Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0388150 | XP_003617946.1 | 99.235 | 1308 | 10 | 0 | 1 | 1308 | 1 | 1308 | 0.0 | 2698 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0388150 | sp|F4IGA5|NU133_ARATH | 56.255 | 1335 | 507 | 18 | 1 | 1308 | 1 | 1285 | 0.0 | 1427 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0388150 | G7KEN0 | 99.235 | 1308 | 10 | 0 | 1 | 1308 | 1 | 1308 | 0.0 | 2698 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0027230 | Msa0388150 | 0.808573 | 2.897760e-50 | -8.615850e-47 |
Msa0054480 | Msa0388150 | 0.803270 | 3.776253e-49 | -8.615850e-47 |
Msa0070700 | Msa0388150 | 0.807177 | 5.741021e-50 | -8.615850e-47 |
Msa0075220 | Msa0388150 | 0.803996 | 2.670556e-49 | -8.615850e-47 |
Msa0137880 | Msa0388150 | 0.819760 | 9.803980e-53 | -8.615850e-47 |
Msa0144370 | Msa0388150 | 0.808233 | 3.425231e-50 | -8.615850e-47 |
Msa0167520 | Msa0388150 | 0.818186 | 2.235226e-52 | -8.615850e-47 |
Msa0187120 | Msa0388150 | 0.800194 | 1.615649e-48 | -8.615850e-47 |
Msa0212930 | Msa0388150 | 0.823680 | 1.215926e-53 | -8.615850e-47 |
Msa0379770 | Msa0388150 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
Msa0388150 | Msa0391320 | 0.828178 | 1.038620e-54 | -8.615850e-47 |
Msa0388150 | Msa0402650 | 0.809236 | 2.090314e-50 | -8.615850e-47 |
Msa0388150 | Msa0449210 | 0.836705 | 8.000752e-57 | -8.615850e-47 |
Msa0388150 | Msa0576690 | 0.811450 | 6.957362e-51 | -8.615850e-47 |
Msa0388150 | Msa0602690 | 0.828506 | 8.656959e-55 | -8.615850e-47 |
Msa0388150 | Msa0643570 | 0.812973 | 3.238035e-51 | -8.615850e-47 |
Msa0388150 | Msa0716830 | 0.835796 | 1.362123e-56 | -8.615850e-47 |
Msa0388150 | Msa0788420 | 0.991496 | 5.854452e-188 | -8.615850e-47 |
Msa0388150 | Msa0793800 | 0.801305 | 9.584969e-49 | -8.615850e-47 |
Msa0388150 | Msa0825530 | 0.802971 | 4.355800e-49 | -8.615850e-47 |
Msa0388150 | Msa0826570 | 0.995611 | 5.020081e-218 | -8.615850e-47 |
Msa0388150 | Msa0919770 | 0.817911 | 2.579018e-52 | -8.615850e-47 |
Msa0388150 | Msa0938480 | 0.811191 | 7.920534e-51 | -8.615850e-47 |
Msa0388150 | Msa0945110 | 0.815008 | 1.151675e-51 | -8.615850e-47 |
Msa0388150 | Msa1009820 | 0.801759 | 7.737735e-49 | -8.615850e-47 |
Msa0388150 | Msa1106700 | 0.809607 | 1.740797e-50 | -8.615850e-47 |
Msa0388150 | Msa1128600 | 0.812000 | 5.284166e-51 | -8.615850e-47 |
Msa0388150 | Msa1225700 | 0.829568 | 4.786993e-55 | -8.615850e-47 |
Msa0388150 | Msa1382560 | 0.800332 | 1.514837e-48 | -8.615850e-47 |
Msa0388150 | Msa1384650 | 0.815020 | 1.145024e-51 | -8.615850e-47 |
Msa0388150 | Msa1420210 | 0.805084 | 1.583615e-49 | -8.615850e-47 |
Msa0388150 | Msa1446950 | 0.832114 | 1.136762e-55 | -8.615850e-47 |
Msa0253200 | Msa0388150 | 0.828686 | 7.831009e-55 | -8.615850e-47 |
Msa0267110 | Msa0388150 | 0.824700 | 7.002820e-54 | -8.615850e-47 |
Msa0279700 | Msa0388150 | 0.800424 | 1.450744e-48 | -8.615850e-47 |
Msa0283800 | Msa0388150 | 0.849713 | 2.710331e-60 | -8.615850e-47 |
Msa0292030 | Msa0388150 | 0.831162 | 1.951364e-55 | -8.615850e-47 |
Msa0321920 | Msa0388150 | 0.838034 | 3.654739e-57 | -8.615850e-47 |
Msa0330310 | Msa0388150 | 0.814915 | 1.207829e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0388150 | MtrunA17_Chr5g0447511 | 99.235 | 1308 | 10 | 0 | 1 | 1308 | 1 | 1308 | 0.0 | 2698 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0388150 | AT2G05120.2 | 53.823 | 1334 | 476 | 18 | 1 | 1308 | 1 | 1220 | 0.0 | 1338 |
Msa0388150 | AT2G05120.1 | 60.953 | 986 | 368 | 8 | 329 | 1308 | 1 | 975 | 0.0 | 1201 |
Find 325 sgRNAs with CRISPR-Local
Find 632 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATGACTGATTCGAAAATT+AGG | 0.125114 | 3_1:+92467289 | None:intergenic |
ACATGCCTTGCAAATTATTT+TGG | 0.154538 | 3_1:-92462701 | Msa0388150:CDS |
TCATCTTCAACTCTAGCTTT+TGG | 0.192580 | 3_1:+92464301 | None:intergenic |
CTTTAATCCTGTATCATATT+TGG | 0.196953 | 3_1:-92458283 | Msa0388150:three_prime_UTR |
CAAGAGTCACAGAAAACTTT+TGG | 0.217371 | 3_1:-92458781 | Msa0388150:CDS |
GATTCGAAAATTAGGGTTTA+TGG | 0.237920 | 3_1:+92467297 | None:intergenic |
GTCAAAGCATGTTCTAATTA+TGG | 0.251677 | 3_1:+92462342 | None:intergenic |
ATAAGAATGAGAACCATTTA+TGG | 0.257036 | 3_1:-92462318 | Msa0388150:CDS |
GCTTCAGAGCTAGCCCTTCT+TGG | 0.257823 | 3_1:+92463911 | None:intergenic |
CATGACTGATTCGAAAATTA+GGG | 0.262882 | 3_1:+92467290 | None:intergenic |
GAGTACAAATGAGAGGATTT+TGG | 0.262940 | 3_1:-92464353 | Msa0388150:CDS |
CAACACCAGTTGAGCGGTTC+TGG | 0.274945 | 3_1:+92462620 | None:intergenic |
ATCATATTTGGTAGTGGTTC+TGG | 0.277800 | 3_1:-92458271 | Msa0388150:three_prime_UTR |
GTGCCGGTGGGAGGACGGTT+AGG | 0.279164 | 3_1:+92467153 | None:intergenic |
AATTGTGATAGCTCCTCTTT+TGG | 0.288945 | 3_1:-92465132 | Msa0388150:CDS |
GTATGAATGTTTCAAGGCTT+TGG | 0.291904 | 3_1:-92464588 | Msa0388150:CDS |
TTTGAAGATTCTTAAATTGC+AGG | 0.295068 | 3_1:-92460080 | Msa0388150:intron |
AGCTCTGAAGCATGGGGTTC+TGG | 0.295463 | 3_1:-92463899 | Msa0388150:CDS |
AAACATGGAGACTTCAACTT+TGG | 0.296898 | 3_1:-92458559 | Msa0388150:CDS |
TGGATGCTCCTTCACGAAAA+AGG | 0.302380 | 3_1:+92460957 | None:intergenic |
CACAATTTAATCAAGTCTTC+TGG | 0.302486 | 3_1:+92458876 | None:intergenic |
CTGTTGTCCGGAAGGGAATA+TGG | 0.302757 | 3_1:-92462255 | Msa0388150:CDS |
AGAATTTGAAGCTACCTATA+AGG | 0.305229 | 3_1:-92462005 | Msa0388150:intron |
AGGAGCATCCAGATCTTCTT+TGG | 0.306981 | 3_1:-92460945 | Msa0388150:CDS |
TAACAGAGAAAGCAGGAATA+TGG | 0.307360 | 3_1:-92464066 | Msa0388150:CDS |
GTGATTGCTTCTGCAGTTCC+CGG | 0.312528 | 3_1:-92464886 | Msa0388150:CDS |
CCTCTCAAAGGCGGTGATTT+GGG | 0.312712 | 3_1:-92464748 | Msa0388150:CDS |
TTCTTCAAAAGTTTGACTTT+GGG | 0.313144 | 3_1:+92458614 | None:intergenic |
CCCTCTCAAAGGCGGTGATT+TGG | 0.314354 | 3_1:-92464749 | Msa0388150:CDS |
GATTCCTTACTAGAATGATA+TGG | 0.321649 | 3_1:+92464676 | None:intergenic |
TCTAAGATTGCAGCCTTTGC+AGG | 0.325094 | 3_1:-92460766 | Msa0388150:intron |
CCAACTACCAGTATCGTAAT+TGG | 0.325316 | 3_1:+92465170 | None:intergenic |
TTTGGGATTATAACTTCAAT+AGG | 0.325655 | 3_1:+92464319 | None:intergenic |
GTGTAGCGTTTCTATGATAA+TGG | 0.328473 | 3_1:+92464188 | None:intergenic |
TGTTTCAAGGCTTTGGTCTC+AGG | 0.336011 | 3_1:-92464581 | Msa0388150:CDS |
AAATTGAATAATAACCTTAT+AGG | 0.337834 | 3_1:+92461991 | None:intergenic |
CTTCTTCAAAAGTTTGACTT+TGG | 0.338124 | 3_1:+92458613 | None:intergenic |
AAGGTCTATTAAATGAATAT+TGG | 0.343308 | 3_1:-92462072 | Msa0388150:CDS |
TGTTCATCACAAACAACTTT+CGG | 0.346636 | 3_1:+92466938 | None:intergenic |
CTTGAAAAGCTAGAAACTTC+TGG | 0.347194 | 3_1:-92463755 | Msa0388150:CDS |
TGCCATTAGCATCAGCTTGC+CGG | 0.347487 | 3_1:+92458479 | None:intergenic |
TTGACCATGCAATATAAATC+AGG | 0.350558 | 3_1:-92464388 | Msa0388150:CDS |
GTGCTACTTGAGGCATATTC+TGG | 0.353169 | 3_1:-92462133 | Msa0388150:CDS |
GTTCGCACGCCCTCTGGATC+TGG | 0.359144 | 3_1:+92462383 | None:intergenic |
AGTACCATAAGTAAAGAAAA+TGG | 0.359893 | 3_1:-92458216 | Msa0388150:three_prime_UTR |
CATGAGAGTTCGGGATCTAC+TGG | 0.360042 | 3_1:-92461072 | Msa0388150:CDS |
TTTCCATGAGGCTTCGAATA+GGG | 0.361995 | 3_1:-92464267 | Msa0388150:CDS |
TTGTGTGCAGCATGAGAGTT+CGG | 0.362428 | 3_1:-92461082 | Msa0388150:intron |
AGCATCAGCTTGCCGGCAAC+TGG | 0.364080 | 3_1:+92458486 | None:intergenic |
TTCAGAGTCGAGTTTAGTTC+TGG | 0.364127 | 3_1:-92464610 | Msa0388150:CDS |
GCCACGATGAGCTGTGTTCC+AGG | 0.369066 | 3_1:-92463544 | Msa0388150:CDS |
AACAATTCTCTGAGTTGTTA+AGG | 0.369937 | 3_1:-92461008 | Msa0388150:CDS |
TTCAGATGTCAGGTGCCCTT+TGG | 0.371866 | 3_1:-92462573 | Msa0388150:CDS |
CTTTGGTCTCAGGAAATTGT+TGG | 0.374379 | 3_1:-92464571 | Msa0388150:CDS |
AACATGGAGACTTCAACTTT+GGG | 0.377183 | 3_1:-92458558 | Msa0388150:CDS |
AGGTCTATTAAATGAATATT+GGG | 0.377388 | 3_1:-92462071 | Msa0388150:CDS |
TTGAGAGTTCGCACGCCCTC+TGG | 0.377508 | 3_1:+92462377 | None:intergenic |
TCAGATGTCAGGTGCCCTTT+GGG | 0.378722 | 3_1:-92462572 | Msa0388150:CDS |
AATATCTACATTAGAATTTG+AGG | 0.379503 | 3_1:+92462594 | None:intergenic |
GAAAGATCTGGCAGGTCAAA+AGG | 0.379750 | 3_1:-92464524 | Msa0388150:CDS |
CCAGAGAAGGCTGTCGTACT+TGG | 0.382512 | 3_1:-92464037 | Msa0388150:CDS |
CAGGAGGTGGATACCATAAA+TGG | 0.383739 | 3_1:+92462305 | None:intergenic |
ACACAGCTCATCGTGGCATT+TGG | 0.386747 | 3_1:+92463550 | None:intergenic |
GGATTGTTCTTCTTCTTCTT+CGG | 0.388009 | 3_1:+92467255 | None:intergenic |
TTGCCGTGTCTGCCTCTTGA+AGG | 0.394115 | 3_1:+92464954 | None:intergenic |
CCACCGGCACTCCCGCTCCT+TGG | 0.396476 | 3_1:-92467140 | Msa0388150:CDS |
GGATCAACCGTCATAATATC+TGG | 0.400664 | 3_1:-92464232 | Msa0388150:CDS |
TGGCAGGTCAAAAGGGAATC+TGG | 0.403669 | 3_1:-92464516 | Msa0388150:CDS |
TGTGTGCAGCATGAGAGTTC+GGG | 0.404164 | 3_1:-92461081 | Msa0388150:intron |
TTGGGATTATAACTTCAATA+GGG | 0.405007 | 3_1:+92464320 | None:intergenic |
CAGTTCTTAAATGATACATC+AGG | 0.406053 | 3_1:-92462211 | Msa0388150:CDS |
CGTTGTTTCCACCCAACTCT+TGG | 0.407473 | 3_1:-92463618 | Msa0388150:CDS |
TACCAAGGTGTTAAACCTTC+AGG | 0.409467 | 3_1:+92462286 | None:intergenic |
AATACATGCCAAGCTATAAC+CGG | 0.409711 | 3_1:+92464867 | None:intergenic |
ACCTTCACCAGCTTGTATTA+CGG | 0.411409 | 3_1:+92458368 | None:intergenic |
CTGGAAGAAGGCTGCCAGTC+AGG | 0.412342 | 3_1:-92458751 | Msa0388150:CDS |
AACTTCTGGTTCATTTGAAA+GGG | 0.417666 | 3_1:-92463741 | Msa0388150:CDS |
CCATCAGGAGGACAGTGTTC+CGG | 0.423188 | 3_1:+92462518 | None:intergenic |
GTGGAAGCAAGGTCTTTGTT+TGG | 0.423730 | 3_1:-92465257 | Msa0388150:CDS |
AAACTTCTGGTTCATTTGAA+AGG | 0.425288 | 3_1:-92463742 | Msa0388150:CDS |
CATATTCCCTTCCGGACAAC+AGG | 0.427773 | 3_1:+92462256 | None:intergenic |
TTGTCATCTGGGCAAGTTGA+CGG | 0.431286 | 3_1:-92463782 | Msa0388150:CDS |
GTTCCGCAAGTGAATAGAAA+TGG | 0.432638 | 3_1:-92467010 | Msa0388150:CDS |
CAATTTGAATGCAGTCCTAC+TGG | 0.434452 | 3_1:-92464811 | Msa0388150:CDS |
TCTCTTGCTTGGATCATTTG+TGG | 0.440008 | 3_1:-92465276 | Msa0388150:CDS |
AGGCTGCCAGTCAGGATGAT+TGG | 0.440039 | 3_1:-92458743 | Msa0388150:CDS |
CGCCGAAGTGTTCTACAGTA+AGG | 0.440525 | 3_1:-92462485 | Msa0388150:CDS |
TGTAGCTTGAACTGCTAATC+CGG | 0.441331 | 3_1:+92464425 | None:intergenic |
TGCAGTTCCCGGTTATAGCT+TGG | 0.442640 | 3_1:-92464875 | Msa0388150:CDS |
CATAACACCTGCTTGAAGCC+TGG | 0.446107 | 3_1:+92458640 | None:intergenic |
TTTGGAGGATTGCTGGAAGA+AGG | 0.446141 | 3_1:-92458763 | Msa0388150:CDS |
TCGTGAAGCCAAAGAAGATC+TGG | 0.446312 | 3_1:+92460937 | None:intergenic |
TGTCATCTGGGCAAGTTGAC+GGG | 0.448348 | 3_1:-92463781 | Msa0388150:CDS |
CATGATTCATACTCGGTTGA+AGG | 0.448802 | 3_1:-92458711 | Msa0388150:CDS |
TGCCGGTGGGAGGACGGTTA+GGG | 0.450217 | 3_1:+92467154 | None:intergenic |
ATTAGCCAGAACCGCTCAAC+TGG | 0.453084 | 3_1:-92462625 | Msa0388150:CDS |
GGTATTGTCAACCTGTTGTC+CGG | 0.455785 | 3_1:-92462267 | Msa0388150:CDS |
GTTCTGGTATGAATGTTTCA+AGG | 0.457355 | 3_1:-92464594 | Msa0388150:CDS |
AGACTTGATTAAATTGTGCT+TGG | 0.458678 | 3_1:-92458871 | Msa0388150:CDS |
CCCAAATCACCGCCTTTGAG+AGG | 0.458983 | 3_1:+92464748 | None:intergenic |
TAGCTTCAAATTCTTTAACT+TGG | 0.459009 | 3_1:+92462014 | None:intergenic |
CCAAGTACGACAGCCTTCTC+TGG | 0.459015 | 3_1:+92464037 | None:intergenic |
CTCATCGTGGCATTTGGATA+AGG | 0.460876 | 3_1:+92463556 | None:intergenic |
CGGCGTTATCTCTGTCCATC+AGG | 0.460893 | 3_1:+92462503 | None:intergenic |
GGGAGGACGGTTAGGGATGG+CGG | 0.462467 | 3_1:+92467161 | None:intergenic |
TCTTCAAAAGTTTGACTTTG+GGG | 0.462931 | 3_1:+92458615 | None:intergenic |
AACAGAGAAAGCAGGAATAT+GGG | 0.469534 | 3_1:-92464065 | Msa0388150:CDS |
GAAAATTAGGGTTTATGGAA+GGG | 0.471446 | 3_1:+92467302 | None:intergenic |
CGAAAATTAGGGTTTATGGA+AGG | 0.471773 | 3_1:+92467301 | None:intergenic |
TGTAGCGTTTCTATGATAAT+GGG | 0.473278 | 3_1:+92464189 | None:intergenic |
AAACTCGGGCAGTTATATAC+TGG | 0.475032 | 3_1:-92465062 | Msa0388150:CDS |
TCCTGTATCATATTTGGTAG+TGG | 0.475564 | 3_1:-92458277 | Msa0388150:three_prime_UTR |
AATGTAGATATTCAGATGTC+AGG | 0.477301 | 3_1:-92462583 | Msa0388150:CDS |
GGACAAAATCTCTGCACCTC+TGG | 0.478166 | 3_1:+92463646 | None:intergenic |
TGGCAAAGATGCTGGTACTC+AGG | 0.478574 | 3_1:-92460128 | Msa0388150:CDS |
CAACACTCCATATTCCCTTC+CGG | 0.479440 | 3_1:+92462248 | None:intergenic |
TACAAGCTGGTGAAGGTTTG+TGG | 0.480060 | 3_1:-92458362 | Msa0388150:three_prime_UTR |
TTGCGTGACAAGCTCCGCTC+AGG | 0.482147 | 3_1:+92464001 | None:intergenic |
TGATAATGATCCGATTAAAC+CGG | 0.482281 | 3_1:-92466978 | Msa0388150:CDS |
GAGCGACGAGATGCACTACT+TGG | 0.483132 | 3_1:-92462049 | Msa0388150:CDS |
TGCGTCTTCTGATGAGTTGG+AGG | 0.483490 | 3_1:-92464995 | Msa0388150:CDS |
AGCCTTATTTAATCCAAAAG+AGG | 0.483806 | 3_1:+92465119 | None:intergenic |
ACAAGAGTACATCTCTTGCT+TGG | 0.484583 | 3_1:-92465287 | Msa0388150:CDS |
CCAAGGAGCGGGAGTGCCGG+TGG | 0.485528 | 3_1:+92467140 | None:intergenic |
TCTGGTTCATTTGAAAGGGA+TGG | 0.487105 | 3_1:-92463737 | Msa0388150:CDS |
GCAGACACGGCAAAGTAAGC+AGG | 0.487480 | 3_1:-92464944 | Msa0388150:CDS |
TCTGATGAGTTGGAGGCTGT+TGG | 0.488026 | 3_1:-92464988 | Msa0388150:CDS |
TGGATTGCAAGCAGATGCTC+TGG | 0.488573 | 3_1:+92462403 | None:intergenic |
TCTCTGAGTTGTTAAGGCTA+GGG | 0.488987 | 3_1:-92461002 | Msa0388150:CDS |
GATGTTGCCAATTACGATAC+TGG | 0.489809 | 3_1:-92465177 | Msa0388150:CDS |
GTAGCTCAAGTGGTGAGCTT+TGG | 0.490479 | 3_1:-92464834 | Msa0388150:CDS |
TGCCGGCAAGCTGATGCTAA+TGG | 0.492102 | 3_1:-92458481 | Msa0388150:CDS |
TCTGTGACTCTTGCGAAATG+AGG | 0.494038 | 3_1:+92458791 | None:intergenic |
ACTCTTGCGAAATGAGGAAC+TGG | 0.494741 | 3_1:+92458797 | None:intergenic |
GTTGAAGACTGTGGCGGGTA+TGG | 0.496540 | 3_1:-92465318 | Msa0388150:CDS |
ACCACTACCAAATATGATAC+AGG | 0.496655 | 3_1:+92458276 | None:intergenic |
ATGCTAATGGCAGTCATGTT+GGG | 0.496865 | 3_1:-92458468 | Msa0388150:CDS |
CCAATTACGATACTGGTAGT+TGG | 0.497318 | 3_1:-92465170 | Msa0388150:CDS |
AAGGGCTAGCTCTGAAGCAT+GGG | 0.498973 | 3_1:-92463906 | Msa0388150:CDS |
TTCAGAAACACTTCATGCAT+TGG | 0.499769 | 3_1:-92460887 | Msa0388150:CDS |
AAGCGAGGTGTCCAAGGAGC+GGG | 0.500560 | 3_1:+92467129 | None:intergenic |
CTTGTCTCAAAGGCAATACC+TGG | 0.500995 | 3_1:+92458583 | None:intergenic |
TGCCGTGTCTGCCTCTTGAA+GGG | 0.501392 | 3_1:+92464955 | None:intergenic |
AGAGTTACTGAGAAATGTTA+TGG | 0.501943 | 3_1:-92461770 | Msa0388150:intron |
AAAGATCTGGCAGGTCAAAA+GGG | 0.502682 | 3_1:-92464523 | Msa0388150:CDS |
GAAAATATTTGAAACGCGAG+AGG | 0.503772 | 3_1:+92467376 | None:intergenic |
GAAGGGCTAGCTCTGAAGCA+TGG | 0.503794 | 3_1:-92463907 | Msa0388150:CDS |
TGAAGAAGGGCCTTCCCCTA+TGG | 0.506426 | 3_1:-92458418 | Msa0388150:CDS |
TCAACATTATGTGCAAGTAA+TGG | 0.507993 | 3_1:+92458152 | None:intergenic |
AATCTGGCCTCTTGATGTGC+AGG | 0.508011 | 3_1:-92464500 | Msa0388150:CDS |
GAGAAGGCTGTCGTACTTGG+AGG | 0.511659 | 3_1:-92464034 | Msa0388150:CDS |
CACCCTTCAAGAGGCAGACA+CGG | 0.511686 | 3_1:-92464957 | Msa0388150:CDS |
CACAAATTACATACTCTGCC+TGG | 0.511920 | 3_1:+92463526 | None:intergenic |
AAACGCCATGTCAAAGACCT+TGG | 0.512278 | 3_1:+92464700 | None:intergenic |
CTCGCTTATCCGTTCTCGCC+AGG | 0.512315 | 3_1:-92467113 | Msa0388150:intron |
CTTCAACCACACTATTCCAT+AGG | 0.512810 | 3_1:+92458402 | None:intergenic |
CTCGATTGAGAATAGATGTC+CGG | 0.512937 | 3_1:+92465039 | None:intergenic |
CGGGAGTGCCGGTGGGAGGA+CGG | 0.513178 | 3_1:+92467148 | None:intergenic |
TGTCCAAGGAGCGGGAGTGC+CGG | 0.513708 | 3_1:+92467137 | None:intergenic |
GCTCGGCATTAAGAAAGATC+TGG | 0.513990 | 3_1:-92464536 | Msa0388150:CDS |
TGAAGGAGTTACCGGAGAAT+CGG | 0.514272 | 3_1:+92467212 | None:intergenic |
TTTCCATTTCTATTCACTTG+CGG | 0.516415 | 3_1:+92467007 | None:intergenic |
GGTAAACTCGTGAGCAACAA+AGG | 0.516732 | 3_1:-92464727 | Msa0388150:CDS |
TGGTAGTTGGTTGGTTTCTG+TGG | 0.517230 | 3_1:-92465157 | Msa0388150:CDS |
TCAACAGCTGGCAAAGATGC+TGG | 0.517959 | 3_1:-92460136 | Msa0388150:intron |
TCTTGCGTCTTCTGATGAGT+TGG | 0.518235 | 3_1:-92464998 | Msa0388150:CDS |
TAATCCTGATTTATATTGCA+TGG | 0.518409 | 3_1:+92464384 | None:intergenic |
TTCCATGAGGCTTCGAATAG+GGG | 0.518706 | 3_1:-92464266 | Msa0388150:CDS |
TGGGACATGATACAGTTAGT+TGG | 0.519549 | 3_1:-92462553 | Msa0388150:CDS |
AAGAGCCGGAGTTCTCGTTA+TGG | 0.519920 | 3_1:-92458842 | Msa0388150:CDS |
GCTAATCCGGTCCTTACAAA+AGG | 0.521429 | 3_1:+92464438 | None:intergenic |
GGACCTTTGACGTGTTTGCA+TGG | 0.522851 | 3_1:-92458821 | Msa0388150:CDS |
GAGGTTCGTCGGAGCGGTGA+AGG | 0.523285 | 3_1:+92467195 | None:intergenic |
CTCCTGAAGGTTTAACACCT+TGG | 0.524267 | 3_1:-92462288 | Msa0388150:CDS |
GGTGAAGTACCTGGCGAGAA+CGG | 0.524272 | 3_1:+92467104 | None:intergenic |
GAAGACTGTGGCGGGTATGG+TGG | 0.525466 | 3_1:-92465315 | Msa0388150:CDS |
CGGAGCGGTGAAGGAGTTAC+CGG | 0.525820 | 3_1:+92467204 | None:intergenic |
CTTCAACCGAGTATGAATCA+TGG | 0.526251 | 3_1:+92458712 | None:intergenic |
TCCCACACTATCCGATTCTC+CGG | 0.526849 | 3_1:-92467223 | Msa0388150:CDS |
ACTTGAAGCTAAGGAACTTG+TGG | 0.527108 | 3_1:-92458916 | Msa0388150:CDS |
GGTGATAACAGAATTGAAGA+AGG | 0.527864 | 3_1:-92458432 | Msa0388150:CDS |
ACAAAAGGTTGCAACGAGAA+TGG | 0.530507 | 3_1:+92464453 | None:intergenic |
GTGGTTCTGGATAGAAGTTA+TGG | 0.530986 | 3_1:-92458258 | Msa0388150:three_prime_UTR |
TTCTCTGAGTTGTTAAGGCT+AGG | 0.532515 | 3_1:-92461003 | Msa0388150:CDS |
GGAGCGGGAGTGCCGGTGGG+AGG | 0.532916 | 3_1:+92467144 | None:intergenic |
AACGCCATGTCAAAGACCTT+GGG | 0.533795 | 3_1:+92464701 | None:intergenic |
CTCTGAGTTGTTAAGGCTAG+GGG | 0.533939 | 3_1:-92461001 | Msa0388150:CDS |
AAGACTGTGGCGGGTATGGT+GGG | 0.533980 | 3_1:-92465314 | Msa0388150:CDS |
CCGGAACACTGTCCTCCTGA+TGG | 0.535421 | 3_1:-92462518 | Msa0388150:CDS |
TTGATTAAATTGTGCTTGGA+AGG | 0.535554 | 3_1:-92458867 | Msa0388150:CDS |
TCTCACTTCACTTGAAGCTA+AGG | 0.537465 | 3_1:-92458925 | Msa0388150:CDS |
GGTGTTAAACCTTCAGGAGG+TGG | 0.537506 | 3_1:+92462292 | None:intergenic |
ATGAGAGTTCGGGATCTACT+GGG | 0.537768 | 3_1:-92461071 | Msa0388150:CDS |
ATCCCTAACCGTCCTCCCAC+CGG | 0.540884 | 3_1:-92467156 | Msa0388150:CDS |
TGTTGTCCAATGTTTAGCTA+AGG | 0.541884 | 3_1:+92463670 | None:intergenic |
TTCAACCACACTATTCCATA+GGG | 0.543155 | 3_1:+92458403 | None:intergenic |
TTGACACCTTAGCTAAACAT+TGG | 0.543697 | 3_1:-92463676 | Msa0388150:CDS |
GATGCTAATGGCAGTCATGT+TGG | 0.545635 | 3_1:-92458469 | Msa0388150:CDS |
CAAGGAGCGGGAGTGCCGGT+GGG | 0.545831 | 3_1:+92467141 | None:intergenic |
GAGCGTGGAGAAGAACATAA+AGG | 0.548302 | 3_1:-92462091 | Msa0388150:CDS |
TTACTGTTCAGATGCAGAGT+TGG | 0.549327 | 3_1:-92462440 | Msa0388150:CDS |
TTTCTAACCGTAATACAAGC+TGG | 0.549959 | 3_1:-92458375 | Msa0388150:three_prime_UTR |
TTGGATCATTTGTGGAAGCA+AGG | 0.550203 | 3_1:-92465268 | Msa0388150:CDS |
ACTTCTCATTTCCCTCTCAA+AGG | 0.551135 | 3_1:-92464760 | Msa0388150:CDS |
CGTGACAAGCTCCGCTCAGG+TGG | 0.552020 | 3_1:+92464004 | None:intergenic |
AGAAGGCTGTCGTACTTGGA+GGG | 0.552682 | 3_1:-92464033 | Msa0388150:CDS |
TTGGGTGGAAACAACGGCCA+TGG | 0.554586 | 3_1:+92463625 | None:intergenic |
CAGAACCGCTCAACTGGTGT+TGG | 0.555320 | 3_1:-92462619 | Msa0388150:CDS |
AGTGAATAGAAATGGAAAAG+AGG | 0.555633 | 3_1:-92467002 | Msa0388150:CDS |
TCTGCAGACGATTATGAAGA+AGG | 0.556184 | 3_1:-92464103 | Msa0388150:CDS |
ACGGATAAGCGAGGTGTCCA+AGG | 0.561397 | 3_1:+92467123 | None:intergenic |
CGATTATGAAGAAGGTGCGT+GGG | 0.561589 | 3_1:-92464095 | Msa0388150:CDS |
TTGTCAACCTGTTGTCCGGA+AGG | 0.562058 | 3_1:-92462263 | Msa0388150:CDS |
GTGCTTGGAAGGTGAAGAGC+CGG | 0.562964 | 3_1:-92458856 | Msa0388150:CDS |
TTACGATACTGGTAGTTGGT+TGG | 0.563110 | 3_1:-92465166 | Msa0388150:CDS |
TTATGGTATCCACCTCCTGA+AGG | 0.563692 | 3_1:-92462301 | Msa0388150:CDS |
ATCTGCAATGATTCAGCTGA+GGG | 0.564377 | 3_1:-92462662 | Msa0388150:CDS |
GACAAAGGGCCGCTTTGAGT+GGG | 0.564949 | 3_1:-92463871 | Msa0388150:CDS |
ATTCATACTCGGTTGAAGGA+TGG | 0.565033 | 3_1:-92458707 | Msa0388150:CDS |
GGTGGGAGGACGGTTAGGGA+TGG | 0.565949 | 3_1:+92467158 | None:intergenic |
ACGGATGCTACAAAGTTATG+TGG | 0.567257 | 3_1:-92461819 | Msa0388150:CDS |
AGACAAAGGGCCGCTTTGAG+TGG | 0.567989 | 3_1:-92463872 | Msa0388150:CDS |
TACCGGAGAATCGGATAGTG+TGG | 0.570173 | 3_1:+92467221 | None:intergenic |
CTATCAATCGCTAAACGACA+CGG | 0.571068 | 3_1:-92461838 | Msa0388150:CDS |
GTCCTACTGGCATTCGTCGA+AGG | 0.572596 | 3_1:-92464798 | Msa0388150:CDS |
TCCATGAGGCTTCGAATAGG+GGG | 0.575458 | 3_1:-92464265 | Msa0388150:CDS |
CACAATAGCCATACCTGCAA+AGG | 0.576216 | 3_1:+92460753 | None:intergenic |
TAACTGTATCATGTCCCAAA+GGG | 0.579314 | 3_1:+92462558 | None:intergenic |
CCAAATCACCGCCTTTGAGA+GGG | 0.580277 | 3_1:+92464749 | None:intergenic |
ATGTAGAGAGTACAAATGAG+AGG | 0.583873 | 3_1:-92464360 | Msa0388150:CDS |
ATGCTCCAAAATAATTTGCA+AGG | 0.584213 | 3_1:+92462696 | None:intergenic |
CGGAAGGGAATATGGAGTGT+TGG | 0.585372 | 3_1:-92462247 | Msa0388150:CDS |
GTTGGAACAGATGCTGAGCT+CGG | 0.586515 | 3_1:-92464553 | Msa0388150:CDS |
AATATGGGTAATACCAGAGA+AGG | 0.586843 | 3_1:-92464050 | Msa0388150:CDS |
GCCCTTGCGTGTAGCTCAAG+TGG | 0.589363 | 3_1:-92464844 | Msa0388150:CDS |
CACCACTTGAGCTACACGCA+AGG | 0.590581 | 3_1:+92464842 | None:intergenic |
AGTTCTTAAATGATACATCA+GGG | 0.591073 | 3_1:-92462210 | Msa0388150:CDS |
TCTTCATAATCGTCTGCAGA+AGG | 0.591747 | 3_1:+92464106 | None:intergenic |
GTAAACTCGTGAGCAACAAA+GGG | 0.592305 | 3_1:-92464726 | Msa0388150:CDS |
GTTGTATTAACAGAGAAAGC+AGG | 0.593102 | 3_1:-92464073 | Msa0388150:CDS |
TATCGTTGAATGAGGTTCGT+CGG | 0.593403 | 3_1:+92467184 | None:intergenic |
GAAGACGCAAGACTAGTGAC+AGG | 0.594711 | 3_1:+92465009 | None:intergenic |
AGTGATAGAAGAGAACGAGC+AGG | 0.594944 | 3_1:-92460836 | Msa0388150:CDS |
ATTATGACGGTTGATCCTGA+TGG | 0.595139 | 3_1:+92464238 | None:intergenic |
GATAGAAGAGAACGAGCAGG+TGG | 0.598077 | 3_1:-92460833 | Msa0388150:CDS |
GGGTTCTGGAGATAGACAAA+GGG | 0.598454 | 3_1:-92463885 | Msa0388150:CDS |
TTTACTCCAATCATCCTGAC+TGG | 0.598474 | 3_1:+92458737 | None:intergenic |
GAGCGGAGCTTGTCACGCAA+AGG | 0.598862 | 3_1:-92463998 | Msa0388150:CDS |
CACTCTGACTAAGATAGTTG+AGG | 0.600324 | 3_1:+92467343 | None:intergenic |
ACCACTTGAGCTACACGCAA+GGG | 0.601339 | 3_1:+92464843 | None:intergenic |
CATGGAGACTTCAACTTTGG+GGG | 0.602383 | 3_1:-92458556 | Msa0388150:CDS |
GGTCCATGCAAACACGTCAA+AGG | 0.602542 | 3_1:+92458818 | None:intergenic |
TAATTGGCAACATCATTGAA+AGG | 0.604334 | 3_1:+92465186 | None:intergenic |
TCATCTACCTGCACATCAAG+AGG | 0.606868 | 3_1:+92464493 | None:intergenic |
ACATGGAGACTTCAACTTTG+GGG | 0.608204 | 3_1:-92458557 | Msa0388150:CDS |
TCGGGCAGTTATATACTGGC+CGG | 0.608317 | 3_1:-92465058 | Msa0388150:CDS |
GGCATTAAGAAAGATCTGGC+AGG | 0.610080 | 3_1:-92464532 | Msa0388150:CDS |
ACCGTAATACAAGCTGGTGA+AGG | 0.611639 | 3_1:-92458369 | Msa0388150:three_prime_UTR |
GAAGGCTGTCGTACTTGGAG+GGG | 0.612106 | 3_1:-92464032 | Msa0388150:CDS |
ACGATTATGAAGAAGGTGCG+TGG | 0.615753 | 3_1:-92464096 | Msa0388150:CDS |
CAAGAGTTGGGTGGAAACAA+CGG | 0.616163 | 3_1:+92463619 | None:intergenic |
CTAACTGTATCATGTCCCAA+AGG | 0.617397 | 3_1:+92462557 | None:intergenic |
TGTCAACCTGTTGTCCGGAA+GGG | 0.618332 | 3_1:-92462262 | Msa0388150:CDS |
ATGCAGTTGAAGACTGTGGC+GGG | 0.619454 | 3_1:-92465323 | Msa0388150:intron |
GTGATAACAGAATTGAAGAA+GGG | 0.620813 | 3_1:-92458431 | Msa0388150:CDS |
ACCGTCATAATATCTGGCGA+TGG | 0.621787 | 3_1:-92464226 | Msa0388150:CDS |
AGATGCTGGTACTCAGGTGA+AGG | 0.622179 | 3_1:-92460122 | Msa0388150:CDS |
ATGAAGTGTTTCTGAAGCAG+AGG | 0.625018 | 3_1:+92460894 | None:intergenic |
GGGGTTCTGGAGATAGACAA+AGG | 0.625032 | 3_1:-92463886 | Msa0388150:CDS |
CCTTCCCCTATGGAATAGTG+TGG | 0.625522 | 3_1:-92458408 | Msa0388150:exon |
AACCTTACTGTAGAACACTT+CGG | 0.625661 | 3_1:+92462483 | None:intergenic |
GTGAGAAAACACCCTTCAAG+AGG | 0.628086 | 3_1:-92464966 | Msa0388150:CDS |
TGGATAAGGCAAGAAAGTGA+AGG | 0.628675 | 3_1:+92463570 | None:intergenic |
AGGATCCAACACCAGTTGAG+CGG | 0.629719 | 3_1:+92462614 | None:intergenic |
TGCTTGCAATCCAGATCCAG+AGG | 0.629889 | 3_1:-92462393 | Msa0388150:CDS |
GATGGCGGTATCGTTGAATG+AGG | 0.630649 | 3_1:+92467176 | None:intergenic |
TCTCATTTCCCTCTCAAAGG+CGG | 0.631329 | 3_1:-92464757 | Msa0388150:CDS |
TAAATTCCATGATTCATACT+CGG | 0.631634 | 3_1:-92458718 | Msa0388150:CDS |
CCACACTATTCCATAGGGGA+AGG | 0.633697 | 3_1:+92458408 | None:intergenic |
GATAGTGTGGGAGGAGTGCG+AGG | 0.634233 | 3_1:+92467234 | None:intergenic |
TGAGCAACAAAGGGTACCCA+AGG | 0.634289 | 3_1:-92464717 | Msa0388150:CDS |
TTTGATTTACCATATGACGC+TGG | 0.634704 | 3_1:-92464154 | Msa0388150:CDS |
ATGCGAAGTAATCTTCATAG+TGG | 0.635647 | 3_1:+92461864 | None:intergenic |
CCATGAGGCTTCGAATAGGG+GGG | 0.635790 | 3_1:-92464264 | Msa0388150:CDS |
GCCTTTGAGACAAGAAAACA+TGG | 0.636118 | 3_1:-92458574 | Msa0388150:CDS |
ACCGGAGAATCGGATAGTGT+GGG | 0.637430 | 3_1:+92467222 | None:intergenic |
AAAATATTTGAAACGCGAGA+GGG | 0.643310 | 3_1:+92467377 | None:intergenic |
AAGGTCCATAACGAGAACTC+CGG | 0.643422 | 3_1:+92458837 | None:intergenic |
TTGAATGAGGTTCGTCGGAG+CGG | 0.646153 | 3_1:+92467189 | None:intergenic |
TATCTGCAATGATTCAGCTG+AGG | 0.646525 | 3_1:-92462663 | Msa0388150:CDS |
TAAGCGAGGTGTCCAAGGAG+CGG | 0.648275 | 3_1:+92467128 | None:intergenic |
GATCTGCACAAGAAGAGACA+AGG | 0.649372 | 3_1:-92463961 | Msa0388150:CDS |
AACACAATTCATAGAAGACG+CGG | 0.651133 | 3_1:+92465221 | None:intergenic |
GGTGAAGGTTGATCGCATTG+AGG | 0.651251 | 3_1:-92460107 | Msa0388150:CDS |
GGAGAATCGGATAGTGTGGG+AGG | 0.652552 | 3_1:+92467225 | None:intergenic |
GATGTGCAGGTAGATGATCA+TGG | 0.655285 | 3_1:-92464487 | Msa0388150:CDS |
TGAGAGTTCGGGATCTACTG+GGG | 0.656881 | 3_1:-92461070 | Msa0388150:CDS |
ACGTGTAATCCCACTCAAAG+CGG | 0.663160 | 3_1:+92463862 | None:intergenic |
CGTTATCTCTGTCCATCAGG+AGG | 0.663434 | 3_1:+92462506 | None:intergenic |
TCCATCGCCAGATATTATGA+CGG | 0.664652 | 3_1:+92464225 | None:intergenic |
ATACATGCCAAGCTATAACC+GGG | 0.665882 | 3_1:+92464868 | None:intergenic |
TTCCTTCGACGAATGCCAGT+AGG | 0.666897 | 3_1:+92464796 | None:intergenic |
CGTGGCATGAATTGAAACAA+TGG | 0.667532 | 3_1:-92458124 | Msa0388150:three_prime_UTR |
ATATGCCTCAAGTAGCACTT+CGG | 0.669536 | 3_1:+92462138 | None:intergenic |
GAGAGTTCGGGATCTACTGG+GGG | 0.671738 | 3_1:-92461069 | Msa0388150:CDS |
CACATAATGTTGAAATGACG+TGG | 0.672088 | 3_1:-92458142 | Msa0388150:three_prime_UTR |
TAAGGCTGCGAAACATGTTG+CGG | 0.672453 | 3_1:-92465103 | Msa0388150:CDS |
GCCTGGAACACAGCTCATCG+TGG | 0.673156 | 3_1:+92463543 | None:intergenic |
GGTACCCAAGGTCTTTGACA+TGG | 0.675599 | 3_1:-92464705 | Msa0388150:CDS |
GGTTGAAGGATGGAGTGATG+AGG | 0.678471 | 3_1:-92458697 | Msa0388150:CDS |
GTTACTGCTAAAATTGAGCG+TGG | 0.678682 | 3_1:-92462106 | Msa0388150:CDS |
TGTGATGCAGTTGAAGACTG+TGG | 0.686077 | 3_1:-92465327 | Msa0388150:intron |
GAGGGGTTGAACCACCTGAG+CGG | 0.691284 | 3_1:-92464015 | Msa0388150:CDS |
ACACAATTCATAGAAGACGC+GGG | 0.696970 | 3_1:+92465222 | None:intergenic |
GCTTGCAATCCAGATCCAGA+GGG | 0.700016 | 3_1:-92462392 | Msa0388150:CDS |
AGGGCTAGCTCTGAAGCATG+GGG | 0.701737 | 3_1:-92463905 | Msa0388150:CDS |
CAAGGTGTTAAACCTTCAGG+AGG | 0.702514 | 3_1:+92462289 | None:intergenic |
CTGGCGAGAACGGATAAGCG+AGG | 0.710964 | 3_1:+92467114 | None:intergenic |
TAGTTGGTGAGAGAGCTCGC+CGG | 0.715308 | 3_1:-92462537 | Msa0388150:CDS |
GATGCAGTTGAAGACTGTGG+CGG | 0.716394 | 3_1:-92465324 | Msa0388150:intron |
AAACATTGGACAACAACCAG+AGG | 0.717936 | 3_1:-92463662 | Msa0388150:CDS |
TCAACCACACTATTCCATAG+GGG | 0.725834 | 3_1:+92458404 | None:intergenic |
ACAACAGGTTGACAATACCA+AGG | 0.729327 | 3_1:+92462271 | None:intergenic |
ACTGACCGAAGTGCTACTTG+AGG | 0.734375 | 3_1:-92462143 | Msa0388150:CDS |
ATGTTGGGTAGTGAGCATAG+TGG | 0.780865 | 3_1:-92458453 | Msa0388150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATCTATTGAATTAATT+AGG | - | chr3_1:92459486-92459505 | Msa0388150:intron | 10.0% |
!!! | TAAATCAAAACATTAAATTT+TGG | + | chr3_1:92461969-92461988 | None:intergenic | 10.0% |
!! | TTCAATTTAGTGAATTAATT+AGG | - | chr3_1:92458587-92458606 | Msa0388150:CDS | 15.0% |
!!! | AATAAGTTGAAAATACTTTA+TGG | - | chr3_1:92459030-92459049 | Msa0388150:intron | 15.0% |
!! | TAATATAAACTTAATTAGAG+AGG | - | chr3_1:92462480-92462499 | Msa0388150:CDS | 15.0% |
!! | TTATTCATTCAATCTAAAAA+AGG | + | chr3_1:92462676-92462695 | None:intergenic | 15.0% |
!! | TAGATTGAATGAATAAATTA+AGG | - | chr3_1:92462680-92462699 | Msa0388150:CDS | 15.0% |
!! | AAATTGAATAATAACCTTAT+AGG | + | chr3_1:92463472-92463491 | None:intergenic | 15.0% |
!! | CTATAAAATACTATAGATAA+GGG | + | chr3_1:92463803-92463822 | None:intergenic | 15.0% |
!! | ACTATAAAATACTATAGATA+AGG | + | chr3_1:92463804-92463823 | None:intergenic | 15.0% |
!!! | TAGTATTTTATAGTATTCTA+AGG | - | chr3_1:92463810-92463829 | Msa0388150:CDS | 15.0% |
!!! | AGTATTTTATAGTATTCTAA+GGG | - | chr3_1:92463811-92463830 | Msa0388150:CDS | 15.0% |
!! | AAATTATTAAGATAGAGAAA+TGG | + | chr3_1:92466204-92466223 | None:intergenic | 15.0% |
!! | TTCTCTATCTTAATAATTTA+AGG | - | chr3_1:92466205-92466224 | Msa0388150:intron | 15.0% |
!! | TACTAAATTCATCAGTTTAT+CGG | - | chr3_1:92458769-92458788 | Msa0388150:CDS | 20.0% |
!! | GTAATTAATTAGTACATGTT+TGG | - | chr3_1:92459084-92459103 | Msa0388150:intron | 20.0% |
!!! | CTTTATTTCATCTTTTATCA+TGG | + | chr3_1:92459359-92459378 | None:intergenic | 20.0% |
!!! | ATAAGCTATTTCTATAACAA+AGG | + | chr3_1:92459929-92459948 | None:intergenic | 20.0% |
!!! | TTTATTACACATTTTGCAAA+TGG | - | chr3_1:92462228-92462247 | Msa0388150:CDS | 20.0% |
!! | TATTCTGTAAATTACTGTAA+TGG | - | chr3_1:92462286-92462305 | Msa0388150:CDS | 20.0% |
!! | ATTCTGTAAATTACTGTAAT+GGG | - | chr3_1:92462287-92462306 | Msa0388150:CDS | 20.0% |
!!! | ATTTTAAAATCTCAAATGAG+AGG | + | chr3_1:92462461-92462480 | None:intergenic | 20.0% |
!!! | ATTATGTTTTTTCAATTGCT+AGG | - | chr3_1:92462736-92462755 | Msa0388150:intron | 20.0% |
!! | AATATCTACATTAGAATTTG+AGG | + | chr3_1:92462869-92462888 | None:intergenic | 20.0% |
!! | AAGGTCTATTAAATGAATAT+TGG | - | chr3_1:92463388-92463407 | Msa0388150:intron | 20.0% |
!! | AGGTCTATTAAATGAATATT+GGG | - | chr3_1:92463389-92463408 | Msa0388150:intron | 20.0% |
!!! | GTATTTTATAGTATTCTAAG+GGG | - | chr3_1:92463812-92463831 | Msa0388150:CDS | 20.0% |
!!! | TATTTTATAGTATTCTAAGG+GGG | - | chr3_1:92463813-92463832 | Msa0388150:CDS | 20.0% |
!!! | CTGTTAATATTTTTTCCATA+TGG | + | chr3_1:92463886-92463905 | None:intergenic | 20.0% |
!!! | AACTTAAAATGACTCTTTTT+AGG | + | chr3_1:92464139-92464158 | None:intergenic | 20.0% |
!!! | CTATTTAAAATTGCTAGTTT+AGG | + | chr3_1:92464172-92464191 | None:intergenic | 20.0% |
!! | AAGAAAATATCTAGATAGAA+GGG | + | chr3_1:92464767-92464786 | None:intergenic | 20.0% |
!! | AAAGAAAATATCTAGATAGA+AGG | + | chr3_1:92464768-92464787 | None:intergenic | 20.0% |
!! | ACTGCAATAATTGATATTAT+CGG | + | chr3_1:92464916-92464935 | None:intergenic | 20.0% |
!! | GATTTAAAAACTAGATCTAA+AGG | + | chr3_1:92465190-92465209 | None:intergenic | 20.0% |
!! | TTTAAATCACCAAAAAAAGA+AGG | - | chr3_1:92465202-92465221 | Msa0388150:CDS | 20.0% |
!! | TTAAATCACCAAAAAAAGAA+GGG | - | chr3_1:92465203-92465222 | Msa0388150:CDS | 20.0% |
!! | TATCATAAATGCACTTTATT+AGG | + | chr3_1:92465286-92465305 | None:intergenic | 20.0% |
!!! | TCTACTATTTTCAATTTCAA+TGG | + | chr3_1:92465485-92465504 | None:intergenic | 20.0% |
!! | GACAAAAAAAAATCACAAAA+GGG | + | chr3_1:92466101-92466120 | None:intergenic | 20.0% |
!!! | TTTTATTAATTCCTGTGTTT+TGG | - | chr3_1:92466280-92466299 | Msa0388150:intron | 20.0% |
!!! | TTAACCATTTTCTTTACTTA+TGG | + | chr3_1:92467251-92467270 | None:intergenic | 20.0% |
!!! | GAATTTCTGATTGATTTGAT+TGG | - | chr3_1:92458411-92458430 | Msa0388150:exon | 25.0% |
! | GGATAAATAGTTTAATGTGA+AGG | - | chr3_1:92458622-92458641 | Msa0388150:CDS | 25.0% |
! | ATCAGTTTATCGGATTAATT+AGG | - | chr3_1:92458779-92458798 | Msa0388150:CDS | 25.0% |
! | AAGTTATCTTAGAGAACTTA+TGG | - | chr3_1:92459006-92459025 | Msa0388150:intron | 25.0% |
!! | CTAATGATATAAGTTTTACG+AGG | - | chr3_1:92459127-92459146 | Msa0388150:intron | 25.0% |
! | AGTTAAATTGTGTTCGTTTA+AGG | - | chr3_1:92459377-92459396 | Msa0388150:intron | 25.0% |
! | TTAAACTGTTTATCCAAACA+AGG | + | chr3_1:92459512-92459531 | None:intergenic | 25.0% |
!!! | ATCACAGTTTTGTATGTATA+AGG | - | chr3_1:92459560-92459579 | Msa0388150:intron | 25.0% |
!! | AGTTAAATTGTTTTCGTGTA+AGG | - | chr3_1:92459609-92459628 | Msa0388150:intron | 25.0% |
!! | GTTAAATTGTTTTCGTGTAA+GGG | - | chr3_1:92459610-92459629 | Msa0388150:intron | 25.0% |
! | AAATAAGTCAATTCAAACAG+GGG | + | chr3_1:92459743-92459762 | None:intergenic | 25.0% |
! | CAAATAAGTCAATTCAAACA+GGG | + | chr3_1:92459744-92459763 | None:intergenic | 25.0% |
! | TCAAATAAGTCAATTCAAAC+AGG | + | chr3_1:92459745-92459764 | None:intergenic | 25.0% |
!!! | GCTGTTTTCATAATCTATAT+TGG | + | chr3_1:92459871-92459890 | None:intergenic | 25.0% |
!! | TCAAAACTATAAGGCATTAA+AGG | + | chr3_1:92460055-92460074 | None:intergenic | 25.0% |
!! | TTTTGTGCAATAGAAAAACT+CGG | - | chr3_1:92460383-92460402 | Msa0388150:intron | 25.0% |
!! | TTTTCCATATCATTCTAGTA+AGG | - | chr3_1:92460780-92460799 | Msa0388150:CDS | 25.0% |
! | TAATCCTGATTTATATTGCA+TGG | + | chr3_1:92461079-92461098 | None:intergenic | 25.0% |
! | TTGGGATTATAACTTCAATA+GGG | + | chr3_1:92461143-92461162 | None:intergenic | 25.0% |
!! | TTTGGGATTATAACTTCAAT+AGG | + | chr3_1:92461144-92461163 | None:intergenic | 25.0% |
!! | TTCAATGAATTTTTGTCATC+TGG | - | chr3_1:92461666-92461685 | Msa0388150:intron | 25.0% |
!! | TCAATGAATTTTTGTCATCT+GGG | - | chr3_1:92461667-92461686 | Msa0388150:intron | 25.0% |
! | AATGGTAAAACAATCATACT+TGG | - | chr3_1:92462246-92462265 | Msa0388150:CDS | 25.0% |
! | ATGGTAAAACAATCATACTT+GGG | - | chr3_1:92462247-92462266 | Msa0388150:CDS | 25.0% |
! | TGTAAAGTTACTATACTGAA+TGG | - | chr3_1:92462353-92462372 | Msa0388150:CDS | 25.0% |
!! | TACTTTTAATCACACTATGA+AGG | + | chr3_1:92462410-92462429 | None:intergenic | 25.0% |
!! | TAGTGTGATTAAAAGTATAG+AGG | - | chr3_1:92462413-92462432 | Msa0388150:CDS | 25.0% |
! | TAAACTTAATTAGAGAGGAA+TGG | - | chr3_1:92462485-92462504 | Msa0388150:CDS | 25.0% |
!!! | TTTGATTTTAGATAAGCATG+TGG | - | chr3_1:92462571-92462590 | Msa0388150:CDS | 25.0% |
! | ATAAGAATGAGAACCATTTA+TGG | - | chr3_1:92463142-92463161 | Msa0388150:intron | 25.0% |
! | AGTTCTTAAATGATACATCA+GGG | - | chr3_1:92463250-92463269 | Msa0388150:intron | 25.0% |
! | TAGCTTCAAATTCTTTAACT+TGG | + | chr3_1:92463449-92463468 | None:intergenic | 25.0% |
! | TATACTCTTAATCAACAACA+TGG | + | chr3_1:92463515-92463534 | None:intergenic | 25.0% |
!!! | CTTCAATTAATTACTTTTGC+AGG | - | chr3_1:92463537-92463556 | Msa0388150:intron | 25.0% |
!! | AAGTAATATTTAAGGAGCAT+TGG | + | chr3_1:92463944-92463963 | None:intergenic | 25.0% |
! | TTGGGTCAAAGTAATATTTA+AGG | + | chr3_1:92463952-92463971 | None:intergenic | 25.0% |
! | TGAAGGTTTAAATGAAAGAA+GGG | + | chr3_1:92464029-92464048 | None:intergenic | 25.0% |
! | ATGAAGGTTTAAATGAAAGA+AGG | + | chr3_1:92464030-92464049 | None:intergenic | 25.0% |
! | TTTCATTTAAACCTTCATGT+TGG | - | chr3_1:92464032-92464051 | Msa0388150:CDS | 25.0% |
! | TTCATTTAAACCTTCATGTT+GGG | - | chr3_1:92464033-92464052 | Msa0388150:CDS | 25.0% |
!! | TTTAAAATTGCTAGTTTAGG+TGG | + | chr3_1:92464169-92464188 | None:intergenic | 25.0% |
! | AGAATACACTTCTTAAAAAC+AGG | + | chr3_1:92464290-92464309 | None:intergenic | 25.0% |
! | GTTAACATGATATAAAGTAG+TGG | + | chr3_1:92465168-92465187 | None:intergenic | 25.0% |
!!! | ATAAAACACCCTTCTTTTTT+TGG | + | chr3_1:92465214-92465233 | None:intergenic | 25.0% |
! | GCATACATATTAGAAAATGA+AGG | + | chr3_1:92465244-92465263 | None:intergenic | 25.0% |
! | TTTGAAGATTCTTAAATTGC+AGG | - | chr3_1:92465380-92465399 | Msa0388150:intron | 25.0% |
! | TTATTGAGTAACAGCTAATT+GGG | + | chr3_1:92465655-92465674 | None:intergenic | 25.0% |
! | TAGGAAATGATTAGATTTAG+AGG | - | chr3_1:92465684-92465703 | Msa0388150:intron | 25.0% |
! | AGGAAATGATTAGATTTAGA+GGG | - | chr3_1:92465685-92465704 | Msa0388150:intron | 25.0% |
! | CAATCTAAACAGTTATTATG+TGG | - | chr3_1:92465802-92465821 | Msa0388150:intron | 25.0% |
! | CGACATATTGTTAGAAAATA+AGG | + | chr3_1:92466023-92466042 | None:intergenic | 25.0% |
! | TATGTCGTGTTCTTATAAAT+TGG | - | chr3_1:92466036-92466055 | Msa0388150:intron | 25.0% |
!! | ACAAAAGGGTCTTATATATA+GGG | + | chr3_1:92466087-92466106 | None:intergenic | 25.0% |
! | GGACAAAAAAAAATCACAAA+AGG | + | chr3_1:92466102-92466121 | None:intergenic | 25.0% |
! | TGGTTCTCTTCATTTAATTA+GGG | + | chr3_1:92466184-92466203 | None:intergenic | 25.0% |
! | ATGGTTCTCTTCATTTAATT+AGG | + | chr3_1:92466185-92466204 | None:intergenic | 25.0% |
! | CAGGAATTAATAAAAGTAGT+TGG | + | chr3_1:92466275-92466294 | None:intergenic | 25.0% |
! | TTAGTGAAAAAGTTATGAAC+AGG | + | chr3_1:92466482-92466501 | None:intergenic | 25.0% |
!!! | AACTTTTTCACTAATACACT+TGG | - | chr3_1:92466488-92466507 | Msa0388150:intron | 25.0% |
! | TAAATTCCATGATTCATACT+CGG | - | chr3_1:92466742-92466761 | Msa0388150:intron | 25.0% |
!! | TTCTTCAAAAGTTTGACTTT+GGG | + | chr3_1:92466849-92466868 | None:intergenic | 25.0% |
!!! | AAAGTCAAACTTTTGAAGAA+GGG | - | chr3_1:92466849-92466868 | Msa0388150:intron | 25.0% |
! | CTTTAATCCTGTATCATATT+TGG | - | chr3_1:92467177-92467196 | Msa0388150:CDS | 25.0% |
!! | ATTTTCTTTACTTATGGTAC+TGG | + | chr3_1:92467245-92467264 | None:intergenic | 25.0% |
! | AGTACCATAAGTAAAGAAAA+TGG | - | chr3_1:92467244-92467263 | Msa0388150:CDS | 25.0% |
! | AAAATATTTGAAACGCGAGA+GGG | + | chr3_1:92458086-92458105 | None:intergenic | 30.0% |
GAAAATTAGGGTTTATGGAA+GGG | + | chr3_1:92458161-92458180 | None:intergenic | 30.0% | |
GATTCGAAAATTAGGGTTTA+TGG | + | chr3_1:92458166-92458185 | None:intergenic | 30.0% | |
!! | CATGACTGATTCGAAAATTA+GGG | + | chr3_1:92458173-92458192 | None:intergenic | 30.0% |
!! | ACATGACTGATTCGAAAATT+AGG | + | chr3_1:92458174-92458193 | None:intergenic | 30.0% |
TTAATTCCGAATTCTGTTTC+TGG | - | chr3_1:92458389-92458408 | Msa0388150:three_prime_UTR | 30.0% | |
GAAATTCCAGAAACAGAATT+CGG | + | chr3_1:92458398-92458417 | None:intergenic | 30.0% | |
!!! | TGATTGGTTTTTGTATGTGT+AGG | - | chr3_1:92458427-92458446 | Msa0388150:CDS | 30.0% |
!!! | GATTGGTTTTTGTATGTGTA+GGG | - | chr3_1:92458428-92458447 | Msa0388150:CDS | 30.0% |
TTTCCATTTCTATTCACTTG+CGG | + | chr3_1:92458456-92458475 | None:intergenic | 30.0% | |
AGTGAATAGAAATGGAAAAG+AGG | - | chr3_1:92458458-92458477 | Msa0388150:CDS | 30.0% | |
! | TGATAATGATCCGATTAAAC+CGG | - | chr3_1:92458482-92458501 | Msa0388150:CDS | 30.0% |
! | GAAACAAAAACCGGTTTAAT+CGG | + | chr3_1:92458495-92458514 | None:intergenic | 30.0% |
TGTTCATCACAAACAACTTT+CGG | + | chr3_1:92458525-92458544 | None:intergenic | 30.0% | |
!! | TGAATTAATTAGGCCTTGTT+TGG | - | chr3_1:92458597-92458616 | Msa0388150:CDS | 30.0% |
ACTATTTATCCAACCAAACA+AGG | + | chr3_1:92458613-92458632 | None:intergenic | 30.0% | |
AGTTAAATTGTTCACTAAGC+TGG | - | chr3_1:92458679-92458698 | Msa0388150:CDS | 30.0% | |
!! | GCTGTTTTCATAATCTAACT+TGG | + | chr3_1:92459227-92459246 | None:intergenic | 30.0% |
!! | TGAATTAATTAGGCCTTGTT+TGG | - | chr3_1:92458597-92458616 | Msa0388150:CDS | 30.0% |
!! | GCTGTTTTCATAATTTATCG+TGG | - | chr3_1:92459637-92459656 | Msa0388150:intron | 30.0% |
ACACACACATCAAAACTATA+AGG | + | chr3_1:92460064-92460083 | None:intergenic | 30.0% | |
TAATTGGCAACATCATTGAA+AGG | + | chr3_1:92460277-92460296 | None:intergenic | 30.0% | |
! | CTCCTCTTTTGGATTAAATA+AGG | - | chr3_1:92460339-92460358 | Msa0388150:intron | 30.0% |
!! | AGCCTTATTTAATCCAAAAG+AGG | + | chr3_1:92460344-92460363 | None:intergenic | 30.0% |
TTTGTGCAATAGAAAAACTC+GGG | - | chr3_1:92460384-92460403 | Msa0388150:intron | 30.0% | |
GATTCCTTACTAGAATGATA+TGG | + | chr3_1:92460787-92460806 | None:intergenic | 30.0% | |
TTGACCATGCAATATAAATC+AGG | - | chr3_1:92461072-92461091 | Msa0388150:CDS | 30.0% | |
!!! | AAGACTTTTTGTTTTCCATG+AGG | - | chr3_1:92461181-92461200 | Msa0388150:intron | 30.0% |
TGTAGCGTTTCTATGATAAT+GGG | + | chr3_1:92461274-92461293 | None:intergenic | 30.0% | |
!! | ACAAGGAATCTTACTTTTAC+TGG | - | chr3_1:92461516-92461535 | Msa0388150:intron | 30.0% |
!! | AAACTTCTGGTTCATTTGAA+AGG | - | chr3_1:92461718-92461737 | Msa0388150:intron | 30.0% |
!! | AACTTCTGGTTCATTTGAAA+GGG | - | chr3_1:92461719-92461738 | Msa0388150:intron | 30.0% |
!! | TAGTTGCTTGTGTTTTAAAC+TGG | - | chr3_1:92462034-92462053 | Msa0388150:CDS | 30.0% |
ATGCGAAACTATAAACATGA+TGG | + | chr3_1:92462065-92462084 | None:intergenic | 30.0% | |
!!! | TTGCTTATTTTTGCTTTCAC+TGG | - | chr3_1:92462319-92462338 | Msa0388150:CDS | 30.0% |
AATGTAGATATTCAGATGTC+AGG | - | chr3_1:92462877-92462896 | Msa0388150:intron | 30.0% | |
GTCAAAGCATGTTCTAATTA+TGG | + | chr3_1:92463121-92463140 | None:intergenic | 30.0% | |
CAGTTCTTAAATGATACATC+AGG | - | chr3_1:92463249-92463268 | Msa0388150:intron | 30.0% | |
! | AGAATTTGAAGCTACCTATA+AGG | - | chr3_1:92463455-92463474 | Msa0388150:intron | 30.0% |
AGAGTTACTGAGAAATGTTA+TGG | - | chr3_1:92463690-92463709 | Msa0388150:CDS | 30.0% | |
TGTGAACAAAAGCAATACAA+AGG | + | chr3_1:92463739-92463758 | None:intergenic | 30.0% | |
ATAAACTCTAGCTATGGAAT+AGG | + | chr3_1:92463910-92463929 | None:intergenic | 30.0% | |
TATTCCATAGCTAGAGTTTA+TGG | - | chr3_1:92463909-92463928 | Msa0388150:CDS | 30.0% | |
GATGGTTTATGGTATCTATT+TGG | - | chr3_1:92464228-92464247 | Msa0388150:CDS | 30.0% | |
AACAATTCTCTGAGTTGTTA+AGG | - | chr3_1:92464452-92464471 | Msa0388150:CDS | 30.0% | |
AATATCTAGATAGAAGGGAA+AGG | + | chr3_1:92464762-92464781 | None:intergenic | 30.0% | |
AGATACTATCGTGAGATTAT+AGG | - | chr3_1:92464795-92464814 | Msa0388150:CDS | 30.0% | |
GAGATAAACTTCAATTGACA+AGG | + | chr3_1:92464834-92464853 | None:intergenic | 30.0% | |
! | GTATTTTATTCCGAGAAAGA+GGG | + | chr3_1:92464856-92464875 | None:intergenic | 30.0% |
!! | TTTCACTTTTGCTTATGGTT+GGG | - | chr3_1:92464960-92464979 | Msa0388150:CDS | 30.0% |
TCAGCACAGAACATATTTAT+GGG | + | chr3_1:92465033-92465052 | None:intergenic | 30.0% | |
CTGCATCTATGAATATTAAG+CGG | + | chr3_1:92465085-92465104 | None:intergenic | 30.0% | |
GTAAGTTAAGTCAATGCTTA+AGG | + | chr3_1:92465124-92465143 | None:intergenic | 30.0% | |
!! | GCAAGTTCACTTTTAAACTT+TGG | + | chr3_1:92465535-92465554 | None:intergenic | 30.0% |
!!! | CTAAAAGCATTTTAGCATCA+AGG | + | chr3_1:92465581-92465600 | None:intergenic | 30.0% |
TCTTCTTTACAAAGTCCTAT+AGG | - | chr3_1:92465614-92465633 | Msa0388150:intron | 30.0% | |
CTTATTGAGTAACAGCTAAT+TGG | + | chr3_1:92465656-92465675 | None:intergenic | 30.0% | |
CAATTAGCTGTTACTCAATA+AGG | - | chr3_1:92465654-92465673 | Msa0388150:intron | 30.0% | |
ATGATTAGATTTAGAGGGTT+AGG | - | chr3_1:92465690-92465709 | Msa0388150:intron | 30.0% | |
CAGTCATTTGCAAAAGAAAT+GGG | - | chr3_1:92465742-92465761 | Msa0388150:intron | 30.0% | |
AGTCATTTGCAAAAGAAATG+GGG | - | chr3_1:92465743-92465762 | Msa0388150:intron | 30.0% | |
AGTCTCACCATTTAAGAAAT+GGG | + | chr3_1:92465940-92465959 | None:intergenic | 30.0% | |
AAGTCTCACCATTTAAGAAA+TGG | + | chr3_1:92465941-92465960 | None:intergenic | 30.0% | |
! | CACAAAAGGGTCTTATATAT+AGG | + | chr3_1:92466088-92466107 | None:intergenic | 30.0% |
! | TGAAAAGGGTCTTATAAGAA+GGG | + | chr3_1:92466123-92466142 | None:intergenic | 30.0% |
! | TTGAAAAGGGTCTTATAAGA+AGG | + | chr3_1:92466124-92466143 | None:intergenic | 30.0% |
! | TGTATCTTGTGAGTTGAAAA+GGG | + | chr3_1:92466137-92466156 | None:intergenic | 30.0% |
! | ATGTATCTTGTGAGTTGAAA+AGG | + | chr3_1:92466138-92466157 | None:intergenic | 30.0% |
! | ATTAGGGGAATTTTTGTGAA+AGG | + | chr3_1:92466168-92466187 | None:intergenic | 30.0% |
GGTTCTCTTCATTTAATTAG+GGG | + | chr3_1:92466183-92466202 | None:intergenic | 30.0% | |
! | CCAAAAGGGTCTTATATATA+GGG | - | chr3_1:92466303-92466322 | Msa0388150:intron | 30.0% |
CACAATTTAATCAAGTCTTC+TGG | + | chr3_1:92466587-92466606 | None:intergenic | 30.0% | |
AGACTTGATTAAATTGTGCT+TGG | - | chr3_1:92466589-92466608 | Msa0388150:intron | 30.0% | |
TTGATTAAATTGTGCTTGGA+AGG | - | chr3_1:92466593-92466612 | Msa0388150:intron | 30.0% | |
!!! | AGTATTTTTCAGGTTCTGTA+CGG | + | chr3_1:92466792-92466811 | None:intergenic | 30.0% |
!! | GGAAAAGTACAGTATTTTTC+AGG | + | chr3_1:92466802-92466821 | None:intergenic | 30.0% |
! | GAAAAATACTGTACTTTTCC+AGG | - | chr3_1:92466802-92466821 | Msa0388150:intron | 30.0% |
! | TCTTCAAAAGTTTGACTTTG+GGG | + | chr3_1:92466848-92466867 | None:intergenic | 30.0% |
! | CTTCTTCAAAAGTTTGACTT+TGG | + | chr3_1:92466850-92466869 | None:intergenic | 30.0% |
!! | CAAAGTCAAACTTTTGAAGA+AGG | - | chr3_1:92466848-92466867 | Msa0388150:intron | 30.0% |
GTGATAACAGAATTGAAGAA+GGG | - | chr3_1:92467029-92467048 | Msa0388150:intron | 30.0% | |
TCAACATTATGTGCAAGTAA+TGG | + | chr3_1:92467311-92467330 | None:intergenic | 30.0% | |
! | GAAAATATTTGAAACGCGAG+AGG | + | chr3_1:92458087-92458106 | None:intergenic | 35.0% |
CGAAAATTAGGGTTTATGGA+AGG | + | chr3_1:92458162-92458181 | None:intergenic | 35.0% | |
! | GAATCAGTCATGTTTTCAAC+TGG | - | chr3_1:92458181-92458200 | Msa0388150:three_prime_UTR | 35.0% |
GGATTGTTCTTCTTCTTCTT+CGG | + | chr3_1:92458208-92458227 | None:intergenic | 35.0% | |
TTCGGAATTAATCAGAGAGA+CGG | + | chr3_1:92458380-92458399 | None:intergenic | 35.0% | |
GGAAACTCAGAAACAAAAAC+CGG | + | chr3_1:92458504-92458523 | None:intergenic | 35.0% | |
!! | TTAATTAGGCCTTGTTTGGT+TGG | - | chr3_1:92458601-92458620 | Msa0388150:CDS | 35.0% |
GTCACAAAACGTATGTATGT+CGG | + | chr3_1:92458838-92458857 | None:intergenic | 35.0% | |
! | TAAGTTTTACGAGGCTGTTT+TGG | - | chr3_1:92459136-92459155 | Msa0388150:intron | 35.0% |
!!! | GCTGTTTTTGTAAGCTCTAT+TGG | - | chr3_1:92459405-92459424 | Msa0388150:intron | 35.0% |
GTTTGGATAAACAGCTTCTT+TGG | + | chr3_1:92459991-92460010 | None:intergenic | 35.0% | |
AAGAAGCTGTTTATCCAAAC+AGG | - | chr3_1:92459991-92460010 | Msa0388150:intron | 35.0% | |
AGAAGCTGTTTATCCAAACA+GGG | - | chr3_1:92459992-92460011 | Msa0388150:intron | 35.0% | |
ATGTTTAATTGAGCCCTGTT+TGG | + | chr3_1:92460008-92460027 | None:intergenic | 35.0% | |
AACACAATTCATAGAAGACG+CGG | + | chr3_1:92460242-92460261 | None:intergenic | 35.0% | |
! | AATTGTGATAGCTCCTCTTT+TGG | - | chr3_1:92460328-92460347 | Msa0388150:intron | 35.0% |
AATACATGCCAAGCTATAAC+CGG | + | chr3_1:92460596-92460615 | None:intergenic | 35.0% | |
! | GGAATCAAATCGACAGTTTT+TGG | - | chr3_1:92460801-92460820 | Msa0388150:CDS | 35.0% |
GTTCTGGTATGAATGTTTCA+AGG | - | chr3_1:92460866-92460885 | Msa0388150:CDS | 35.0% | |
GTATGAATGTTTCAAGGCTT+TGG | - | chr3_1:92460872-92460891 | Msa0388150:CDS | 35.0% | |
! | ATGTAGAGAGTACAAATGAG+AGG | - | chr3_1:92461100-92461119 | Msa0388150:intron | 35.0% |
! | GAGTACAAATGAGAGGATTT+TGG | - | chr3_1:92461107-92461126 | Msa0388150:intron | 35.0% |
!!! | CATCTTCAACTCTAGCTTTT+GGG | + | chr3_1:92461161-92461180 | None:intergenic | 35.0% |
!!! | TCATCTTCAACTCTAGCTTT+TGG | + | chr3_1:92461162-92461181 | None:intergenic | 35.0% |
GTGTAGCGTTTCTATGATAA+TGG | + | chr3_1:92461275-92461294 | None:intergenic | 35.0% | |
! | TTTGATTTACCATATGACGC+TGG | - | chr3_1:92461306-92461325 | Msa0388150:intron | 35.0% |
! | AATACTTTTCCAGCGTCATA+TGG | + | chr3_1:92461318-92461337 | None:intergenic | 35.0% |
GTTGTATTAACAGAGAAAGC+AGG | - | chr3_1:92461387-92461406 | Msa0388150:intron | 35.0% | |
TAACAGAGAAAGCAGGAATA+TGG | - | chr3_1:92461394-92461413 | Msa0388150:intron | 35.0% | |
AACAGAGAAAGCAGGAATAT+GGG | - | chr3_1:92461395-92461414 | Msa0388150:intron | 35.0% | |
AATATGGGTAATACCAGAGA+AGG | - | chr3_1:92461410-92461429 | Msa0388150:intron | 35.0% | |
! | TGGTAATTTTGCTCCAAGAA+GGG | - | chr3_1:92461536-92461555 | Msa0388150:intron | 35.0% |
CTTGAAAAGCTAGAAACTTC+TGG | - | chr3_1:92461705-92461724 | Msa0388150:intron | 35.0% | |
!! | GAGAAACCAATGTTTTTGTG+CGG | - | chr3_1:92461745-92461764 | Msa0388150:intron | 35.0% |
TTGACACCTTAGCTAAACAT+TGG | - | chr3_1:92461784-92461803 | Msa0388150:CDS | 35.0% | |
TGTTGTCCAATGTTTAGCTA+AGG | + | chr3_1:92461793-92461812 | None:intergenic | 35.0% | |
!!! | CTGTTGTTTTTCCAAGAGTT+GGG | + | chr3_1:92461856-92461875 | None:intergenic | 35.0% |
!!! | TCTGTTGTTTTTCCAAGAGT+TGG | + | chr3_1:92461857-92461876 | None:intergenic | 35.0% |
ATATGGTAGTATTGCGAAAG+AGG | + | chr3_1:92462004-92462023 | None:intergenic | 35.0% | |
GCAACTAAGTTAGTTGGATA+TGG | + | chr3_1:92462021-92462040 | None:intergenic | 35.0% | |
ACACAAGCAACTAAGTTAGT+TGG | + | chr3_1:92462027-92462046 | None:intergenic | 35.0% | |
AATCTCAAATGAGAGGCAAA+TGG | + | chr3_1:92462454-92462473 | None:intergenic | 35.0% | |
ACAGACTTGAATGTTGTTGA+TGG | - | chr3_1:92462526-92462545 | Msa0388150:CDS | 35.0% | |
CAGACTTGAATGTTGTTGAT+GGG | - | chr3_1:92462527-92462546 | Msa0388150:CDS | 35.0% | |
AAGCATGTGGATATACATTC+TGG | - | chr3_1:92462584-92462603 | Msa0388150:CDS | 35.0% | |
! | TATACATTCTGGCTGTCATT+AGG | - | chr3_1:92462595-92462614 | Msa0388150:CDS | 35.0% |
TAACTGTATCATGTCCCAAA+GGG | + | chr3_1:92462905-92462924 | None:intergenic | 35.0% | |
AACCTTACTGTAGAACACTT+CGG | + | chr3_1:92462980-92462999 | None:intergenic | 35.0% | |
TAATCAACAACATGGTTGCA+AGG | + | chr3_1:92463507-92463526 | None:intergenic | 35.0% | |
ATGCGAAGTAATCTTCATAG+TGG | + | chr3_1:92463599-92463618 | None:intergenic | 35.0% | |
AATTCATCACTGCAAACATC+TGG | + | chr3_1:92463766-92463785 | None:intergenic | 35.0% | |
! | ATAGTATTCTAAGGGGGAAT+CGG | - | chr3_1:92463819-92463838 | Msa0388150:CDS | 35.0% |
!! | TTCTAAGACTGAAGTCCATA+TGG | - | chr3_1:92463868-92463887 | Msa0388150:CDS | 35.0% |
ACAACCATAAACTCTAGCTA+TGG | + | chr3_1:92463916-92463935 | None:intergenic | 35.0% | |
ATACTTTGCGATTTGTGGTT+GGG | + | chr3_1:92463970-92463989 | None:intergenic | 35.0% | |
AAGAAGGGAGGTAATTTATG+AGG | + | chr3_1:92464014-92464033 | None:intergenic | 35.0% | |
AGGTTTAAATGAAAGAAGGG+AGG | + | chr3_1:92464026-92464045 | None:intergenic | 35.0% | |
! | GGAATGCAGAGTAAAGTTTT+TGG | + | chr3_1:92464074-92464093 | None:intergenic | 35.0% |
!! | TTTTTAGGAGCTGCGTAATA+AGG | + | chr3_1:92464124-92464143 | None:intergenic | 35.0% |
TAATGTTTCGAGGAAGGATT+GGG | + | chr3_1:92464197-92464216 | None:intergenic | 35.0% | |
GGTTTATGGTATCTATTTGG+TGG | - | chr3_1:92464231-92464250 | Msa0388150:CDS | 35.0% | |
!! | AGTATTGATATACTACTCCC+AGG | - | chr3_1:92464314-92464333 | Msa0388150:CDS | 35.0% |
AACCGCAACAACATTATACA+GGG | + | chr3_1:92464359-92464378 | None:intergenic | 35.0% | |
AAACCGCAACAACATTATAC+AGG | + | chr3_1:92464360-92464379 | None:intergenic | 35.0% | |
AAGCAGAGGAAAAATGATGA+AGG | + | chr3_1:92464555-92464574 | None:intergenic | 35.0% | |
TTCAGAAACACTTCATGCAT+TGG | - | chr3_1:92464573-92464592 | Msa0388150:CDS | 35.0% | |
GAAAGGAAACAATCTGCATA+AGG | + | chr3_1:92464745-92464764 | None:intergenic | 35.0% | |
AAGTTTATCTCCCTCTTTCT+CGG | - | chr3_1:92464843-92464862 | Msa0388150:CDS | 35.0% | |
! | GGTATTTTATTCCGAGAAAG+AGG | + | chr3_1:92464857-92464876 | None:intergenic | 35.0% |
ACATGCTATTGATACGAACT+AGG | + | chr3_1:92464878-92464897 | None:intergenic | 35.0% | |
! | TCAATAGCATGTGAGGTTTT+AGG | - | chr3_1:92464886-92464905 | Msa0388150:CDS | 35.0% |
CAATTATTGCAGTCACGTAA+TGG | - | chr3_1:92464923-92464942 | Msa0388150:CDS | 35.0% | |
!!! | TGCTGTTTCACTTTTGCTTA+TGG | - | chr3_1:92464955-92464974 | Msa0388150:CDS | 35.0% |
!! | GTTTCACTTTTGCTTATGGT+TGG | - | chr3_1:92464959-92464978 | Msa0388150:CDS | 35.0% |
ATAAAAATTCCCAAGCTTCG+AGG | + | chr3_1:92465002-92465021 | None:intergenic | 35.0% | |
GTCAGCACAGAACATATTTA+TGG | + | chr3_1:92465034-92465053 | None:intergenic | 35.0% | |
CGTTCTTTGTGCTTAAATCA+TGG | - | chr3_1:92465053-92465072 | Msa0388150:CDS | 35.0% | |
CTATGAATATTAAGCGGCAT+AGG | + | chr3_1:92465079-92465098 | None:intergenic | 35.0% | |
ATTACATTCTCTTCAACAGC+TGG | - | chr3_1:92465312-92465331 | Msa0388150:CDS | 35.0% | |
CTGTTACTCAATAAGGTAGT+TGG | - | chr3_1:92465661-92465680 | Msa0388150:intron | 35.0% | |
TACTCAATAAGGTAGTTGGT+AGG | - | chr3_1:92465665-92465684 | Msa0388150:intron | 35.0% | |
! | CCATTTCTTTTGCAAATGAC+TGG | + | chr3_1:92465744-92465763 | None:intergenic | 35.0% |
CCAGTCATTTGCAAAAGAAA+TGG | - | chr3_1:92465741-92465760 | Msa0388150:intron | 35.0% | |
! | TCCCAAAATTTTCTAAGTGC+TGG | - | chr3_1:92465831-92465850 | Msa0388150:intron | 35.0% |
! | GCCAGCACTTAGAAAATTTT+GGG | + | chr3_1:92465835-92465854 | None:intergenic | 35.0% |
! | TGCCAGCACTTAGAAAATTT+TGG | + | chr3_1:92465836-92465855 | None:intergenic | 35.0% |
TTACCGGATGAAATTCATGT+AGG | - | chr3_1:92465894-92465913 | Msa0388150:intron | 35.0% | |
! | CTCTTTTCAACACTCTCATT+CGG | + | chr3_1:92465975-92465994 | None:intergenic | 35.0% |
!! | AGTGTTGAAAAGAGTGTTTG+AGG | - | chr3_1:92465981-92466000 | Msa0388150:intron | 35.0% |
!! | GTGTTGAAAAGAGTGTTTGA+GGG | - | chr3_1:92465982-92466001 | Msa0388150:intron | 35.0% |
! | AAGGGTCTTATATATAGGGA+GGG | + | chr3_1:92466307-92466326 | None:intergenic | 35.0% |
! | AAAGGGTCTTATATATAGGG+AGG | + | chr3_1:92466306-92466325 | None:intergenic | 35.0% |
! | GCCAAAAGGGTCTTATATAT+AGG | - | chr3_1:92466302-92466321 | Msa0388150:intron | 35.0% |
! | CCCTATATATAAGACCCTTT+TGG | + | chr3_1:92466084-92466103 | None:intergenic | 35.0% |
! | AAGGGTCTTATATATAGGGA+CGG | - | chr3_1:92466307-92466326 | Msa0388150:intron | 35.0% |
CAAAGAAATTGTCTGCCTAA+TGG | - | chr3_1:92466347-92466366 | Msa0388150:intron | 35.0% | |
AAGCAGATACGGATTTCAAA+TGG | + | chr3_1:92466409-92466428 | None:intergenic | 35.0% | |
CTCATGAACTAAAGCAGATA+CGG | + | chr3_1:92466420-92466439 | None:intergenic | 35.0% | |
AAAGCTTATCTATCAGTGCA+TGG | + | chr3_1:92466452-92466471 | None:intergenic | 35.0% | |
! | CAAGAGTCACAGAAAACTTT+TGG | - | chr3_1:92466679-92466698 | Msa0388150:intron | 35.0% |
! | TCCATGTTTTCTTGTCTCAA+AGG | + | chr3_1:92466890-92466909 | None:intergenic | 35.0% |
AAACATGGAGACTTCAACTT+TGG | - | chr3_1:92466901-92466920 | Msa0388150:intron | 35.0% | |
AACATGGAGACTTCAACTTT+GGG | - | chr3_1:92466902-92466921 | Msa0388150:intron | 35.0% | |
GGTGATAACAGAATTGAAGA+AGG | - | chr3_1:92467028-92467047 | Msa0388150:intron | 35.0% | |
TTCAACCACACTATTCCATA+GGG | + | chr3_1:92467060-92467079 | None:intergenic | 35.0% | |
TTTCTAACCGTAATACAAGC+TGG | - | chr3_1:92467085-92467104 | Msa0388150:intron | 35.0% | |
TCCTGTATCATATTTGGTAG+TGG | - | chr3_1:92467183-92467202 | Msa0388150:CDS | 35.0% | |
ACCACTACCAAATATGATAC+AGG | + | chr3_1:92467187-92467206 | None:intergenic | 35.0% | |
!! | ATCATATTTGGTAGTGGTTC+TGG | - | chr3_1:92467189-92467208 | Msa0388150:CDS | 35.0% |
CACATAATGTTGAAATGACG+TGG | - | chr3_1:92467318-92467337 | Msa0388150:five_prime_UTR | 35.0% | |
CACTCTGACTAAGATAGTTG+AGG | + | chr3_1:92458120-92458139 | None:intergenic | 40.0% | |
! | AGGGTTTATGGAAGGGTTTT+TGG | + | chr3_1:92458154-92458173 | None:intergenic | 40.0% |
TATCGTTGAATGAGGTTCGT+CGG | + | chr3_1:92458279-92458298 | None:intergenic | 40.0% | |
GTTCCGCAAGTGAATAGAAA+TGG | - | chr3_1:92458450-92458469 | Msa0388150:CDS | 40.0% | |
TGTATGTCGGTAGATACTCT+TGG | + | chr3_1:92458825-92458844 | None:intergenic | 40.0% | |
! | TACGTTTTGTGACGCTGTTT+CGG | - | chr3_1:92458845-92458864 | Msa0388150:CDS | 40.0% |
! | ACAAGAGTACATCTCTTGCT+TGG | - | chr3_1:92460173-92460192 | Msa0388150:intron | 40.0% |
TCTCTTGCTTGGATCATTTG+TGG | - | chr3_1:92460184-92460203 | Msa0388150:intron | 40.0% | |
TTGGATCATTTGTGGAAGCA+AGG | - | chr3_1:92460192-92460211 | Msa0388150:intron | 40.0% | |
ACACAATTCATAGAAGACGC+GGG | + | chr3_1:92460241-92460260 | None:intergenic | 40.0% | |
GATGTTGCCAATTACGATAC+TGG | - | chr3_1:92460283-92460302 | Msa0388150:intron | 40.0% | |
CCAACTACCAGTATCGTAAT+TGG | + | chr3_1:92460293-92460312 | None:intergenic | 40.0% | |
CCAATTACGATACTGGTAGT+TGG | - | chr3_1:92460290-92460309 | Msa0388150:intron | 40.0% | |
TTACGATACTGGTAGTTGGT+TGG | - | chr3_1:92460294-92460313 | Msa0388150:intron | 40.0% | |
AAACTCGGGCAGTTATATAC+TGG | - | chr3_1:92460398-92460417 | Msa0388150:intron | 40.0% | |
CTCGATTGAGAATAGATGTC+CGG | + | chr3_1:92460424-92460443 | None:intergenic | 40.0% | |
ATACATGCCAAGCTATAACC+GGG | + | chr3_1:92460595-92460614 | None:intergenic | 40.0% | |
CAATTTGAATGCAGTCCTAC+TGG | - | chr3_1:92460649-92460668 | Msa0388150:intron | 40.0% | |
ACTTCTCATTTCCCTCTCAA+AGG | - | chr3_1:92460700-92460719 | Msa0388150:intron | 40.0% | |
GTAAACTCGTGAGCAACAAA+GGG | - | chr3_1:92460734-92460753 | Msa0388150:intron | 40.0% | |
! | TTCAGAGTCGAGTTTAGTTC+TGG | - | chr3_1:92460850-92460869 | Msa0388150:CDS | 40.0% |
CTTTGGTCTCAGGAAATTGT+TGG | - | chr3_1:92460889-92460908 | Msa0388150:CDS | 40.0% | |
AAAGATCTGGCAGGTCAAAA+GGG | - | chr3_1:92460937-92460956 | Msa0388150:CDS | 40.0% | |
ACAAAAGGTTGCAACGAGAA+TGG | + | chr3_1:92461010-92461029 | None:intergenic | 40.0% | |
! | TCTCGTTGCAACCTTTTGTA+AGG | - | chr3_1:92461011-92461030 | Msa0388150:CDS | 40.0% |
! | TTGCAACCTTTTGTAAGGAC+CGG | - | chr3_1:92461016-92461035 | Msa0388150:CDS | 40.0% |
TGTAGCTTGAACTGCTAATC+CGG | + | chr3_1:92461038-92461057 | None:intergenic | 40.0% | |
! | TTTTCCATGAGGCTTCGAAT+AGG | - | chr3_1:92461192-92461211 | Msa0388150:intron | 40.0% |
TTTCCATGAGGCTTCGAATA+GGG | - | chr3_1:92461193-92461212 | Msa0388150:intron | 40.0% | |
ATTATGACGGTTGATCCTGA+TGG | + | chr3_1:92461225-92461244 | None:intergenic | 40.0% | |
GGATCAACCGTCATAATATC+TGG | - | chr3_1:92461228-92461247 | Msa0388150:intron | 40.0% | |
TCCATCGCCAGATATTATGA+CGG | + | chr3_1:92461238-92461257 | None:intergenic | 40.0% | |
TCTTCATAATCGTCTGCAGA+AGG | + | chr3_1:92461357-92461376 | None:intergenic | 40.0% | |
TCTGCAGACGATTATGAAGA+AGG | - | chr3_1:92461357-92461376 | Msa0388150:intron | 40.0% | |
! | CTGGTAATTTTGCTCCAAGA+AGG | - | chr3_1:92461535-92461554 | Msa0388150:intron | 40.0% |
! | TCTGGTTCATTTGAAAGGGA+TGG | - | chr3_1:92461723-92461742 | Msa0388150:intron | 40.0% |
AAACATTGGACAACAACCAG+AGG | - | chr3_1:92461798-92461817 | Msa0388150:CDS | 40.0% | |
!! | TTGTTTTTCCAAGAGTTGGG+TGG | + | chr3_1:92461853-92461872 | None:intergenic | 40.0% |
TGGATAAGGCAAGAAAGTGA+AGG | + | chr3_1:92461893-92461912 | None:intergenic | 40.0% | |
CACAAATTACATACTCTGCC+TGG | + | chr3_1:92461937-92461956 | None:intergenic | 40.0% | |
CAGGCAGAGTATGTAATTTG+TGG | - | chr3_1:92461935-92461954 | Msa0388150:intron | 40.0% | |
TAATCACACTATGAAGGCAG+AGG | + | chr3_1:92462404-92462423 | None:intergenic | 40.0% | |
TATCTGCAATGATTCAGCTG+AGG | - | chr3_1:92462797-92462816 | Msa0388150:intron | 40.0% | |
ATCTGCAATGATTCAGCTGA+GGG | - | chr3_1:92462798-92462817 | Msa0388150:intron | 40.0% | |
CTAACTGTATCATGTCCCAA+AGG | + | chr3_1:92462906-92462925 | None:intergenic | 40.0% | |
TGGGACATGATACAGTTAGT+TGG | - | chr3_1:92462907-92462926 | Msa0388150:intron | 40.0% | |
TTACTGTTCAGATGCAGAGT+TGG | - | chr3_1:92463020-92463039 | Msa0388150:intron | 40.0% | |
! | TACCAAGGTGTTAAACCTTC+AGG | + | chr3_1:92463177-92463196 | None:intergenic | 40.0% |
! | ACAACAGGTTGACAATACCA+AGG | + | chr3_1:92463192-92463211 | None:intergenic | 40.0% |
ATATGCCTCAAGTAGCACTT+CGG | + | chr3_1:92463325-92463344 | None:intergenic | 40.0% | |
GTTACTGCTAAAATTGAGCG+TGG | - | chr3_1:92463354-92463373 | Msa0388150:intron | 40.0% | |
ACAACATGGTTGCAAGGATA+AGG | + | chr3_1:92463501-92463520 | None:intergenic | 40.0% | |
CTATCAATCGCTAAACGACA+CGG | - | chr3_1:92463622-92463641 | Msa0388150:CDS | 40.0% | |
ACGGATGCTACAAAGTTATG+TGG | - | chr3_1:92463641-92463660 | Msa0388150:CDS | 40.0% | |
GATACTTTGCGATTTGTGGT+TGG | + | chr3_1:92463971-92463990 | None:intergenic | 40.0% | |
CGATGATACTTTGCGATTTG+TGG | + | chr3_1:92463975-92463994 | None:intergenic | 40.0% | |
GTATCATCGAATTCACTGAG+CGG | - | chr3_1:92463986-92464005 | Msa0388150:CDS | 40.0% | |
TTTCTGTATTGTGCAGTGGT+GGG | + | chr3_1:92464096-92464115 | None:intergenic | 40.0% | |
! | TTTTCTGTATTGTGCAGTGG+TGG | + | chr3_1:92464097-92464116 | None:intergenic | 40.0% |
ACCACTGCACAATACAGAAA+AGG | - | chr3_1:92464096-92464115 | Msa0388150:CDS | 40.0% | |
CTAATGTTTCGAGGAAGGAT+TGG | + | chr3_1:92464198-92464217 | None:intergenic | 40.0% | |
CAATCCTTCCTCGAAACATT+AGG | - | chr3_1:92464196-92464215 | Msa0388150:CDS | 40.0% | |
TTTGAAGAAAGCAGACACCT+GGG | + | chr3_1:92464334-92464353 | None:intergenic | 40.0% | |
ATTTGAAGAAAGCAGACACC+TGG | + | chr3_1:92464335-92464354 | None:intergenic | 40.0% | |
TCCCCTGTATAATGTTGTTG+CGG | - | chr3_1:92464354-92464373 | Msa0388150:CDS | 40.0% | |
ACCGCAACAACATTATACAG+GGG | + | chr3_1:92464358-92464377 | None:intergenic | 40.0% | |
TTCTCTGAGTTGTTAAGGCT+AGG | - | chr3_1:92464457-92464476 | Msa0388150:CDS | 40.0% | |
TCTCTGAGTTGTTAAGGCTA+GGG | - | chr3_1:92464458-92464477 | Msa0388150:CDS | 40.0% | |
!! | ATGAAGTGTTTCTGAAGCAG+AGG | + | chr3_1:92464569-92464588 | None:intergenic | 40.0% |
GTTCGTATCAATAGCATGTG+AGG | - | chr3_1:92464879-92464898 | Msa0388150:CDS | 40.0% | |
TGCTTATGGTTGGGAATTGT+TGG | - | chr3_1:92464969-92464988 | Msa0388150:CDS | 40.0% | |
TAGTAGACCTATATGAAGCC+TGG | - | chr3_1:92465498-92465517 | Msa0388150:intron | 40.0% | |
ATGAAGTCCAGGCTTCATAT+AGG | + | chr3_1:92465508-92465527 | None:intergenic | 40.0% | |
!! | ACTTTGGCTTTATGAAGTCC+AGG | + | chr3_1:92465519-92465538 | None:intergenic | 40.0% |
TGGGGTTACTTAACACCTAT+AGG | + | chr3_1:92465632-92465651 | None:intergenic | 40.0% | |
TGAGTAACAGCTAATTGGGT+GGG | + | chr3_1:92465651-92465670 | None:intergenic | 40.0% | |
TTGAGTAACAGCTAATTGGG+TGG | + | chr3_1:92465652-92465671 | None:intergenic | 40.0% | |
AGGCTGTGATGTATATGAAG+AGG | - | chr3_1:92465710-92465729 | Msa0388150:intron | 40.0% | |
TGAATTTCATCCGGTAACAG+AGG | + | chr3_1:92465891-92465910 | None:intergenic | 40.0% | |
GGACCTACATGAATTTCATC+CGG | + | chr3_1:92465900-92465919 | None:intergenic | 40.0% | |
TAGGTCCTACCACTTTATGT+GGG | - | chr3_1:92465913-92465932 | Msa0388150:intron | 40.0% | |
TGTGGGACCCATTTCTTAAA+TGG | - | chr3_1:92465930-92465949 | Msa0388150:intron | 40.0% | |
!!! | ATTCCTGTGTTTTGGCCAAA+AGG | - | chr3_1:92466288-92466307 | Msa0388150:intron | 40.0% |
!!! | TTCCTGTGTTTTGGCCAAAA+GGG | - | chr3_1:92466289-92466308 | Msa0388150:intron | 40.0% |
AGATACGGATTTCAAATGGC+AGG | + | chr3_1:92466405-92466424 | None:intergenic | 40.0% | |
TCTCACTTCACTTGAAGCTA+AGG | - | chr3_1:92466535-92466554 | Msa0388150:intron | 40.0% | |
ACTTGAAGCTAAGGAACTTG+TGG | - | chr3_1:92466544-92466563 | Msa0388150:intron | 40.0% | |
! | GAGTCACAGAAAACTTTTGG+AGG | - | chr3_1:92466682-92466701 | Msa0388150:intron | 40.0% |
!! | GAAAACTTTTGGAGGATTGC+TGG | - | chr3_1:92466690-92466709 | Msa0388150:intron | 40.0% |
TTTACTCCAATCATCCTGAC+TGG | + | chr3_1:92466726-92466745 | None:intergenic | 40.0% | |
CTTCAACCGAGTATGAATCA+TGG | + | chr3_1:92466751-92466770 | None:intergenic | 40.0% | |
CATGATTCATACTCGGTTGA+AGG | - | chr3_1:92466749-92466768 | Msa0388150:intron | 40.0% | |
ATTCATACTCGGTTGAAGGA+TGG | - | chr3_1:92466753-92466772 | Msa0388150:intron | 40.0% | |
!! | TTTTGAAGAAGGGTTTGACC+AGG | - | chr3_1:92466859-92466878 | Msa0388150:intron | 40.0% |
!! | GCCTTTGAGACAAGAAAACA+TGG | - | chr3_1:92466886-92466905 | Msa0388150:intron | 40.0% |
ACATGGAGACTTCAACTTTG+GGG | - | chr3_1:92466903-92466922 | Msa0388150:intron | 40.0% | |
! | CACAAAGATTTTCCAGTTGC+CGG | - | chr3_1:92466962-92466981 | Msa0388150:CDS | 40.0% |
ATGCTAATGGCAGTCATGTT+GGG | - | chr3_1:92466992-92467011 | Msa0388150:CDS | 40.0% | |
TCAACCACACTATTCCATAG+GGG | + | chr3_1:92467059-92467078 | None:intergenic | 40.0% | |
CTTCAACCACACTATTCCAT+AGG | + | chr3_1:92467061-92467080 | None:intergenic | 40.0% | |
ACCTTCACCAGCTTGTATTA+CGG | + | chr3_1:92467095-92467114 | None:intergenic | 40.0% | |
!! | GTGGTTCTGGATAGAAGTTA+TGG | - | chr3_1:92467202-92467221 | Msa0388150:CDS | 40.0% |
CGTGGCATGAATTGAAACAA+TGG | - | chr3_1:92467336-92467355 | Msa0388150:five_prime_UTR | 40.0% | |
TGAAGGAGTTACCGGAGAAT+CGG | + | chr3_1:92458251-92458270 | None:intergenic | 45.0% | |
! | ATACGTTTTGCGAGGCTGTT+TGG | - | chr3_1:92459779-92459798 | Msa0388150:intron | 45.0% |
! | TACGTTTTGCGAGGCTGTTT+GGG | - | chr3_1:92459780-92459799 | Msa0388150:intron | 45.0% |
TGTGTGTGTGTGTGTGTGTT+TGG | - | chr3_1:92460085-92460104 | Msa0388150:CDS | 45.0% | |
TGTGATGCAGTTGAAGACTG+TGG | - | chr3_1:92460133-92460152 | Msa0388150:intron | 45.0% | |
GTGGAAGCAAGGTCTTTGTT+TGG | - | chr3_1:92460203-92460222 | Msa0388150:intron | 45.0% | |
!! | TGGTAGTTGGTTGGTTTCTG+TGG | - | chr3_1:92460303-92460322 | Msa0388150:intron | 45.0% |
TAAGGCTGCGAAACATGTTG+CGG | - | chr3_1:92460357-92460376 | Msa0388150:intron | 45.0% | |
TCTTGCGTCTTCTGATGAGT+TGG | - | chr3_1:92460462-92460481 | Msa0388150:intron | 45.0% | |
GTGAGAAAACACCCTTCAAG+AGG | - | chr3_1:92460494-92460513 | Msa0388150:intron | 45.0% | |
TCTCATTTCCCTCTCAAAGG+CGG | - | chr3_1:92460703-92460722 | Msa0388150:intron | 45.0% | |
GGTAAACTCGTGAGCAACAA+AGG | - | chr3_1:92460733-92460752 | Msa0388150:intron | 45.0% | |
AACGCCATGTCAAAGACCTT+GGG | + | chr3_1:92460762-92460781 | None:intergenic | 45.0% | |
AAACGCCATGTCAAAGACCT+TGG | + | chr3_1:92460763-92460782 | None:intergenic | 45.0% | |
! | TGTTTCAAGGCTTTGGTCTC+AGG | - | chr3_1:92460879-92460898 | Msa0388150:CDS | 45.0% |
GCTCGGCATTAAGAAAGATC+TGG | - | chr3_1:92460924-92460943 | Msa0388150:CDS | 45.0% | |
GGCATTAAGAAAGATCTGGC+AGG | - | chr3_1:92460928-92460947 | Msa0388150:CDS | 45.0% | |
GAAAGATCTGGCAGGTCAAA+AGG | - | chr3_1:92460936-92460955 | Msa0388150:CDS | 45.0% | |
TCATCTACCTGCACATCAAG+AGG | + | chr3_1:92460970-92460989 | None:intergenic | 45.0% | |
GATGTGCAGGTAGATGATCA+TGG | - | chr3_1:92460973-92460992 | Msa0388150:CDS | 45.0% | |
GCTAATCCGGTCCTTACAAA+AGG | + | chr3_1:92461025-92461044 | None:intergenic | 45.0% | |
TTCCATGAGGCTTCGAATAG+GGG | - | chr3_1:92461194-92461213 | Msa0388150:intron | 45.0% | |
ACCGTCATAATATCTGGCGA+TGG | - | chr3_1:92461234-92461253 | Msa0388150:intron | 45.0% | |
! | ACGATTATGAAGAAGGTGCG+TGG | - | chr3_1:92461364-92461383 | Msa0388150:intron | 45.0% |
! | CGATTATGAAGAAGGTGCGT+GGG | - | chr3_1:92461365-92461384 | Msa0388150:intron | 45.0% |
GATCTGCACAAGAAGAGACA+AGG | - | chr3_1:92461499-92461518 | Msa0388150:intron | 45.0% | |
!! | GGGTTCTGGAGATAGACAAA+GGG | - | chr3_1:92461575-92461594 | Msa0388150:intron | 45.0% |
ACGTGTAATCCCACTCAAAG+CGG | + | chr3_1:92461601-92461620 | None:intergenic | 45.0% | |
! | TTGTCATCTGGGCAAGTTGA+CGG | - | chr3_1:92461678-92461697 | Msa0388150:intron | 45.0% |
GCTCATCCGCACAAAAACAT+TGG | + | chr3_1:92461754-92461773 | None:intergenic | 45.0% | |
! | AGGTGCAGAGATTTTGTCCA+TGG | - | chr3_1:92461818-92461837 | Msa0388150:CDS | 45.0% |
CAAGAGTTGGGTGGAAACAA+CGG | + | chr3_1:92461844-92461863 | None:intergenic | 45.0% | |
CTCATCGTGGCATTTGGATA+AGG | + | chr3_1:92461907-92461926 | None:intergenic | 45.0% | |
TGGTAGTATTGCGAAAGAGG+TGG | + | chr3_1:92462001-92462020 | None:intergenic | 45.0% | |
! | TTCTGGCTGTCATTAGGTTG+CGG | - | chr3_1:92462601-92462620 | Msa0388150:CDS | 45.0% |
CAGGAGGTGGATACCATAAA+TGG | + | chr3_1:92463158-92463177 | None:intergenic | 45.0% | |
TTATGGTATCCACCTCCTGA+AGG | - | chr3_1:92463159-92463178 | Msa0388150:intron | 45.0% | |
! | CAAGGTGTTAAACCTTCAGG+AGG | + | chr3_1:92463174-92463193 | None:intergenic | 45.0% |
CTCCTGAAGGTTTAACACCT+TGG | - | chr3_1:92463172-92463191 | Msa0388150:intron | 45.0% | |
GGTATTGTCAACCTGTTGTC+CGG | - | chr3_1:92463193-92463212 | Msa0388150:intron | 45.0% | |
CAACACTCCATATTCCCTTC+CGG | + | chr3_1:92463215-92463234 | None:intergenic | 45.0% | |
!! | GTGCTACTTGAGGCATATTC+TGG | - | chr3_1:92463327-92463346 | Msa0388150:intron | 45.0% |
GAGCGTGGAGAAGAACATAA+AGG | - | chr3_1:92463369-92463388 | Msa0388150:intron | 45.0% | |
AGAAGCTCTTCCCAACATGA+AGG | + | chr3_1:92464046-92464065 | None:intergenic | 45.0% | |
TTCTGTATTGTGCAGTGGTG+GGG | + | chr3_1:92464095-92464114 | None:intergenic | 45.0% | |
! | GCCTTTTCTGTATTGTGCAG+TGG | + | chr3_1:92464100-92464119 | None:intergenic | 45.0% |
ACTGCCTAATGTTTCGAGGA+AGG | + | chr3_1:92464203-92464222 | None:intergenic | 45.0% | |
TTCCTCGAAACATTAGGCAG+TGG | - | chr3_1:92464202-92464221 | Msa0388150:CDS | 45.0% | |
TTCCACTGCCTAATGTTTCG+AGG | + | chr3_1:92464207-92464226 | None:intergenic | 45.0% | |
AACATTAGGCAGTGGAACGA+TGG | - | chr3_1:92464210-92464229 | Msa0388150:CDS | 45.0% | |
TTGTGTGCAGCATGAGAGTT+CGG | - | chr3_1:92464378-92464397 | Msa0388150:CDS | 45.0% | |
ATGAGAGTTCGGGATCTACT+GGG | - | chr3_1:92464389-92464408 | Msa0388150:CDS | 45.0% | |
CTCTGAGTTGTTAAGGCTAG+GGG | - | chr3_1:92464459-92464478 | Msa0388150:CDS | 45.0% | |
ACGAAAAAGGACAGCTCTTC+TGG | + | chr3_1:92464493-92464512 | None:intergenic | 45.0% | |
!! | AGAGCTGTCCTTTTTCGTGA+AGG | - | chr3_1:92464495-92464514 | Msa0388150:CDS | 45.0% |
TGGATGCTCCTTCACGAAAA+AGG | + | chr3_1:92464506-92464525 | None:intergenic | 45.0% | |
!! | AGGAGCATCCAGATCTTCTT+TGG | - | chr3_1:92464515-92464534 | Msa0388150:CDS | 45.0% |
TCGTGAAGCCAAAGAAGATC+TGG | + | chr3_1:92464526-92464545 | None:intergenic | 45.0% | |
AGTGATAGAAGAGAACGAGC+AGG | - | chr3_1:92464624-92464643 | Msa0388150:CDS | 45.0% | |
! | TCTAAGATTGCAGCCTTTGC+AGG | - | chr3_1:92464694-92464713 | Msa0388150:CDS | 45.0% |
CACAATAGCCATACCTGCAA+AGG | + | chr3_1:92464710-92464729 | None:intergenic | 45.0% | |
GAGTAACAGCTAATTGGGTG+GGG | + | chr3_1:92465650-92465669 | None:intergenic | 45.0% | |
TCCAACACTTCCTCTGTTAC+CGG | - | chr3_1:92465878-92465897 | Msa0388150:intron | 45.0% | |
GTAGGTCCTACCACTTTATG+TGG | - | chr3_1:92465912-92465931 | Msa0388150:intron | 45.0% | |
GAAATGGGTCCCACATAAAG+TGG | + | chr3_1:92465925-92465944 | None:intergenic | 45.0% | |
! | GGTCTTATATATAGGGAGGG+AGG | + | chr3_1:92466080-92466099 | None:intergenic | 45.0% |
! | GGTCTTATATATAGGGACGG+AGG | - | chr3_1:92466310-92466329 | Msa0388150:intron | 45.0% |
ACGCAACTTCAACTGCCATT+AGG | + | chr3_1:92466365-92466384 | None:intergenic | 45.0% | |
TACGGATTTCAAATGGCAGG+CGG | + | chr3_1:92466402-92466421 | None:intergenic | 45.0% | |
GTTTCATTACTTCCTCCTGC+AGG | + | chr3_1:92466514-92466533 | None:intergenic | 45.0% | |
AAGGTCCATAACGAGAACTC+CGG | + | chr3_1:92466626-92466645 | None:intergenic | 45.0% | |
ACTCTTGCGAAATGAGGAAC+TGG | + | chr3_1:92466666-92466685 | None:intergenic | 45.0% | |
TCTGTGACTCTTGCGAAATG+AGG | + | chr3_1:92466672-92466691 | None:intergenic | 45.0% | |
TTTGGAGGATTGCTGGAAGA+AGG | - | chr3_1:92466697-92466716 | Msa0388150:intron | 45.0% | |
! | TACTTTTCCAGGCTTCAAGC+AGG | - | chr3_1:92466813-92466832 | Msa0388150:intron | 45.0% |
CTTGTCTCAAAGGCAATACC+TGG | + | chr3_1:92466880-92466899 | None:intergenic | 45.0% | |
CATGGAGACTTCAACTTTGG+GGG | - | chr3_1:92466904-92466923 | Msa0388150:intron | 45.0% | |
GATGCTAATGGCAGTCATGT+TGG | - | chr3_1:92466991-92467010 | Msa0388150:CDS | 45.0% | |
ATGTTGGGTAGTGAGCATAG+TGG | - | chr3_1:92467007-92467026 | Msa0388150:CDS | 45.0% | |
ACCGTAATACAAGCTGGTGA+AGG | - | chr3_1:92467091-92467110 | Msa0388150:intron | 45.0% | |
TACAAGCTGGTGAAGGTTTG+TGG | - | chr3_1:92467098-92467117 | Msa0388150:intron | 45.0% | |
!! | ATTATTATTATTATAGTAAT+TGG | - | chr3_1:92462197-92462216 | Msa0388150:CDS | 5.0% |
TCCCACACTATCCGATTCTC+CGG | - | chr3_1:92458237-92458256 | Msa0388150:three_prime_UTR | 50.0% | |
ACCGGAGAATCGGATAGTGT+GGG | + | chr3_1:92458241-92458260 | None:intergenic | 50.0% | |
TACCGGAGAATCGGATAGTG+TGG | + | chr3_1:92458242-92458261 | None:intergenic | 50.0% | |
TTGAATGAGGTTCGTCGGAG+CGG | + | chr3_1:92458274-92458293 | None:intergenic | 50.0% | |
! | GATGGCGGTATCGTTGAATG+AGG | + | chr3_1:92458287-92458306 | None:intergenic | 50.0% |
! | CGGATTAATTAGGCGCTGTC+TGG | - | chr3_1:92458789-92458808 | Msa0388150:CDS | 50.0% |
CCTCGCAAAACGTATGTCAG+TGG | + | chr3_1:92459774-92459793 | None:intergenic | 50.0% | |
! | CCACTGACATACGTTTTGCG+AGG | - | chr3_1:92459771-92459790 | Msa0388150:intron | 50.0% |
GATGCAGTTGAAGACTGTGG+CGG | - | chr3_1:92460136-92460155 | Msa0388150:intron | 50.0% | |
ATGCAGTTGAAGACTGTGGC+GGG | - | chr3_1:92460137-92460156 | Msa0388150:intron | 50.0% | |
TCGGGCAGTTATATACTGGC+CGG | - | chr3_1:92460402-92460421 | Msa0388150:intron | 50.0% | |
GAAGACGCAAGACTAGTGAC+AGG | + | chr3_1:92460454-92460473 | None:intergenic | 50.0% | |
! | TGCGTCTTCTGATGAGTTGG+AGG | - | chr3_1:92460465-92460484 | Msa0388150:intron | 50.0% |
! | TCTGATGAGTTGGAGGCTGT+TGG | - | chr3_1:92460472-92460491 | Msa0388150:intron | 50.0% |
GTGATTGCTTCTGCAGTTCC+CGG | - | chr3_1:92460574-92460593 | Msa0388150:intron | 50.0% | |
TGCAGTTCCCGGTTATAGCT+TGG | - | chr3_1:92460585-92460604 | Msa0388150:intron | 50.0% | |
ACCACTTGAGCTACACGCAA+GGG | + | chr3_1:92460620-92460639 | None:intergenic | 50.0% | |
GTAGCTCAAGTGGTGAGCTT+TGG | - | chr3_1:92460626-92460645 | Msa0388150:intron | 50.0% | |
TTCCTTCGACGAATGCCAGT+AGG | + | chr3_1:92460667-92460686 | None:intergenic | 50.0% | |
! | CCAAATCACCGCCTTTGAGA+GGG | + | chr3_1:92460714-92460733 | None:intergenic | 50.0% |
CCTCTCAAAGGCGGTGATTT+GGG | - | chr3_1:92460712-92460731 | Msa0388150:intron | 50.0% | |
!! | TGAGCAACAAAGGGTACCCA+AGG | - | chr3_1:92460743-92460762 | Msa0388150:intron | 50.0% |
GGTACCCAAGGTCTTTGACA+TGG | - | chr3_1:92460755-92460774 | Msa0388150:intron | 50.0% | |
GTTGGAACAGATGCTGAGCT+CGG | - | chr3_1:92460907-92460926 | Msa0388150:CDS | 50.0% | |
TGGCAGGTCAAAAGGGAATC+TGG | - | chr3_1:92460944-92460963 | Msa0388150:CDS | 50.0% | |
AATCTGGCCTCTTGATGTGC+AGG | - | chr3_1:92460960-92460979 | Msa0388150:CDS | 50.0% | |
TCCATGAGGCTTCGAATAGG+GGG | - | chr3_1:92461195-92461214 | Msa0388150:intron | 50.0% | |
AGAAGGCTGTCGTACTTGGA+GGG | - | chr3_1:92461427-92461446 | Msa0388150:intron | 50.0% | |
!! | AAGGGCTAGCTCTGAAGCAT+GGG | - | chr3_1:92461554-92461573 | Msa0388150:intron | 50.0% |
!! | GGGGTTCTGGAGATAGACAA+AGG | - | chr3_1:92461574-92461593 | Msa0388150:intron | 50.0% |
! | TGTCATCTGGGCAAGTTGAC+GGG | - | chr3_1:92461679-92461698 | Msa0388150:intron | 50.0% |
GGACAAAATCTCTGCACCTC+TGG | + | chr3_1:92461817-92461836 | None:intergenic | 50.0% | |
! | CGTTGTTTCCACCCAACTCT+TGG | - | chr3_1:92461842-92461861 | Msa0388150:CDS | 50.0% |
ACACAGCTCATCGTGGCATT+TGG | + | chr3_1:92461913-92461932 | None:intergenic | 50.0% | |
ATTAGCCAGAACCGCTCAAC+TGG | - | chr3_1:92462835-92462854 | Msa0388150:intron | 50.0% | |
AGGATCCAACACCAGTTGAG+CGG | + | chr3_1:92462849-92462868 | None:intergenic | 50.0% | |
TTCAGATGTCAGGTGCCCTT+TGG | - | chr3_1:92462887-92462906 | Msa0388150:intron | 50.0% | |
TCAGATGTCAGGTGCCCTTT+GGG | - | chr3_1:92462888-92462907 | Msa0388150:intron | 50.0% | |
CGTTATCTCTGTCCATCAGG+AGG | + | chr3_1:92462957-92462976 | None:intergenic | 50.0% | |
! | CGCCGAAGTGTTCTACAGTA+AGG | - | chr3_1:92462975-92462994 | Msa0388150:intron | 50.0% |
TGGATTGCAAGCAGATGCTC+TGG | + | chr3_1:92463060-92463079 | None:intergenic | 50.0% | |
TGCTTGCAATCCAGATCCAG+AGG | - | chr3_1:92463067-92463086 | Msa0388150:intron | 50.0% | |
GCTTGCAATCCAGATCCAGA+GGG | - | chr3_1:92463068-92463087 | Msa0388150:intron | 50.0% | |
GGTGTTAAACCTTCAGGAGG+TGG | + | chr3_1:92463171-92463190 | None:intergenic | 50.0% | |
TTGTCAACCTGTTGTCCGGA+AGG | - | chr3_1:92463197-92463216 | Msa0388150:intron | 50.0% | |
TGTCAACCTGTTGTCCGGAA+GGG | - | chr3_1:92463198-92463217 | Msa0388150:intron | 50.0% | |
CATATTCCCTTCCGGACAAC+AGG | + | chr3_1:92463207-92463226 | None:intergenic | 50.0% | |
CTGTTGTCCGGAAGGGAATA+TGG | - | chr3_1:92463205-92463224 | Msa0388150:intron | 50.0% | |
CGGAAGGGAATATGGAGTGT+TGG | - | chr3_1:92463213-92463232 | Msa0388150:intron | 50.0% | |
!! | ACTGACCGAAGTGCTACTTG+AGG | - | chr3_1:92463317-92463336 | Msa0388150:intron | 50.0% |
GGCAGTGGAACGATGGTTTA+TGG | - | chr3_1:92464217-92464236 | Msa0388150:CDS | 50.0% | |
TGTGTGCAGCATGAGAGTTC+GGG | - | chr3_1:92464379-92464398 | Msa0388150:CDS | 50.0% | |
CATGAGAGTTCGGGATCTAC+TGG | - | chr3_1:92464388-92464407 | Msa0388150:CDS | 50.0% | |
TGAGAGTTCGGGATCTACTG+GGG | - | chr3_1:92464390-92464409 | Msa0388150:CDS | 50.0% | |
GATAGAAGAGAACGAGCAGG+TGG | - | chr3_1:92464627-92464646 | Msa0388150:CDS | 50.0% | |
GATTGCAGCCTTTGCAGGTA+TGG | - | chr3_1:92464699-92464718 | Msa0388150:CDS | 50.0% | |
TGGATCACAACCTCGAAGCT+TGG | - | chr3_1:92464989-92465008 | Msa0388150:CDS | 50.0% | |
GGATCACAACCTCGAAGCTT+GGG | - | chr3_1:92464990-92465009 | Msa0388150:CDS | 50.0% | |
TCAACAGCTGGCAAAGATGC+TGG | - | chr3_1:92465324-92465343 | Msa0388150:intron | 50.0% | |
TGGCAAAGATGCTGGTACTC+AGG | - | chr3_1:92465332-92465351 | Msa0388150:intron | 50.0% | |
AGATGCTGGTACTCAGGTGA+AGG | - | chr3_1:92465338-92465357 | Msa0388150:intron | 50.0% | |
! | GGTGAAGGTTGATCGCATTG+AGG | - | chr3_1:92465353-92465372 | Msa0388150:intron | 50.0% |
GAAATGGGGCTGTCAGACAT+AGG | - | chr3_1:92465757-92465776 | Msa0388150:intron | 50.0% | |
! | TCCGGTAACAGAGGAAGTGT+TGG | + | chr3_1:92465882-92465901 | None:intergenic | 50.0% |
TGGGTCCCACATAAAGTGGT+AGG | + | chr3_1:92465921-92465940 | None:intergenic | 50.0% | |
! | GACCCTTTTGGCCAAAACAC+AGG | + | chr3_1:92466294-92466313 | None:intergenic | 50.0% |
CACTAATACACTTGGCCTGC+AGG | - | chr3_1:92466496-92466515 | Msa0388150:intron | 50.0% | |
TAATACACTTGGCCTGCAGG+AGG | - | chr3_1:92466499-92466518 | Msa0388150:intron | 50.0% | |
AAGAGCCGGAGTTCTCGTTA+TGG | - | chr3_1:92466618-92466637 | Msa0388150:intron | 50.0% | |
GGACCTTTGACGTGTTTGCA+TGG | - | chr3_1:92466639-92466658 | Msa0388150:intron | 50.0% | |
GGTCCATGCAAACACGTCAA+AGG | + | chr3_1:92466645-92466664 | None:intergenic | 50.0% | |
GGTTGAAGGATGGAGTGATG+AGG | - | chr3_1:92466763-92466782 | Msa0388150:intron | 50.0% | |
CATAACACCTGCTTGAAGCC+TGG | + | chr3_1:92466823-92466842 | None:intergenic | 50.0% | |
TGCCATTAGCATCAGCTTGC+CGG | + | chr3_1:92466984-92467003 | None:intergenic | 50.0% | |
CCACACTATTCCATAGGGGA+AGG | + | chr3_1:92467055-92467074 | None:intergenic | 50.0% | |
CCTTCCCCTATGGAATAGTG+TGG | - | chr3_1:92467052-92467071 | Msa0388150:intron | 50.0% | |
GGAGAATCGGATAGTGTGGG+AGG | + | chr3_1:92458238-92458257 | None:intergenic | 55.0% | |
! | TAAGCGAGGTGTCCAAGGAG+CGG | + | chr3_1:92458335-92458354 | None:intergenic | 55.0% |
! | ACGGATAAGCGAGGTGTCCA+AGG | + | chr3_1:92458340-92458359 | None:intergenic | 55.0% |
! | GGTGAAGTACCTGGCGAGAA+CGG | + | chr3_1:92458359-92458378 | None:intergenic | 55.0% |
! | CAGAGAGACGGTGAAGTACC+TGG | + | chr3_1:92458368-92458387 | None:intergenic | 55.0% |
!! | GTTGAAGACTGTGGCGGGTA+TGG | - | chr3_1:92460142-92460161 | Msa0388150:intron | 55.0% |
!! | AAGACTGTGGCGGGTATGGT+GGG | - | chr3_1:92460146-92460165 | Msa0388150:intron | 55.0% |
CACCCTTCAAGAGGCAGACA+CGG | - | chr3_1:92460503-92460522 | Msa0388150:intron | 55.0% | |
TGCCGTGTCTGCCTCTTGAA+GGG | + | chr3_1:92460508-92460527 | None:intergenic | 55.0% | |
TTGCCGTGTCTGCCTCTTGA+AGG | + | chr3_1:92460509-92460528 | None:intergenic | 55.0% | |
GCAGACACGGCAAAGTAAGC+AGG | - | chr3_1:92460516-92460535 | Msa0388150:intron | 55.0% | |
CACCACTTGAGCTACACGCA+AGG | + | chr3_1:92460621-92460640 | None:intergenic | 55.0% | |
GTCCTACTGGCATTCGTCGA+AGG | - | chr3_1:92460662-92460681 | Msa0388150:intron | 55.0% | |
CCCTCTCAAAGGCGGTGATT+TGG | - | chr3_1:92460711-92460730 | Msa0388150:intron | 55.0% | |
CCCAAATCACCGCCTTTGAG+AGG | + | chr3_1:92460715-92460734 | None:intergenic | 55.0% | |
CCATGAGGCTTCGAATAGGG+GGG | - | chr3_1:92461196-92461215 | Msa0388150:intron | 55.0% | |
CCAAGTACGACAGCCTTCTC+TGG | + | chr3_1:92461426-92461445 | None:intergenic | 55.0% | |
CCAGAGAAGGCTGTCGTACT+TGG | - | chr3_1:92461423-92461442 | Msa0388150:intron | 55.0% | |
GAGAAGGCTGTCGTACTTGG+AGG | - | chr3_1:92461426-92461445 | Msa0388150:intron | 55.0% | |
GAAGGCTGTCGTACTTGGAG+GGG | - | chr3_1:92461428-92461447 | Msa0388150:intron | 55.0% | |
GCTTCAGAGCTAGCCCTTCT+TGG | + | chr3_1:92461552-92461571 | None:intergenic | 55.0% | |
!! | GAAGGGCTAGCTCTGAAGCA+TGG | - | chr3_1:92461553-92461572 | Msa0388150:intron | 55.0% |
!! | AGGGCTAGCTCTGAAGCATG+GGG | - | chr3_1:92461555-92461574 | Msa0388150:intron | 55.0% |
!! | AGCTCTGAAGCATGGGGTTC+TGG | - | chr3_1:92461561-92461580 | Msa0388150:intron | 55.0% |
! | AGACAAAGGGCCGCTTTGAG+TGG | - | chr3_1:92461588-92461607 | Msa0388150:intron | 55.0% |
! | GACAAAGGGCCGCTTTGAGT+GGG | - | chr3_1:92461589-92461608 | Msa0388150:intron | 55.0% |
TTGGGTGGAAACAACGGCCA+TGG | + | chr3_1:92461838-92461857 | None:intergenic | 55.0% | |
TGAAGGCAGAGGAGCAGACA+AGG | + | chr3_1:92462393-92462412 | None:intergenic | 55.0% | |
CAACACCAGTTGAGCGGTTC+TGG | + | chr3_1:92462843-92462862 | None:intergenic | 55.0% | |
CAGAACCGCTCAACTGGTGT+TGG | - | chr3_1:92462841-92462860 | Msa0388150:intron | 55.0% | |
!! | TAGTTGGTGAGAGAGCTCGC+CGG | - | chr3_1:92462923-92462942 | Msa0388150:intron | 55.0% |
CCATCAGGAGGACAGTGTTC+CGG | + | chr3_1:92462945-92462964 | None:intergenic | 55.0% | |
CGGCGTTATCTCTGTCCATC+AGG | + | chr3_1:92462960-92462979 | None:intergenic | 55.0% | |
GAGCGACGAGATGCACTACT+TGG | - | chr3_1:92463411-92463430 | Msa0388150:intron | 55.0% | |
GAGAGTTCGGGATCTACTGG+GGG | - | chr3_1:92464391-92464410 | Msa0388150:CDS | 55.0% | |
GTGCTTGGAAGGTGAAGAGC+CGG | - | chr3_1:92466604-92466623 | Msa0388150:intron | 55.0% | |
AGGCTGCCAGTCAGGATGAT+TGG | - | chr3_1:92466717-92466736 | Msa0388150:intron | 55.0% | |
TGCCGGCAAGCTGATGCTAA+TGG | - | chr3_1:92466979-92466998 | Msa0388150:CDS | 55.0% | |
TGAAGAAGGGCCTTCCCCTA+TGG | - | chr3_1:92467042-92467061 | Msa0388150:intron | 55.0% | |
! | GATAGTGTGGGAGGAGTGCG+AGG | + | chr3_1:92458229-92458248 | None:intergenic | 60.0% |
CGGAGCGGTGAAGGAGTTAC+CGG | + | chr3_1:92458259-92458278 | None:intergenic | 60.0% | |
ATCCCTAACCGTCCTCCCAC+CGG | - | chr3_1:92458304-92458323 | Msa0388150:three_prime_UTR | 60.0% | |
! | AAGCGAGGTGTCCAAGGAGC+GGG | + | chr3_1:92458334-92458353 | None:intergenic | 60.0% |
CTGGCGAGAACGGATAAGCG+AGG | + | chr3_1:92458349-92458368 | None:intergenic | 60.0% | |
CTCGCTTATCCGTTCTCGCC+AGG | - | chr3_1:92458347-92458366 | Msa0388150:three_prime_UTR | 60.0% | |
!! | GAAGACTGTGGCGGGTATGG+TGG | - | chr3_1:92460145-92460164 | Msa0388150:intron | 60.0% |
GCCCTTGCGTGTAGCTCAAG+TGG | - | chr3_1:92460616-92460635 | Msa0388150:intron | 60.0% | |
CCCCCCTATTCGAAGCCTCA+TGG | + | chr3_1:92461199-92461218 | None:intergenic | 60.0% | |
CGAATAGGGGGGAAGCCATC+AGG | - | chr3_1:92461207-92461226 | Msa0388150:intron | 60.0% | |
GAGGGGTTGAACCACCTGAG+CGG | - | chr3_1:92461445-92461464 | Msa0388150:intron | 60.0% | |
TTGCGTGACAAGCTCCGCTC+AGG | + | chr3_1:92461462-92461481 | None:intergenic | 60.0% | |
GAGCGGAGCTTGTCACGCAA+AGG | - | chr3_1:92461462-92461481 | Msa0388150:intron | 60.0% | |
GCCACGATGAGCTGTGTTCC+AGG | - | chr3_1:92461916-92461935 | Msa0388150:intron | 60.0% | |
GCCTGGAACACAGCTCATCG+TGG | + | chr3_1:92461920-92461939 | None:intergenic | 60.0% | |
AGGCAGAGGAGCAGACAAGG+TGG | + | chr3_1:92462390-92462409 | None:intergenic | 60.0% | |
CCGGAACACTGTCCTCCTGA+TGG | - | chr3_1:92462942-92462961 | Msa0388150:intron | 60.0% | |
TTGAGAGTTCGCACGCCCTC+TGG | + | chr3_1:92463086-92463105 | None:intergenic | 60.0% | |
CTGGAAGAAGGCTGCCAGTC+AGG | - | chr3_1:92466709-92466728 | Msa0388150:intron | 60.0% | |
AGCATCAGCTTGCCGGCAAC+TGG | + | chr3_1:92466977-92466996 | None:intergenic | 60.0% | |
GAGGTTCGTCGGAGCGGTGA+AGG | + | chr3_1:92458268-92458287 | None:intergenic | 65.0% | |
GGGAGGACGGTTAGGGATGG+CGG | + | chr3_1:92458302-92458321 | None:intergenic | 65.0% | |
GGTGGGAGGACGGTTAGGGA+TGG | + | chr3_1:92458305-92458324 | None:intergenic | 65.0% | |
TGCCGGTGGGAGGACGGTTA+GGG | + | chr3_1:92458309-92458328 | None:intergenic | 65.0% | |
! | TGTCCAAGGAGCGGGAGTGC+CGG | + | chr3_1:92458326-92458345 | None:intergenic | 65.0% |
CGTGACAAGCTCCGCTCAGG+TGG | + | chr3_1:92461459-92461478 | None:intergenic | 65.0% | |
GTTCGCACGCCCTCTGGATC+TGG | + | chr3_1:92463080-92463099 | None:intergenic | 65.0% | |
! | GTGCCGGTGGGAGGACGGTT+AGG | + | chr3_1:92458310-92458329 | None:intergenic | 70.0% |
!! | CAAGGAGCGGGAGTGCCGGT+GGG | + | chr3_1:92458322-92458341 | None:intergenic | 70.0% |
!! | CGGGAGTGCCGGTGGGAGGA+CGG | + | chr3_1:92458315-92458334 | None:intergenic | 75.0% |
!! | CCAAGGAGCGGGAGTGCCGG+TGG | + | chr3_1:92458323-92458342 | None:intergenic | 75.0% |
CCACCGGCACTCCCGCTCCT+TGG | - | chr3_1:92458320-92458339 | Msa0388150:three_prime_UTR | 75.0% | |
!!! | GGAGCGGGAGTGCCGGTGGG+AGG | + | chr3_1:92458319-92458338 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 92458081 | 92467401 | 92458081 | ID=Msa0388150;Name=Msa0388150 |
chr3_1 | mRNA | 92458081 | 92467401 | 92458081 | ID=Msa0388150-mRNA-1;Parent=Msa0388150;Name=Msa0388150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=109|1|1|1|1|1|8|332|1308 |
chr3_1 | exon | 92458081 | 92458964 | 92458081 | ID=Msa0388150-mRNA-1:exon:25975;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92460081 | 92460151 | 92460081 | ID=Msa0388150-mRNA-1:exon:25974;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92460767 | 92461094 | 92460767 | ID=Msa0388150-mRNA-1:exon:25973;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92461771 | 92461923 | 92461771 | ID=Msa0388150-mRNA-1:exon:25972;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92462006 | 92462724 | 92462006 | ID=Msa0388150-mRNA-1:exon:25971;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92463540 | 92465339 | 92463540 | ID=Msa0388150-mRNA-1:exon:25970;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92466909 | 92467033 | 92466909 | ID=Msa0388150-mRNA-1:exon:25969;Parent=Msa0388150-mRNA-1 |
chr3_1 | exon | 92467114 | 92467401 | 92467114 | ID=Msa0388150-mRNA-1:exon:25968;Parent=Msa0388150-mRNA-1 |
chr3_1 | five_prime_UTR | 92467293 | 92467401 | 92467293 | ID=Msa0388150-mRNA-1:five_prime_utr;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92467114 | 92467292 | 92467114 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92466909 | 92467033 | 92466909 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92463540 | 92465339 | 92463540 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92462006 | 92462724 | 92462006 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92461771 | 92461923 | 92461771 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92460767 | 92461094 | 92460767 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92460081 | 92460151 | 92460081 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | CDS | 92458413 | 92458964 | 92458413 | ID=Msa0388150-mRNA-1:cds;Parent=Msa0388150-mRNA-1 |
chr3_1 | three_prime_UTR | 92458081 | 92458412 | 92458081 | ID=Msa0388150-mRNA-1:three_prime_utr;Parent=Msa0388150-mRNA-1 |
Gene Sequence |
Protein sequence |