATTTAA+GGG | + | chr5_1:55958987-55959006 | None:intergenic | 20.0% |
| !!! | TTAAATAGATATTTTGACAG+AGG | - | chr5_1:55959133-55959152 | Msa0738240:CDS | 20.0% |
| !!! | TAAATAGATATTTTGACAGA+GGG | - | chr5_1:55959134-55959153 | Msa0738240:CDS | 20.0% |
| !!! | AACTCATTTTAAAAATGTAG+GGG | + | chr5_1:55959241-55959260 | None:intergenic | 20.0% |
| !!! | CAACTCATTTTAAAAATGTA+GGG | + | chr5_1:55959242-55959261 | None:intergenic | 20.0% |
| !!! | TCAACTCATTTTAAAAATGT+AGG | + | chr5_1:55959243-55959262 | None:intergenic | 20.0% |
| !! | AATAACCTTCTACAATAATA+CGG | + | chr5_1:55959719-55959738 | None:intergenic | 20.0% |
| !! | AAAGTTCAATAAATTCATTG+GGG | - | chr5_1:55959815-55959834 | Msa0738240:intron | 20.0% |
| !!! | ATTGGAAAATCTTAATTTGA+AGG | - | chr5_1:55959838-55959857 | Msa0738240:intron | 20.0% |
| !!! | ACTAATATTTTTTGTTTTGG+TGG | + | chr5_1:55960518-55960537 | None:intergenic | 20.0% |
| !!! | CACACTAATATTTTTTGTTT+TGG | + | chr5_1:55960521-55960540 | None:intergenic | 20.0% |
| !! | ATCAATCTTGCTAAAAAAAT+GGG | - | chr5_1:55960808-55960827 | Msa0738240:intron | 20.0% |
| !! | TAATCTATGATAACTCAATA+GGG | + | chr5_1:55961043-55961062 | None:intergenic | 20.0% |
| !! | ATAATCTATGATAACTCAAT+AGG | + | chr5_1:55961044-55961063 | None:intergenic | 20.0% |
| !!! | ATTGAATTTGTTAATGATGT+TGG | - | chr5_1:55961071-55961090 | Msa0738240:intron | 20.0% |
| !! | AATTGCAGAAATTAAAAAAG+GGG | + | chr5_1:55961218-55961237 | None:intergenic | 20.0% |
| !!! | CTTTTATAATAAGATTACAG+AGG | + | chr5_1:55961775-55961794 | None:intergenic | 20.0% |
| !! | TAAAAGAACTATTACTAGTA+TGG | - | chr5_1:55961789-55961808 | Msa0738240:intron | 20.0% |
| !!! | CTTATCATATACTGAATTTT+CGG | - | chr5_1:55962500-55962519 | Msa0738240:intron | 20.0% |
| !!! | TGTGATTTTAGTTTTACATA+CGG | + | chr5_1:55962870-55962889 | None:intergenic | 20.0% |
| !! | TTCTTATTATACCATGAATA+TGG | - | chr5_1:55963328-55963347 | Msa0738240:intron | 20.0% |
| !! | TTATTAAGGAGAAAAAAACA+TGG | + | chr5_1:55963479-55963498 | None:intergenic | 20.0% |
| !! | TTTCTCCTTAATAATTTGAA+CGG | - | chr5_1:55963485-55963504 | Msa0738240:intron | 20.0% |
| !! | AGCATATTCAATTTAATCAT+AGG | - | chr5_1:55964042-55964061 | Msa0738240:CDS | 20.0% |
| !! | ATGAATAGGAGATTAAAATA+CGG | - | chr5_1:55964099-55964118 | Msa0738240:five_prime_UTR | 20.0% |
| !!! | AATTTGTCGGTTTAAGAAAA+GGG | + | chr5_1:55957759-55957778 | None:intergenic | 25.0% |
| ! | ATAGTATCAAGAGAGAAAAT+GGG | + | chr5_1:55957786-55957805 | None:intergenic | 25.0% |
| !!! | ACTTTGAAACGAAAATCATA+CGG | + | chr5_1:55957966-55957985 | None:intergenic | 25.0% |
| !! | AGTTTCAATCTTTTCTCAAT+TGG | - | chr5_1:55957983-55958002 | Msa0738240:exon | 25.0% |
| !! | GTTTCAATCTTTTCTCAATT+GGG | - | chr5_1:55957984-55958003 | Msa0738240:exon | 25.0% |
| !!! | TTGATTTTGAGTCAATTGTT+TGG | - | chr5_1:55958205-55958224 | Msa0738240:intron | 25.0% |
| ! | TTAAGTAGAATCAATTCTAG+AGG | - | chr5_1:55958332-55958351 | Msa0738240:intron | 25.0% |
| !!! | TGTATTTTTTGTTCCACTTT+TGG | - | chr5_1:55958362-55958381 | Msa0738240:intron | 25.0% |
| ! | AAGGTAAAATGATCTATGTT+TGG | + | chr5_1:55958540-55958559 | None:intergenic | 25.0% |
| !! | TGCACATATAGAATCAATTT+TGG | - | chr5_1:55958611-55958630 | Msa0738240:intron | 25.0% |
| ! | ACAAAACATACACAGAAAAA+CGG | - | chr5_1:55958651-55958670 | Msa0738240:intron | 25.0% |
| !!! | GAAACTTGATAATGGTTTTT+TGG | - | chr5_1:55958673-55958692 | Msa0738240:CDS | 25.0% |
| ! | GACTAACATTGTTCAATTTA+AGG | + | chr5_1:55958988-55959007 | None:intergenic | 25.0% |
| !! | AATTTAGCACCACATTTTAA+AGG | - | chr5_1:55959026-55959045 | Msa0738240:intron | 25.0% |
| !!! | AGCATAAAACCTTTAAAATG+TGG | + | chr5_1:55959038-55959057 | None:intergenic | 25.0% |
| ! | ACTAGTAGTTCTTCAAATTA+AGG | + | chr5_1:55959178-55959197 | None:intergenic | 25.0% |
| !!! | TTTGCTATTTCGTAAATTTG+AGG | - | chr5_1:55959200-55959219 | Msa0738240:intron | 25.0% |
| !!! | TTGCTATTTCGTAAATTTGA+GGG | - | chr5_1:55959201-55959220 | Msa0738240:intron | 25.0% |
| ! | ATATGACATGAAAATCAACA+CGG | + | chr5_1:55959299-55959318 | None:intergenic | 25.0% |
| ! | TAAGATTACGAAGTTAAGAA+GGG | + | chr5_1:55959325-55959344 | None:intergenic | 25.0% |
| !! | AGCAAGATTAATAATGGAAA+GGG | - | chr5_1:55959487-55959506 | Msa0738240:intron | 25.0% |
| ! | ATAACCTTCTACAATAATAC+GGG | + | chr5_1:55959718-55959737 | None:intergenic | 25.0% |
| ! | TTATTGTAGAAGGTTATTTG+AGG | - | chr5_1:55959721-55959740 | Msa0738240:intron | 25.0% |
| ! | TATTGTAGAAGGTTATTTGA+GGG | - | chr5_1:55959722-55959741 | Msa0738240:intron | 25.0% |
| !! | TTCAGATAGCTATTATGTTT+TGG | - | chr5_1:55960033-55960052 | Msa0738240:intron | 25.0% |
| !! | TCAGATAGCTATTATGTTTT+GGG | - | chr5_1:55960034-55960053 | Msa0738240:intron | 25.0% |
| !!! | TATTATGTTTTGGGTACAAT+TGG | - | chr5_1:55960043-55960062 | Msa0738240:intron | 25.0% |
| ! | AACTATAATGACAAAGACAA+GGG | + | chr5_1:55960217-55960236 | None:intergenic | 25.0% |
| ! | AAACTTGATATTGACAATCT+TGG | + | chr5_1:55960393-55960412 | None:intergenic | 25.0% |
| !! | ATCAAGTTTTTCATCAAGAT+CGG | - | chr5_1:55960404-55960423 | Msa0738240:intron | 25.0% |
| ! | CATCAATCTTGCTAAAAAAA+TGG | - | chr5_1:55960807-55960826 | Msa0738240:intron | 25.0% |
| ! | ATTGTATAAGTAATTGATCC+TGG | - | chr5_1:55961145-55961164 | Msa0738240:intron | 25.0% |
| !! | TTTCTGCAATTTTATGATAC+AGG | - | chr5_1:55961227-55961246 | Msa0738240:intron | 25.0% |
| !! | TTCTGCAATTTTATGATACA+GGG | - | chr5_1:55961228-55961247 | Msa0738240:intron | 25.0% |
| !! | CTTTCAATGTAAATTTTACC+CGG | + | chr5_1:55961379-55961398 | None:intergenic | 25.0% |
| ! | AGCTGAATGAAAAATTTATC+AGG | + | chr5_1:55961446-55961465 | None:intergenic | 25.0% |
| !! | TTTTGTTAAGTTATGCTAGT+TGG | - | chr5_1:55961827-55961846 | Msa0738240:intron | 25.0% |
| !! | TTAAGTTGTTTATCCTAACA+GGG | + | chr5_1:55961858-55961877 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCTAAC+AGG | + | chr5_1:55961859-55961878 | None:intergenic | 25.0% |
| ! | AAACACTTGTGATACTATTT+GGG | + | chr5_1:55962071-55962090 | None:intergenic | 25.0% |
| ! | TAAACACTTGTGATACTATT+TGG | + | chr5_1:55962072-55962091 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATCCAAAC+AGG | - | chr5_1:55962107-55962126 | Msa0738240:intron | 25.0% |
| ! | GAAAAGAAAGAATAGATGAT+TGG | - | chr5_1:55962324-55962343 | Msa0738240:intron | 25.0% |
| !!! | AGTTAACTTTTTTCATGCTA+AGG | - | chr5_1:55962698-55962717 | Msa0738240:intron | 25.0% |
| !!! | GTTAACTTTTTTCATGCTAA+GGG | - | chr5_1:55962699-55962718 | Msa0738240:intron | 25.0% |
| ! | TGTAACTAGATATTTCTTCT+CGG | - | chr5_1:55962966-55962985 | Msa0738240:intron | 25.0% |
| ! | AACAAACACAATGCAAAAAA+TGG | + | chr5_1:55963065-55963084 | None:intergenic | 25.0% |
| !!! | AACGTATTGATTATTGACTA+TGG | + | chr5_1:55963096-55963115 | None:intergenic | 25.0% |
| ! | TCTTAAAAACATAAGGAAGA+AGG | - | chr5_1:55963152-55963171 | Msa0738240:CDS | 25.0% |
| !! | ACAGATTCAGAACAATATTT+TGG | + | chr5_1:55963208-55963227 | None:intergenic | 25.0% |
| ! | AAGATTATGAACCATATTCA+TGG | + | chr5_1:55963342-55963361 | None:intergenic | 25.0% |
| ! | TAACACCGTTCAAATTATTA+AGG | + | chr5_1:55963493-55963512 | None:intergenic | 25.0% |
| ! | TTAATAATTTGAACGGTGTT+AGG | - | chr5_1:55963492-55963511 | Msa0738240:intron | 25.0% |
| ! | ATCAAGACTATAGTGATATA+GGG | - | chr5_1:55963696-55963715 | Msa0738240:intron | 25.0% |
| !! | AAGAACACTTTGTACAATTT+TGG | + | chr5_1:55963859-55963878 | None:intergenic | 25.0% |
| ! | TTGAATATGCTAAATGAAGA+TGG | + | chr5_1:55964033-55964052 | None:intergenic | 25.0% |
| !!! | AGATTTGTTACTTGATGAAT+AGG | - | chr5_1:55964085-55964104 | Msa0738240:exon | 25.0% |
| !! | TAAACACGAATTTTTCCATT+TGG | + | chr5_1:55964164-55964183 | None:intergenic | 25.0% |
| ! | TTTGAAGTAGTTGTTGTACA+TGG | + | chr5_1:55957715-55957734 | None:intergenic | 30.0% |
| ! | AGGGTAGTTTTCAATTACTT+GGG | + | chr5_1:55957740-55957759 | None:intergenic | 30.0% |
| ! | AAGGGTAGTTTTCAATTACT+TGG | + | chr5_1:55957741-55957760 | None:intergenic | 30.0% |
| !! | GAATTTGTCGGTTTAAGAAA+AGG | + | chr5_1:55957760-55957779 | None:intergenic | 30.0% |
| CATAGTATCAAGAGAGAAAA+TGG | + | chr5_1:55957787-55957806 | None:intergenic | 30.0% | |
| !!! | GAGGATGTTTTATTTTTCTC+AGG | + | chr5_1:55957814-55957833 | None:intergenic | 30.0% |
| AAAACATCCTCAAAACATGT+CGG | - | chr5_1:55957868-55957887 | Msa0738240:three_prime_UTR | 30.0% | |
| AAAATCATACGGTTTGAAGA+GGG | + | chr5_1:55957955-55957974 | None:intergenic | 30.0% | |
| ! | GTTTTTGTGTTGTGATCTAT+AGG | - | chr5_1:55958042-55958061 | Msa0738240:CDS | 30.0% |
| ! | AACTTTTCAACAAATGTGTC+AGG | - | chr5_1:55958120-55958139 | Msa0738240:CDS | 30.0% |
| ACAAAGATCATGTGATTGTT+TGG | - | chr5_1:55958158-55958177 | Msa0738240:CDS | 30.0% | |
| GTGATTGTTTGGTTAATGTT+TGG | - | chr5_1:55958169-55958188 | Msa0738240:CDS | 30.0% | |
| !!! | ATTTTTTGTTCCACTTTTGG+AGG | - | chr5_1:55958365-55958384 | Msa0738240:intron | 30.0% |
| ! | TACACCTCAAGAATCAATTT+TGG | + | chr5_1:55958393-55958412 | None:intergenic | 30.0% |
| TCAAGTAGAATCAATTCTAG+TGG | + | chr5_1:55958428-55958447 | None:intergenic | 30.0% | |
| TACTTGAAGCTAGAAATCAT+CGG | - | chr5_1:55958441-55958460 | Msa0738240:intron | 30.0% | |
| GAAAAACGGAAACTTGATAA+TGG | - | chr5_1:55958665-55958684 | Msa0738240:intron | 30.0% | |
| ! | TTTTTGGACTGAATGAAAGT+TGG | - | chr5_1:55958689-55958708 | Msa0738240:CDS | 30.0% |
| ! | GATTAGTTGTTTAGTGATTG+TGG | - | chr5_1:55958742-55958761 | Msa0738240:intron | 30.0% |
| AAAAACACTGAGCTAAAATG+AGG | + | chr5_1:55958866-55958885 | None:intergenic | 30.0% | |
| !!! | TCATTTTAGCTCAGTGTTTT+TGG | - | chr5_1:55958865-55958884 | Msa0738240:intron | 30.0% |
| ATGTAGTCCTTGAAATTGTA+AGG | - | chr5_1:55958917-55958936 | Msa0738240:intron | 30.0% | |
| AGGTCGTTTATTGATATAGA+TGG | - | chr5_1:55959103-55959122 | Msa0738240:intron | 30.0% | |
| AAGATTACGAAGTTAAGAAG+GGG | + | chr5_1:55959324-55959343 | None:intergenic | 30.0% | |
| GTAAGATTACGAAGTTAAGA+AGG | + | chr5_1:55959326-55959345 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTTGTTGAAGAAG+TGG | - | chr5_1:55959385-55959404 | Msa0738240:intron | 30.0% |
| !!! | AGTTTTGTTGTTGAAGAAGT+GGG | - | chr5_1:55959386-55959405 | Msa0738240:intron | 30.0% |
| GCTAAGAGCAAGATTAATAA+TGG | - | chr5_1:55959481-55959500 | Msa0738240:intron | 30.0% | |
| ! | GAGCAAGATTAATAATGGAA+AGG | - | chr5_1:55959486-55959505 | Msa0738240:intron | 30.0% |
| ! | ATGTAATTTGAAGTTCTCTG+CGG | - | chr5_1:55959559-55959578 | Msa0738240:intron | 30.0% |
| AATAATACGGGTAGTAAACT+TGG | + | chr5_1:55959706-55959725 | None:intergenic | 30.0% | |
| ATTGTAGAAGGTTATTTGAG+GGG | - | chr5_1:55959723-55959742 | Msa0738240:intron | 30.0% | |
| TCAATAAATTCATTGGGGAT+TGG | - | chr5_1:55959820-55959839 | Msa0738240:intron | 30.0% | |
| ! | ACAAGACTTTTTACTTTCAC+TGG | - | chr5_1:55959904-55959923 | Msa0738240:intron | 30.0% |
| ! | TGCTTTTCTCACCATAATAA+AGG | + | chr5_1:55959942-55959961 | None:intergenic | 30.0% |
| TTTATTATGGTGAGAAAAGC+AGG | - | chr5_1:55959941-55959960 | Msa0738240:intron | 30.0% | |
| TTATTATGGTGAGAAAAGCA+GGG | - | chr5_1:55959942-55959961 | Msa0738240:intron | 30.0% | |
| !! | TTGGTTCTAGCATCATTATT+CGG | - | chr5_1:55959974-55959993 | Msa0738240:intron | 30.0% |
| AAAGAGGAGTAAAACCAAAA+AGG | - | chr5_1:55959999-55960018 | Msa0738240:intron | 30.0% | |
| !! | GAACAACTTTTTCTCCTTTT+TGG | + | chr5_1:55960016-55960035 | None:intergenic | 30.0% |
| GGGCTACTAAAATGAAAATT+TGG | + | chr5_1:55960197-55960216 | None:intergenic | 30.0% | |
| CAACTATAATGACAAAGACA+AGG | + | chr5_1:55960218-55960237 | None:intergenic | 30.0% | |
| GCTCAAATTGTTAAAATGAC+TGG | - | chr5_1:55960251-55960270 | Msa0738240:CDS | 30.0% | |
| ! | TTTGATGGACATCATATTTG+AGG | + | chr5_1:55960291-55960310 | None:intergenic | 30.0% |
| GTAACAGAGAAAAAGACATT+TGG | + | chr5_1:55960326-55960345 | None:intergenic | 30.0% | |
| TATTGACAATCTTGGTTAAG+AGG | + | chr5_1:55960385-55960404 | None:intergenic | 30.0% | |
| ! | TCAAGTTTTTCATCAAGATC+GGG | - | chr5_1:55960405-55960424 | Msa0738240:intron | 30.0% |
| ! | TATAGATTTTCGGCATAAGT+AGG | + | chr5_1:55960963-55960982 | None:intergenic | 30.0% |
| !!! | TCAAAGGCACTATAGATTTT+CGG | + | chr5_1:55960973-55960992 | None:intergenic | 30.0% |
| AATTACTTGAATTACTCGCA+TGG | - | chr5_1:55961407-55961426 | Msa0738240:intron | 30.0% | |
| TACTAGTATGGTATATTCAG+TGG | - | chr5_1:55961801-55961820 | Msa0738240:intron | 30.0% | |
| TAAATCAAGACTAAAAGCTC+AGG | + | chr5_1:55962161-55962180 | None:intergenic | 30.0% | |
| TATCAATCAGTTTAGGTGAT+TGG | - | chr5_1:55962427-55962446 | Msa0738240:intron | 30.0% | |
| !! | GTTGTTTTGTTACAAATCTC+AGG | - | chr5_1:55962736-55962755 | Msa0738240:intron | 30.0% |
| GACAAGAGACACAATTATAA+AGG | - | chr5_1:55963286-55963305 | Msa0738240:intron | 30.0% | |
| CATAGCAACATAAGCATATT+GGG | + | chr5_1:55963424-55963443 | None:intergenic | 30.0% | |
| ACATAGCAACATAAGCATAT+TGG | + | chr5_1:55963425-55963444 | None:intergenic | 30.0% | |
| ATGCCTTTAATCTTAAGTGT+TGG | - | chr5_1:55963610-55963629 | Msa0738240:intron | 30.0% | |
| GATCAAGACTATAGTGATAT+AGG | - | chr5_1:55963695-55963714 | Msa0738240:intron | 30.0% | |
| GAGTGTAGTCAAAGAATATA+AGG | + | chr5_1:55963741-55963760 | None:intergenic | 30.0% | |
| ACAGTATGTTCTTCAAATTC+AGG | - | chr5_1:55963765-55963784 | Msa0738240:intron | 30.0% | |
| !!! | GGGTTTAATGGATTTTACAA+AGG | - | chr5_1:55963825-55963844 | Msa0738240:intron | 30.0% |
| !!! | TAATGGATTTTACAAAGGCA+TGG | - | chr5_1:55963830-55963849 | Msa0738240:intron | 30.0% |
| !! | AATGGATTTTACAAAGGCAT+GGG | - | chr5_1:55963831-55963850 | Msa0738240:intron | 30.0% |
| !! | ACCTTTGACTTTAAAGTGTT+GGG | + | chr5_1:55963954-55963973 | None:intergenic | 30.0% |
| !! | AACCTTTGACTTTAAAGTGT+TGG | + | chr5_1:55963955-55963974 | None:intergenic | 30.0% |
| ! | ATTTAAGACATGCTTCCAAA+TGG | - | chr5_1:55964146-55964165 | Msa0738240:five_prime_UTR | 30.0% |
| GAAAATGGGAGTGAATTTGT+CGG | + | chr5_1:55957772-55957791 | None:intergenic | 35.0% | |
| GAAAATCATACGGTTTGAAG+AGG | + | chr5_1:55957956-55957975 | None:intergenic | 35.0% | |
| AGATTCTTATTGCCCTTCTT+CGG | + | chr5_1:55958097-55958116 | None:intergenic | 35.0% | |
| AAGAAGGGCAATAAGAATCT+TGG | - | chr5_1:55958097-55958116 | Msa0738240:CDS | 35.0% | |
| !! | CCAGTCTAAAATTGAGTTGA+AGG | + | chr5_1:55958559-55958578 | None:intergenic | 35.0% |
| ! | CCTTCAACTCAATTTTAGAC+TGG | - | chr5_1:55958556-55958575 | Msa0738240:intron | 35.0% |
| ! | GTATGTTTTGTCTCCACTTT+TGG | + | chr5_1:55958642-55958661 | None:intergenic | 35.0% |
| TGGTTATGTCAATGCATTGT+AGG | - | chr5_1:55958762-55958781 | Msa0738240:intron | 35.0% | |
| ATTGTAGGTTGTGAAACAAG+AGG | - | chr5_1:55958777-55958796 | Msa0738240:intron | 35.0% | |
| TTGTAGGTTGTGAAACAAGA+GGG | - | chr5_1:55958778-55958797 | Msa0738240:intron | 35.0% | |
| GTCCTTGAAATTGTAAGGAT+CGG | - | chr5_1:55958922-55958941 | Msa0738240:intron | 35.0% | |
| TAGTTCATTGCTCATGATGT+TGG | + | chr5_1:55959585-55959604 | None:intergenic | 35.0% | |
| GAAACTTCATGACATCGAAT+GGG | + | chr5_1:55959645-55959664 | None:intergenic | 35.0% | |
| TGAAACTTCATGACATCGAA+TGG | + | chr5_1:55959646-55959665 | None:intergenic | 35.0% | |
| ACTACCCGTATTATTGTAGA+AGG | - | chr5_1:55959711-55959730 | Msa0738240:intron | 35.0% | |
| !! | TTAGTTAGGTATGATGGACA+GGG | - | chr5_1:55959746-55959765 | Msa0738240:intron | 35.0% |
| !! | TAATTTGAAGGAAGTGTTGC+TGG | - | chr5_1:55959850-55959869 | Msa0738240:intron | 35.0% |
| AAGTGTTAGGGCCTTTATTA+TGG | - | chr5_1:55959928-55959947 | Msa0738240:intron | 35.0% | |
| GCATCATTATTCGGTAAAAG+AGG | - | chr5_1:55959983-55960002 | Msa0738240:intron | 35.0% | |
| AAGACTTGACTAAAGGTAGT+AGG | + | chr5_1:55960089-55960108 | None:intergenic | 35.0% | |
| ! | GGACTGTTTTCTGATTGATT+GGG | + | chr5_1:55960364-55960383 | None:intergenic | 35.0% |
| ! | AGGACTGTTTTCTGATTGAT+TGG | + | chr5_1:55960365-55960384 | None:intergenic | 35.0% |
| TCTTACCTATGTGATTACGT+TGG | - | chr5_1:55960462-55960481 | Msa0738240:CDS | 35.0% | |
| ! | GCTTTGAGTAGTTTCTTTCA+TGG | + | chr5_1:55960597-55960616 | None:intergenic | 35.0% |
| CAAACAGAGCAATCAAAAAC+CGG | - | chr5_1:55960711-55960730 | Msa0738240:intron | 35.0% | |
| AAACAGAGCAATCAAAAACC+GGG | - | chr5_1:55960712-55960731 | Msa0738240:intron | 35.0% | |
| ! | TCACAAGCCAGAAACAATTT+TGG | - | chr5_1:55960774-55960793 | Msa0738240:intron | 35.0% |
| GATCGTACCAAAATTGTTTC+TGG | + | chr5_1:55960784-55960803 | None:intergenic | 35.0% | |
| TCAAACCCTCCAATATGAAT+CGG | + | chr5_1:55960843-55960862 | None:intergenic | 35.0% | |
| ACCTTGATCTGAACTTAATG+TGG | - | chr5_1:55960913-55960932 | Msa0738240:intron | 35.0% | |
| ACCACATTAAGTTCAGATCA+AGG | + | chr5_1:55960917-55960936 | None:intergenic | 35.0% | |
| ATCTGAACTTAATGTGGTGT+AGG | - | chr5_1:55960919-55960938 | Msa0738240:intron | 35.0% | |
| CATTAACTTTGCAGAGTCAA+AGG | + | chr5_1:55960989-55961008 | None:intergenic | 35.0% | |
| ! | ATCCTGGTTGTTGAATTTTC+TGG | - | chr5_1:55961161-55961180 | Msa0738240:intron | 35.0% |
| TAAAGCAGCAACAATAAGTG+AGG | + | chr5_1:55961355-55961374 | None:intergenic | 35.0% | |
| !! | CTTATTGTTGCTGCTTTATC+CGG | - | chr5_1:55961357-55961376 | Msa0738240:intron | 35.0% |
| !! | TTATTGTTGCTGCTTTATCC+GGG | - | chr5_1:55961358-55961377 | Msa0738240:intron | 35.0% |
| GTTGTTTGCATAAGCTATTC+CGG | - | chr5_1:55961982-55962001 | Msa0738240:intron | 35.0% | |
| AATTATCTCCATAAGCACTC+CGG | + | chr5_1:55962004-55962023 | None:intergenic | 35.0% | |
| ! | ATGTCATGAGTTGTTTCCAT+AGG | - | chr5_1:55962041-55962060 | Msa0738240:intron | 35.0% |
| CAAAAATCTCATTGGCAACT+AGG | + | chr5_1:55962134-55962153 | None:intergenic | 35.0% | |
| ! | CTAGTTGCCAATGAGATTTT+TGG | - | chr5_1:55962132-55962151 | Msa0738240:intron | 35.0% |
| AATAGGTGTTTGCGTAGTTA+TGG | - | chr5_1:55962230-55962249 | Msa0738240:intron | 35.0% | |
| ATAGGTGTTTGCGTAGTTAT+GGG | - | chr5_1:55962231-55962250 | Msa0738240:intron | 35.0% | |
| ! | TTTTGACATCCCAACTATGT+TGG | + | chr5_1:55962260-55962279 | None:intergenic | 35.0% |
| AATCAGTTTAGGTGATTGGA+AGG | - | chr5_1:55962431-55962450 | Msa0738240:intron | 35.0% | |
| TGTTGTCTTGAATAGTTGAC+AGG | + | chr5_1:55962545-55962564 | None:intergenic | 35.0% | |
| GATTCAAGAAGTTTATGACG+AGG | - | chr5_1:55962618-55962637 | Msa0738240:intron | 35.0% | |
| TGTATTACCAACATTGGTCA+TGG | - | chr5_1:55962666-55962685 | Msa0738240:intron | 35.0% | |
| TACAGCATGAACTGTATAGA+AGG | + | chr5_1:55962770-55962789 | None:intergenic | 35.0% | |
| !!! | TTTTTTCAACTTCGCCAACA+AGG | + | chr5_1:55962798-55962817 | None:intergenic | 35.0% |
| TATACCTTCACAACAAGAAG+AGG | + | chr5_1:55963029-55963048 | None:intergenic | 35.0% | |
| CAAGCTAGACAAGTTAACAA+TGG | - | chr5_1:55963262-55963281 | Msa0738240:intron | 35.0% | |
| TATGTTGCTATGTCAGCATA+AGG | - | chr5_1:55963432-55963451 | Msa0738240:intron | 35.0% | |
| CAGCATAAGGAAATACTATG+TGG | - | chr5_1:55963445-55963464 | Msa0738240:intron | 35.0% | |
| TAAGGAAATACTATGTGGCA+TGG | - | chr5_1:55963450-55963469 | Msa0738240:intron | 35.0% | |
| GCACCAACACTTAAGATTAA+AGG | + | chr5_1:55963616-55963635 | None:intergenic | 35.0% | |
| TTCTTCAAATTCAGGTACAC+AGG | - | chr5_1:55963773-55963792 | Msa0738240:intron | 35.0% | |
| ATTAAGATGATCCGCTATGA+AGG | - | chr5_1:55963804-55963823 | Msa0738240:intron | 35.0% | |
| TTAAGATGATCCGCTATGAA+GGG | - | chr5_1:55963805-55963824 | Msa0738240:intron | 35.0% | |
| ATCCATTAAACCCTTCATAG+CGG | + | chr5_1:55963818-55963837 | None:intergenic | 35.0% | |
| !! | TCCCAACACTTTAAAGTCAA+AGG | - | chr5_1:55963950-55963969 | Msa0738240:intron | 35.0% |
| AGTCAAAGGTTGTGTGAATT+TGG | - | chr5_1:55963964-55963983 | Msa0738240:intron | 35.0% | |
| TTCGTGAGTAATGAATCTGA+GGG | + | chr5_1:55964010-55964029 | None:intergenic | 35.0% | |
| TAGGAAATAGACTGTGTCAT+TGG | - | chr5_1:55964061-55964080 | Msa0738240:CDS | 35.0% | |
| !!! | AATTTTGGCTCCTCCAAAAG+TGG | + | chr5_1:55958626-55958645 | None:intergenic | 40.0% |
| ! | GGAGCCAAAATTGATTCTTG+AGG | - | chr5_1:55958386-55958405 | Msa0738240:intron | 40.0% |
| !!! | AATTTTGGCTCCTCCAAAAG+TGG | - | chr5_1:55958626-55958645 | Msa0738240:intron | 40.0% |
| !! | TGTTTTGTCTCCACTTTTGG+AGG | + | chr5_1:55958639-55958658 | None:intergenic | 40.0% |
| GACCGATCCTTACAATTTCA+AGG | + | chr5_1:55958927-55958946 | None:intergenic | 40.0% | |
| GACAGAGGGACTAAATTGAT+CGG | - | chr5_1:55959148-55959167 | Msa0738240:CDS | 40.0% | |
| TTCAGTCCTCGAAATTGTCA+GGG | + | chr5_1:55959266-55959285 | None:intergenic | 40.0% | |
| TTTCAGTCCTCGAAATTGTC+AGG | + | chr5_1:55959267-55959286 | None:intergenic | 40.0% | |
| ATACGGGTAGTAAACTTGGA+GGG | + | chr5_1:55959702-55959721 | None:intergenic | 40.0% | |
| AATACGGGTAGTAAACTTGG+AGG | + | chr5_1:55959703-55959722 | None:intergenic | 40.0% | |
| !! | GGTTATTTGAGGGGTTAGTT+AGG | - | chr5_1:55959732-55959751 | Msa0738240:intron | 40.0% |
| !! | GTTAGTTAGGTATGATGGAC+AGG | - | chr5_1:55959745-55959764 | Msa0738240:intron | 40.0% |
| ACAGGGAAATCTTTGTGAAG+TGG | - | chr5_1:55959763-55959782 | Msa0738240:intron | 40.0% | |
| TGTGAAGTGGTTGTCACTAT+AGG | - | chr5_1:55959776-55959795 | Msa0738240:intron | 40.0% | |
| GTGAAGTGGTTGTCACTATA+GGG | - | chr5_1:55959777-55959796 | Msa0738240:intron | 40.0% | |
| GTCACTATAGGGAGAGAATA+AGG | - | chr5_1:55959788-55959807 | Msa0738240:intron | 40.0% | |
| TACTTTCACTGGCAAGTGTT+AGG | - | chr5_1:55959915-55959934 | Msa0738240:intron | 40.0% | |
| ACTTTCACTGGCAAGTGTTA+GGG | - | chr5_1:55959916-55959935 | Msa0738240:intron | 40.0% | |
| TGTGACTAAGGGGTTGTTAT+GGG | + | chr5_1:55960114-55960133 | None:intergenic | 40.0% | |
| ! | TGGAAGTATGTGTGACTAAG+GGG | + | chr5_1:55960124-55960143 | None:intergenic | 40.0% |
| ! | CTGGAAGTATGTGTGACTAA+GGG | + | chr5_1:55960125-55960144 | None:intergenic | 40.0% |
| TAAAGTCTAAACTTGCCACC+TGG | + | chr5_1:55960144-55960163 | None:intergenic | 40.0% | |
| ! | TGGTTCTTAAGCTGCTTTGA+TGG | + | chr5_1:55960306-55960325 | None:intergenic | 40.0% |
| ! | AGTTTTTCATCAAGATCGGG+AGG | - | chr5_1:55960408-55960427 | Msa0738240:intron | 40.0% |
| ! | GTTTTTCATCAAGATCGGGA+GGG | - | chr5_1:55960409-55960428 | Msa0738240:intron | 40.0% |
| ! | TTTTTCATCAAGATCGGGAG+GGG | - | chr5_1:55960410-55960429 | Msa0738240:intron | 40.0% |
| CTGATCCAACGTAATCACAT+AGG | + | chr5_1:55960470-55960489 | None:intergenic | 40.0% | |
| CTATGTGATTACGTTGGATC+AGG | - | chr5_1:55960468-55960487 | Msa0738240:CDS | 40.0% | |
| TGTGAAATTGCAGGGTTACT+CGG | + | chr5_1:55960759-55960778 | None:intergenic | 40.0% | |
| !! | TTCTGGCTTGTGAAATTGCA+GGG | + | chr5_1:55960767-55960786 | None:intergenic | 40.0% |
| !! | TTTCTGGCTTGTGAAATTGC+AGG | + | chr5_1:55960768-55960787 | None:intergenic | 40.0% |
| ATCTTGCACCCGATTCATAT+TGG | - | chr5_1:55960831-55960850 | Msa0738240:intron | 40.0% | |
| CAAACCCTCCAATATGAATC+GGG | + | chr5_1:55960842-55960861 | None:intergenic | 40.0% | |
| TGCCAGAAAATTCAACAACC+AGG | + | chr5_1:55961166-55961185 | None:intergenic | 40.0% | |
| TCTCATATTCTCTAGTGCAG+CGG | + | chr5_1:55961298-55961317 | None:intergenic | 40.0% | |
| GCACTAGAGAATATGAGACT+AGG | - | chr5_1:55961300-55961319 | Msa0738240:intron | 40.0% | |
| TGCTGTTGACAAATCCGATA+TGG | - | chr5_1:55961475-55961494 | Msa0738240:intron | 40.0% | |
| CGAGTAACAACTAGCCATAT+CGG | + | chr5_1:55961492-55961511 | None:intergenic | 40.0% | |
| ! | ATGGCTAGTTCCATAAGCAA+GGG | + | chr5_1:55961722-55961741 | None:intergenic | 40.0% |
| GATAGACTTTACCTACCACA+TGG | + | chr5_1:55961741-55961760 | None:intergenic | 40.0% | |
| ATACTATTTGGGAGAGCCTA+TGG | + | chr5_1:55962060-55962079 | None:intergenic | 40.0% | |
| CAGGTCACCAAAAATCTCAT+TGG | + | chr5_1:55962142-55962161 | None:intergenic | 40.0% | |
| TAGGTGTTTGCGTAGTTATG+GGG | - | chr5_1:55962232-55962251 | Msa0738240:intron | 40.0% | |
| AGTTGACAGGAACAAGAGAA+GGG | + | chr5_1:55962532-55962551 | None:intergenic | 40.0% | |
| TAGTTGACAGGAACAAGAGA+AGG | + | chr5_1:55962533-55962552 | None:intergenic | 40.0% | |
| ! | GAAGGGTGTATTACCAACAT+TGG | - | chr5_1:55962660-55962679 | Msa0738240:intron | 40.0% |
| CATGCTGTATGAAACCTTGT+TGG | - | chr5_1:55962781-55962800 | Msa0738240:intron | 40.0% | |
| TAGTAGCGTAACTGCTTTAG+AGG | - | chr5_1:55962826-55962845 | Msa0738240:intron | 40.0% | |
| CTTCACAACAAGAAGAGGAT+AGG | + | chr5_1:55963024-55963043 | None:intergenic | 40.0% | |
| ! | CTATCCTCTTCTTGTTGTGA+AGG | - | chr5_1:55963022-55963041 | Msa0738240:intron | 40.0% |
| GGAGCTGACAAAATTAAACG+AGG | - | chr5_1:55963173-55963192 | Msa0738240:CDS | 40.0% | |
| GCAACATAAGCATATTGGGA+GGG | + | chr5_1:55963420-55963439 | None:intergenic | 40.0% | |
| AGCAACATAAGCATATTGGG+AGG | + | chr5_1:55963421-55963440 | None:intergenic | 40.0% | |
| ! | GGTAATACGAAGCACTAACA+CGG | - | chr5_1:55963513-55963532 | Msa0738240:intron | 40.0% |
| ACAATTCCTTCTGTTGTGTC+CGG | + | chr5_1:55963542-55963561 | None:intergenic | 40.0% | |
| TATAAGTGTCAGTGTCGTGT+CGG | - | chr5_1:55963569-55963588 | Msa0738240:intron | 40.0% | |
| !! | TAAGTGTTGGTGCGACATAT+AGG | - | chr5_1:55963623-55963642 | Msa0738240:intron | 40.0% |
| ATCCGCTATGAAGGGTTTAA+TGG | - | chr5_1:55963813-55963832 | Msa0738240:intron | 40.0% | |
| !!! | TGCTGCAGCTGTTTTGTTTA+TGG | - | chr5_1:55963878-55963897 | Msa0738240:CDS | 40.0% |
| GTTCGTGAGTAATGAATCTG+AGG | + | chr5_1:55964011-55964030 | None:intergenic | 40.0% | |
| !! | AAAGCGTCCGACATGTTTTG+AGG | + | chr5_1:55957878-55957897 | None:intergenic | 45.0% |
| ATGTCGGACGCTTTGATCAA+TGG | - | chr5_1:55957884-55957903 | Msa0738240:three_prime_UTR | 45.0% | |
| GGACGCTTTGATCAATGGAT+TGG | - | chr5_1:55957889-55957908 | Msa0738240:three_prime_UTR | 45.0% | |
| !! | GCTTTGATCAATGGATTGGC+TGG | - | chr5_1:55957893-55957912 | Msa0738240:three_prime_UTR | 45.0% |
| AACTGATCGTGATCCGAAGA+AGG | - | chr5_1:55958081-55958100 | Msa0738240:CDS | 45.0% | |
| ACTGATCGTGATCCGAAGAA+GGG | - | chr5_1:55958082-55958101 | Msa0738240:CDS | 45.0% | |
| AGGTTGTGAAACAAGAGGGA+TGG | - | chr5_1:55958782-55958801 | Msa0738240:intron | 45.0% | |
| GGTTGTGAAACAAGAGGGAT+GGG | - | chr5_1:55958783-55958802 | Msa0738240:intron | 45.0% | |
| AGTTGACCCTGACAATTTCG+AGG | - | chr5_1:55959257-55959276 | Msa0738240:intron | 45.0% | |
| !! | GAGGGGTTAGTTAGGTATGA+TGG | - | chr5_1:55959740-55959759 | Msa0738240:intron | 45.0% |
| AAAAGCAGGGAAGCTTCTCT+TGG | - | chr5_1:55959955-55959974 | Msa0738240:intron | 45.0% | |
| ATGGGGGAAGACTTGACTAA+AGG | + | chr5_1:55960096-55960115 | None:intergenic | 45.0% | |
| TGACTAAGGGGTTGTTATGG+GGG | + | chr5_1:55960112-55960131 | None:intergenic | 45.0% | |
| GTGACTAAGGGGTTGTTATG+GGG | + | chr5_1:55960113-55960132 | None:intergenic | 45.0% | |
| GTGTGACTAAGGGGTTGTTA+TGG | + | chr5_1:55960115-55960134 | None:intergenic | 45.0% | |
| ! | CCTGGAAGTATGTGTGACTA+AGG | + | chr5_1:55960126-55960145 | None:intergenic | 45.0% |
| CCTTAGTCACACATACTTCC+AGG | - | chr5_1:55960123-55960142 | Msa0738240:intron | 45.0% | |
| TAGTCACACATACTTCCAGG+TGG | - | chr5_1:55960126-55960145 | Msa0738240:intron | 45.0% | |
| ! | TTTTCATCAAGATCGGGAGG+GGG | - | chr5_1:55960411-55960430 | Msa0738240:intron | 45.0% |
| GTGATTACGTTGGATCAGGA+AGG | - | chr5_1:55960472-55960491 | Msa0738240:CDS | 45.0% | |
| TTGCACCCGATTCATATTGG+AGG | - | chr5_1:55960834-55960853 | Msa0738240:intron | 45.0% | |
| TGCACCCGATTCATATTGGA+GGG | - | chr5_1:55960835-55960854 | Msa0738240:intron | 45.0% | |
| TCATATTGGAGGGTTTGAGC+AGG | - | chr5_1:55960845-55960864 | Msa0738240:intron | 45.0% | |
| GAGAATATGAGACTAGGCAG+TGG | - | chr5_1:55961306-55961325 | Msa0738240:intron | 45.0% | |
| GCTAGTTGTTACTCGTATGC+AGG | - | chr5_1:55961497-55961516 | Msa0738240:intron | 45.0% | |
| AGACGCATAGAAAAGAGTCG+AGG | - | chr5_1:55961632-55961651 | Msa0738240:intron | 45.0% | |
| ! | TGGCTAGTTCCATAAGCAAG+GGG | + | chr5_1:55961721-55961740 | None:intergenic | 45.0% |
| ! | CATGGCTAGTTCCATAAGCA+AGG | + | chr5_1:55961723-55961742 | None:intergenic | 45.0% |
| TGCTTATGGAACTAGCCATG+TGG | - | chr5_1:55961723-55961742 | Msa0738240:intron | 45.0% | |
| TATGGAACTAGCCATGTGGT+AGG | - | chr5_1:55961727-55961746 | Msa0738240:intron | 45.0% | |
| ! | AAGCTATTCCGGAGTGCTTA+TGG | - | chr5_1:55961993-55962012 | Msa0738240:intron | 45.0% |
| ATTGGCAACTAGGACCTGTT+TGG | + | chr5_1:55962124-55962143 | None:intergenic | 45.0% | |
| AGGTGTTTGCGTAGTTATGG+GGG | - | chr5_1:55962233-55962252 | Msa0738240:intron | 45.0% | |
| GATGTCAAAACTGCCATGTG+AGG | - | chr5_1:55962270-55962289 | Msa0738240:intron | 45.0% | |
| TATACGGCAAAAGCCTCACA+TGG | + | chr5_1:55962286-55962305 | None:intergenic | 45.0% | |
| CAAGAAGTTTATGACGAGGC+TGG | - | chr5_1:55962622-55962641 | Msa0738240:intron | 45.0% | |
| ! | TTATGACGAGGCTGGAGTTT+TGG | - | chr5_1:55962630-55962649 | Msa0738240:intron | 45.0% |
| ! | TATGACGAGGCTGGAGTTTT+GGG | - | chr5_1:55962631-55962650 | Msa0738240:intron | 45.0% |
| !!! | TGGAGTTTTGGGTTTCTGGA+AGG | - | chr5_1:55962642-55962661 | Msa0738240:intron | 45.0% |
| !!! | GGAGTTTTGGGTTTCTGGAA+GGG | - | chr5_1:55962643-55962662 | Msa0738240:intron | 45.0% |
| CAACGTACCATGACCAATGT+TGG | + | chr5_1:55962676-55962695 | None:intergenic | 45.0% | |
| !!! | GTTGCTTTTGTTGCTATCGC+AGG | - | chr5_1:55963231-55963250 | Msa0738240:intron | 45.0% |
| ! | TTTTGTTGCTATCGCAGGCA+AGG | - | chr5_1:55963236-55963255 | Msa0738240:intron | 45.0% |
| GGGAACATTCTTTGCAAGCA+AGG | + | chr5_1:55963934-55963953 | None:intergenic | 45.0% | |
| !! | ATCAATGGATTGGCTGGAGC+TGG | - | chr5_1:55957899-55957918 | Msa0738240:three_prime_UTR | 50.0% |
| TGAAACAAGAGGGATGGGAG+AGG | - | chr5_1:55958788-55958807 | Msa0738240:intron | 50.0% | |
| ! | GTAGCTGTACCGACAAGTGA+TGG | + | chr5_1:55958832-55958851 | None:intergenic | 50.0% |
| TGTCGGTACAGCTACATCTC+AGG | - | chr5_1:55958837-55958856 | Msa0738240:intron | 50.0% | |
| GGGTAGTAAACTTGGAGGGT+TGG | + | chr5_1:55959698-55959717 | None:intergenic | 50.0% | |
| GGGGTTGCAAGATTGCAACT+AGG | - | chr5_1:55960430-55960449 | Msa0738240:intron | 50.0% | |
| ATGAGACTAGGCAGTGGTGA+TGG | - | chr5_1:55961312-55961331 | Msa0738240:intron | 50.0% | |
| CATCTGACAACCTCGGATCA+GGG | + | chr5_1:55961666-55961685 | None:intergenic | 50.0% | |
| ACTGTTGAGCCCCTTGCTTA+TGG | - | chr5_1:55961709-55961728 | Msa0738240:intron | 50.0% | |
| CTAGTTGGCTAGACCCTGTT+AGG | - | chr5_1:55961842-55961861 | Msa0738240:intron | 50.0% | |
| GGTGTTTGCGTAGTTATGGG+GGG | - | chr5_1:55962234-55962253 | Msa0738240:intron | 50.0% | |
| TTATGGGGGGCCAACATAGT+TGG | - | chr5_1:55962247-55962266 | Msa0738240:intron | 50.0% | |
| TATGGGGGGCCAACATAGTT+GGG | - | chr5_1:55962248-55962267 | Msa0738240:intron | 50.0% | |
| !!! | AGGCTGGAGTTTTGGGTTTC+TGG | - | chr5_1:55962638-55962657 | Msa0738240:intron | 50.0% |
| AAGGCATGTCCGAGTGTCTT+GGG | + | chr5_1:55963597-55963616 | None:intergenic | 50.0% | |
| ! | AAAGGCATGTCCGAGTGTCT+TGG | + | chr5_1:55963598-55963617 | None:intergenic | 50.0% |
| !! | AATGGATTGGCTGGAGCTGG+TGG | - | chr5_1:55957902-55957921 | Msa0738240:three_prime_UTR | 55.0% |
| GAGGGATGGGAGAGGTTGTA+TGG | - | chr5_1:55958796-55958815 | Msa0738240:intron | 55.0% | |
| GGATGGGAGAGGTTGTATGG+AGG | - | chr5_1:55958799-55958818 | Msa0738240:intron | 55.0% | |
| GGAGAGGTTGTATGGAGGCT+TGG | - | chr5_1:55958804-55958823 | Msa0738240:intron | 55.0% | |
| TACTCGGGTCATGCACAACC+CGG | + | chr5_1:55960733-55960752 | None:intergenic | 55.0% | |
| AGGGTTACTCGGAGCTACTC+GGG | + | chr5_1:55960748-55960767 | None:intergenic | 55.0% | |
| CAGGGTTACTCGGAGCTACT+CGG | + | chr5_1:55960749-55960768 | None:intergenic | 55.0% | |
| !! | GGCAGTGGTGATGGATCAGT+TGG | - | chr5_1:55961321-55961340 | Msa0738240:intron | 55.0% |
| GGAAAACTCTCCCTGATCCG+AGG | - | chr5_1:55961653-55961672 | Msa0738240:intron | 55.0% | |
| GCATCTGACAACCTCGGATC+AGG | + | chr5_1:55961667-55961686 | None:intergenic | 55.0% | |
| ! | CGAAGCACTAACACGGACAC+CGG | - | chr5_1:55963520-55963539 | Msa0738240:intron | 55.0% |
| ! | GATTGGCTGGAGCTGGTGGA+GGG | - | chr5_1:55957906-55957925 | Msa0738240:three_prime_UTR | 60.0% |
| GGCTTGGCGCCATCACTTGT+CGG | - | chr5_1:55958820-55958839 | Msa0738240:intron | 60.0% | |
| CTCGGAGCTGTCGCTAAGCT+TGG | - | chr5_1:55962984-55963003 | Msa0738240:intron | 60.0% | |
| CGGACACCGGACACAACAGA+AGG | - | chr5_1:55963533-55963552 | Msa0738240:intron | 60.0% | |
| ! | GTGTCGGTGCCCAAGACACT+CGG | - | chr5_1:55963585-55963604 | Msa0738240:intron | 60.0% |
| !! | GGATTGGCTGGAGCTGGTGG+AGG | - | chr5_1:55957905-55957924 | Msa0738240:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 55957690 | 55964286 | 55957690 | ID=Msa0738240;Name=Msa0738240 |
| chr5_1 | mRNA | 55957690 | 55964286 | 55957690 | ID=Msa0738240-mRNA-1;Parent=Msa0738240;Name=Msa0738240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=170|1|1|1|0.83|0.69|13|258|335 |
| chr5_1 | exon | 55957690 | 55957741 | 55957690 | ID=Msa0738240-mRNA-1:exon:15822;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55957790 | 55958189 | 55957790 | ID=Msa0738240-mRNA-1:exon:15821;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55958669 | 55958723 | 55958669 | ID=Msa0738240-mRNA-1:exon:15820;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55958933 | 55959001 | 55958933 | ID=Msa0738240-mRNA-1:exon:15819;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55959129 | 55959218 | 55959129 | ID=Msa0738240-mRNA-1:exon:15818;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55959289 | 55959357 | 55959289 | ID=Msa0738240-mRNA-1:exon:15817;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55960232 | 55960342 | 55960232 | ID=Msa0738240-mRNA-1:exon:15816;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55960458 | 55960512 | 55960458 | ID=Msa0738240-mRNA-1:exon:15815;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55960597 | 55960727 | 55960597 | ID=Msa0738240-mRNA-1:exon:15814;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55963118 | 55963192 | 55963118 | ID=Msa0738240-mRNA-1:exon:15813;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55963835 | 55963912 | 55963835 | ID=Msa0738240-mRNA-1:exon:15812;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55964012 | 55964175 | 55964012 | ID=Msa0738240-mRNA-1:exon:15811;Parent=Msa0738240-mRNA-1 |
| chr5_1 | exon | 55964200 | 55964286 | 55964200 | ID=Msa0738240-mRNA-1:exon:15810;Parent=Msa0738240-mRNA-1 |
| chr5_1 | five_prime_UTR | 55964200 | 55964286 | 55964200 | ID=Msa0738240-mRNA-1:five_prime_utr;Parent=Msa0738240-mRNA-1 |
| chr5_1 | five_prime_UTR | 55964093 | 55964175 | 55964093 | ID=Msa0738240-mRNA-1:five_prime_utr;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55964012 | 55964092 | 55964012 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55963835 | 55963912 | 55963835 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55963118 | 55963192 | 55963118 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55960597 | 55960727 | 55960597 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55960458 | 55960512 | 55960458 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55960232 | 55960342 | 55960232 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55959289 | 55959357 | 55959289 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55959129 | 55959218 | 55959129 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55958933 | 55959001 | 55958933 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55958669 | 55958723 | 55958669 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | CDS | 55957996 | 55958189 | 55957996 | ID=Msa0738240-mRNA-1:cds;Parent=Msa0738240-mRNA-1 |
| chr5_1 | three_prime_UTR | 55957790 | 55957995 | 55957790 | ID=Msa0738240-mRNA-1:three_prime_utr;Parent=Msa0738240-mRNA-1 |
| chr5_1 | three_prime_UTR | 55957690 | 55957741 | 55957690 | ID=Msa0738240-mRNA-1:three_prime_utr;Parent=Msa0738240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
