Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490730 | AES68671.1 | 97.802 | 91 | 2 | 0 | 1 | 91 | 50 | 140 | 1.42e-56 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490730 | G7IVT7 | 97.802 | 91 | 2 | 0 | 1 | 91 | 50 | 140 | 6.77e-57 | 181 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0490730 | -0.804478 | 2.118941e-49 | -8.615850e-47 |
| Msa0006110 | Msa0490730 | -0.838103 | 3.507782e-57 | -8.615850e-47 |
| Msa0010890 | Msa0490730 | -0.801556 | 8.517045e-49 | -8.615850e-47 |
| Msa0012530 | Msa0490730 | -0.803900 | 2.795353e-49 | -8.615850e-47 |
| Msa0017510 | Msa0490730 | -0.824404 | 8.220665e-54 | -8.615850e-47 |
| Msa0036920 | Msa0490730 | -0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0045790 | Msa0490730 | -0.807180 | 5.733800e-50 | -8.615850e-47 |
| Msa0046160 | Msa0490730 | -0.807748 | 4.344516e-50 | -8.615850e-47 |
| Msa0050390 | Msa0490730 | -0.803922 | 2.766271e-49 | -8.615850e-47 |
| Msa0055740 | Msa0490730 | -0.812661 | 3.789937e-51 | -8.615850e-47 |
| Msa0061380 | Msa0490730 | -0.815826 | 7.574983e-52 | -8.615850e-47 |
| Msa0078900 | Msa0490730 | -0.800543 | 1.371806e-48 | -8.615850e-47 |
| Msa0079400 | Msa0490730 | -0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0091210 | Msa0490730 | 0.817987 | 2.479306e-52 | -8.615850e-47 |
| Msa0101810 | Msa0490730 | 0.833796 | 4.341410e-56 | -8.615850e-47 |
| Msa0133980 | Msa0490730 | 0.828265 | 9.894172e-55 | -8.615850e-47 |
| Msa0139060 | Msa0490730 | -0.805488 | 1.303288e-49 | -8.615850e-47 |
| Msa0140500 | Msa0490730 | 0.804924 | 1.710204e-49 | -8.615850e-47 |
| Msa0152430 | Msa0490730 | -0.818971 | 1.483774e-52 | -8.615850e-47 |
| Msa0157290 | Msa0490730 | -0.825364 | 4.879823e-54 | -8.615850e-47 |
| Msa0169220 | Msa0490730 | -0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0169860 | Msa0490730 | -0.801236 | 9.902188e-49 | -8.615850e-47 |
| Msa0171300 | Msa0490730 | -0.836194 | 1.079610e-56 | -8.615850e-47 |
| Msa0171540 | Msa0490730 | -0.817174 | 3.780943e-52 | -8.615850e-47 |
| Msa0195000 | Msa0490730 | -0.802932 | 4.437481e-49 | -8.615850e-47 |
| Msa0197660 | Msa0490730 | -0.809469 | 1.862973e-50 | -8.615850e-47 |
| Msa0212310 | Msa0490730 | -0.803265 | 3.786296e-49 | -8.615850e-47 |
| Msa0212990 | Msa0490730 | -0.824582 | 7.467271e-54 | -8.615850e-47 |
| Msa0215320 | Msa0490730 | 0.838087 | 3.541982e-57 | -8.615850e-47 |
| Msa0220290 | Msa0490730 | 0.817846 | 2.668040e-52 | -8.615850e-47 |
| Msa0220740 | Msa0490730 | -0.841146 | 5.672281e-58 | -8.615850e-47 |
| Msa0223410 | Msa0490730 | 0.833881 | 4.132499e-56 | -8.615850e-47 |
| Msa0224780 | Msa0490730 | -0.814640 | 1.390018e-51 | -8.615850e-47 |
| Msa0237070 | Msa0490730 | -0.805027 | 1.627249e-49 | -8.615850e-47 |
| Msa0237310 | Msa0490730 | -0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0367870 | Msa0490730 | -0.811613 | 6.413159e-51 | -8.615850e-47 |
| Msa0376590 | Msa0490730 | -0.815148 | 1.072623e-51 | -8.615850e-47 |
| Msa0381610 | Msa0490730 | 0.802221 | 6.217541e-49 | -8.615850e-47 |
| Msa0386740 | Msa0490730 | -0.802792 | 4.741989e-49 | -8.615850e-47 |
| Msa0388960 | Msa0490730 | -0.856166 | 3.865197e-62 | -8.615850e-47 |
| Msa0390400 | Msa0490730 | 0.827996 | 1.148965e-54 | -8.615850e-47 |
| Msa0393080 | Msa0490730 | -0.814937 | 1.194665e-51 | -8.615850e-47 |
| Msa0395770 | Msa0490730 | 0.949817 | 5.892590e-108 | -8.615850e-47 |
| Msa0395790 | Msa0490730 | -0.817125 | 3.878797e-52 | -8.615850e-47 |
| Msa0405880 | Msa0490730 | -0.802250 | 6.132771e-49 | -8.615850e-47 |
| Msa0410650 | Msa0490730 | -0.819758 | 9.816979e-53 | -8.615850e-47 |
| Msa0433410 | Msa0490730 | 0.801644 | 8.168316e-49 | -8.615850e-47 |
| Msa0437830 | Msa0490730 | 0.803317 | 3.693276e-49 | -8.615850e-47 |
| Msa0439970 | Msa0490730 | -0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0440750 | Msa0490730 | -0.823354 | 1.449341e-53 | -8.615850e-47 |
| Msa0443260 | Msa0490730 | -0.803190 | 3.923745e-49 | -8.615850e-47 |
| Msa0458090 | Msa0490730 | -0.808093 | 3.668665e-50 | -8.615850e-47 |
| Msa0458440 | Msa0490730 | -0.815756 | 7.852116e-52 | -8.615850e-47 |
| Msa0464260 | Msa0490730 | -0.812807 | 3.521061e-51 | -8.615850e-47 |
| Msa0465940 | Msa0490730 | -0.801629 | 8.229084e-49 | -8.615850e-47 |
| Msa0466390 | Msa0490730 | -0.829015 | 6.520197e-55 | -8.615850e-47 |
| Msa0469160 | Msa0490730 | -0.807665 | 4.524252e-50 | -8.615850e-47 |
| Msa0469940 | Msa0490730 | 0.843580 | 1.283600e-58 | -8.615850e-47 |
| Msa0239800 | Msa0490730 | -0.801877 | 7.319463e-49 | -8.615850e-47 |
| Msa0259500 | Msa0490730 | -0.802294 | 6.007054e-49 | -8.615850e-47 |
| Msa0261340 | Msa0490730 | -0.827233 | 1.752070e-54 | -8.615850e-47 |
| Msa0267370 | Msa0490730 | -0.802702 | 4.948469e-49 | -8.615850e-47 |
| Msa0274730 | Msa0490730 | -0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa0283450 | Msa0490730 | -0.815568 | 8.649234e-52 | -8.615850e-47 |
| Msa0284520 | Msa0490730 | -0.819036 | 1.433784e-52 | -8.615850e-47 |
| Msa0285450 | Msa0490730 | -0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa0292170 | Msa0490730 | -0.801460 | 8.908985e-49 | -8.615850e-47 |
| Msa0306210 | Msa0490730 | 0.817616 | 3.007418e-52 | -8.615850e-47 |
| Msa0315530 | Msa0490730 | -0.805066 | 1.596935e-49 | -8.615850e-47 |
| Msa0317510 | Msa0490730 | -0.810625 | 1.050215e-50 | -8.615850e-47 |
| Msa0317730 | Msa0490730 | -0.815139 | 1.077092e-51 | -8.615850e-47 |
| Msa0317740 | Msa0490730 | -0.827167 | 1.816509e-54 | -8.615850e-47 |
| Msa0330340 | Msa0490730 | -0.815988 | 6.970238e-52 | -8.615850e-47 |
| Msa0332000 | Msa0490730 | -0.807266 | 5.496760e-50 | -8.615850e-47 |
| Msa0336040 | Msa0490730 | 0.839116 | 1.920957e-57 | -8.615850e-47 |
| Msa0338110 | Msa0490730 | -0.815057 | 1.123330e-51 | -8.615850e-47 |
| Msa0340450 | Msa0490730 | -0.829691 | 4.467997e-55 | -8.615850e-47 |
| Msa0344690 | Msa0490730 | 0.839393 | 1.627956e-57 | -8.615850e-47 |
| Msa0345970 | Msa0490730 | -0.807435 | 5.061198e-50 | -8.615850e-47 |
| Msa0350870 | Msa0490730 | -0.815701 | 8.077599e-52 | -8.615850e-47 |
| Msa0488560 | Msa0490730 | -0.807787 | 4.260934e-50 | -8.615850e-47 |
| Msa0490730 | Msa0507680 | -0.802866 | 4.577907e-49 | -8.615850e-47 |
| Msa0490730 | Msa0530400 | -0.837279 | 5.709628e-57 | -8.615850e-47 |
| Msa0490730 | Msa0545210 | -0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0490730 | Msa0555020 | -0.808376 | 3.193201e-50 | -8.615850e-47 |
| Msa0490730 | Msa0559500 | -0.831951 | 1.247545e-55 | -8.615850e-47 |
| Msa0490730 | Msa0567020 | -0.812808 | 3.518409e-51 | -8.615850e-47 |
| Msa0490730 | Msa0572480 | -0.803972 | 2.701003e-49 | -8.615850e-47 |
| Msa0490730 | Msa0574890 | -0.808346 | 3.240953e-50 | -8.615850e-47 |
| Msa0490730 | Msa0581050 | -0.813078 | 3.070245e-51 | -8.615850e-47 |
| Msa0490730 | Msa0598160 | -0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0490730 | Msa0600700 | -0.805739 | 1.154038e-49 | -8.615850e-47 |
| Msa0490730 | Msa0602240 | -0.831061 | 2.066462e-55 | -8.615850e-47 |
| Msa0490730 | Msa0602250 | -0.833758 | 4.437931e-56 | -8.615850e-47 |
| Msa0490730 | Msa0608620 | -0.801100 | 1.055750e-48 | -8.615850e-47 |
| Msa0490730 | Msa0613440 | -0.807531 | 4.830927e-50 | -8.615850e-47 |
| Msa0490730 | Msa0613710 | -0.824963 | 6.070009e-54 | -8.615850e-47 |
| Msa0490730 | Msa0625190 | -0.834983 | 2.185601e-56 | -8.615850e-47 |
| Msa0490730 | Msa0626280 | -0.837317 | 5.581613e-57 | -8.615850e-47 |
| Msa0490730 | Msa0626360 | -0.803779 | 2.961629e-49 | -8.615850e-47 |
| Msa0490730 | Msa0626410 | -0.862722 | 4.144518e-64 | -8.615850e-47 |
| Msa0490730 | Msa0629450 | -0.805882 | 1.077128e-49 | -8.615850e-47 |
| Msa0490730 | Msa0657610 | -0.820828 | 5.579377e-53 | -8.615850e-47 |
| Msa0490730 | Msa0658570 | -0.841958 | 3.464101e-58 | -8.615850e-47 |
| Msa0490730 | Msa0661650 | -0.808603 | 2.856178e-50 | -8.615850e-47 |
| Msa0490730 | Msa0663380 | -0.801076 | 1.067960e-48 | -8.615850e-47 |
| Msa0490730 | Msa0665170 | -0.803795 | 2.939302e-49 | -8.615850e-47 |
| Msa0490730 | Msa0669320 | -0.802493 | 5.466361e-49 | -8.615850e-47 |
| Msa0490730 | Msa0679290 | 0.870593 | 1.297582e-66 | -8.615850e-47 |
| Msa0490730 | Msa0682550 | -0.800693 | 1.278511e-48 | -8.615850e-47 |
| Msa0490730 | Msa0691050 | -0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0490730 | Msa0703490 | -0.810289 | 1.241072e-50 | -8.615850e-47 |
| Msa0490730 | Msa0724210 | -0.804141 | 2.490533e-49 | -8.615850e-47 |
| Msa0490730 | Msa0731940 | -0.808042 | 3.760963e-50 | -8.615850e-47 |
| Msa0490730 | Msa0732840 | -0.806871 | 6.665014e-50 | -8.615850e-47 |
| Msa0490730 | Msa0733390 | -0.803655 | 3.143150e-49 | -8.615850e-47 |
| Msa0490730 | Msa0735170 | -0.808071 | 3.709163e-50 | -8.615850e-47 |
| Msa0490730 | Msa0737570 | -0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0490730 | Msa0756460 | -0.824366 | 8.394382e-54 | -8.615850e-47 |
| Msa0490730 | Msa0756630 | 0.804060 | 2.589366e-49 | -8.615850e-47 |
| Msa0490730 | Msa0760130 | -0.820169 | 7.907278e-53 | -8.615850e-47 |
| Msa0490730 | Msa0762970 | -0.803471 | 3.430817e-49 | -8.615850e-47 |
| Msa0490730 | Msa0767300 | -0.808303 | 3.309200e-50 | -8.615850e-47 |
| Msa0490730 | Msa0802470 | 0.842555 | 2.407054e-58 | -8.615850e-47 |
| Msa0490730 | Msa0804730 | -0.814444 | 1.535601e-51 | -8.615850e-47 |
| Msa0490730 | Msa0810220 | -0.800110 | 1.680853e-48 | -8.615850e-47 |
| Msa0490730 | Msa0833520 | -0.809687 | 1.672838e-50 | -8.615850e-47 |
| Msa0490730 | Msa0835800 | -0.844643 | 6.656205e-59 | -8.615850e-47 |
| Msa0490730 | Msa0838580 | -0.815976 | 7.015436e-52 | -8.615850e-47 |
| Msa0490730 | Msa0842650 | -0.803823 | 2.900383e-49 | -8.615850e-47 |
| Msa0490730 | Msa0843780 | 0.808204 | 3.474792e-50 | -8.615850e-47 |
| Msa0490730 | Msa0844240 | -0.802851 | 4.610064e-49 | -8.615850e-47 |
| Msa0490730 | Msa0844490 | -0.809777 | 1.599842e-50 | -8.615850e-47 |
| Msa0490730 | Msa0844570 | -0.800614 | 1.326880e-48 | -8.615850e-47 |
| Msa0490730 | Msa0870530 | -0.804846 | 1.775886e-49 | -8.615850e-47 |
| Msa0490730 | Msa0875290 | -0.814718 | 1.335560e-51 | -8.615850e-47 |
| Msa0490730 | Msa0880140 | -0.822149 | 2.765032e-53 | -8.615850e-47 |
| Msa0490730 | Msa0886330 | 0.826811 | 2.210396e-54 | -8.615850e-47 |
| Msa0490730 | Msa0896750 | -0.824621 | 7.308112e-54 | -8.615850e-47 |
| Msa0490730 | Msa0908050 | -0.803220 | 3.867461e-49 | -8.615850e-47 |
| Msa0490730 | Msa0909120 | -0.815242 | 1.022150e-51 | -8.615850e-47 |
| Msa0490730 | Msa0922410 | -0.807692 | 4.464115e-50 | -8.615850e-47 |
| Msa0490730 | Msa0926890 | -0.845682 | 3.487914e-59 | -8.615850e-47 |
| Msa0490730 | Msa0926900 | -0.810633 | 1.046271e-50 | -8.615850e-47 |
| Msa0490730 | Msa0936220 | -0.805225 | 1.479089e-49 | -8.615850e-47 |
| Msa0490730 | Msa0936300 | -0.800864 | 1.180136e-48 | -8.615850e-47 |
| Msa0490730 | Msa0942200 | -0.821142 | 4.725778e-53 | -8.615850e-47 |
| Msa0490730 | Msa0965610 | -0.809427 | 1.902074e-50 | -8.615850e-47 |
| Msa0490730 | Msa0969520 | -0.822636 | 2.131105e-53 | -8.615850e-47 |
| Msa0490730 | Msa0974080 | -0.832084 | 1.156305e-55 | -8.615850e-47 |
| Msa0490730 | Msa1014540 | -0.818298 | 2.108623e-52 | -8.615850e-47 |
| Msa0490730 | Msa1017430 | -0.803439 | 3.484151e-49 | -8.615850e-47 |
| Msa0490730 | Msa1019150 | -0.812799 | 3.534503e-51 | -8.615850e-47 |
| Msa0490730 | Msa1022820 | -0.801021 | 1.095908e-48 | -8.615850e-47 |
| Msa0490730 | Msa1030970 | -0.817501 | 3.191796e-52 | -8.615850e-47 |
| Msa0490730 | Msa1036710 | 0.803801 | 2.931664e-49 | -8.615850e-47 |
| Msa0490730 | Msa1039710 | 0.803186 | 3.931222e-49 | -8.615850e-47 |
| Msa0490730 | Msa1061060 | 0.804919 | 1.714558e-49 | -8.615850e-47 |
| Msa0490730 | Msa1068200 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa0490730 | Msa1070010 | -0.800657 | 1.300697e-48 | -8.615850e-47 |
| Msa0490730 | Msa1075220 | 0.839053 | 1.994499e-57 | -8.615850e-47 |
| Msa0490730 | Msa1075540 | -0.805714 | 1.168319e-49 | -8.615850e-47 |
| Msa0490730 | Msa1075650 | -0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0490730 | Msa1082500 | -0.806115 | 9.620054e-50 | -8.615850e-47 |
| Msa0490730 | Msa1085200 | -0.814182 | 1.754728e-51 | -8.615850e-47 |
| Msa0490730 | Msa1085300 | -0.814842 | 1.253622e-51 | -8.615850e-47 |
| Msa0490730 | Msa1089940 | -0.803164 | 3.972245e-49 | -8.615850e-47 |
| Msa0490730 | Msa1090260 | -0.809089 | 2.247667e-50 | -8.615850e-47 |
| Msa0490730 | Msa1101720 | -0.806981 | 6.317643e-50 | -8.615850e-47 |
| Msa0490730 | Msa1101760 | -0.800413 | 1.457883e-48 | -8.615850e-47 |
| Msa0490730 | Msa1113170 | -0.806857 | 6.710282e-50 | -8.615850e-47 |
| Msa0490730 | Msa1116130 | 0.812284 | 4.580320e-51 | -8.615850e-47 |
| Msa0490730 | Msa1121480 | -0.802429 | 5.632845e-49 | -8.615850e-47 |
| Msa0490730 | Msa1121490 | -0.839437 | 1.585264e-57 | -8.615850e-47 |
| Msa0490730 | Msa1131050 | -0.814651 | 1.382343e-51 | -8.615850e-47 |
| Msa0490730 | Msa1137570 | -0.843714 | 1.182348e-58 | -8.615850e-47 |
| Msa0490730 | Msa1139000 | 0.824150 | 9.435164e-54 | -8.615850e-47 |
| Msa0490730 | Msa1139890 | -0.811173 | 7.990578e-51 | -8.615850e-47 |
| Msa0490730 | Msa1144720 | 0.825446 | 4.668191e-54 | -8.615850e-47 |
| Msa0490730 | Msa1144750 | -0.827480 | 1.528418e-54 | -8.615850e-47 |
| Msa0490730 | Msa1147740 | -0.809045 | 2.297347e-50 | -8.615850e-47 |
| Msa0490730 | Msa1151910 | -0.807308 | 5.385482e-50 | -8.615850e-47 |
| Msa0490730 | Msa1154280 | -0.803524 | 3.346262e-49 | -8.615850e-47 |
| Msa0490730 | Msa1156340 | 0.805477 | 1.310060e-49 | -8.615850e-47 |
| Msa0490730 | Msa1158310 | -0.815582 | 8.588955e-52 | -8.615850e-47 |
| Msa0490730 | Msa1162550 | 0.848520 | 5.816740e-60 | -8.615850e-47 |
| Msa0490730 | Msa1162780 | -0.804246 | 2.368124e-49 | -8.615850e-47 |
| Msa0490730 | Msa1168160 | -0.812437 | 4.242190e-51 | -8.615850e-47 |
| Msa0490730 | Msa1178180 | -0.858933 | 5.860197e-63 | -8.615850e-47 |
| Msa0490730 | Msa1179120 | -0.802400 | 5.710872e-49 | -8.615850e-47 |
| Msa0490730 | Msa1186950 | 0.824414 | 8.176850e-54 | -8.615850e-47 |
| Msa0490730 | Msa1207220 | -0.807264 | 5.503053e-50 | -8.615850e-47 |
| Msa0490730 | Msa1212940 | -0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa0490730 | Msa1215050 | -0.846374 | 2.261082e-59 | -8.615850e-47 |
| Msa0490730 | Msa1229600 | -0.840972 | 6.299855e-58 | -8.615850e-47 |
| Msa0490730 | Msa1238820 | -0.811761 | 5.956436e-51 | -8.615850e-47 |
| Msa0490730 | Msa1238930 | -0.833002 | 6.849076e-56 | -8.615850e-47 |
| Msa0490730 | Msa1244250 | -0.811419 | 7.068099e-51 | -8.615850e-47 |
| Msa0490730 | Msa1262750 | -0.816940 | 4.266595e-52 | -8.615850e-47 |
| Msa0490730 | Msa1278840 | -0.823570 | 1.289893e-53 | -8.615850e-47 |
| Msa0490730 | Msa1280420 | -0.803388 | 3.570862e-49 | -8.615850e-47 |
| Msa0490730 | Msa1283860 | -0.804349 | 2.253893e-49 | -8.615850e-47 |
| Msa0490730 | Msa1284680 | -0.815317 | 9.834445e-52 | -8.615850e-47 |
| Msa0490730 | Msa1300970 | -0.842515 | 2.467063e-58 | -8.615850e-47 |
| Msa0490730 | Msa1302830 | -0.826242 | 3.021325e-54 | -8.615850e-47 |
| Msa0490730 | Msa1304890 | 0.800157 | 1.644138e-48 | -8.615850e-47 |
| Msa0490730 | Msa1308380 | -0.819178 | 1.331029e-52 | -8.615850e-47 |
| Msa0490730 | Msa1310210 | -0.810532 | 1.099830e-50 | -8.615850e-47 |
| Msa0490730 | Msa1313150 | -0.840371 | 9.052977e-58 | -8.615850e-47 |
| Msa0490730 | Msa1322890 | -0.815761 | 7.833102e-52 | -8.615850e-47 |
| Msa0490730 | Msa1324500 | -0.809293 | 2.032957e-50 | -8.615850e-47 |
| Msa0490730 | Msa1327050 | -0.801800 | 7.589265e-49 | -8.615850e-47 |
| Msa0490730 | Msa1332000 | -0.870027 | 1.990104e-66 | -8.615850e-47 |
| Msa0490730 | Msa1332070 | -0.865140 | 7.328490e-65 | -8.615850e-47 |
| Msa0490730 | Msa1372760 | -0.820108 | 8.163941e-53 | -8.615850e-47 |
| Msa0490730 | Msa1376890 | -0.834510 | 2.875197e-56 | -8.615850e-47 |
| Msa0490730 | Msa1393410 | -0.842825 | 2.041217e-58 | -8.615850e-47 |
| Msa0490730 | Msa1408010 | -0.804486 | 2.110614e-49 | -8.615850e-47 |
| Msa0490730 | Msa1408620 | 0.854780 | 9.801845e-62 | -8.615850e-47 |
| Msa0490730 | Msa1409870 | -0.807907 | 4.017893e-50 | -8.615850e-47 |
| Msa0490730 | Msa1413840 | -0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0490730 | Msa1414520 | -0.800153 | 1.647341e-48 | -8.615850e-47 |
| Msa0490730 | Msa1423880 | -0.845355 | 4.276650e-59 | -8.615850e-47 |
| Msa0490730 | Msa1424680 | -0.800488 | 1.407991e-48 | -8.615850e-47 |
| Msa0490730 | Msa1425090 | -0.813416 | 2.587586e-51 | -8.615850e-47 |
| Msa0490730 | Msa1430680 | -0.801636 | 8.202064e-49 | -8.615850e-47 |
| Msa0490730 | Msa1431430 | -0.827923 | 1.196422e-54 | -8.615850e-47 |
| Msa0490730 | Msa1435420 | -0.842796 | 2.077400e-58 | -8.615850e-47 |
| Msa0490730 | Msa1436480 | -0.802904 | 4.496365e-49 | -8.615850e-47 |
| Msa0490730 | Msa1440740 | -0.806350 | 8.586178e-50 | -8.615850e-47 |
| Msa0490730 | Msa1445390 | 0.806760 | 7.033295e-50 | -8.615850e-47 |
| Msa0490730 | Msa1445610 | 0.818277 | 2.132121e-52 | -8.615850e-47 |
| Msa0490730 | Msa1448640 | -0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa0490730 | Msa1459050 | -0.803830 | 2.891332e-49 | -8.615850e-47 |
| Msa0490730 | Msa1466540 | -0.808465 | 3.055641e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490730 | MtrunA17_Chr3g0081641 | 97.802 | 91 | 2 | 0 | 1 | 91 | 1 | 91 | 1.60e-60 | 179 |
| Msa0490730 | MtrunA17_Chr1g0173721 | 75.000 | 92 | 12 | 3 | 1 | 91 | 1 | 82 | 2.51e-41 | 130 |
| Msa0490730 | MtrunA17_Chr5g0404111 | 39.394 | 66 | 38 | 2 | 1 | 64 | 14 | 79 | 5.20e-13 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490730 | AT4G39235.2 | 64.835 | 91 | 27 | 1 | 1 | 91 | 1 | 86 | 6.83e-36 | 117 |
| Msa0490730 | AT4G39235.1 | 64.835 | 91 | 27 | 1 | 1 | 91 | 1 | 86 | 6.83e-36 | 117 |
| Msa0490730 | AT3G05570.1 | 63.043 | 92 | 31 | 2 | 1 | 91 | 1 | 90 | 1.08e-34 | 114 |
| Msa0490730 | AT2G21640.1 | 50.538 | 93 | 42 | 3 | 1 | 89 | 10 | 102 | 4.94e-23 | 85.1 |
Find 43 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCCTATTTACTCTAATT+TGG | 0.068688 | 3_4:-12397543 | None:intergenic |
| CGTGAGAGAGTAGCATATTT+TGG | 0.162400 | 3_4:-12397508 | Msa0490730:five_prime_UTR |
| CGAGTTTATTCATGCTTCTA+TGG | 0.253989 | 3_4:-12394955 | Msa0490730:CDS |
| TTGCCTATTTACTCTAATTT+GGG | 0.301009 | 3_4:-12397542 | Msa0490730:five_prime_UTR |
| TTGGATCTATTTCAGATGTT+TGG | 0.301015 | 3_4:-12394816 | Msa0490730:intron |
| TTTCCCAAATTAGAGTAAAT+AGG | 0.303855 | 3_4:+12397539 | None:intergenic |
| CGAGAGTTGTTTATGAATGA+TGG | 0.375718 | 3_4:+12397442 | None:intergenic |
| GCATGAAGAAGCCTCATTCT+TGG | 0.389977 | 3_4:-12395000 | Msa0490730:CDS |
| TTCAACTTCTTTCGTAGCCT+TGG | 0.399403 | 3_4:+12394764 | None:intergenic |
| GGCCGACGATGAACTCCGGC+TGG | 0.409676 | 3_4:+12397391 | None:intergenic |
| AGCTATGTTATTACTGTTTG+TGG | 0.415073 | 3_4:+12394597 | None:intergenic |
| TGTTTAACCGAGTCATGTAT+TGG | 0.415747 | 3_4:-12394683 | Msa0490730:three_prime_UTR |
| GTCCAACCCACTTTACTTTG+AGG | 0.419685 | 3_4:-12397466 | Msa0490730:five_prime_UTR |
| CTTCTTCTTTCGACAAGAAG+TGG | 0.455215 | 3_4:+12395022 | None:intergenic |
| GTTTGGTTTGTCCAAGGTAG+TGG | 0.458713 | 3_4:-12394799 | Msa0490730:CDS |
| CTTTCAGAAAACAATTAAGA+AGG | 0.462199 | 3_4:-12394916 | Msa0490730:intron |
| TTTCCGGTGAGTTGAGTTGA+AGG | 0.494159 | 3_4:+12397416 | None:intergenic |
| ATATAAAAGTAGGTACGAGC+AGG | 0.494703 | 3_4:+12394571 | None:intergenic |
| GTATTAAGACAATGTATCTC+AGG | 0.498600 | 3_4:+12394644 | None:intergenic |
| GCTATTGGAACCTCAGATCA+TGG | 0.502244 | 3_4:-12395093 | Msa0490730:exon |
| TTCTGAGTGTCCATGATCTG+AGG | 0.505531 | 3_4:+12395083 | None:intergenic |
| TGTATAAAGATGTCTGTTTG+TGG | 0.516291 | 3_4:+12394620 | None:intergenic |
| GAGAGTTGTTTATGAATGAT+GGG | 0.533641 | 3_4:+12397443 | None:intergenic |
| CTCATTCTTGGAGGATGTGA+AGG | 0.535627 | 3_4:-12394988 | Msa0490730:CDS |
| CTTCACATCCTCCAAGAATG+AGG | 0.544616 | 3_4:+12394989 | None:intergenic |
| GCAACAGCAGCTGATGAAGT+TGG | 0.545155 | 3_4:+12395044 | None:intergenic |
| TGATGGGCCTCAAAGTAAAG+TGG | 0.551751 | 3_4:+12397459 | None:intergenic |
| TACTCTAATTTGGGAAACTG+TGG | 0.555312 | 3_4:-12397533 | Msa0490730:five_prime_UTR |
| CATGACTCGGTTAAACATAG+TGG | 0.555451 | 3_4:+12394689 | None:intergenic |
| GTTCGCTTCAGCCACTACCT+TGG | 0.562123 | 3_4:+12394788 | None:intergenic |
| GGCCTCAAAGTAAAGTGGGT+TGG | 0.562419 | 3_4:+12397464 | None:intergenic |
| TGAAGAAGCCTCATTCTTGG+AGG | 0.565258 | 3_4:-12394997 | Msa0490730:CDS |
| TCAGATGTTTGGTTTGTCCA+AGG | 0.567621 | 3_4:-12394805 | Msa0490730:intron |
| GCCGACGATGAACTCCGGCT+GGG | 0.591358 | 3_4:+12397392 | None:intergenic |
| AAACAGCGAAAACTCCGTCC+AGG | 0.606658 | 3_4:-12397363 | Msa0490730:intron |
| AACTCACCGGAAAACCCAGC+CGG | 0.606982 | 3_4:-12397406 | Msa0490730:five_prime_UTR |
| ACCCAGCCGGAGTTCATCGT+CGG | 0.612988 | 3_4:-12397393 | Msa0490730:five_prime_UTR |
| TCGCCTTCAACTCAACTCAC+CGG | 0.627100 | 3_4:-12397419 | Msa0490730:five_prime_UTR |
| TATAAAAGTAGGTACGAGCA+GGG | 0.632335 | 3_4:+12394572 | None:intergenic |
| GATGGGCCTCAAAGTAAAGT+GGG | 0.634783 | 3_4:+12397460 | None:intergenic |
| TGGTGGCCGACGATGAACTC+CGG | 0.639753 | 3_4:+12397387 | None:intergenic |
| AGTGGCTGAAGCGAACTCCA+AGG | 0.641621 | 3_4:-12394781 | Msa0490730:CDS |
| AATGTGTCCAATACATGACT+CGG | 0.646526 | 3_4:+12394676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATGTAGAAATATTA+TGG | - | chr3_4:12394898-12394917 | Msa0490730:intron | 10.0% |
| !!! | ATTAGAATTATTTTTTGAAT+TGG | - | chr3_4:12394925-12394944 | Msa0490730:CDS | 10.0% |
| !! | TCTACATTAAATTATCAAAA+CGG | + | chr3_4:12394891-12394910 | None:intergenic | 15.0% |
| !!! | AATTGAAAATTATCTTGTTT+AGG | - | chr3_4:12394997-12395016 | Msa0490730:CDS | 15.0% |
| !!! | ATTGAAAATTATCTTGTTTA+GGG | - | chr3_4:12394998-12395017 | Msa0490730:CDS | 15.0% |
| !!! | ATGAAATTTTTGCAAAATTT+TGG | - | chr3_4:12395432-12395451 | Msa0490730:intron | 15.0% |
| !! | TTCTTTATAAATAAACTATG+CGG | + | chr3_4:12396192-12396211 | None:intergenic | 15.0% |
| !!! | ATTACTAAATTTTACAAGTT+TGG | + | chr3_4:12396324-12396343 | None:intergenic | 15.0% |
| !! | TTAGAATATTTAAAAGCAAA+AGG | + | chr3_4:12396698-12396717 | None:intergenic | 15.0% |
| !!! | GTTATTGCATTTTAATATTT+TGG | - | chr3_4:12396898-12396917 | Msa0490730:intron | 15.0% |
| !! | AGTTAAACATTAGTATATAT+CGG | + | chr3_4:12396963-12396982 | None:intergenic | 15.0% |
| !!! | ACAAATTTACTCTTTTAAAA+CGG | + | chr3_4:12397402-12397421 | None:intergenic | 15.0% |
| !!! | GAATTTCAAATGATATGTTT+TGG | - | chr3_4:12394947-12394966 | Msa0490730:CDS | 20.0% |
| !!! | GATTTTAACCATGAAAATTT+TGG | - | chr3_4:12395877-12395896 | Msa0490730:intron | 20.0% |
| !!! | AACAAAATCCAAAATTTTCA+TGG | + | chr3_4:12395888-12395907 | None:intergenic | 20.0% |
| !! | TGAAATAACAATTGATATGA+CGG | + | chr3_4:12396515-12396534 | None:intergenic | 20.0% |
| !!! | AAAAGGTCAACATTTTTTTA+AGG | + | chr3_4:12396681-12396700 | None:intergenic | 20.0% |
| ! | TTTCCCAAATTAGAGTAAAT+AGG | + | chr3_4:12394585-12394604 | None:intergenic | 25.0% |
| !! | TCTTGTTTAGGGTTATTTAT+TGG | - | chr3_4:12395009-12395028 | Msa0490730:CDS | 25.0% |
| !! | TTTAGGGTTATTTATTGGTT+TGG | - | chr3_4:12395014-12395033 | Msa0490730:CDS | 25.0% |
| !!! | CTAGCGATTTGTTAAAATTT+TGG | + | chr3_4:12395186-12395205 | None:intergenic | 25.0% |
| ! | AATGTACATGGCTTAATAAT+AGG | - | chr3_4:12395494-12395513 | Msa0490730:intron | 25.0% |
| !! | ATGCATGTTTTTCATTTGTA+TGG | + | chr3_4:12395828-12395847 | None:intergenic | 25.0% |
| !!! | AATTTAGTGTGAGTTGTTTT+TGG | - | chr3_4:12395910-12395929 | Msa0490730:intron | 25.0% |
| !!! | TGAGTTGTTTTTGGAAATTA+AGG | - | chr3_4:12395919-12395938 | Msa0490730:intron | 25.0% |
| ! | AAAAGATAAAGCATGCAATA+AGG | + | chr3_4:12396131-12396150 | None:intergenic | 25.0% |
| ! | ATAAATAAACTATGCGGATT+TGG | + | chr3_4:12396186-12396205 | None:intergenic | 25.0% |
| !!! | CTATATTTTGAAGCATTATG+CGG | - | chr3_4:12396228-12396247 | Msa0490730:intron | 25.0% |
| ! | ACCTTATTAGTCAATGAAAT+CGG | - | chr3_4:12396547-12396566 | Msa0490730:intron | 25.0% |
| ! | AAATTTCTATCATCAAGTAG+TGG | + | chr3_4:12396636-12396655 | None:intergenic | 25.0% |
| !!! | AACATTTTTTTAAGGACAGA+TGG | + | chr3_4:12396673-12396692 | None:intergenic | 25.0% |
| !!! | TAACTTTTGAGTATTACGTA+TGG | - | chr3_4:12396786-12396805 | Msa0490730:intron | 25.0% |
| !!! | AACTTTTGAGTATTACGTAT+GGG | - | chr3_4:12396787-12396806 | Msa0490730:intron | 25.0% |
| ! | CATGAAAATCTAAATGACAT+TGG | + | chr3_4:12396834-12396853 | None:intergenic | 25.0% |
| !! | TTGATGATAATTGAGACTTA+TGG | - | chr3_4:12396990-12397009 | Msa0490730:intron | 25.0% |
| ! | TGATGATAATTGAGACTTAT+GGG | - | chr3_4:12396991-12397010 | Msa0490730:intron | 25.0% |
| ! | CTTTCAGAAAACAATTAAGA+AGG | - | chr3_4:12397205-12397224 | Msa0490730:intron | 25.0% |
| ! | TAAATTTAACAGCATAGCTT+TGG | + | chr3_4:12397244-12397263 | None:intergenic | 25.0% |
| GAGAGTTGTTTATGAATGAT+GGG | + | chr3_4:12394681-12394700 | None:intergenic | 30.0% | |
| GAAGCGAAATTAGAAAAAGA+AGG | + | chr3_4:12394788-12394807 | None:intergenic | 30.0% | |
| ATATTTATTCTTTCCAGTGG+CGG | + | chr3_4:12394868-12394887 | None:intergenic | 30.0% | |
| AAGACACTGTTGAAAAACAA+CGG | - | chr3_4:12395079-12395098 | Msa0490730:exon | 30.0% | |
| !! | ATGCAATTTGGCTTGAAATA+TGG | - | chr3_4:12395217-12395236 | Msa0490730:intron | 30.0% |
| CTTGAAATATGGTCAAATAG+TGG | - | chr3_4:12395228-12395247 | Msa0490730:intron | 30.0% | |
| GTTAAAACACTTCTTTGCTA+CGG | + | chr3_4:12395355-12395374 | None:intergenic | 30.0% | |
| TTGTTTCGAGATAATGTACA+TGG | - | chr3_4:12395482-12395501 | Msa0490730:intron | 30.0% | |
| AAATATCACGCTATTATGCA+AGG | + | chr3_4:12395584-12395603 | None:intergenic | 30.0% | |
| !! | TGATATTTTTGTTCTAGTGG+AGG | - | chr3_4:12395596-12395615 | Msa0490730:intron | 30.0% |
| TGCTATGCAATTGTTAAATC+AGG | - | chr3_4:12395641-12395660 | Msa0490730:intron | 30.0% | |
| AAACGTATTCTCTGCATATT+TGG | - | chr3_4:12395761-12395780 | Msa0490730:intron | 30.0% | |
| CATTTGTATGGCTCAAAAAA+TGG | + | chr3_4:12395816-12395835 | None:intergenic | 30.0% | |
| !! | TTCTTTTGAAAGCTTGCATT+AGG | - | chr3_4:12395855-12395874 | Msa0490730:intron | 30.0% |
| GTTGTGTATATGTCTTTATC+TGG | - | chr3_4:12395946-12395965 | Msa0490730:intron | 30.0% | |
| !! | TATTTTTGTCGCTCATTGAA+TGG | - | chr3_4:12395991-12396010 | Msa0490730:intron | 30.0% |
| TACATTGCAAGACTAATTAC+AGG | + | chr3_4:12396029-12396048 | None:intergenic | 30.0% | |
| ATGCTTCAAAATATAGTTGC+AGG | + | chr3_4:12396224-12396243 | None:intergenic | 30.0% | |
| TTCAATTTCCAATGCACTTT+AGG | - | chr3_4:12396253-12396272 | Msa0490730:intron | 30.0% | |
| ATATATCACCTAAAGTGCAT+TGG | + | chr3_4:12396264-12396283 | None:intergenic | 30.0% | |
| TATGAACTTTAGCTGTTCTA+AGG | + | chr3_4:12396386-12396405 | None:intergenic | 30.0% | |
| AATACAAGCACAAAAATCTC+TGG | + | chr3_4:12396440-12396459 | None:intergenic | 30.0% | |
| ! | AGATTTTTGTGCTTGTATTG+TGG | - | chr3_4:12396441-12396460 | Msa0490730:intron | 30.0% |
| TTGTCTGAATTCGGTTATAA+CGG | - | chr3_4:12396589-12396608 | Msa0490730:intron | 30.0% | |
| TATTCTAATTCTTTACCTGC+AGG | - | chr3_4:12396710-12396729 | Msa0490730:intron | 30.0% | |
| ATTCTAATTCTTTACCTGCA+GGG | - | chr3_4:12396711-12396730 | Msa0490730:intron | 30.0% | |
| AATCTAAATGACATTGGCAA+TGG | + | chr3_4:12396828-12396847 | None:intergenic | 30.0% | |
| !! | ATTTAAGTTGTTCTAGTGAG+AGG | + | chr3_4:12396871-12396890 | None:intergenic | 30.0% |
| !! | CTTAATTGTTTTCTGAAAGC+AGG | + | chr3_4:12397204-12397223 | None:intergenic | 30.0% |
| TTGGATCTATTTCAGATGTT+TGG | - | chr3_4:12397305-12397324 | Msa0490730:intron | 30.0% | |
| GTATTAAGACAATGTATCTC+AGG | + | chr3_4:12397480-12397499 | None:intergenic | 30.0% | |
| TGTATAAAGATGTCTGTTTG+TGG | + | chr3_4:12397504-12397523 | None:intergenic | 30.0% | |
| AGCTATGTTATTACTGTTTG+TGG | + | chr3_4:12397527-12397546 | None:intergenic | 30.0% | |
| TACTCTAATTTGGGAAACTG+TGG | - | chr3_4:12394588-12394607 | Msa0490730:three_prime_UTR | 35.0% | |
| ! | GTGAGAGAGTAGCATATTTT+GGG | - | chr3_4:12394614-12394633 | Msa0490730:three_prime_UTR | 35.0% |
| CGAGAGTTGTTTATGAATGA+TGG | + | chr3_4:12394682-12394701 | None:intergenic | 35.0% | |
| TTAGAAAAAGAAGGCAAACC+TGG | + | chr3_4:12394779-12394798 | None:intergenic | 35.0% | |
| CGGATATTTATTCTTTCCAG+TGG | + | chr3_4:12394871-12394890 | None:intergenic | 35.0% | |
| AGACACTGTTGAAAAACAAC+GGG | - | chr3_4:12395080-12395099 | Msa0490730:exon | 35.0% | |
| ACGCGATTTAGTATAAAGTG+TGG | - | chr3_4:12395299-12395318 | Msa0490730:intron | 35.0% | |
| ! | TACCAGTTTTCTTCCTAACT+TGG | - | chr3_4:12395551-12395570 | Msa0490730:intron | 35.0% |
| ATCCAAGTTAGGAAGAAAAC+TGG | + | chr3_4:12395556-12395575 | None:intergenic | 35.0% | |
| !! | GCGTGATATTTTTGTTCTAG+TGG | - | chr3_4:12395593-12395612 | Msa0490730:intron | 35.0% |
| ! | GCCGATTTCATTGACTAATA+AGG | + | chr3_4:12396551-12396570 | None:intergenic | 35.0% |
| CCGAATTCAGACAAAAGATA+GGG | + | chr3_4:12396583-12396602 | None:intergenic | 35.0% | |
| ! | CCCTATCTTTTGTCTGAATT+CGG | - | chr3_4:12396580-12396599 | Msa0490730:intron | 35.0% |
| ACCGAATTCAGACAAAAGAT+AGG | + | chr3_4:12396584-12396603 | None:intergenic | 35.0% | |
| TTTCTATCATCAAGTAGTGG+AGG | + | chr3_4:12396633-12396652 | None:intergenic | 35.0% | |
| !! | GCATAACTTGTTACAGCTAT+TGG | - | chr3_4:12397013-12397032 | Msa0490730:intron | 35.0% |
| CGAGTTTATTCATGCTTCTA+TGG | - | chr3_4:12397166-12397185 | Msa0490730:intron | 35.0% | |
| TCAGCAAATGACAAAGAATG+TGG | + | chr3_4:12397273-12397292 | None:intergenic | 35.0% | |
| ! | TGTCATTTGCTGATATAGTG+TGG | - | chr3_4:12397280-12397299 | Msa0490730:intron | 35.0% |
| ! | TTGCTGATATAGTGTGGTTT+TGG | - | chr3_4:12397286-12397305 | Msa0490730:intron | 35.0% |
| !!! | TCTTTTAAAACGGTCTGAAG+AGG | + | chr3_4:12397392-12397411 | None:intergenic | 35.0% |
| TGTTTAACCGAGTCATGTAT+TGG | - | chr3_4:12397438-12397457 | Msa0490730:five_prime_UTR | 35.0% | |
| AATGTGTCCAATACATGACT+CGG | + | chr3_4:12397448-12397467 | None:intergenic | 35.0% | |
| ! | CGTGAGAGAGTAGCATATTT+TGG | - | chr3_4:12394613-12394632 | Msa0490730:three_prime_UTR | 40.0% |
| AAAAAGAAGGCAAACCTGGA+CGG | + | chr3_4:12394775-12394794 | None:intergenic | 40.0% | |
| TGTTGAAAAACAACGGGTAC+AGG | - | chr3_4:12395086-12395105 | Msa0490730:exon | 40.0% | |
| ! | GTGTTTTGCGACATGCAATT+TGG | - | chr3_4:12395205-12395224 | Msa0490730:intron | 40.0% |
| GCAAGGAAAAGATCCAAGTT+AGG | + | chr3_4:12395567-12395586 | None:intergenic | 40.0% | |
| GAGAATACGTTTGTCGTTGT+AGG | + | chr3_4:12395753-12395772 | None:intergenic | 40.0% | |
| !! | TGGCATGTGTTCTAGACTTT+TGG | - | chr3_4:12395781-12395800 | Msa0490730:intron | 40.0% |
| !! | GCTCATTGAATGGATTGCTT+CGG | - | chr3_4:12396001-12396020 | Msa0490730:intron | 40.0% |
| !! | CTCATTGAATGGATTGCTTC+GGG | - | chr3_4:12396002-12396021 | Msa0490730:intron | 40.0% |
| !! | TTTCAGTGTTTCTAGAGACG+TGG | - | chr3_4:12396086-12396105 | Msa0490730:intron | 40.0% |
| ATTCAGACAAAAGATAGGGC+CGG | + | chr3_4:12396579-12396598 | None:intergenic | 40.0% | |
| TCTGAATTCGGTTATAACGG+AGG | - | chr3_4:12396592-12396611 | Msa0490730:intron | 40.0% | |
| !!! | ATGAAGTTGGCTTTTCAGCT+TGG | + | chr3_4:12397067-12397086 | None:intergenic | 40.0% |
| CTTCTTCTTTCGACAAGAAG+TGG | + | chr3_4:12397102-12397121 | None:intergenic | 40.0% | |
| !! | TCAGATGTTTGGTTTGTCCA+AGG | - | chr3_4:12397316-12397335 | Msa0490730:intron | 40.0% |
| TTCAACTTCTTTCGTAGCCT+TGG | + | chr3_4:12397360-12397379 | None:intergenic | 40.0% | |
| !! | CATGACTCGGTTAAACATAG+TGG | + | chr3_4:12397435-12397454 | None:intergenic | 40.0% |
| GTCCAACCCACTTTACTTTG+AGG | - | chr3_4:12394655-12394674 | Msa0490730:three_prime_UTR | 45.0% | |
| GATGGGCCTCAAAGTAAAGT+GGG | + | chr3_4:12394664-12394683 | None:intergenic | 45.0% | |
| ! | TGATGGGCCTCAAAGTAAAG+TGG | + | chr3_4:12394665-12394684 | None:intergenic | 45.0% |
| !! | TTTCCGGTGAGTTGAGTTGA+AGG | + | chr3_4:12394708-12394727 | None:intergenic | 45.0% |
| TGAAAAACAACGGGTACAGG+CGG | - | chr3_4:12395089-12395108 | Msa0490730:exon | 45.0% | |
| CCATCGAGCATCACTGAAAA+TGG | + | chr3_4:12395384-12395403 | None:intergenic | 45.0% | |
| ! | CCATTTTCAGTGATGCTCGA+TGG | - | chr3_4:12395381-12395400 | Msa0490730:intron | 45.0% |
| TCAATGAAATCGGCACAAGC+CGG | - | chr3_4:12396557-12396576 | Msa0490730:intron | 45.0% | |
| AAGTTGTTCTAGTGAGAGGC+AGG | + | chr3_4:12396867-12396886 | None:intergenic | 45.0% | |
| GCTATTGGAACCTCAGATCA+TGG | - | chr3_4:12397028-12397047 | Msa0490730:intron | 45.0% | |
| TTCTGAGTGTCCATGATCTG+AGG | + | chr3_4:12397041-12397060 | None:intergenic | 45.0% | |
| GCATGAAGAAGCCTCATTCT+TGG | - | chr3_4:12397121-12397140 | Msa0490730:intron | 45.0% | |
| TGAAGAAGCCTCATTCTTGG+AGG | - | chr3_4:12397124-12397143 | Msa0490730:intron | 45.0% | |
| CTTCACATCCTCCAAGAATG+AGG | + | chr3_4:12397135-12397154 | None:intergenic | 45.0% | |
| CTCATTCTTGGAGGATGTGA+AGG | - | chr3_4:12397133-12397152 | Msa0490730:intron | 45.0% | |
| !! | GTTTGGTTTGTCCAAGGTAG+TGG | - | chr3_4:12397322-12397341 | Msa0490730:intron | 45.0% |
| GGCCTCAAAGTAAAGTGGGT+TGG | + | chr3_4:12394660-12394679 | None:intergenic | 50.0% | |
| TCGCCTTCAACTCAACTCAC+CGG | - | chr3_4:12394702-12394721 | Msa0490730:three_prime_UTR | 50.0% | |
| ! | GGAGTTTTCGCTGTTTGTGG+TGG | + | chr3_4:12394754-12394773 | None:intergenic | 50.0% |
| ! | GACGGAGTTTTCGCTGTTTG+TGG | + | chr3_4:12394757-12394776 | None:intergenic | 50.0% |
| AAACAGCGAAAACTCCGTCC+AGG | - | chr3_4:12394758-12394777 | Msa0490730:CDS | 50.0% | |
| TCGGGCGTGTTACAGGAAAA+GGG | + | chr3_4:12394810-12394829 | None:intergenic | 50.0% | |
| ATCGGGCGTGTTACAGGAAA+AGG | + | chr3_4:12394811-12394830 | None:intergenic | 50.0% | |
| TCGCGCTTGAATCGGATCAT+CGG | + | chr3_4:12394829-12394848 | None:intergenic | 50.0% | |
| TCCGATTCAAGCGCGATTTG+CGG | - | chr3_4:12394833-12394852 | Msa0490730:intron | 50.0% | |
| !! | TGATGCTCGATGGACTACAC+TGG | - | chr3_4:12395391-12395410 | Msa0490730:intron | 50.0% |
| AGTGGAGGCTTCAATCCTTG+TGG | + | chr3_4:12396618-12396637 | None:intergenic | 50.0% | |
| AAACACAAGTCATGCCCTGC+AGG | + | chr3_4:12396728-12396747 | None:intergenic | 50.0% | |
| GCAACAGCAGCTGATGAAGT+TGG | + | chr3_4:12397080-12397099 | None:intergenic | 50.0% | |
| AACTCACCGGAAAACCCAGC+CGG | - | chr3_4:12394715-12394734 | Msa0490730:exon | 55.0% | |
| ! | TGAACTCCGGCTGGGTTTTC+CGG | + | chr3_4:12394724-12394743 | None:intergenic | 55.0% |
| CGCGCTTGAATCGGATCATC+GGG | + | chr3_4:12394828-12394847 | None:intergenic | 55.0% | |
| GCCGCAAATCGCGCTTGAAT+CGG | + | chr3_4:12394837-12394856 | None:intergenic | 55.0% | |
| ! | CGGTTATAACGGAGGCCACA+AGG | - | chr3_4:12396600-12396619 | Msa0490730:intron | 55.0% |
| GTTCGCTTCAGCCACTACCT+TGG | + | chr3_4:12397336-12397355 | None:intergenic | 55.0% | |
| AGTGGCTGAAGCGAACTCCA+AGG | - | chr3_4:12397340-12397359 | Msa0490730:intron | 55.0% | |
| ACCCAGCCGGAGTTCATCGT+CGG | - | chr3_4:12394728-12394747 | Msa0490730:CDS | 60.0% | |
| TGGTGGCCGACGATGAACTC+CGG | + | chr3_4:12394737-12394756 | None:intergenic | 60.0% | |
| CGGATCATCGGGCGTGTTAC+AGG | + | chr3_4:12394817-12394836 | None:intergenic | 60.0% | |
| GCCGACGATGAACTCCGGCT+GGG | + | chr3_4:12394732-12394751 | None:intergenic | 65.0% | |
| GCGGCTTCGATAACCGCCAC+TGG | - | chr3_4:12394852-12394871 | Msa0490730:intron | 65.0% | |
| GGCCGACGATGAACTCCGGC+TGG | + | chr3_4:12394733-12394752 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 12394582 | 12397561 | 12394582 | ID=Msa0490730;Name=Msa0490730 |
| chr3_4 | mRNA | 12394582 | 12397561 | 12394582 | ID=Msa0490730-mRNA-1;Parent=Msa0490730;Name=Msa0490730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=216|1|1|1|0.5|0.66|3|146|91 |
| chr3_4 | exon | 12394582 | 12394823 | 12394582 | ID=Msa0490730-mRNA-1:exon:3861;Parent=Msa0490730-mRNA-1 |
| chr3_4 | exon | 12394917 | 12395114 | 12394917 | ID=Msa0490730-mRNA-1:exon:3860;Parent=Msa0490730-mRNA-1 |
| chr3_4 | exon | 12397364 | 12397561 | 12397364 | ID=Msa0490730-mRNA-1:exon:3859;Parent=Msa0490730-mRNA-1 |
| chr3_4 | five_prime_UTR | 12397364 | 12397561 | 12397364 | ID=Msa0490730-mRNA-1:five_prime_utr;Parent=Msa0490730-mRNA-1 |
| chr3_4 | five_prime_UTR | 12395097 | 12395114 | 12395097 | ID=Msa0490730-mRNA-1:five_prime_utr;Parent=Msa0490730-mRNA-1 |
| chr3_4 | CDS | 12394917 | 12395096 | 12394917 | ID=Msa0490730-mRNA-1:cds;Parent=Msa0490730-mRNA-1 |
| chr3_4 | CDS | 12394728 | 12394823 | 12394728 | ID=Msa0490730-mRNA-1:cds;Parent=Msa0490730-mRNA-1 |
| chr3_4 | three_prime_UTR | 12394582 | 12394727 | 12394582 | ID=Msa0490730-mRNA-1:three_prime_utr;Parent=Msa0490730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
