Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203560 | sp|Q9C566|CYP40_ARATH | 71.111 | 360 | 103 | 1 | 1 | 359 | 1 | 360 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203560 | G7LGD2 | 99.444 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 0.0 | 739 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1203560 | 0.804803 | 1.812584e-49 | -8.615850e-47 |
| Msa0021290 | Msa1203560 | 0.812828 | 3.482914e-51 | -8.615850e-47 |
| Msa0021320 | Msa1203560 | 0.823210 | 1.565651e-53 | -8.615850e-47 |
| Msa0032780 | Msa1203560 | 0.826080 | 3.300287e-54 | -8.615850e-47 |
| Msa0040220 | Msa1203560 | 0.884534 | 1.765966e-71 | -8.615850e-47 |
| Msa0087910 | Msa1203560 | 0.892261 | 1.868355e-74 | -8.615850e-47 |
| Msa0622230 | Msa1203560 | 0.802803 | 4.717563e-49 | -8.615850e-47 |
| Msa0653060 | Msa1203560 | 0.833512 | 5.112420e-56 | -8.615850e-47 |
| Msa0717380 | Msa1203560 | 0.813795 | 2.135992e-51 | -8.615850e-47 |
| Msa0748350 | Msa1203560 | 0.802239 | 6.166684e-49 | -8.615850e-47 |
| Msa0799830 | Msa1203560 | 0.826912 | 2.090378e-54 | -8.615850e-47 |
| Msa0134580 | Msa1203560 | 0.870630 | 1.262170e-66 | -8.615850e-47 |
| Msa0192050 | Msa1203560 | 0.800415 | 1.457142e-48 | -8.615850e-47 |
| Msa0194940 | Msa1203560 | 0.849857 | 2.470818e-60 | -8.615850e-47 |
| Msa0210330 | Msa1203560 | 0.817334 | 3.479783e-52 | -8.615850e-47 |
| Msa0210360 | Msa1203560 | 0.815788 | 7.726420e-52 | -8.615850e-47 |
| Msa0222730 | Msa1203560 | 0.809721 | 1.645213e-50 | -8.615850e-47 |
| Msa0228540 | Msa1203560 | 0.843725 | 1.174544e-58 | -8.615850e-47 |
| Msa0374240 | Msa1203560 | 0.807760 | 4.319450e-50 | -8.615850e-47 |
| Msa0426090 | Msa1203560 | 0.800357 | 1.497277e-48 | -8.615850e-47 |
| Msa0426250 | Msa1203560 | 0.833108 | 6.445179e-56 | -8.615850e-47 |
| Msa0475810 | Msa1203560 | 0.874762 | 5.243287e-68 | -8.615850e-47 |
| Msa0481520 | Msa1203560 | 0.827111 | 1.874028e-54 | -8.615850e-47 |
| Msa1024180 | Msa1203560 | 0.828533 | 8.528456e-55 | -8.615850e-47 |
| Msa1025200 | Msa1203560 | 0.808930 | 2.430757e-50 | -8.615850e-47 |
| Msa1037290 | Msa1203560 | 0.804785 | 1.828022e-49 | -8.615850e-47 |
| Msa1040160 | Msa1203560 | 0.813225 | 2.850635e-51 | -8.615850e-47 |
| Msa1050100 | Msa1203560 | 0.845070 | 5.106309e-59 | -8.615850e-47 |
| Msa1078870 | Msa1203560 | 0.844072 | 9.482001e-59 | -8.615850e-47 |
| Msa1078980 | Msa1203560 | 0.830933 | 2.221303e-55 | -8.615850e-47 |
| Msa1083370 | Msa1203560 | 0.820278 | 7.462077e-53 | -8.615850e-47 |
| Msa0297830 | Msa1203560 | 0.802034 | 6.794474e-49 | -8.615850e-47 |
| Msa0301220 | Msa1203560 | 0.802967 | 4.364047e-49 | -8.615850e-47 |
| Msa0315430 | Msa1203560 | 0.834446 | 2.983083e-56 | -8.615850e-47 |
| Msa0335840 | Msa1203560 | 0.819880 | 9.204062e-53 | -8.615850e-47 |
| Msa1109310 | Msa1203560 | 0.847138 | 1.397982e-59 | -8.615850e-47 |
| Msa1124850 | Msa1203560 | 0.811435 | 7.010998e-51 | -8.615850e-47 |
| Msa1126690 | Msa1203560 | 0.800461 | 1.425633e-48 | -8.615850e-47 |
| Msa1147700 | Msa1203560 | 0.803204 | 3.897462e-49 | -8.615850e-47 |
| Msa1152120 | Msa1203560 | 0.809697 | 1.664300e-50 | -8.615850e-47 |
| Msa1164150 | Msa1203560 | 0.801078 | 1.066997e-48 | -8.615850e-47 |
| Msa1165640 | Msa1203560 | 0.804666 | 1.935685e-49 | -8.615850e-47 |
| Msa1167540 | Msa1203560 | 0.857327 | 1.759759e-62 | -8.615850e-47 |
| Msa1169180 | Msa1203560 | 0.834844 | 2.369963e-56 | -8.615850e-47 |
| Msa1203560 | Msa1208330 | 0.813680 | 2.264539e-51 | -8.615850e-47 |
| Msa1203560 | Msa1255830 | 0.864121 | 1.527224e-64 | -8.615850e-47 |
| Msa1203560 | Msa1255850 | 0.883936 | 2.941032e-71 | -8.615850e-47 |
| Msa1203560 | Msa1258460 | 0.817550 | 3.111400e-52 | -8.615850e-47 |
| Msa1203560 | Msa1258540 | 0.819940 | 8.918609e-53 | -8.615850e-47 |
| Msa1203560 | Msa1296090 | 0.826445 | 2.702821e-54 | -8.615850e-47 |
| Msa1203560 | Msa1311400 | 0.846597 | 1.965877e-59 | -8.615850e-47 |
| Msa1203560 | Msa1332250 | 0.834000 | 3.858934e-56 | -8.615850e-47 |
| Msa1203560 | Msa1368920 | 0.803757 | 2.993326e-49 | -8.615850e-47 |
| Msa1203560 | Msa1418770 | 0.804995 | 1.652536e-49 | -8.615850e-47 |
| Msa1203560 | Msa1426120 | 0.844118 | 9.212909e-59 | -8.615850e-47 |
| Msa0518590 | Msa1203560 | 0.800932 | 1.142774e-48 | -8.615850e-47 |
| Msa0529900 | Msa1203560 | 0.854355 | 1.300467e-61 | -8.615850e-47 |
| Msa0573550 | Msa1203560 | 0.826528 | 2.581891e-54 | -8.615850e-47 |
| Msa0861320 | Msa1203560 | 0.827418 | 1.581789e-54 | -8.615850e-47 |
| Msa0929700 | Msa1203560 | 0.808975 | 2.377845e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203560 | MtrunA17_Chr8g0374621 | 99.444 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 0.0 | 739 |
| Msa1203560 | MtrunA17_Chr4g0045321 | 73.961 | 361 | 93 | 1 | 1 | 360 | 1 | 361 | 0.0 | 565 |
| Msa1203560 | MtrunA17_Chr7g0274841 | 63.429 | 175 | 60 | 3 | 1 | 174 | 1 | 172 | 8.25e-71 | 218 |
| Msa1203560 | MtrunA17_Chr7g0260441 | 60.773 | 181 | 68 | 2 | 3 | 182 | 6 | 184 | 2.07e-69 | 229 |
| Msa1203560 | MtrunA17_Chr4g0038431 | 61.143 | 175 | 64 | 3 | 1 | 174 | 1 | 172 | 2.11e-69 | 215 |
| Msa1203560 | MtrunA17_Chr3g0104751 | 60.355 | 169 | 65 | 2 | 5 | 173 | 35 | 201 | 3.33e-64 | 202 |
| Msa1203560 | MtrunA17_Chr3g0113441 | 58.480 | 171 | 69 | 2 | 5 | 175 | 65 | 233 | 1.32e-63 | 202 |
| Msa1203560 | MtrunA17_Chr3g0145501 | 58.140 | 172 | 68 | 3 | 5 | 175 | 13 | 181 | 2.34e-63 | 200 |
| Msa1203560 | MtrunA17_Chr1g0213971 | 57.558 | 172 | 62 | 2 | 5 | 173 | 78 | 241 | 3.69e-61 | 196 |
| Msa1203560 | MtrunA17_Chr7g0270991 | 55.030 | 169 | 68 | 1 | 5 | 173 | 97 | 257 | 1.14e-59 | 193 |
| Msa1203560 | MtrunA17_Chr1g0193711 | 57.647 | 170 | 63 | 2 | 5 | 173 | 86 | 247 | 2.53e-59 | 192 |
| Msa1203560 | MtrunA17_Chr8g0353571 | 55.233 | 172 | 73 | 2 | 3 | 173 | 17 | 185 | 3.50e-58 | 186 |
| Msa1203560 | MtrunA17_Chr4g0037281 | 56.471 | 170 | 72 | 2 | 5 | 173 | 47 | 215 | 4.30e-57 | 185 |
| Msa1203560 | MtrunA17_Chr3g0138061 | 47.500 | 200 | 100 | 3 | 3 | 201 | 9 | 204 | 3.54e-46 | 168 |
| Msa1203560 | MtrunA17_Chr1g0149061 | 49.708 | 171 | 82 | 3 | 6 | 175 | 9 | 176 | 3.38e-43 | 159 |
| Msa1203560 | MtrunA17_Chr8g0351571 | 49.664 | 149 | 62 | 3 | 18 | 165 | 10 | 146 | 7.57e-40 | 138 |
| Msa1203560 | MtrunA17_Chr2g0321111 | 50.649 | 154 | 63 | 4 | 18 | 170 | 471 | 612 | 2.23e-37 | 142 |
| Msa1203560 | MtrunA17_Chr7g0266721 | 44.848 | 165 | 73 | 5 | 4 | 167 | 10 | 157 | 3.67e-35 | 126 |
| Msa1203560 | MtrunA17_Chr5g0401141 | 40.102 | 197 | 83 | 6 | 18 | 213 | 354 | 516 | 5.27e-32 | 126 |
| Msa1203560 | MtrunA17_Chr2g0288371 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 1.19e-21 | 95.9 |
| Msa1203560 | MtrunA17_Chr6g0484281 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.46e-17 | 84.0 |
| Msa1203560 | MtrunA17_Chr8g0377771 | 34.756 | 164 | 97 | 4 | 203 | 359 | 383 | 543 | 4.10e-17 | 82.8 |
| Msa1203560 | MtrunA17_Chr8g0339141 | 34.965 | 143 | 89 | 3 | 219 | 360 | 409 | 548 | 1.19e-16 | 81.3 |
| Msa1203560 | MtrunA17_Chr8g0357591 | 33.962 | 159 | 84 | 5 | 18 | 167 | 10 | 156 | 1.70e-16 | 80.9 |
| Msa1203560 | MtrunA17_Chr7g0234801 | 33.333 | 174 | 105 | 5 | 194 | 359 | 369 | 539 | 2.44e-15 | 77.0 |
| Msa1203560 | MtrunA17_Chr3g0122871 | 62.500 | 48 | 18 | 0 | 104 | 151 | 62 | 109 | 9.56e-15 | 70.1 |
| Msa1203560 | MtrunA17_Chr7g0255551 | 34.437 | 151 | 95 | 3 | 209 | 358 | 374 | 521 | 4.04e-14 | 73.6 |
| Msa1203560 | MtrunA17_Chr1g0199071 | 33.758 | 157 | 81 | 7 | 17 | 170 | 88 | 224 | 1.12e-13 | 69.7 |
| Msa1203560 | MtrunA17_Chr1g0163031 | 31.818 | 154 | 89 | 4 | 17 | 170 | 87 | 224 | 2.26e-12 | 65.9 |
| Msa1203560 | MtrunA17_Chr1g0152361 | 32.164 | 171 | 92 | 6 | 203 | 359 | 212 | 372 | 1.19e-11 | 65.5 |
| Msa1203560 | MtrunA17_Chr2g0305071 | 24.623 | 199 | 101 | 7 | 16 | 171 | 90 | 282 | 2.75e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203560 | AT2G15790.1 | 71.111 | 360 | 103 | 1 | 1 | 359 | 1 | 360 | 0.0 | 545 |
| Msa1203560 | AT3G63400.2 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 5.70e-75 | 237 |
| Msa1203560 | AT3G63400.3 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 5.36e-73 | 237 |
| Msa1203560 | AT3G63400.4 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 5.36e-73 | 237 |
| Msa1203560 | AT3G63400.1 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 5.36e-73 | 237 |
| Msa1203560 | AT4G34870.1 | 62.857 | 175 | 61 | 3 | 1 | 174 | 1 | 172 | 6.01e-71 | 219 |
| Msa1203560 | AT2G16600.1 | 63.006 | 173 | 60 | 3 | 3 | 174 | 4 | 173 | 8.69e-71 | 219 |
| Msa1203560 | AT4G38740.1 | 61.714 | 175 | 63 | 3 | 1 | 174 | 1 | 172 | 3.96e-70 | 217 |
| Msa1203560 | AT2G21130.1 | 61.494 | 174 | 63 | 3 | 3 | 175 | 4 | 174 | 6.39e-70 | 217 |
| Msa1203560 | AT3G56070.1 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 1.24e-69 | 216 |
| Msa1203560 | AT3G56070.2 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 1.24e-69 | 216 |
| Msa1203560 | AT5G13120.2 | 57.386 | 176 | 64 | 2 | 5 | 177 | 87 | 254 | 9.56e-64 | 204 |
| Msa1203560 | AT5G13120.1 | 57.386 | 176 | 64 | 2 | 5 | 177 | 91 | 258 | 9.81e-64 | 204 |
| Msa1203560 | AT2G29960.1 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 1.02e-63 | 202 |
| Msa1203560 | AT2G29960.3 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 1.02e-63 | 202 |
| Msa1203560 | AT3G55920.1 | 60.000 | 170 | 66 | 2 | 5 | 174 | 60 | 227 | 1.22e-63 | 202 |
| Msa1203560 | AT3G62030.3 | 58.580 | 169 | 62 | 1 | 5 | 173 | 95 | 255 | 2.00e-62 | 200 |
| Msa1203560 | AT3G62030.1 | 58.580 | 169 | 62 | 1 | 5 | 173 | 96 | 256 | 2.09e-62 | 200 |
| Msa1203560 | AT3G62030.2 | 58.580 | 169 | 62 | 1 | 5 | 173 | 149 | 309 | 4.95e-62 | 201 |
| Msa1203560 | AT5G58710.1 | 58.580 | 169 | 68 | 2 | 5 | 173 | 36 | 202 | 1.68e-60 | 194 |
| Msa1203560 | AT2G38730.1 | 56.395 | 172 | 71 | 2 | 3 | 173 | 31 | 199 | 3.06e-59 | 190 |
| Msa1203560 | AT2G29960.2 | 57.396 | 169 | 60 | 3 | 5 | 173 | 33 | 189 | 3.80e-58 | 187 |
| Msa1203560 | AT4G34960.1 | 53.846 | 169 | 77 | 1 | 5 | 173 | 48 | 215 | 3.11e-57 | 186 |
| Msa1203560 | AT2G16600.2 | 55.491 | 173 | 51 | 3 | 3 | 174 | 4 | 151 | 5.03e-57 | 183 |
| Msa1203560 | AT4G34960.2 | 57.377 | 122 | 51 | 1 | 5 | 126 | 48 | 168 | 1.10e-43 | 149 |
| Msa1203560 | AT4G32420.1 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 9.05e-43 | 159 |
| Msa1203560 | AT4G32420.5 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 9.05e-43 | 159 |
| Msa1203560 | AT4G32420.3 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 9.05e-43 | 159 |
| Msa1203560 | AT4G32420.6 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 9.05e-43 | 159 |
| Msa1203560 | AT3G22920.1 | 46.703 | 182 | 85 | 6 | 1 | 179 | 1 | 173 | 4.48e-41 | 144 |
| Msa1203560 | AT4G32420.4 | 48.993 | 149 | 76 | 0 | 3 | 151 | 6 | 154 | 1.35e-40 | 152 |
| Msa1203560 | AT1G01940.1 | 48.993 | 149 | 63 | 3 | 18 | 165 | 10 | 146 | 1.69e-38 | 135 |
| Msa1203560 | AT3G44600.1 | 50.649 | 154 | 63 | 3 | 18 | 170 | 485 | 626 | 2.12e-38 | 145 |
| Msa1203560 | AT2G36130.1 | 43.636 | 165 | 75 | 5 | 4 | 167 | 10 | 157 | 1.20e-34 | 125 |
| Msa1203560 | AT5G67530.1 | 44.156 | 154 | 73 | 4 | 18 | 170 | 353 | 494 | 1.80e-32 | 128 |
| Msa1203560 | AT4G33060.1 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 2.51e-25 | 107 |
| Msa1203560 | AT1G53720.2 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 5.27e-19 | 87.4 |
| Msa1203560 | AT1G53720.1 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.89e-18 | 87.0 |
| Msa1203560 | AT3G25230.1 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 4.34e-18 | 85.9 |
| Msa1203560 | AT3G25230.2 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 5.36e-18 | 85.9 |
| Msa1203560 | AT5G48570.1 | 32.121 | 165 | 102 | 3 | 203 | 360 | 395 | 556 | 2.03e-15 | 77.8 |
| Msa1203560 | AT1G58450.1 | 35.172 | 145 | 83 | 4 | 219 | 359 | 17 | 154 | 5.88e-13 | 66.6 |
Find 114 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCAAGGCTTTGCGCTATT+TGG | 0.169942 | 8_1:-57886616 | Msa1203560:CDS |
| CAGAGAAGAGCACTGCTTTA+AGG | 0.171724 | 8_1:-57886441 | Msa1203560:CDS |
| CAGGCCTGTAAATTAAAATT+AGG | 0.205661 | 8_1:-57885681 | Msa1203560:CDS |
| TCTCTCTGCACCGGCGAAAA+AGG | 0.252295 | 8_1:-57887553 | Msa1203560:CDS |
| GATGGGAAGCATGTGGTGTT+TGG | 0.308347 | 8_1:-57887274 | Msa1203560:CDS |
| AATTAGCCTTGATGCGGATA+TGG | 0.331853 | 8_1:-57884033 | Msa1203560:exon |
| TGTATTACTGACCTTCTTCC+TGG | 0.341120 | 8_1:+57884188 | None:intergenic |
| CTGTTGAGCTTGGTCCGGTT+GGG | 0.343040 | 8_1:-57887219 | Msa1203560:CDS |
| ATGGGAAGCATGTGGTGTTT+GGG | 0.357969 | 8_1:-57887273 | Msa1203560:CDS |
| GCTCAAAGAGTTTGTCAAAA+TGG | 0.375853 | 8_1:+57883846 | None:intergenic |
| CTTTGGAAATGAACACTATA+AGG | 0.386961 | 8_1:-57887014 | Msa1203560:intron |
| GACGACGAGGACGCCGCATT+TGG | 0.389302 | 8_1:-57887296 | Msa1203560:CDS |
| CAGTGGAGCTTTACTTGATT+CGG | 0.393358 | 8_1:-57885652 | Msa1203560:CDS |
| AATAGTCACCAACCATCATT+TGG | 0.395698 | 8_1:+57884845 | None:intergenic |
| TTGCTGAAGGGGAGGATGAA+GGG | 0.404415 | 8_1:-57887147 | Msa1203560:CDS |
| TGAAAGGGATTGGAGTTGTT+AGG | 0.404472 | 8_1:-57887243 | Msa1203560:CDS |
| GGGAAGGTTGTGAAAGGGAT+TGG | 0.404533 | 8_1:-57887253 | Msa1203560:CDS |
| GTTGAATCTATCAAGGGCTT+TGG | 0.411683 | 8_1:-57887031 | Msa1203560:CDS |
| ACCTAAAACACGAACGGAAA+GGG | 0.412914 | 8_1:-57887375 | Msa1203560:CDS |
| CAATGACCTGGATGCCGCTC+TGG | 0.426988 | 8_1:-57884897 | Msa1203560:CDS |
| GGAAGATGGATTTCTTGAAA+TGG | 0.436360 | 8_1:+57887503 | None:intergenic |
| AACTGACTCCCATTGGTGTT+CGG | 0.442751 | 8_1:+57887328 | None:intergenic |
| TGCGCTATTTGGACATGTGT+TGG | 0.444418 | 8_1:-57886605 | Msa1203560:CDS |
| ATCTCCGCCTCCGACGGAAC+CGG | 0.449439 | 8_1:-57887442 | Msa1203560:CDS |
| ATCCACCATTCAAGCTCCTC+CGG | 0.449666 | 8_1:+57887061 | None:intergenic |
| ATTGCTGAAGGGGAGGATGA+AGG | 0.452826 | 8_1:-57887148 | Msa1203560:CDS |
| GCGCTATTTGGACATGTGTT+GGG | 0.453371 | 8_1:-57886604 | Msa1203560:CDS |
| TCTGTTGAGCTTGGTCCGGT+TGG | 0.454918 | 8_1:-57887220 | Msa1203560:CDS |
| ATGTTGTGATTGCTGATTGT+GGG | 0.460587 | 8_1:-57887174 | Msa1203560:CDS |
| GGCTTGGTATCAAGATCAAC+AGG | 0.465685 | 8_1:+57887082 | None:intergenic |
| ACGAGGACGCCGCATTTGGA+TGG | 0.473500 | 8_1:-57887292 | Msa1203560:CDS |
| AGCTCTGTTTCGCAAAGGCC+AGG | 0.474119 | 8_1:-57885598 | Msa1203560:intron |
| TGTTGAGCTTGGTCCGGTTG+GGG | 0.477465 | 8_1:-57887218 | Msa1203560:CDS |
| GTTGTTAGGTCTGTTGAGCT+TGG | 0.477926 | 8_1:-57887229 | Msa1203560:CDS |
| GAATGCTGTTGAATCTATCA+AGG | 0.478392 | 8_1:-57887038 | Msa1203560:CDS |
| TCGAAGTACACTCTTGGGTT+CGG | 0.485037 | 8_1:+57887661 | None:intergenic |
| CTTATGTCGAAGTACACTCT+TGG | 0.486685 | 8_1:+57887655 | None:intergenic |
| CCAAGCCGGAGGAGCTTGAA+TGG | 0.487486 | 8_1:-57887066 | Msa1203560:CDS |
| TCAAATCTTTACCAACAGTT+CGG | 0.490310 | 8_1:-57886407 | Msa1203560:intron |
| GGTTGCTGATAGACATGATA+AGG | 0.494242 | 8_1:-57884082 | Msa1203560:CDS |
| GAAAACTTGTCAGTTGTGAC+TGG | 0.495156 | 8_1:+57883727 | None:intergenic |
| TTTGACGACACGGTGGAAGA+TGG | 0.495856 | 8_1:+57887489 | None:intergenic |
| AGCTATCCAGAGCGGCATCC+AGG | 0.495882 | 8_1:+57884891 | None:intergenic |
| TGCTGAAGGGGAGGATGAAG+GGG | 0.498218 | 8_1:-57887146 | Msa1203560:CDS |
| GGTCGATCATTCTCCCCAAC+CGG | 0.499007 | 8_1:+57887205 | None:intergenic |
| TGACTCGCCGCCGGTTCCGT+CGG | 0.502311 | 8_1:+57887432 | None:intergenic |
| GGAGAATGATCGACCGGAGC+AGG | 0.502619 | 8_1:-57887197 | Msa1203560:CDS |
| TTATGTCGAAGTACACTCTT+GGG | 0.506372 | 8_1:+57887656 | None:intergenic |
| CCATTCAAGCTCCTCCGGCT+TGG | 0.508001 | 8_1:+57887066 | None:intergenic |
| TTTCGCCGGTGCAGAGAGAT+CGG | 0.511855 | 8_1:+57887557 | None:intergenic |
| GCCGCCGGTTCCGTCGGAGG+CGG | 0.516656 | 8_1:+57887438 | None:intergenic |
| AGGCGGAGATGTCACCGCCT+TGG | 0.518147 | 8_1:+57887455 | None:intergenic |
| ATCTTCCACCGTGTCGTCAA+AGG | 0.519364 | 8_1:-57887487 | Msa1203560:CDS |
| ATACCGGTCCGAACACCAAT+GGG | 0.524056 | 8_1:-57887336 | Msa1203560:CDS |
| TTAGAGTTGGAGCCAAATGA+TGG | 0.524064 | 8_1:-57884857 | Msa1203560:intron |
| CTTCAAGAGAGCATTAGAGT+TGG | 0.526509 | 8_1:-57884870 | Msa1203560:CDS |
| AAGCATCGGCGGTGAACTCG+AGG | 0.527582 | 8_1:-57887635 | Msa1203560:CDS |
| GTGTTTGGGAAGGTTGTGAA+AGG | 0.528665 | 8_1:-57887259 | Msa1203560:CDS |
| TAGGTCTGTTGAGCTTGGTC+CGG | 0.531881 | 8_1:-57887224 | Msa1203560:CDS |
| TTGTGGGGAGATTGCTGAAG+GGG | 0.543269 | 8_1:-57887158 | Msa1203560:CDS |
| GATGTTGTGATTGCTGATTG+TGG | 0.548690 | 8_1:-57887175 | Msa1203560:CDS |
| CTCGCCGCCGGTTCCGTCGG+AGG | 0.551251 | 8_1:+57887435 | None:intergenic |
| GCAATCACAACATCCTGCTC+CGG | 0.552793 | 8_1:+57887184 | None:intergenic |
| ACTCCCATTGGTGTTCGGAC+CGG | 0.553025 | 8_1:+57887333 | None:intergenic |
| ACAGAAGCAAGATTATAAGA+TGG | 0.553869 | 8_1:-57886652 | Msa1203560:intron |
| ACCGTAGATTGACTCGCCGC+CGG | 0.554056 | 8_1:+57887423 | None:intergenic |
| TGGGGAGATTGCTGAAGGGG+AGG | 0.554625 | 8_1:-57887155 | Msa1203560:CDS |
| TGTTTGGGAAGGTTGTGAAA+GGG | 0.554643 | 8_1:-57887258 | Msa1203560:CDS |
| TTTGGACATGTGTTGGGAGA+AGG | 0.556697 | 8_1:-57886598 | Msa1203560:CDS |
| CTTGAAATGGAGAGGGACGT+TGG | 0.557692 | 8_1:+57887516 | None:intergenic |
| GACCTAAAACACGAACGGAA+AGG | 0.557928 | 8_1:-57887376 | Msa1203560:CDS |
| GTACGCAATTGCCAGGAAGA+AGG | 0.562491 | 8_1:-57884199 | Msa1203560:intron |
| TGTGATACTTACCGAACTGT+TGG | 0.563843 | 8_1:+57886396 | None:intergenic |
| CGAGGACGCCGCATTTGGAT+GGG | 0.564333 | 8_1:-57887291 | Msa1203560:CDS |
| ACCGGCGGCGAGTCAATCTA+CGG | 0.568908 | 8_1:-57887424 | Msa1203560:CDS |
| GAAGCATGTGGTGTTTGGGA+AGG | 0.570028 | 8_1:-57887269 | Msa1203560:CDS |
| ATGGATTTCTTGAAATGGAG+AGG | 0.571440 | 8_1:+57887508 | None:intergenic |
| GTCAAAGGCTTCATGATCCA+AGG | 0.574138 | 8_1:-57887472 | Msa1203560:CDS |
| CATACACCATATCCGCATCA+AGG | 0.575826 | 8_1:+57884027 | None:intergenic |
| TGGATTTCTTGAAATGGAGA+GGG | 0.579737 | 8_1:+57887509 | None:intergenic |
| TCCGCCTCCGACGGAACCGG+CGG | 0.580073 | 8_1:-57887439 | Msa1203560:CDS |
| GGTGACATCTCCGCCTCCGA+CGG | 0.583678 | 8_1:-57887448 | Msa1203560:CDS |
| CTTTGTTATAGAAAATCACT+AGG | 0.584499 | 8_1:+57883819 | None:intergenic |
| GATTGTGGGGAGATTGCTGA+AGG | 0.584654 | 8_1:-57887160 | Msa1203560:CDS |
| AATACCGGTCCGAACACCAA+TGG | 0.584723 | 8_1:-57887337 | Msa1203560:CDS |
| GGTTGGGGAGAATGATCGAC+CGG | 0.607475 | 8_1:-57887203 | Msa1203560:CDS |
| GGATATGGTGTATGTGGCGA+TGG | 0.608582 | 8_1:-57884018 | Msa1203560:three_prime_UTR |
| GACATGTGTTGGGAGAAGGA+TGG | 0.614412 | 8_1:-57886594 | Msa1203560:CDS |
| AGCATCGGCGGTGAACTCGA+GGG | 0.617751 | 8_1:-57887634 | Msa1203560:CDS |
| ATGTTCAATTAGCCTTGATG+CGG | 0.622340 | 8_1:-57884039 | Msa1203560:exon |
| TCATGAAGCCTTTGACGACA+CGG | 0.625678 | 8_1:+57887479 | None:intergenic |
| TGTTGATCTTGATACCAAGC+CGG | 0.625762 | 8_1:-57887080 | Msa1203560:CDS |
| TGTTGTGATTGCTGATTGTG+GGG | 0.627931 | 8_1:-57887173 | Msa1203560:CDS |
| AGCCGGAGGAGCTTGAATGG+TGG | 0.631915 | 8_1:-57887063 | Msa1203560:CDS |
| TGATGCGGATATGGTGTATG+TGG | 0.632119 | 8_1:-57884024 | Msa1203560:three_prime_UTR |
| AATTTCCGATCTCTCTGCAC+CGG | 0.632806 | 8_1:-57887562 | Msa1203560:CDS |
| ATTTCGACCTAAAACACGAA+CGG | 0.634503 | 8_1:-57887381 | Msa1203560:CDS |
| TCGGACTTTGCAATGCACGA+TGG | 0.636187 | 8_1:-57885633 | Msa1203560:CDS |
| AATGCTGTTGAATCTATCAA+GGG | 0.636468 | 8_1:-57887037 | Msa1203560:CDS |
| ATTGTGGGGAGATTGCTGAA+GGG | 0.637501 | 8_1:-57887159 | Msa1203560:CDS |
| TGGAGAGGGACGTTGGTGTG+TGG | 0.640483 | 8_1:+57887523 | None:intergenic |
| GTATATGTTACTCAATGACC+TGG | 0.641203 | 8_1:-57884909 | Msa1203560:CDS |
| GCAAAAGCTCTGTTTCGCAA+AGG | 0.644842 | 8_1:-57885603 | Msa1203560:CDS |
| GTGTACTTCGACATAAGCAT+CGG | 0.649168 | 8_1:-57887649 | Msa1203560:CDS |
| GAGAAGGATGGTGTTGACCA+AGG | 0.659869 | 8_1:-57886582 | Msa1203560:intron |
| ACATGCTTCCCATCCAAATG+CGG | 0.664004 | 8_1:+57887283 | None:intergenic |
| TACTTCGACATAAGCATCGG+CGG | 0.673491 | 8_1:-57887646 | Msa1203560:CDS |
| TGATCTTGATACCAAGCCGG+AGG | 0.689161 | 8_1:-57887077 | Msa1203560:CDS |
| TTAAAATTAGGTGACCTCAG+TGG | 0.703190 | 8_1:-57885669 | Msa1203560:CDS |
| GCATTTGGATGGGAAGCATG+TGG | 0.713375 | 8_1:-57887281 | Msa1203560:CDS |
| TGAAGCCTTTGACGACACGG+TGG | 0.743535 | 8_1:+57887482 | None:intergenic |
| TCTCTTGAAGCTATCCAGAG+CGG | 0.756413 | 8_1:+57884883 | None:intergenic |
| AAAGGCTTCATGATCCAAGG+CGG | 0.764461 | 8_1:-57887469 | Msa1203560:CDS |
| AATCAAGTAAAGCTCCACTG+AGG | 0.768633 | 8_1:+57885655 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATGTTTTAGTTTTATTT+GGG | - | chr8_1:57884682-57884701 | Msa1203560:intron | 10.0% |
| !! | AAATTACTATATATAATACA+TGG | + | chr8_1:57886473-57886492 | None:intergenic | 10.0% |
| !!! | GTTATTAACTTTTTTAAAGA+TGG | - | chr8_1:57884311-57884330 | Msa1203560:intron | 15.0% |
| !!! | CTTAATGTTTTAGTTTTATT+TGG | - | chr8_1:57884681-57884700 | Msa1203560:intron | 15.0% |
| !!! | TAAATGTGAATTAAATTTTC+AGG | - | chr8_1:57885735-57885754 | Msa1203560:intron | 15.0% |
| !!! | TCATGTTTTGTAAATTTAGT+TGG | - | chr8_1:57885401-57885420 | Msa1203560:intron | 20.0% |
| !! | GTAAGTATTTGTAAAAACAT+GGG | + | chr8_1:57885503-57885522 | None:intergenic | 20.0% |
| !! | AGTAAGTATTTGTAAAAACA+TGG | + | chr8_1:57885504-57885523 | None:intergenic | 20.0% |
| !! | ACAAATTGACAAAAAGTTTA+AGG | - | chr8_1:57886142-57886161 | Msa1203560:intron | 20.0% |
| !! | CAAATTGACAAAAAGTTTAA+GGG | - | chr8_1:57886143-57886162 | Msa1203560:intron | 20.0% |
| !! | AAATTGACAAAAAGTTTAAG+GGG | - | chr8_1:57886144-57886163 | Msa1203560:intron | 20.0% |
| !! | TAAAGTAGCAAATTACAATT+CGG | + | chr8_1:57886237-57886256 | None:intergenic | 20.0% |
| !!! | GTAATTTGCTATTTGTTTTT+TGG | - | chr8_1:57886486-57886505 | Msa1203560:intron | 20.0% |
| !! | AATTACTTTCTTATAACACT+GGG | - | chr8_1:57886688-57886707 | Msa1203560:intron | 20.0% |
| !! | TTCATATAGAAACATATCTT+TGG | - | chr8_1:57886782-57886801 | Msa1203560:intron | 20.0% |
| !!! | CAAAGTTAATTTGATATTTC+TGG | - | chr8_1:57887163-57887182 | Msa1203560:CDS | 20.0% |
| !!! | GTTTTTTCTTAAATGGTATT+AGG | - | chr8_1:57887684-57887703 | Msa1203560:exon | 20.0% |
| !! | AAATTTTCGTCTTCGAAATT+TGG | + | chr8_1:57884038-57884057 | None:intergenic | 25.0% |
| ! | ATAAGGTGAATTTCAAAGAA+TGG | - | chr8_1:57884438-57884457 | Msa1203560:intron | 25.0% |
| ! | TCAAAGAATGGTTATAGAAT+AGG | - | chr8_1:57884450-57884469 | Msa1203560:intron | 25.0% |
| ! | CAAAGAATGGTTATAGAATA+GGG | - | chr8_1:57884451-57884470 | Msa1203560:intron | 25.0% |
| ! | TTGATGCATATCTTTGTTAA+AGG | - | chr8_1:57884494-57884513 | Msa1203560:intron | 25.0% |
| ! | AATAATCGAAAACAACAATG+AGG | + | chr8_1:57884526-57884545 | None:intergenic | 25.0% |
| ! | CAAATAAAAGATACACACTA+GGG | + | chr8_1:57884553-57884572 | None:intergenic | 25.0% |
| !! | GCATATAGAATAGTTTTTCT+CGG | - | chr8_1:57884582-57884601 | Msa1203560:intron | 25.0% |
| ! | ACTAAAACATTAAGCTTACA+TGG | + | chr8_1:57884675-57884694 | None:intergenic | 25.0% |
| !!! | AGTTTTATTTGGGAATATAG+TGG | - | chr8_1:57884692-57884711 | Msa1203560:intron | 25.0% |
| !! | TTTCATCATTTTATGTGACT+AGG | - | chr8_1:57885063-57885082 | Msa1203560:intron | 25.0% |
| !! | TTCATCATTTTATGTGACTA+GGG | - | chr8_1:57885064-57885083 | Msa1203560:intron | 25.0% |
| !! | AAAATCATGAGAAGAGTTTT+AGG | + | chr8_1:57885208-57885227 | None:intergenic | 25.0% |
| ! | AGCAATCAATTATTGAAAGT+CGG | + | chr8_1:57885254-57885273 | None:intergenic | 25.0% |
| !!! | AAGACTTTAGTTTTGGAAAT+TGG | - | chr8_1:57885318-57885337 | Msa1203560:intron | 25.0% |
| !!! | AGACTTTAGTTTTGGAAATT+GGG | - | chr8_1:57885319-57885338 | Msa1203560:intron | 25.0% |
| ! | TAGTAAAATAGTCATTCACA+AGG | + | chr8_1:57885474-57885493 | None:intergenic | 25.0% |
| ! | TTACAAATACTTACTCTCTT+AGG | - | chr8_1:57885509-57885528 | Msa1203560:intron | 25.0% |
| ! | TACAAATACTTACTCTCTTA+GGG | - | chr8_1:57885510-57885529 | Msa1203560:intron | 25.0% |
| !!! | GTCACCTAATTTTAATTTAC+AGG | + | chr8_1:57885761-57885780 | None:intergenic | 25.0% |
| ! | ATAGATGACATTGTTAAACA+CGG | + | chr8_1:57885911-57885930 | None:intergenic | 25.0% |
| !!! | AATTTGATGGTTTTGACTTT+TGG | + | chr8_1:57886288-57886307 | None:intergenic | 25.0% |
| ! | AGTCAAAACCATCAAATTTA+TGG | - | chr8_1:57886290-57886309 | Msa1203560:intron | 25.0% |
| ! | GTCAAAACCATCAAATTTAT+GGG | - | chr8_1:57886291-57886310 | Msa1203560:intron | 25.0% |
| ! | CTATATATAATACATGGCTA+TGG | + | chr8_1:57886467-57886486 | None:intergenic | 25.0% |
| ! | CAATTACTTTCTTATAACAC+TGG | - | chr8_1:57886687-57886706 | Msa1203560:intron | 25.0% |
| ! | ATTACTTTCTTATAACACTG+GGG | - | chr8_1:57886689-57886708 | Msa1203560:intron | 25.0% |
| ! | GATTAAAGACAACAATGAAA+GGG | + | chr8_1:57886900-57886919 | None:intergenic | 25.0% |
| ! | TGATTAAAGACAACAATGAA+AGG | + | chr8_1:57886901-57886920 | None:intergenic | 25.0% |
| ! | ATTTCATGTTGAATTGATTG+TGG | + | chr8_1:57886985-57887004 | None:intergenic | 25.0% |
| ! | TTAACAAGTCAAAGTGTAAA+TGG | - | chr8_1:57887019-57887038 | Msa1203560:CDS | 25.0% |
| ! | ATGTTTCATTTCATACACAA+AGG | + | chr8_1:57887073-57887092 | None:intergenic | 25.0% |
| !! | TTTATTCTGTTTACTGCTTT+TGG | - | chr8_1:57887325-57887344 | Msa1203560:CDS | 25.0% |
| !! | CTTTGTTATAGAAAATCACT+AGG | + | chr8_1:57887619-57887638 | None:intergenic | 25.0% |
| !!! | TCTACTCGTTTTTTCTTAAA+TGG | - | chr8_1:57887677-57887696 | Msa1203560:exon | 25.0% |
| ! | AATAAAAAACTGACTCCCAT+TGG | + | chr8_1:57884117-57884136 | None:intergenic | 30.0% |
| AATGCTGTTGAATCTATCAA+GGG | - | chr8_1:57884398-57884417 | Msa1203560:intron | 30.0% | |
| ! | CTTTGGAAATGAACACTATA+AGG | - | chr8_1:57884421-57884440 | Msa1203560:intron | 30.0% |
| CCAAATAAAAGATACACACT+AGG | + | chr8_1:57884554-57884573 | None:intergenic | 30.0% | |
| ! | CCTAGTGTGTATCTTTTATT+TGG | - | chr8_1:57884551-57884570 | Msa1203560:intron | 30.0% |
| TAATCAGCAGATCATAAGAA+TGG | + | chr8_1:57884728-57884747 | None:intergenic | 30.0% | |
| ACAGAAGCAAGATTATAAGA+TGG | - | chr8_1:57884783-57884802 | Msa1203560:intron | 30.0% | |
| AGAAAAACAGTAAGTAACCA+CGG | + | chr8_1:57884934-57884953 | None:intergenic | 30.0% | |
| TCAAATCTTTACCAACAGTT+CGG | - | chr8_1:57885028-57885047 | Msa1203560:intron | 30.0% | |
| !! | TGCATTCAAGACTTTAGTTT+TGG | - | chr8_1:57885311-57885330 | Msa1203560:intron | 30.0% |
| TAAAATAGTCATTCACAAGG+TGG | + | chr8_1:57885471-57885490 | None:intergenic | 30.0% | |
| AGAATGTGACACATTATAAC+AGG | + | chr8_1:57885678-57885697 | None:intergenic | 30.0% | |
| CAGGCCTGTAAATTAAAATT+AGG | - | chr8_1:57885754-57885773 | Msa1203560:intron | 30.0% | |
| AGAGTTTCAATAGAGAAAGT+AGG | - | chr8_1:57885875-57885894 | Msa1203560:intron | 30.0% | |
| ! | CATAGAACTTTTATGCTACT+AGG | - | chr8_1:57886009-57886028 | Msa1203560:intron | 30.0% |
| CTGGTGTGAATTGTTTAATA+GGG | - | chr8_1:57886074-57886093 | Msa1203560:intron | 30.0% | |
| AATTGTTTAATAGGGAGGAA+AGG | - | chr8_1:57886082-57886101 | Msa1203560:intron | 30.0% | |
| ATTGTTTAATAGGGAGGAAA+GGG | - | chr8_1:57886083-57886102 | Msa1203560:intron | 30.0% | |
| AATTTGTACCAAGATGGATA+GGG | + | chr8_1:57886129-57886148 | None:intergenic | 30.0% | |
| TTTGTCAATTTGTACCAAGA+TGG | + | chr8_1:57886135-57886154 | None:intergenic | 30.0% | |
| TTACAATTCGGTACTTAAGA+AGG | + | chr8_1:57886225-57886244 | None:intergenic | 30.0% | |
| TGATAACTATAACCAGTCAT+AGG | - | chr8_1:57886409-57886428 | Msa1203560:CDS | 30.0% | |
| GATAACTATAACCAGTCATA+GGG | - | chr8_1:57886410-57886429 | Msa1203560:CDS | 30.0% | |
| ATAACTATAACCAGTCATAG+GGG | - | chr8_1:57886411-57886430 | Msa1203560:CDS | 30.0% | |
| !! | TTTTTGGTCTGCTTAATTTC+AGG | - | chr8_1:57886502-57886521 | Msa1203560:intron | 30.0% |
| TTTATTTCATTCATTGCCTG+TGG | - | chr8_1:57886628-57886647 | Msa1203560:CDS | 30.0% | |
| GTCAAAGTGTAAATGGAATT+AGG | - | chr8_1:57887026-57887045 | Msa1203560:CDS | 30.0% | |
| ATTGAGATCCAAAACATCTT+TGG | - | chr8_1:57887103-57887122 | Msa1203560:CDS | 30.0% | |
| ! | GTCATAATCCAAAGATGTTT+TGG | + | chr8_1:57887114-57887133 | None:intergenic | 30.0% |
| GAAATGGTAAAGGAAGAAAA+AGG | + | chr8_1:57887273-57887292 | None:intergenic | 30.0% | |
| ! | CTGAAACAATCAGATTTTTG+TGG | - | chr8_1:57887441-57887460 | Msa1203560:CDS | 30.0% |
| TTTCGGAAGAGAGGAAAAAA+GGG | + | chr8_1:57883751-57883770 | None:intergenic | 35.0% | |
| ! | TTTTCGGAAGAGAGGAAAAA+AGG | + | chr8_1:57883752-57883771 | None:intergenic | 35.0% |
| TTATGTCGAAGTACACTCTT+GGG | + | chr8_1:57883782-57883801 | None:intergenic | 35.0% | |
| TGGATTTCTTGAAATGGAGA+GGG | + | chr8_1:57883929-57883948 | None:intergenic | 35.0% | |
| ATGGATTTCTTGAAATGGAG+AGG | + | chr8_1:57883930-57883949 | None:intergenic | 35.0% | |
| ! | GGAAGATGGATTTCTTGAAA+TGG | + | chr8_1:57883935-57883954 | None:intergenic | 35.0% |
| ATTTCGACCTAAAACACGAA+CGG | - | chr8_1:57884054-57884073 | Msa1203560:CDS | 35.0% | |
| ! | ATTTTATCCATGGCGAATAC+CGG | - | chr8_1:57884083-57884102 | Msa1203560:CDS | 35.0% |
| !!! | AGTTTTTTATTACGACGACG+AGG | - | chr8_1:57884126-57884145 | Msa1203560:intron | 35.0% |
| ! | ATGTTGTGATTGCTGATTGT+GGG | - | chr8_1:57884261-57884280 | Msa1203560:intron | 35.0% |
| ! | ATGGTGATACTTTTGCTGAT+TGG | - | chr8_1:57884330-57884349 | Msa1203560:intron | 35.0% |
| GAATGCTGTTGAATCTATCA+AGG | - | chr8_1:57884397-57884416 | Msa1203560:intron | 35.0% | |
| !! | GATCTGTGCTATTCTGTTTT+TGG | - | chr8_1:57884902-57884921 | Msa1203560:CDS | 35.0% |
| TTCTCTAGTAACTCATCTCT+TGG | - | chr8_1:57884953-57884972 | Msa1203560:intron | 35.0% | |
| GACTTGTCTCATCAACTATT+AGG | - | chr8_1:57885095-57885114 | Msa1203560:intron | 35.0% | |
| AACTACACAACTAAAGCTTG+TGG | + | chr8_1:57885162-57885181 | None:intergenic | 35.0% | |
| ! | AGCTTTAGTTGTGTAGTTAG+AGG | - | chr8_1:57885164-57885183 | Msa1203560:intron | 35.0% |
| ATCAATTATTGAAAGTCGGC+TGG | + | chr8_1:57885250-57885269 | None:intergenic | 35.0% | |
| TAGGTCTGCATGATTCAAAA+TGG | - | chr8_1:57885631-57885650 | Msa1203560:CDS | 35.0% | |
| TTAAAATTAGGTGACCTCAG+TGG | - | chr8_1:57885766-57885785 | Msa1203560:intron | 35.0% | |
| GCATACAATATGACTGTATG+AGG | + | chr8_1:57886055-57886074 | None:intergenic | 35.0% | |
| CATACAGTCATATTGTATGC+TGG | - | chr8_1:57886055-57886074 | Msa1203560:intron | 35.0% | |
| GCTGGTGTGAATTGTTTAAT+AGG | - | chr8_1:57886073-57886092 | Msa1203560:intron | 35.0% | |
| GTGTGAATTGTTTAATAGGG+AGG | - | chr8_1:57886077-57886096 | Msa1203560:intron | 35.0% | |
| CAATTTGTACCAAGATGGAT+AGG | + | chr8_1:57886130-57886149 | None:intergenic | 35.0% | |
| TGACAAAAAGTTTAAGGGGA+AGG | - | chr8_1:57886148-57886167 | Msa1203560:intron | 35.0% | |
| GACAAAAAGTTTAAGGGGAA+GGG | - | chr8_1:57886149-57886168 | Msa1203560:intron | 35.0% | |
| !!! | TTGATGGTTTTGACTTTTGG+AGG | + | chr8_1:57886285-57886304 | None:intergenic | 35.0% |
| CAGACTTCCCATAAATTTGA+TGG | + | chr8_1:57886301-57886320 | None:intergenic | 35.0% | |
| TTCTGTAAGAAAAAGGGGAA+GGG | + | chr8_1:57886372-57886391 | None:intergenic | 35.0% | |
| GGTTATAGTTATCAATTCCC+TGG | + | chr8_1:57886403-57886422 | None:intergenic | 35.0% | |
| GTATATGTTACTCAATGACC+TGG | - | chr8_1:57886526-57886545 | Msa1203560:intron | 35.0% | |
| AATAGTCACCAACCATCATT+TGG | + | chr8_1:57886593-57886612 | None:intergenic | 35.0% | |
| !! | TGAAAAGCATTTATGACCAC+AGG | + | chr8_1:57886647-57886666 | None:intergenic | 35.0% |
| TTGAGTGTAATGAACTTCCT+GGG | - | chr8_1:57886730-57886749 | Msa1203560:intron | 35.0% | |
| ! | AAACATATCTTTGGCTTACC+AGG | - | chr8_1:57886791-57886810 | Msa1203560:intron | 35.0% |
| ! | AACATATCTTTGGCTTACCA+GGG | - | chr8_1:57886792-57886811 | Msa1203560:intron | 35.0% |
| GAAGGAGTCTATTCATGATA+AGG | - | chr8_1:57886817-57886836 | Msa1203560:intron | 35.0% | |
| ! | CTATTTCTTGTCTCGACATT+GGG | + | chr8_1:57886843-57886862 | None:intergenic | 35.0% |
| ! | ACTATTTCTTGTCTCGACAT+TGG | + | chr8_1:57886844-57886863 | None:intergenic | 35.0% |
| ATTGTGGAAATGATGTGACT+TGG | + | chr8_1:57886969-57886988 | None:intergenic | 35.0% | |
| ! | GACAGCATTTGAAATGGTAA+AGG | + | chr8_1:57887283-57887302 | None:intergenic | 35.0% |
| GAACAAGACAGCATTTGAAA+TGG | + | chr8_1:57887289-57887308 | None:intergenic | 35.0% | |
| !! | TGTTTACTGCTTTTGGTTAC+AGG | - | chr8_1:57887332-57887351 | Msa1203560:CDS | 35.0% |
| !! | ATGTTCAATTAGCCTTGATG+CGG | - | chr8_1:57887396-57887415 | Msa1203560:CDS | 35.0% |
| GCTCAAAGAGTTTGTCAAAA+TGG | + | chr8_1:57887592-57887611 | None:intergenic | 35.0% | |
| CTTATGTCGAAGTACACTCT+TGG | + | chr8_1:57883783-57883802 | None:intergenic | 40.0% | |
| GTGTACTTCGACATAAGCAT+CGG | - | chr8_1:57883786-57883805 | Msa1203560:three_prime_UTR | 40.0% | |
| ! | GCAGAGAGATCGGAAATTTT+CGG | + | chr8_1:57883871-57883890 | None:intergenic | 40.0% |
| ACCTAAAACACGAACGGAAA+GGG | - | chr8_1:57884060-57884079 | Msa1203560:CDS | 40.0% | |
| ! | ACGGAAAGGGATTTTATCCA+TGG | - | chr8_1:57884073-57884092 | Msa1203560:CDS | 40.0% |
| TGTTTGGGAAGGTTGTGAAA+GGG | - | chr8_1:57884177-57884196 | Msa1203560:intron | 40.0% | |
| TGAAAGGGATTGGAGTTGTT+AGG | - | chr8_1:57884192-57884211 | Msa1203560:intron | 40.0% | |
| ! | GATGTTGTGATTGCTGATTG+TGG | - | chr8_1:57884260-57884279 | Msa1203560:intron | 40.0% |
| ! | TGTTGTGATTGCTGATTGTG+GGG | - | chr8_1:57884262-57884281 | Msa1203560:intron | 40.0% |
| TGTTGATCTTGATACCAAGC+CGG | - | chr8_1:57884355-57884374 | Msa1203560:intron | 40.0% | |
| GTTGAATCTATCAAGGGCTT+TGG | - | chr8_1:57884404-57884423 | Msa1203560:intron | 40.0% | |
| !!! | GGGAATATAGTGGCTAGTTT+TGG | - | chr8_1:57884702-57884721 | Msa1203560:intron | 40.0% |
| ! | TGATCTGCTGATTACCTTTG+TGG | - | chr8_1:57884734-57884753 | Msa1203560:intron | 40.0% |
| AATGCATCAGCATACCACAA+AGG | + | chr8_1:57884751-57884770 | None:intergenic | 40.0% | |
| !! | GGCTATCAAAAAGTATCGCA+AGG | - | chr8_1:57884804-57884823 | Msa1203560:intron | 40.0% |
| TGTGATACTTACCGAACTGT+TGG | + | chr8_1:57885042-57885061 | None:intergenic | 40.0% | |
| ATAGTCATTCACAAGGTGGT+AGG | + | chr8_1:57885467-57885486 | None:intergenic | 40.0% | |
| AAGCAGACCTACTCAGAAAA+GGG | + | chr8_1:57885603-57885622 | None:intergenic | 40.0% | |
| TAGGTCTGCTTCATTCAACT+AGG | - | chr8_1:57885612-57885631 | Msa1203560:CDS | 40.0% | |
| AATCAAGTAAAGCTCCACTG+AGG | + | chr8_1:57885783-57885802 | None:intergenic | 40.0% | |
| CAGTGGAGCTTTACTTGATT+CGG | - | chr8_1:57885783-57885802 | Msa1203560:intron | 40.0% | |
| TCTATTGAAAGATGCCAACC+TGG | + | chr8_1:57885858-57885877 | None:intergenic | 40.0% | |
| TTAATAGGGAGGAAAGGGTA+AGG | - | chr8_1:57886088-57886107 | Msa1203560:intron | 40.0% | |
| AGGAAAGGGTAAGGAAAAGA+AGG | - | chr8_1:57886097-57886116 | Msa1203560:intron | 40.0% | |
| GGAAAGGGTAAGGAAAAGAA+GGG | - | chr8_1:57886098-57886117 | Msa1203560:intron | 40.0% | |
| TAAGAAAAAGGGGAAGGGAA+TGG | + | chr8_1:57886367-57886386 | None:intergenic | 40.0% | |
| GTTCTGTAAGAAAAAGGGGA+AGG | + | chr8_1:57886373-57886392 | None:intergenic | 40.0% | |
| TGGGGGTTCTGTAAGAAAAA+GGG | + | chr8_1:57886378-57886397 | None:intergenic | 40.0% | |
| AGTTATCAATTCCCTGGTCT+GGG | + | chr8_1:57886397-57886416 | None:intergenic | 40.0% | |
| TAGTTATCAATTCCCTGGTC+TGG | + | chr8_1:57886398-57886417 | None:intergenic | 40.0% | |
| CATGATATATCCCCTATGAC+TGG | + | chr8_1:57886424-57886443 | None:intergenic | 40.0% | |
| !! | CTTCAAGAGAGCATTAGAGT+TGG | - | chr8_1:57886565-57886584 | Msa1203560:intron | 40.0% |
| TTAGAGTTGGAGCCAAATGA+TGG | - | chr8_1:57886578-57886597 | Msa1203560:intron | 40.0% | |
| GTTGAGTGTAATGAACTTCC+TGG | - | chr8_1:57886729-57886748 | Msa1203560:intron | 40.0% | |
| ! | TACAGCTTTATCAAGAACCC+AGG | + | chr8_1:57886750-57886769 | None:intergenic | 40.0% |
| GGGTTCTTGATAAAGCTGTA+AGG | - | chr8_1:57886750-57886769 | Msa1203560:intron | 40.0% | |
| AGACAACAATGAAAGGGAGA+GGG | + | chr8_1:57886894-57886913 | None:intergenic | 40.0% | |
| AAGACAACAATGAAAGGGAG+AGG | + | chr8_1:57886895-57886914 | None:intergenic | 40.0% | |
| CGTTTGTAAATCGTCCTGTT+CGG | - | chr8_1:57886930-57886949 | Msa1203560:intron | 40.0% | |
| ! | AAAAAGAGTACGCAATTGCC+AGG | - | chr8_1:57887229-57887248 | Msa1203560:CDS | 40.0% |
| TGTATTACTGACCTTCTTCC+TGG | + | chr8_1:57887250-57887269 | None:intergenic | 40.0% | |
| GGTTGCTGATAGACATGATA+AGG | - | chr8_1:57887353-57887372 | Msa1203560:CDS | 40.0% | |
| !! | AATTAGCCTTGATGCGGATA+TGG | - | chr8_1:57887402-57887421 | Msa1203560:CDS | 40.0% |
| GAAAACTTGTCAGTTGTGAC+TGG | + | chr8_1:57887711-57887730 | None:intergenic | 40.0% | |
| ! | ACTCTTGGGTTCGGCATTTT+CGG | + | chr8_1:57883768-57883787 | None:intergenic | 45.0% |
| TCGAAGTACACTCTTGGGTT+CGG | + | chr8_1:57883777-57883796 | None:intergenic | 45.0% | |
| !! | TACTTCGACATAAGCATCGG+CGG | - | chr8_1:57883789-57883808 | Msa1203560:three_prime_UTR | 45.0% |
| ! | CGGAAATTTTCGGCGGTTTT+GGG | + | chr8_1:57883861-57883880 | None:intergenic | 45.0% |
| ! | TCGGAAATTTTCGGCGGTTT+TGG | + | chr8_1:57883862-57883881 | None:intergenic | 45.0% |
| ! | GAGAGATCGGAAATTTTCGG+CGG | + | chr8_1:57883868-57883887 | None:intergenic | 45.0% |
| AATTTCCGATCTCTCTGCAC+CGG | - | chr8_1:57883873-57883892 | Msa1203560:three_prime_UTR | 45.0% | |
| TCATGAAGCCTTTGACGACA+CGG | + | chr8_1:57883959-57883978 | None:intergenic | 45.0% | |
| GTCAAAGGCTTCATGATCCA+AGG | - | chr8_1:57883963-57883982 | Msa1203560:three_prime_UTR | 45.0% | |
| AAAGGCTTCATGATCCAAGG+CGG | - | chr8_1:57883966-57883985 | Msa1203560:three_prime_UTR | 45.0% | |
| GACCTAAAACACGAACGGAA+AGG | - | chr8_1:57884059-57884078 | Msa1203560:CDS | 45.0% | |
| ! | TCCCTTTCCGTTCGTGTTTT+AGG | + | chr8_1:57884064-57884083 | None:intergenic | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+CGG | + | chr8_1:57884110-57884129 | None:intergenic | 45.0% |
| ACATGCTTCCCATCCAAATG+CGG | + | chr8_1:57884155-57884174 | None:intergenic | 45.0% | |
| ! | ATGGGAAGCATGTGGTGTTT+GGG | - | chr8_1:57884162-57884181 | Msa1203560:intron | 45.0% |
| GTGTTTGGGAAGGTTGTGAA+AGG | - | chr8_1:57884176-57884195 | Msa1203560:intron | 45.0% | |
| GTTGTTAGGTCTGTTGAGCT+TGG | - | chr8_1:57884206-57884225 | Msa1203560:CDS | 45.0% | |
| ATTGTGGGGAGATTGCTGAA+GGG | - | chr8_1:57884276-57884295 | Msa1203560:intron | 45.0% | |
| ! | GGCTTGGTATCAAGATCAAC+AGG | + | chr8_1:57884356-57884375 | None:intergenic | 45.0% |
| TGCGCTATTTGGACATGTGT+TGG | - | chr8_1:57884830-57884849 | Msa1203560:intron | 45.0% | |
| GCGCTATTTGGACATGTGTT+GGG | - | chr8_1:57884831-57884850 | Msa1203560:intron | 45.0% | |
| TTTGGACATGTGTTGGGAGA+AGG | - | chr8_1:57884837-57884856 | Msa1203560:intron | 45.0% | |
| AAACTAACGAGAACCGACCT+TGG | + | chr8_1:57884873-57884892 | None:intergenic | 45.0% | |
| !!! | TCTGTTTTTGGTTGTTGCCG+TGG | - | chr8_1:57884914-57884933 | Msa1203560:CDS | 45.0% |
| !! | CAGAGAAGAGCACTGCTTTA+AGG | - | chr8_1:57884994-57885013 | Msa1203560:intron | 45.0% |
| ACCCAAATTGCACACGTGAT+TGG | - | chr8_1:57885377-57885396 | Msa1203560:intron | 45.0% | |
| GCCAATCACGTGTGCAATTT+GGG | + | chr8_1:57885381-57885400 | None:intergenic | 45.0% | |
| AGCCAATCACGTGTGCAATT+TGG | + | chr8_1:57885382-57885401 | None:intergenic | 45.0% | |
| CTCTTAGGGCCAAACTAACA+AGG | - | chr8_1:57885524-57885543 | Msa1203560:intron | 45.0% | |
| TAGGGCCAAACTAACAAGGT+TGG | - | chr8_1:57885528-57885547 | Msa1203560:intron | 45.0% | |
| ! | GCCAAACTAACAAGGTTGGT+GGG | - | chr8_1:57885532-57885551 | Msa1203560:intron | 45.0% |
| !! | CCAAACTAACAAGGTTGGTG+GGG | - | chr8_1:57885533-57885552 | Msa1203560:intron | 45.0% |
| !! | CAAACTAACAAGGTTGGTGG+GGG | - | chr8_1:57885534-57885553 | Msa1203560:intron | 45.0% |
| GAAGCAGACCTACTCAGAAA+AGG | + | chr8_1:57885604-57885623 | None:intergenic | 45.0% | |
| GCAAAAGCTCTGTTTCGCAA+AGG | - | chr8_1:57885832-57885851 | Msa1203560:intron | 45.0% | |
| GGGTAAAACCCTATCCATCT+TGG | - | chr8_1:57886118-57886137 | Msa1203560:intron | 45.0% | |
| GGGGGTTCTGTAAGAAAAAG+GGG | + | chr8_1:57886377-57886396 | None:intergenic | 45.0% | |
| CTGGGGGTTCTGTAAGAAAA+AGG | + | chr8_1:57886379-57886398 | None:intergenic | 45.0% | |
| TTATCAATTCCCTGGTCTGG+GGG | + | chr8_1:57886395-57886414 | None:intergenic | 45.0% | |
| GTTATCAATTCCCTGGTCTG+GGG | + | chr8_1:57886396-57886415 | None:intergenic | 45.0% | |
| TCTCTTGAAGCTATCCAGAG+CGG | + | chr8_1:57886555-57886574 | None:intergenic | 45.0% | |
| AGTTGGAGCCAAATGATGGT+TGG | - | chr8_1:57886582-57886601 | Msa1203560:intron | 45.0% | |
| TTATAACACTGGGGTCCTGA+GGG | - | chr8_1:57886698-57886717 | Msa1203560:intron | 45.0% | |
| TGAATAGACTCCTTCAACCC+TGG | + | chr8_1:57886812-57886831 | None:intergenic | 45.0% | |
| ! | GAGGATTTGTTTAGCCGAAC+AGG | + | chr8_1:57886947-57886966 | None:intergenic | 45.0% |
| ! | GTGGAAATGATGTGACTTGG+AGG | + | chr8_1:57886966-57886985 | None:intergenic | 45.0% |
| CATACCTTGCTCTGTTCTTC+AGG | - | chr8_1:57887198-57887217 | Msa1203560:CDS | 45.0% | |
| CATACACCATATCCGCATCA+AGG | + | chr8_1:57887411-57887430 | None:intergenic | 45.0% | |
| TGATGCGGATATGGTGTATG+TGG | - | chr8_1:57887411-57887430 | Msa1203560:CDS | 45.0% | |
| ! | GTTCGGCATTTTCGGAAGAG+AGG | + | chr8_1:57883760-57883779 | None:intergenic | 50.0% |
| CTTGAAATGGAGAGGGACGT+TGG | + | chr8_1:57883922-57883941 | None:intergenic | 50.0% | |
| TTTGACGACACGGTGGAAGA+TGG | + | chr8_1:57883949-57883968 | None:intergenic | 50.0% | |
| ATCTTCCACCGTGTCGTCAA+AGG | - | chr8_1:57883948-57883967 | Msa1203560:three_prime_UTR | 50.0% | |
| AATACCGGTCCGAACACCAA+TGG | - | chr8_1:57884098-57884117 | Msa1203560:intron | 50.0% | |
| ATACCGGTCCGAACACCAAT+GGG | - | chr8_1:57884099-57884118 | Msa1203560:intron | 50.0% | |
| ! | GCATTTGGATGGGAAGCATG+TGG | - | chr8_1:57884154-57884173 | Msa1203560:intron | 50.0% |
| ! | GATGGGAAGCATGTGGTGTT+TGG | - | chr8_1:57884161-57884180 | Msa1203560:intron | 50.0% |
| GAAGCATGTGGTGTTTGGGA+AGG | - | chr8_1:57884166-57884185 | Msa1203560:intron | 50.0% | |
| GGGAAGGTTGTGAAAGGGAT+TGG | - | chr8_1:57884182-57884201 | Msa1203560:intron | 50.0% | |
| TAGGTCTGTTGAGCTTGGTC+CGG | - | chr8_1:57884211-57884230 | Msa1203560:CDS | 50.0% | |
| GCAATCACAACATCCTGCTC+CGG | + | chr8_1:57884254-57884273 | None:intergenic | 50.0% | |
| GATTGTGGGGAGATTGCTGA+AGG | - | chr8_1:57884275-57884294 | Msa1203560:intron | 50.0% | |
| TTGTGGGGAGATTGCTGAAG+GGG | - | chr8_1:57884277-57884296 | Msa1203560:intron | 50.0% | |
| ATTGCTGAAGGGGAGGATGA+AGG | - | chr8_1:57884287-57884306 | Msa1203560:intron | 50.0% | |
| TTGCTGAAGGGGAGGATGAA+GGG | - | chr8_1:57884288-57884307 | Msa1203560:intron | 50.0% | |
| TGATCTTGATACCAAGCCGG+AGG | - | chr8_1:57884358-57884377 | Msa1203560:intron | 50.0% | |
| ATCCACCATTCAAGCTCCTC+CGG | + | chr8_1:57884377-57884396 | None:intergenic | 50.0% | |
| TCGCAAGGCTTTGCGCTATT+TGG | - | chr8_1:57884819-57884838 | Msa1203560:intron | 50.0% | |
| GACATGTGTTGGGAGAAGGA+TGG | - | chr8_1:57884841-57884860 | Msa1203560:intron | 50.0% | |
| !! | GAGAAGGATGGTGTTGACCA+AGG | - | chr8_1:57884853-57884872 | Msa1203560:intron | 50.0% |
| !! | AGGATGGTGTTGACCAAGGT+CGG | - | chr8_1:57884857-57884876 | Msa1203560:intron | 50.0% |
| ! | TGTCCTGTGCCTGTTTTCTC+CGG | - | chr8_1:57885438-57885457 | Msa1203560:intron | 50.0% |
| GGCCAAACTAACAAGGTTGG+TGG | - | chr8_1:57885531-57885550 | Msa1203560:intron | 50.0% | |
| CCCCACCAACCTTGTTAGTT+TGG | + | chr8_1:57885536-57885555 | None:intergenic | 50.0% | |
| ! | CTCACTGCCCTTTTCTGAGT+AGG | - | chr8_1:57885593-57885612 | Msa1203560:intron | 50.0% |
| TCGGACTTTGCAATGCACGA+TGG | - | chr8_1:57885802-57885821 | Msa1203560:intron | 50.0% | |
| CTTATAACACTGGGGTCCTG+AGG | - | chr8_1:57886697-57886716 | Msa1203560:intron | 50.0% | |
| ! | CTTTGGCTTACCAGGGTTGA+AGG | - | chr8_1:57886799-57886818 | Msa1203560:intron | 50.0% |
| ACCTTGCTCTGTTCTTCAGG+AGG | - | chr8_1:57887201-57887220 | Msa1203560:CDS | 50.0% | |
| CCTTGCTCTGTTCTTCAGGA+GGG | - | chr8_1:57887202-57887221 | Msa1203560:CDS | 50.0% | |
| GTACGCAATTGCCAGGAAGA+AGG | - | chr8_1:57887236-57887255 | Msa1203560:CDS | 50.0% | |
| GGATATGGTGTATGTGGCGA+TGG | - | chr8_1:57887417-57887436 | Msa1203560:CDS | 50.0% | |
| !!! | GGCGGTTTTGGGAACGACAT+CGG | + | chr8_1:57883850-57883869 | None:intergenic | 55.0% |
| TTTCGCCGGTGCAGAGAGAT+CGG | + | chr8_1:57883881-57883900 | None:intergenic | 55.0% | |
| ! | TCTCTCTGCACCGGCGAAAA+AGG | - | chr8_1:57883882-57883901 | Msa1203560:three_prime_UTR | 55.0% |
| ! | TGCACCGGCGAAAAAGGCAT+CGG | - | chr8_1:57883888-57883907 | Msa1203560:three_prime_UTR | 55.0% |
| !! | TGGACCGATGCCTTTTTCGC+CGG | + | chr8_1:57883895-57883914 | None:intergenic | 55.0% |
| TGAAGCCTTTGACGACACGG+TGG | + | chr8_1:57883956-57883975 | None:intergenic | 55.0% | |
| ! | ACTCCCATTGGTGTTCGGAC+CGG | + | chr8_1:57884105-57884124 | None:intergenic | 55.0% |
| TCTGTTGAGCTTGGTCCGGT+TGG | - | chr8_1:57884215-57884234 | Msa1203560:CDS | 55.0% | |
| CTGTTGAGCTTGGTCCGGTT+GGG | - | chr8_1:57884216-57884235 | Msa1203560:CDS | 55.0% | |
| TGTTGAGCTTGGTCCGGTTG+GGG | - | chr8_1:57884217-57884236 | Msa1203560:CDS | 55.0% | |
| GGTCGATCATTCTCCCCAAC+CGG | + | chr8_1:57884233-57884252 | None:intergenic | 55.0% | |
| GGTTGGGGAGAATGATCGAC+CGG | - | chr8_1:57884232-57884251 | Msa1203560:intron | 55.0% | |
| TGCTGAAGGGGAGGATGAAG+GGG | - | chr8_1:57884289-57884308 | Msa1203560:intron | 55.0% | |
| TTCACAAGGTGGTAGGCCAC+CGG | + | chr8_1:57885460-57885479 | None:intergenic | 55.0% | |
| AGCTCTGTTTCGCAAAGGCC+AGG | - | chr8_1:57885837-57885856 | Msa1203560:intron | 55.0% | |
| CTGTTTCGCAAAGGCCAGGT+TGG | - | chr8_1:57885841-57885860 | Msa1203560:intron | 55.0% | |
| TCTTACAGAACCCCCAGACC+AGG | - | chr8_1:57886382-57886401 | Msa1203560:intron | 55.0% | |
| CTTACAGAACCCCCAGACCA+GGG | - | chr8_1:57886383-57886402 | Msa1203560:intron | 55.0% | |
| ACTCAACAACAGCCTCCCTC+AGG | + | chr8_1:57886716-57886735 | None:intergenic | 55.0% | |
| CCCTCCTGAAGAACAGAGCA+AGG | + | chr8_1:57887205-57887224 | None:intergenic | 55.0% | |
| !! | AAGCATCGGCGGTGAACTCG+AGG | - | chr8_1:57883800-57883819 | Msa1203560:three_prime_UTR | 60.0% |
| !! | AGCATCGGCGGTGAACTCGA+GGG | - | chr8_1:57883801-57883820 | Msa1203560:three_prime_UTR | 60.0% |
| TGGAGAGGGACGTTGGTGTG+TGG | + | chr8_1:57883915-57883934 | None:intergenic | 60.0% | |
| ACCGGCGGCGAGTCAATCTA+CGG | - | chr8_1:57884011-57884030 | Msa1203560:three_prime_UTR | 60.0% | |
| !! | ACCGTAGATTGACTCGCCGC+CGG | + | chr8_1:57884015-57884034 | None:intergenic | 60.0% |
| GTTCGGACCGGTATTCGCCA+TGG | + | chr8_1:57884093-57884112 | None:intergenic | 60.0% | |
| ACGAGGACGCCGCATTTGGA+TGG | - | chr8_1:57884143-57884162 | Msa1203560:intron | 60.0% | |
| CGAGGACGCCGCATTTGGAT+GGG | - | chr8_1:57884144-57884163 | Msa1203560:intron | 60.0% | |
| GGAGAATGATCGACCGGAGC+AGG | - | chr8_1:57884238-57884257 | Msa1203560:intron | 60.0% | |
| TGGGGAGATTGCTGAAGGGG+AGG | - | chr8_1:57884280-57884299 | Msa1203560:intron | 60.0% | |
| CCATTCAAGCTCCTCCGGCT+TGG | + | chr8_1:57884372-57884391 | None:intergenic | 60.0% | |
| CCAAGCCGGAGGAGCTTGAA+TGG | - | chr8_1:57884369-57884388 | Msa1203560:intron | 60.0% | |
| AGCCGGAGGAGCTTGAATGG+TGG | - | chr8_1:57884372-57884391 | Msa1203560:intron | 60.0% | |
| CCACCGGAGAAAACAGGCAC+AGG | + | chr8_1:57885444-57885463 | None:intergenic | 60.0% | |
| ! | CCTGTGCCTGTTTTCTCCGG+TGG | - | chr8_1:57885441-57885460 | Msa1203560:intron | 60.0% |
| GGTAGGCCACCGGAGAAAAC+AGG | + | chr8_1:57885450-57885469 | None:intergenic | 60.0% | |
| CAATGACCTGGATGCCGCTC+TGG | - | chr8_1:57886538-57886557 | Msa1203560:intron | 60.0% | |
| AGCTATCCAGAGCGGCATCC+AGG | + | chr8_1:57886547-57886566 | None:intergenic | 60.0% | |
| TAACACTGGGGTCCTGAGGG+AGG | - | chr8_1:57886701-57886720 | Msa1203560:intron | 60.0% | |
| AGGCGGAGATGTCACCGCCT+TGG | + | chr8_1:57883983-57884002 | None:intergenic | 65.0% | |
| GGTGACATCTCCGCCTCCGA+CGG | - | chr8_1:57883987-57884006 | Msa1203560:three_prime_UTR | 65.0% | |
| ATCTCCGCCTCCGACGGAAC+CGG | - | chr8_1:57883993-57884012 | Msa1203560:three_prime_UTR | 65.0% | |
| GACGACGAGGACGCCGCATT+TGG | - | chr8_1:57884139-57884158 | Msa1203560:intron | 65.0% | |
| !! | TGACTCGCCGCCGGTTCCGT+CGG | + | chr8_1:57884006-57884025 | None:intergenic | 70.0% |
| TCCGCCTCCGACGGAACCGG+CGG | - | chr8_1:57883996-57884015 | Msa1203560:three_prime_UTR | 75.0% | |
| !!! | GCCGCCGGTTCCGTCGGAGG+CGG | + | chr8_1:57884000-57884019 | None:intergenic | 80.0% |
| !!! | CTCGCCGCCGGTTCCGTCGG+AGG | + | chr8_1:57884003-57884022 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 57883718 | 57887739 | 57883718 | ID=Msa1203560;Name=Msa1203560 |
| chr8_1 | mRNA | 57883718 | 57887739 | 57883718 | ID=Msa1203560-mRNA-1;Parent=Msa1203560;Name=Msa1203560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=53|1|1|1|1|1|7|332|360 |
| chr8_1 | exon | 57883718 | 57884103 | 57883718 | ID=Msa1203560-mRNA-1:exon:18910;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57884200 | 57884237 | 57884200 | ID=Msa1203560-mRNA-1:exon:18909;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57884858 | 57884933 | 57884858 | ID=Msa1203560-mRNA-1:exon:18908;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57885599 | 57885700 | 57885599 | ID=Msa1203560-mRNA-1:exon:18907;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57886408 | 57886460 | 57886408 | ID=Msa1203560-mRNA-1:exon:18906;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57886583 | 57886670 | 57886583 | ID=Msa1203560-mRNA-1:exon:18905;Parent=Msa1203560-mRNA-1 |
| chr8_1 | exon | 57887015 | 57887739 | 57887015 | ID=Msa1203560-mRNA-1:exon:18904;Parent=Msa1203560-mRNA-1 |
| chr8_1 | five_prime_UTR | 57887687 | 57887739 | 57887687 | ID=Msa1203560-mRNA-1:five_prime_utr;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57887015 | 57887686 | 57887015 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57886583 | 57886670 | 57886583 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57886408 | 57886460 | 57886408 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57885599 | 57885700 | 57885599 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57884858 | 57884933 | 57884858 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57884200 | 57884237 | 57884200 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | CDS | 57884050 | 57884103 | 57884050 | ID=Msa1203560-mRNA-1:cds;Parent=Msa1203560-mRNA-1 |
| chr8_1 | three_prime_UTR | 57883718 | 57884049 | 57883718 | ID=Msa1203560-mRNA-1:three_prime_utr;Parent=Msa1203560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
