Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384650 | XP_003617922.1 | 96.907 | 485 | 3 | 1 | 1 | 485 | 1 | 473 | 0.0 | 959 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384650 | sp|Q9ZW34|ENO3_ARATH | 80.165 | 484 | 84 | 1 | 1 | 484 | 1 | 472 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384650 | G7K4W1 | 96.907 | 485 | 3 | 1 | 1 | 485 | 1 | 473 | 0.0 | 959 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1384650 | 0.810291 | 1.240296e-50 | -8.615850e-47 |
| Msa0047070 | Msa1384650 | 0.833824 | 4.271476e-56 | -8.615850e-47 |
| Msa0094130 | Msa1384650 | 0.815570 | 8.639129e-52 | -8.615850e-47 |
| Msa1369150 | Msa1384650 | 0.809536 | 1.802592e-50 | -8.615850e-47 |
| Msa1369550 | Msa1384650 | 0.824393 | 8.272222e-54 | -8.615850e-47 |
| Msa1374040 | Msa1384650 | 0.810948 | 8.941942e-51 | -8.615850e-47 |
| Msa1374060 | Msa1384650 | 0.809430 | 1.899722e-50 | -8.615850e-47 |
| Msa1384650 | Msa1422420 | 0.821721 | 3.472513e-53 | -8.615850e-47 |
| Msa1384650 | Msa1440960 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
| Msa1384650 | Msa1459380 | 0.805643 | 1.209108e-49 | -8.615850e-47 |
| Msa0602880 | Msa1384650 | 0.811190 | 7.925517e-51 | -8.615850e-47 |
| Msa0608320 | Msa1384650 | 0.803312 | 3.702159e-49 | -8.615850e-47 |
| Msa0626450 | Msa1384650 | 0.815094 | 1.102353e-51 | -8.615850e-47 |
| Msa0626490 | Msa1384650 | 0.814252 | 1.693994e-51 | -8.615850e-47 |
| Msa0658240 | Msa1384650 | 0.812699 | 3.718196e-51 | -8.615850e-47 |
| Msa0664600 | Msa1384650 | 0.815352 | 9.659458e-52 | -8.615850e-47 |
| Msa0683740 | Msa1384650 | 0.804361 | 2.241473e-49 | -8.615850e-47 |
| Msa0747330 | Msa1384650 | 0.821599 | 3.705619e-53 | -8.615850e-47 |
| Msa0788420 | Msa1384650 | 0.812296 | 4.554297e-51 | -8.615850e-47 |
| Msa0825530 | Msa1384650 | 0.991073 | 9.387781e-186 | -8.615850e-47 |
| Msa0826570 | Msa1384650 | 0.818238 | 2.175952e-52 | -8.615850e-47 |
| Msa0137880 | Msa1384650 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
| Msa0146260 | Msa1384650 | 0.814352 | 1.609345e-51 | -8.615850e-47 |
| Msa0146280 | Msa1384650 | 0.813254 | 2.809382e-51 | -8.615850e-47 |
| Msa0167520 | Msa1384650 | 0.802396 | 5.724020e-49 | -8.615850e-47 |
| Msa0168500 | Msa1384650 | 0.800432 | 1.445443e-48 | -8.615850e-47 |
| Msa0225460 | Msa1384650 | 0.830975 | 2.169790e-55 | -8.615850e-47 |
| Msa0225680 | Msa1384650 | 0.846518 | 2.066099e-59 | -8.615850e-47 |
| Msa0225750 | Msa1384650 | 0.820603 | 6.286347e-53 | -8.615850e-47 |
| Msa1225700 | Msa1384650 | 0.832386 | 9.735093e-56 | -8.615850e-47 |
| Msa1229500 | Msa1384650 | 0.803087 | 4.120301e-49 | -8.615850e-47 |
| Msa1252190 | Msa1384650 | 0.823230 | 1.549304e-53 | -8.615850e-47 |
| Msa1268670 | Msa1384650 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
| Msa1269480 | Msa1384650 | 0.824878 | 6.359166e-54 | -8.615850e-47 |
| Msa1271990 | Msa1384650 | 0.801679 | 8.034167e-49 | -8.615850e-47 |
| Msa1292830 | Msa1384650 | 0.806191 | 9.273061e-50 | -8.615850e-47 |
| Msa1328640 | Msa1384650 | 0.805074 | 1.591132e-49 | -8.615850e-47 |
| Msa1328710 | Msa1384650 | 0.845831 | 3.177066e-59 | -8.615850e-47 |
| Msa0388150 | Msa1384650 | 0.815020 | 1.145024e-51 | -8.615850e-47 |
| Msa0391320 | Msa1384650 | 0.809748 | 1.623394e-50 | -8.615850e-47 |
| Msa0397150 | Msa1384650 | 0.810703 | 1.010271e-50 | -8.615850e-47 |
| Msa0410500 | Msa1384650 | 0.819922 | 9.006436e-53 | -8.615850e-47 |
| Msa0417880 | Msa1384650 | 0.818830 | 1.597469e-52 | -8.615850e-47 |
| Msa0428150 | Msa1384650 | 0.862443 | 5.048507e-64 | -8.615850e-47 |
| Msa0442830 | Msa1384650 | 0.806633 | 7.482105e-50 | -8.615850e-47 |
| Msa0444070 | Msa1384650 | 0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0462500 | Msa1384650 | 0.862050 | 6.665245e-64 | -8.615850e-47 |
| Msa0468290 | Msa1384650 | 0.808253 | 3.392046e-50 | -8.615850e-47 |
| Msa0475790 | Msa1384650 | 0.804654 | 1.947121e-49 | -8.615850e-47 |
| Msa1021210 | Msa1384650 | 0.826545 | 2.557945e-54 | -8.615850e-47 |
| Msa1029250 | Msa1384650 | 0.837660 | 4.559638e-57 | -8.615850e-47 |
| Msa1059960 | Msa1384650 | 0.844504 | 7.258681e-59 | -8.615850e-47 |
| Msa1068190 | Msa1384650 | 0.810638 | 1.043433e-50 | -8.615850e-47 |
| Msa1096960 | Msa1384650 | 0.807974 | 3.888084e-50 | -8.615850e-47 |
| Msa1105160 | Msa1384650 | 0.837798 | 4.201404e-57 | -8.615850e-47 |
| Msa0255090 | Msa1384650 | 0.848854 | 4.698912e-60 | -8.615850e-47 |
| Msa0259380 | Msa1384650 | 0.848603 | 5.517222e-60 | -8.615850e-47 |
| Msa0267110 | Msa1384650 | 0.816575 | 5.152264e-52 | -8.615850e-47 |
| Msa0294160 | Msa1384650 | 0.847730 | 9.612316e-60 | -8.615850e-47 |
| Msa0314340 | Msa1384650 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
| Msa0318700 | Msa1384650 | 0.850145 | 2.052044e-60 | -8.615850e-47 |
| Msa0348810 | Msa1384650 | 0.814705 | 1.344690e-51 | -8.615850e-47 |
| Msa0349710 | Msa1384650 | 0.830579 | 2.712310e-55 | -8.615850e-47 |
| Msa1111130 | Msa1384650 | 0.821468 | 3.974185e-53 | -8.615850e-47 |
| Msa1113340 | Msa1384650 | 0.814991 | 1.162097e-51 | -8.615850e-47 |
| Msa1183120 | Msa1384650 | 0.816400 | 5.638402e-52 | -8.615850e-47 |
| Msa1199570 | Msa1384650 | 0.841858 | 3.683071e-58 | -8.615850e-47 |
| Msa0532070 | Msa1384650 | 0.824055 | 9.929455e-54 | -8.615850e-47 |
| Msa0546680 | Msa1384650 | 0.808567 | 2.906759e-50 | -8.615850e-47 |
| Msa0547900 | Msa1384650 | 0.808774 | 2.625199e-50 | -8.615850e-47 |
| Msa0562220 | Msa1384650 | 0.800215 | 1.600122e-48 | -8.615850e-47 |
| Msa0569200 | Msa1384650 | 0.823313 | 1.481668e-53 | -8.615850e-47 |
| Msa0576690 | Msa1384650 | 0.803380 | 3.584000e-49 | -8.615850e-47 |
| Msa0576880 | Msa1384650 | 0.806631 | 7.491273e-50 | -8.615850e-47 |
| Msa0846140 | Msa1384650 | 0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa0856050 | Msa1384650 | 0.814504 | 1.489981e-51 | -8.615850e-47 |
| Msa0856910 | Msa1384650 | 0.804013 | 2.647794e-49 | -8.615850e-47 |
| Msa0873220 | Msa1384650 | 0.842650 | 2.272003e-58 | -8.615850e-47 |
| Msa0906610 | Msa1384650 | 0.814607 | 1.413758e-51 | -8.615850e-47 |
| Msa0938480 | Msa1384650 | 0.848452 | 6.074427e-60 | -8.615850e-47 |
| Msa0945110 | Msa1384650 | 0.836922 | 7.044719e-57 | -8.615850e-47 |
| Msa0975640 | Msa1384650 | 0.833386 | 5.493234e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384650 | MtrunA17_Chr5g0447301 | 98.905 | 274 | 3 | 0 | 1 | 274 | 1 | 274 | 0.0 | 557 |
| Msa1384650 | MtrunA17_Chr7g0265741 | 57.778 | 450 | 167 | 8 | 45 | 484 | 2 | 438 | 2.16e-177 | 505 |
| Msa1384650 | MtrunA17_Chr6g0476311 | 58.129 | 449 | 164 | 8 | 47 | 484 | 5 | 440 | 8.76e-177 | 503 |
| Msa1384650 | MtrunA17_Chr2g0307671 | 57.014 | 442 | 175 | 4 | 44 | 484 | 62 | 489 | 4.36e-174 | 498 |
| Msa1384650 | MtrunA17_Chr5g0447311 | 95.495 | 222 | 10 | 0 | 264 | 485 | 8 | 229 | 1.44e-154 | 438 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384650 | AT2G29560.1 | 80.165 | 484 | 84 | 1 | 1 | 484 | 1 | 472 | 0.0 | 809 |
| Msa1384650 | AT2G36530.1 | 57.428 | 451 | 169 | 8 | 45 | 485 | 2 | 439 | 5.98e-176 | 501 |
| Msa1384650 | AT1G74030.1 | 56.954 | 453 | 173 | 6 | 40 | 484 | 37 | 475 | 3.20e-174 | 498 |
| Msa1384650 | AT2G36530.2 | 56.512 | 430 | 164 | 8 | 66 | 485 | 12 | 428 | 7.88e-164 | 470 |
Find 125 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAACACACTGTAAAATTT+TGG | 0.177712 | tig0020668:+61819 | None:intergenic |
| GAGAACGGGGTCGGAGGTTT+TGG | 0.248202 | tig0020668:+71445 | None:intergenic |
| TGAGACCTATCATCATTTAA+AGG | 0.262267 | tig0020668:-67023 | Msa1384650:intron |
| CCTTGACAAAACAGAGAAAA+AGG | 0.305149 | tig0020668:-69389 | Msa1384650:intron |
| GGATCTTCTATTGATACAAT+TGG | 0.313466 | tig0020668:+64115 | None:intergenic |
| TTGTAATGCTCTTCTTCTTA+AGG | 0.320244 | tig0020668:-63365 | Msa1384650:intron |
| GGCTCTGACGGCGGCATTGA+CGG | 0.326530 | tig0020668:+71466 | None:intergenic |
| TGACGGCGTCTTCGAGTTTA+CGG | 0.335239 | tig0020668:+71483 | None:intergenic |
| ACAGGCAAAGGAAGCGCATT+GGG | 0.339363 | tig0020668:-62829 | Msa1384650:CDS |
| TCAAATCTGCTTGCTCCAAT+TGG | 0.357446 | tig0020668:+67067 | None:intergenic |
| CATTTCTACGATCGATTCTT+CGG | 0.368421 | tig0020668:+71541 | None:intergenic |
| TAAGAGATAACAATTTCTTC+AGG | 0.371235 | tig0020668:-61968 | Msa1384650:three_prime_UTR |
| ATCCATTTGACAAGGAAGAT+TGG | 0.376004 | tig0020668:-64096 | Msa1384650:CDS |
| TCCATTGCTGCATGTAAAGC+TGG | 0.377107 | tig0020668:-68456 | Msa1384650:CDS |
| TGAATGATTCTGCAGGTAGT+AGG | 0.386036 | tig0020668:-63445 | Msa1384650:intron |
| GTATGAGGCTGTTGAGTTAC+GGG | 0.389583 | tig0020668:-69542 | Msa1384650:CDS |
| ATCATAACCGGTTCTACTAA+TGG | 0.389720 | tig0020668:+65670 | None:intergenic |
| CAGTTTATGCTGGTGAAGAT+TGG | 0.398772 | tig0020668:-61997 | Msa1384650:CDS |
| TTTCGTGCTTCTGTTCCATC+TGG | 0.400465 | tig0020668:-71213 | Msa1384650:CDS |
| CTATCATAGCATGATCAATC+TGG | 0.408498 | tig0020668:+69413 | None:intergenic |
| AACTGTTTGACTGAGTGTTT+AGG | 0.408642 | tig0020668:-61772 | Msa1384650:three_prime_UTR |
| TCCATTTGACAAGGAAGATT+GGG | 0.410260 | tig0020668:-64095 | Msa1384650:CDS |
| AAATTCTGTCCCGACGTTTG+AGG | 0.413766 | tig0020668:+64289 | None:intergenic |
| GATGATTCATTTCAGGTATG+AGG | 0.417338 | tig0020668:-69557 | Msa1384650:intron |
| AAGCACATCGCTGACCTGTC+TGG | 0.418545 | tig0020668:-68299 | Msa1384650:CDS |
| TCCCAATCTTCCTTGTCAAA+TGG | 0.418960 | tig0020668:+64094 | None:intergenic |
| GGTATGAGGCTGTTGAGTTA+CGG | 0.423365 | tig0020668:-69543 | Msa1384650:CDS |
| TGGCCTCCTTTACAAGATCC+AGG | 0.431446 | tig0020668:+65690 | None:intergenic |
| TTCATAGCTGATTTATCCGT+TGG | 0.433997 | tig0020668:-62765 | Msa1384650:CDS |
| AAAGCTTGCCTGGAGACATT+AGG | 0.436617 | tig0020668:+66717 | None:intergenic |
| AACAGGTAAAAGATATGATC+TGG | 0.438662 | tig0020668:-64323 | Msa1384650:intron |
| GAAATCATGATTCTTCCAAT+TGG | 0.441103 | tig0020668:-67082 | Msa1384650:CDS |
| AAAACATGCTGGAAATAATC+TGG | 0.443130 | tig0020668:-68225 | Msa1384650:CDS |
| AATCACCTTTAAATGATGAT+AGG | 0.445742 | tig0020668:+67018 | None:intergenic |
| GATATTACGATGAAGAGAAC+GGG | 0.448791 | tig0020668:+71431 | None:intergenic |
| TAAAGCTGGGGCTGCTGAAA+AGG | 0.454878 | tig0020668:-68442 | Msa1384650:CDS |
| GATCTTCTATTGATACAATT+GGG | 0.456790 | tig0020668:+64116 | None:intergenic |
| GGTCATTGAAGTGGTCAAAC+AGG | 0.458747 | tig0020668:-62847 | Msa1384650:CDS |
| CTTCGGATTGAGGAAGAGCT+TGG | 0.459854 | tig0020668:-62028 | Msa1384650:CDS |
| CTCAAGCCTTGGAATTTGCC+AGG | 0.463723 | tig0020668:-64056 | Msa1384650:intron |
| GAATGATTCTGCAGGTAGTA+GGG | 0.464232 | tig0020668:-63444 | Msa1384650:intron |
| AAACAGTTGCTAAAATCTAA+TGG | 0.466487 | tig0020668:+61787 | None:intergenic |
| GGGGACAAAGGTGTATATCT+AGG | 0.471083 | tig0020668:-69517 | Msa1384650:CDS |
| ATCAAGTATATCTCAAGCCT+TGG | 0.478687 | tig0020668:-64067 | Msa1384650:CDS |
| CACCAGCTTTAGAGAAGCCC+TGG | 0.479064 | tig0020668:-65708 | Msa1384650:intron |
| AAGGAGGCCATTAGTAGAAC+CGG | 0.479320 | tig0020668:-65677 | Msa1384650:CDS |
| GACGGCGTCTTCGAGTTTAC+GGG | 0.479590 | tig0020668:+71484 | None:intergenic |
| AAAATATCTGAGGCGCTGAT+TGG | 0.482231 | tig0020668:-69457 | Msa1384650:CDS |
| TGGAAATAATCTGGCAATTG+AGG | 0.486178 | tig0020668:-68216 | Msa1384650:intron |
| CCATTGCTGCATGTAAAGCT+GGG | 0.490656 | tig0020668:-68455 | Msa1384650:CDS |
| AAAGCAGGAACAGGAAGCAC+TGG | 0.490991 | tig0020668:+68266 | None:intergenic |
| GATACAGTTACTTCGGATTG+AGG | 0.493277 | tig0020668:-62038 | Msa1384650:intron |
| GGCTGTTGAGTTACGGGATG+GGG | 0.493888 | tig0020668:-69536 | Msa1384650:CDS |
| AAAATCTAATGGCGCAATTG+AGG | 0.496254 | tig0020668:+61798 | None:intergenic |
| ATAACAGTAAAAGCAGGAAC+AGG | 0.498354 | tig0020668:+68257 | None:intergenic |
| CCTCGGTCACAGTTCCAACT+TGG | 0.498921 | tig0020668:+62868 | None:intergenic |
| TACAAATCAACTTCAACAGT+TGG | 0.502701 | tig0020668:+71252 | None:intergenic |
| GCTGTTGGTCAGATTAAAGC+AGG | 0.505927 | tig0020668:-62738 | Msa1384650:CDS |
| ATCTGAGGCGCTGATTGGTA+TGG | 0.509293 | tig0020668:-69452 | Msa1384650:CDS |
| GAAATTTGATACAGTTACTT+CGG | 0.514281 | tig0020668:-62045 | Msa1384650:intron |
| AACTGTAATGTCGGTGAAGA+TGG | 0.515053 | tig0020668:-66750 | Msa1384650:CDS |
| AAGATCGCTCTTGACGTCGC+TGG | 0.516723 | tig0020668:-65638 | Msa1384650:CDS |
| ATTTGATGAAGCACTGCGAA+TGG | 0.517360 | tig0020668:-67050 | Msa1384650:CDS |
| GCTTTGCTCCTAATGTCTCC+AGG | 0.523451 | tig0020668:-66725 | Msa1384650:CDS |
| GTTCCATCTGGAAACTCCAC+TGG | 0.529470 | tig0020668:-71201 | Msa1384650:CDS |
| TTTGATGAAGCACTGCGAAT+GGG | 0.531009 | tig0020668:-67049 | Msa1384650:CDS |
| CGTGAAAGCCTTTCTCAGAA+TGG | 0.532502 | tig0020668:+71693 | None:intergenic |
| TTTAAATCTCCTCAAACGTC+GGG | 0.533243 | tig0020668:-64298 | Msa1384650:CDS |
| TTTATGCTGGTGAAGATTGG+AGG | 0.538769 | tig0020668:-61994 | Msa1384650:CDS |
| AGGTAGGACCATTCTGAGAA+AGG | 0.539368 | tig0020668:-71701 | Msa1384650:five_prime_UTR |
| TTATCCGTTGGCCTTGCTGT+TGG | 0.541949 | tig0020668:-62753 | Msa1384650:CDS |
| AACAGGCAAAGGAAGCGCAT+TGG | 0.543307 | tig0020668:-62830 | Msa1384650:CDS |
| GGAGATCAAGCAGTTTATGC+TGG | 0.544508 | tig0020668:-62007 | Msa1384650:CDS |
| TCACCGACATTACAGTTATG+TGG | 0.549326 | tig0020668:+66756 | None:intergenic |
| TATCATAGCATGATCAATCT+GGG | 0.550616 | tig0020668:+69414 | None:intergenic |
| CTTTAAATCTCCTCAAACGT+CGG | 0.555208 | tig0020668:-64299 | Msa1384650:CDS |
| GTGATCCAGGTCAACCAAGT+TGG | 0.555500 | tig0020668:-62882 | Msa1384650:intron |
| TCTAATCGCTCTCCTCTGCA+AGG | 0.555562 | tig0020668:+62711 | None:intergenic |
| GGCCTCCTTTACAAGATCCA+GGG | 0.557045 | tig0020668:+65691 | None:intergenic |
| AAAGGTGTATATCTAGGAAA+CGG | 0.559992 | tig0020668:-69511 | Msa1384650:CDS |
| TCAATCTGGGACTGCAGTGT+TGG | 0.560963 | tig0020668:+69427 | None:intergenic |
| AGAAGCCCTGGATCTTGTAA+AGG | 0.562004 | tig0020668:-65696 | Msa1384650:CDS |
| ATAATACCTGGCAAATTCCA+AGG | 0.562772 | tig0020668:+64050 | None:intergenic |
| AGGCAAAGGAAGCGCATTGG+GGG | 0.571983 | tig0020668:-62827 | Msa1384650:CDS |
| AGGCTGTTGAGTTACGGGAT+GGG | 0.576344 | tig0020668:-69537 | Msa1384650:CDS |
| AGATATTACGATGAAGAGAA+CGG | 0.576440 | tig0020668:+71430 | None:intergenic |
| TGAAGTGGTCAAACAGGCAA+AGG | 0.579709 | tig0020668:-62841 | Msa1384650:CDS |
| GATGAAGAGAACGGGGTCGG+AGG | 0.585100 | tig0020668:+71439 | None:intergenic |
| CCAAGTTGGAACTGTGACCG+AGG | 0.585510 | tig0020668:-62868 | Msa1384650:CDS |
| ATAAGCGGTGGAAAACATGC+TGG | 0.585973 | tig0020668:-68236 | Msa1384650:CDS |
| ATGCCAGTGGAGTTTCCAGA+TGG | 0.588263 | tig0020668:+71198 | None:intergenic |
| TTTATCAAGATATTCTTGAA+CGG | 0.588908 | tig0020668:+71517 | None:intergenic |
| GAGGCTGTTGAGTTACGGGA+TGG | 0.592923 | tig0020668:-69538 | Msa1384650:CDS |
| CAGGCAAAGGAAGCGCATTG+GGG | 0.596386 | tig0020668:-62828 | Msa1384650:CDS |
| AATGATTCTGCAGGTAGTAG+GGG | 0.598973 | tig0020668:-63443 | Msa1384650:intron |
| TACGATGAAGAGAACGGGGT+CGG | 0.599870 | tig0020668:+71436 | None:intergenic |
| TTTGACCACTTCAATGACCT+CGG | 0.604404 | tig0020668:+62851 | None:intergenic |
| CCCAGCTTTACATGCAGCAA+TGG | 0.606579 | tig0020668:+68455 | None:intergenic |
| TCAGCGATGTGCTTGTAGAG+TGG | 0.606837 | tig0020668:+68308 | None:intergenic |
| GTGGTGACATCTCACAGAAG+TGG | 0.607193 | tig0020668:-62804 | Msa1384650:CDS |
| AAGCAGGAACAGGAAGCACT+GGG | 0.619719 | tig0020668:+68267 | None:intergenic |
| TTGTACAAGGAACTATGTAC+CGG | 0.620708 | tig0020668:-64241 | Msa1384650:intron |
| AGCCCTGGATCTTGTAAAGG+AGG | 0.621208 | tig0020668:-65693 | Msa1384650:CDS |
| GAGTTACGGGATGGGGACAA+AGG | 0.621649 | tig0020668:-69529 | Msa1384650:CDS |
| GAATACGACGACGTTTAACA+AGG | 0.623272 | tig0020668:-71721 | None:intergenic |
| CCGCTTATAACAGTAAAAGC+AGG | 0.623476 | tig0020668:+68251 | None:intergenic |
| AGGCAAATTCTTGATAGTAG+AGG | 0.625871 | tig0020668:-71279 | Msa1384650:CDS |
| CATTGCTGCATGTAAAGCTG+GGG | 0.626891 | tig0020668:-68454 | Msa1384650:CDS |
| CACGCGCTCGGAGATGAGAG+TGG | 0.636109 | tig0020668:+71579 | None:intergenic |
| AAAGCAGGCGCTCCTTGCAG+AGG | 0.636542 | tig0020668:-62723 | Msa1384650:CDS |
| TGTGACCGAGGTCATTGAAG+TGG | 0.639474 | tig0020668:-62856 | Msa1384650:CDS |
| ATTAACATCTTACATGCCAG+TGG | 0.640506 | tig0020668:+71185 | None:intergenic |
| TATAAATGAGAAAATATCTG+AGG | 0.641810 | tig0020668:-69467 | Msa1384650:CDS |
| CTTTAATCTGACCAACAGCA+AGG | 0.642755 | tig0020668:+62742 | None:intergenic |
| TGATGAAATGAATGAGGTCA+AGG | 0.644784 | tig0020668:+71602 | None:intergenic |
| GGCAAAGGAAGCGCATTGGG+GGG | 0.654274 | tig0020668:-62826 | Msa1384650:CDS |
| GGATATGATAGAATTGTACA+AGG | 0.666629 | tig0020668:-64254 | Msa1384650:CDS |
| GAGTGGTGATGAAATGAATG+AGG | 0.671810 | tig0020668:+71596 | None:intergenic |
| ACGACGACGTTTAACAAGGT+AGG | 0.672274 | tig0020668:-71717 | Msa1384650:five_prime_UTR |
| TGATTACGAAAGTAAAAGCG+AGG | 0.674184 | tig0020668:-71299 | Msa1384650:CDS |
| CTGACCAACAGCAAGGCCAA+CGG | 0.676271 | tig0020668:+62749 | None:intergenic |
| AATAGAAGATCCATTTGACA+AGG | 0.686135 | tig0020668:-64104 | Msa1384650:CDS |
| GGGCCACATAACTGTAATGT+CGG | 0.693032 | tig0020668:-66759 | Msa1384650:CDS |
| TGTAATGTCGGTGAAGATGG+TGG | 0.702441 | tig0020668:-66747 | Msa1384650:CDS |
| ATATTACGATGAAGAGAACG+GGG | 0.743082 | tig0020668:+71432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACGAAAAAATAAATTAA+CGG | + | tig0020668:65586-65605 | None:intergenic | 10.0% |
| !!! | TTTTAAATGAATATATGAAA+TGG | - | tig0020668:66769-66788 | Msa1384650:CDS | 10.0% |
| !!! | GTTTAATTTTTAAAAAAGTA+GGG | + | tig0020668:70814-70833 | None:intergenic | 10.0% |
| !!! | AATCTAAAATAGTTTATGTT+TGG | - | tig0020668:62763-62782 | Msa1384650:CDS | 15.0% |
| !! | AGAAAATTACTAATAAAAGA+GGG | - | tig0020668:63078-63097 | Msa1384650:intron | 15.0% |
| !!! | TTGTTCTTTGAAAATTAATT+TGG | - | tig0020668:63287-63306 | Msa1384650:intron | 15.0% |
| !! | TTATTGATCAATTATAGAAT+TGG | - | tig0020668:63816-63835 | Msa1384650:intron | 15.0% |
| !! | GATAAATGTTATAGTAAAAT+TGG | + | tig0020668:64427-64446 | None:intergenic | 15.0% |
| !! | ACATTTATCAATAATAAAGT+TGG | - | tig0020668:64438-64457 | Msa1384650:intron | 15.0% |
| !! | CATTTATCAATAATAAAGTT+GGG | - | tig0020668:64439-64458 | Msa1384650:intron | 15.0% |
| !!! | TTTTCATTTAAAGTTTAATC+TGG | - | tig0020668:65027-65046 | Msa1384650:intron | 15.0% |
| !! | TCTAAAAACAAAAAATTATC+AGG | - | tig0020668:65085-65104 | Msa1384650:intron | 15.0% |
| !! | AAACTAATTATAAAACAACT+TGG | - | tig0020668:65382-65401 | Msa1384650:intron | 15.0% |
| !! | AACTAATTATAAAACAACTT+GGG | - | tig0020668:65383-65402 | Msa1384650:intron | 15.0% |
| !! | AAAACAAAAACTGAAAAAAT+AGG | + | tig0020668:66449-66468 | None:intergenic | 15.0% |
| !! | GAAAAATGTTCAAAATTATA+CGG | - | tig0020668:67225-67244 | Msa1384650:intron | 15.0% |
| !! | AAAAATGTTCAAAATTATAC+GGG | - | tig0020668:67226-67245 | Msa1384650:intron | 15.0% |
| !!! | AATAATTGGTTCATAATAAT+TGG | - | tig0020668:67369-67388 | Msa1384650:intron | 15.0% |
| !!! | TCTAATTTAATATTTTTGAG+TGG | - | tig0020668:67505-67524 | Msa1384650:intron | 15.0% |
| !!! | TAGAAGTAATTATTTTAGAA+TGG | + | tig0020668:67634-67653 | None:intergenic | 15.0% |
| !! | AAAAAAATAAATATGCAGTA+AGG | + | tig0020668:69255-69274 | None:intergenic | 15.0% |
| !!! | TTGAAAAGTTAACATTTTAT+TGG | - | tig0020668:69394-69413 | Msa1384650:CDS | 15.0% |
| !!! | TTCTTTTATGCTATTATTAT+TGG | - | tig0020668:69492-69511 | Msa1384650:CDS | 15.0% |
| !! | AGCATTTATATGATAAAAAA+TGG | + | tig0020668:70173-70192 | None:intergenic | 15.0% |
| !!! | GGTTTAATTTTTAAAAAAGT+AGG | + | tig0020668:70815-70834 | None:intergenic | 15.0% |
| !! | TCATAAATAAAAAATGAACA+TGG | - | tig0020668:71196-71215 | Msa1384650:intron | 15.0% |
| !! | TTTATCAAGATATTCTTGAA+CGG | + | tig0020668:61904-61923 | None:intergenic | 20.0% |
| !! | ATAAGAAAACTACAAACTAT+AGG | - | tig0020668:62517-62536 | Msa1384650:intron | 20.0% |
| !!! | TATTATGGTTTAATTGATTC+TGG | + | tig0020668:62603-62622 | None:intergenic | 20.0% |
| !! | AATTAAACCATAATAACTAG+CGG | - | tig0020668:62608-62627 | Msa1384650:intron | 20.0% |
| !!! | GTCTATTATATTAGTCATTT+TGG | - | tig0020668:62988-63007 | Msa1384650:intron | 20.0% |
| !! | CAGAAAATTACTAATAAAAG+AGG | - | tig0020668:63077-63096 | Msa1384650:intron | 20.0% |
| !!! | ACAATTATTTTTGTTCATGA+AGG | + | tig0020668:63155-63174 | None:intergenic | 20.0% |
| !! | TATAAATGAGAAAATATCTG+AGG | - | tig0020668:63951-63970 | Msa1384650:intron | 20.0% |
| !! | TTATTGTTCATAACATATGT+AGG | + | tig0020668:64806-64825 | None:intergenic | 20.0% |
| !! | ACTAATTATAAAACAACTTG+GGG | - | tig0020668:65384-65403 | Msa1384650:intron | 20.0% |
| !! | AAGATAATAATGAGGTTATT+TGG | + | tig0020668:65800-65819 | None:intergenic | 20.0% |
| !! | AACATAATCAATTTCAACAA+GGG | + | tig0020668:66195-66214 | None:intergenic | 20.0% |
| !! | ATAGTAACTATACTTATTGA+TGG | + | tig0020668:66235-66254 | None:intergenic | 20.0% |
| !!! | ATAAATCTGTTTTAGAAGAA+AGG | - | tig0020668:66794-66813 | Msa1384650:intron | 20.0% |
| !!! | GTAGGGTATTTTTTAAATTA+AGG | - | tig0020668:67168-67187 | Msa1384650:intron | 20.0% |
| !! | TAAAATTACAAAAAAAGGCA+TGG | - | tig0020668:67311-67330 | Msa1384650:intron | 20.0% |
| !!! | AAAATGATGTTTATAATGGA+AGG | + | tig0020668:68026-68045 | None:intergenic | 20.0% |
| !! | AGAGAAAATGATGTTTATAA+TGG | + | tig0020668:68030-68049 | None:intergenic | 20.0% |
| !! | AGAGTTTATTATAGAAAAAG+AGG | - | tig0020668:68139-68158 | Msa1384650:intron | 20.0% |
| !! | AAAGGTAAGAAAATAATTGA+AGG | - | tig0020668:68778-68797 | Msa1384650:intron | 20.0% |
| !! | CGAGTCATTAATTAATTTAA+TGG | - | tig0020668:68909-68928 | Msa1384650:intron | 20.0% |
| !! | GAGGTTGTTATAAATTATTT+AGG | - | tig0020668:69229-69248 | Msa1384650:intron | 20.0% |
| !!! | ACTTTTCAATAAATAATACC+TGG | + | tig0020668:69383-69402 | None:intergenic | 20.0% |
| !! | GTAACATTAAACTTTGAATT+TGG | - | tig0020668:69603-69622 | Msa1384650:intron | 20.0% |
| !!! | TTTTTAAGTGTCGATTTTTT+AGG | + | tig0020668:69652-69671 | None:intergenic | 20.0% |
| !! | ACACTTAAAAAAGAAAGATA+TGG | - | tig0020668:69661-69680 | Msa1384650:intron | 20.0% |
| !! | AATGAAAACTAATAACAAAC+AGG | - | tig0020668:69785-69804 | Msa1384650:intron | 20.0% |
| !!! | AATGCTAAATTTTTTGTTGA+TGG | - | tig0020668:70187-70206 | Msa1384650:intron | 20.0% |
| !!! | TTTTCTTCAACAAAATAGAA+GGG | + | tig0020668:70487-70506 | None:intergenic | 20.0% |
| !! | TTTCTTCAATAAACAAAAAC+CGG | - | tig0020668:71008-71027 | Msa1384650:intron | 20.0% |
| !! | TATGAAAAAAGGAGTACAAT+CGG | - | tig0020668:62096-62115 | Msa1384650:intron | 25.0% |
| !! | ATGTTGATTATGTGCATATT+TGG | - | tig0020668:62359-62378 | Msa1384650:intron | 25.0% |
| ! | AATGTGAAGTGATTTATGTT+TGG | - | tig0020668:62436-62455 | Msa1384650:intron | 25.0% |
| ! | CAAGTTAGAATTGATTATAC+TGG | - | tig0020668:62542-62561 | Msa1384650:intron | 25.0% |
| ! | ATTAAACCATAATAACTAGC+GGG | - | tig0020668:62609-62628 | Msa1384650:intron | 25.0% |
| ! | ACTAATATAATAGACACCTA+TGG | + | tig0020668:62983-63002 | None:intergenic | 25.0% |
| !!! | ATATTAGTCATTTTGGTCAT+TGG | - | tig0020668:62995-63014 | Msa1384650:intron | 25.0% |
| ! | TTTGCGATTTCAATACATTT+AGG | - | tig0020668:63113-63132 | Msa1384650:intron | 25.0% |
| ! | TTGCGATTTCAATACATTTA+GGG | - | tig0020668:63114-63133 | Msa1384650:intron | 25.0% |
| ! | GTTTGCTTAATTGTGTATAT+TGG | - | tig0020668:63173-63192 | Msa1384650:intron | 25.0% |
| !!! | ATGTCACATTTTAAGACAAT+TGG | - | tig0020668:64137-64156 | Msa1384650:intron | 25.0% |
| ! | ATAAGTAAGTAACTCAGTTA+GGG | - | tig0020668:64482-64501 | Msa1384650:intron | 25.0% |
| ! | TGTTCTATTCTCAAATAACA+AGG | - | tig0020668:64532-64551 | Msa1384650:intron | 25.0% |
| ! | AGGTTAGTATGAGAATATTA+TGG | - | tig0020668:64564-64583 | Msa1384650:intron | 25.0% |
| ! | GTTCAAAACGGATATTATAA+AGG | - | tig0020668:64605-64624 | Msa1384650:intron | 25.0% |
| ! | AAAGGATTTGAATTTCAGTA+AGG | - | tig0020668:64623-64642 | Msa1384650:intron | 25.0% |
| ! | TAAATATTTCCGCATTCAAT+GGG | + | tig0020668:65353-65372 | None:intergenic | 25.0% |
| ! | ATAAATATTTCCGCATTCAA+TGG | + | tig0020668:65354-65373 | None:intergenic | 25.0% |
| !!! | AGTTCTTTGTTGTTTAACTT+TGG | - | tig0020668:65440-65459 | Msa1384650:intron | 25.0% |
| ! | GAGGTTATTTGGAAAAAAAT+TGG | + | tig0020668:65789-65808 | None:intergenic | 25.0% |
| ! | AAAATCCAAATGCAAATTCA+AGG | + | tig0020668:65848-65867 | None:intergenic | 25.0% |
| ! | GTTGTAATACTTGAAGATAT+AGG | - | tig0020668:65868-65887 | Msa1384650:intron | 25.0% |
| ! | GAACATAATCAATTTCAACA+AGG | + | tig0020668:66196-66215 | None:intergenic | 25.0% |
| !! | CTATACTTATTGATGGTTAA+AGG | + | tig0020668:66228-66247 | None:intergenic | 25.0% |
| ! | CTTTCTTACATTATTGTTAC+AGG | - | tig0020668:66314-66333 | Msa1384650:intron | 25.0% |
| ! | AATCACCTTTAAATGATGAT+AGG | + | tig0020668:66403-66422 | None:intergenic | 25.0% |
| ! | AACTGAAAAAATAGGATAGT+GGG | + | tig0020668:66441-66460 | None:intergenic | 25.0% |
| ! | AAACTGAAAAAATAGGATAG+TGG | + | tig0020668:66442-66461 | None:intergenic | 25.0% |
| !!! | TATTTGTTGTTCATGACAAA+AGG | - | tig0020668:66611-66630 | Msa1384650:intron | 25.0% |
| !!! | ATTTGTTGTTCATGACAAAA+GGG | - | tig0020668:66612-66631 | Msa1384650:intron | 25.0% |
| ! | CTGTTATTACAGAAAAATGT+GGG | - | tig0020668:66639-66658 | Msa1384650:intron | 25.0% |
| !! | GCTTTTTATCTTAAACTCTT+TGG | - | tig0020668:66719-66738 | Msa1384650:CDS | 25.0% |
| ! | GAAAAAAATATCTCCAAAAC+TGG | - | tig0020668:66820-66839 | Msa1384650:intron | 25.0% |
| !! | AATACTGTATAAACCAGTTT+TGG | + | tig0020668:66836-66855 | None:intergenic | 25.0% |
| ! | ATTAGAGTCAACAATTAAGT+TGG | - | tig0020668:66873-66892 | Msa1384650:intron | 25.0% |
| ! | TGTTGGAAATATAAGATCTA+TGG | - | tig0020668:66939-66958 | Msa1384650:intron | 25.0% |
| ! | TCTTAAGAGTAATTAAGTCT+TGG | + | tig0020668:67477-67496 | None:intergenic | 25.0% |
| !!! | CTTTATTTTCTCATCATAAC+CGG | + | tig0020668:67763-67782 | None:intergenic | 25.0% |
| !!! | GTACTTTTCTGTTTCTTATT+TGG | - | tig0020668:67830-67849 | Msa1384650:intron | 25.0% |
| ! | TCTTATAATGAGAAACTGTT+AGG | - | tig0020668:67914-67933 | Msa1384650:intron | 25.0% |
| ! | TTGCAAACTCTTAATTACTT+AGG | - | tig0020668:68167-68186 | Msa1384650:intron | 25.0% |
| !!! | AGTTCTTTGTTTTGTTTGTT+AGG | - | tig0020668:68196-68215 | Msa1384650:intron | 25.0% |
| ! | TTATCCCTATTATAATACGT+AGG | + | tig0020668:68256-68275 | None:intergenic | 25.0% |
| !! | GTATAGTTTATTGATAGCAA+TGG | + | tig0020668:68373-68392 | None:intergenic | 25.0% |
| ! | TTGCTATCAATAAACTATAC+CGG | - | tig0020668:68373-68392 | Msa1384650:intron | 25.0% |
| ! | ACCTTCAAAATTAGAGAAAA+GGG | + | tig0020668:68408-68427 | None:intergenic | 25.0% |
| ! | AACCTTCAAAATTAGAGAAA+AGG | + | tig0020668:68409-68428 | None:intergenic | 25.0% |
| !!! | TTTCTCTAATTTTGAAGGTT+AGG | - | tig0020668:68409-68428 | Msa1384650:intron | 25.0% |
| !!! | GGGATTGATTTTGTTATTTT+TGG | - | tig0020668:68706-68725 | Msa1384650:intron | 25.0% |
| ! | AATTTAGTGAGACAGAATTA+AGG | - | tig0020668:68750-68769 | Msa1384650:intron | 25.0% |
| ! | ATTGAAGGTAAAAAGTTTGT+AGG | - | tig0020668:68793-68812 | Msa1384650:intron | 25.0% |
| !! | CATATCTTTTACCTGTTTTA+GGG | + | tig0020668:69092-69111 | None:intergenic | 25.0% |
| !! | TCATATCTTTTACCTGTTTT+AGG | + | tig0020668:69093-69112 | None:intergenic | 25.0% |
| ! | GATCTTCTATTGATACAATT+GGG | + | tig0020668:69305-69324 | None:intergenic | 25.0% |
| !!! | GAATAAAAAGCATCAATCTT+TGG | + | tig0020668:69725-69744 | None:intergenic | 25.0% |
| ! | ATTAACATGTTAGGTAAGAA+AGG | - | tig0020668:69837-69856 | Msa1384650:intron | 25.0% |
| ! | TTAACATGTTAGGTAAGAAA+GGG | - | tig0020668:69838-69857 | Msa1384650:intron | 25.0% |
| !! | ATCTATTTGTTAGCTTACAT+TGG | - | tig0020668:69882-69901 | Msa1384650:intron | 25.0% |
| !! | TCTATTTGTTAGCTTACATT+GGG | - | tig0020668:69883-69902 | Msa1384650:intron | 25.0% |
| ! | TGCAGAATCATTCAAATTAA+GGG | + | tig0020668:69967-69986 | None:intergenic | 25.0% |
| ! | TATTGTTTCAATGAACTTTC+AGG | - | tig0020668:70084-70103 | Msa1384650:intron | 25.0% |
| ! | ATTGTTTCAATGAACTTTCA+GGG | - | tig0020668:70085-70104 | Msa1384650:intron | 25.0% |
| !! | CTTTTCTTCAACAAAATAGA+AGG | + | tig0020668:70488-70507 | None:intergenic | 25.0% |
| ! | AGAAAAGAAACATGAAAATG+TGG | - | tig0020668:70501-70520 | Msa1384650:intron | 25.0% |
| !! | GGTTTTACAGTTATAGATTA+TGG | - | tig0020668:70768-70787 | Msa1384650:intron | 25.0% |
| !!! | AACTGACAACATTTTTTCAT+GGG | + | tig0020668:70841-70860 | None:intergenic | 25.0% |
| !!! | AAACTGACAACATTTTTTCA+TGG | + | tig0020668:70842-70861 | None:intergenic | 25.0% |
| ! | TTATACATTCACAATGTATG+TGG | - | tig0020668:70872-70891 | Msa1384650:intron | 25.0% |
| ! | TATACATTCACAATGTATGT+GGG | - | tig0020668:70873-70892 | Msa1384650:intron | 25.0% |
| ! | TTCTTCAATAAACAAAAACC+GGG | - | tig0020668:71009-71028 | Msa1384650:intron | 25.0% |
| !!! | TATTTTTTTCTTGTTTGTCC+TGG | - | tig0020668:71149-71168 | Msa1384650:intron | 25.0% |
| ! | GAAATTTGATACAGTTACTT+CGG | - | tig0020668:71373-71392 | Msa1384650:intron | 25.0% |
| ! | TAAGAGATAACAATTTCTTC+AGG | - | tig0020668:71450-71469 | Msa1384650:CDS | 25.0% |
| ! | AAACAGTTGCTAAAATCTAA+TGG | + | tig0020668:71634-71653 | None:intergenic | 25.0% |
| ! | AAAATGCAGCTTAAAAATTG+TGG | - | tig0020668:71683-71702 | Msa1384650:five_prime_UTR | 25.0% |
| ! | TCAACGAATCAAAAAATTTG+TGG | - | tig0020668:71712-71731 | Msa1384650:five_prime_UTR | 25.0% |
| ! | CAACGAATCAAAAAATTTGT+GGG | - | tig0020668:71713-71732 | Msa1384650:five_prime_UTR | 25.0% |
| AGATATTACGATGAAGAGAA+CGG | + | tig0020668:61991-62010 | None:intergenic | 30.0% | |
| CAGTCGAATCATATGAAAAA+AGG | - | tig0020668:62085-62104 | Msa1384650:intron | 30.0% | |
| TACAAATCAACTTCAACAGT+TGG | + | tig0020668:62169-62188 | None:intergenic | 30.0% | |
| GAAGTGATTTATGTTTGGAT+AGG | - | tig0020668:62441-62460 | Msa1384650:intron | 30.0% | |
| TTAAACCATAATAACTAGCG+GGG | - | tig0020668:62610-62629 | Msa1384650:intron | 30.0% | |
| ! | TTTTGATATGTTACTGTGTG+AGG | - | tig0020668:62639-62658 | Msa1384650:intron | 30.0% |
| TCGATGAATGTGTATAAGTT+TGG | - | tig0020668:62679-62698 | Msa1384650:intron | 30.0% | |
| AACTTGAAGCTAGAATTTGT+AGG | + | tig0020668:62854-62873 | None:intergenic | 30.0% | |
| ! | ATGGATGTGTTTTCAATGTT+AGG | + | tig0020668:62964-62983 | None:intergenic | 30.0% |
| AACATTGAAAACACATCCAT+AGG | - | tig0020668:62964-62983 | Msa1384650:intron | 30.0% | |
| !! | TGGTCATTGGATCTATTTTT+AGG | - | tig0020668:63008-63027 | Msa1384650:intron | 30.0% |
| ! | TTTTCGAATGTGTATTTCGT+TGG | - | tig0020668:63043-63062 | Msa1384650:intron | 30.0% |
| ATTACTAATAAAAGAGGGAC+TGG | - | tig0020668:63083-63102 | Msa1384650:intron | 30.0% | |
| TTACTAATAAAAGAGGGACT+GGG | - | tig0020668:63084-63103 | Msa1384650:intron | 30.0% | |
| !! | TGCAAAGTTTTGTCAAATAG+AGG | - | tig0020668:63310-63329 | Msa1384650:intron | 30.0% |
| ATAAGAGAATCACCTAAACA+GGG | + | tig0020668:63737-63756 | None:intergenic | 30.0% | |
| AATAAGAGAATCACCTAAAC+AGG | + | tig0020668:63738-63757 | None:intergenic | 30.0% | |
| TGTTTAGGTGATTCTCTTAT+TGG | - | tig0020668:63737-63756 | Msa1384650:intron | 30.0% | |
| GTTTAGGTGATTCTCTTATT+GGG | - | tig0020668:63738-63757 | Msa1384650:intron | 30.0% | |
| ! | TTGGATTAACATTGACTGTT+CGG | - | tig0020668:63835-63854 | Msa1384650:intron | 30.0% |
| ! | AAAGGTGTATATCTAGGAAA+CGG | - | tig0020668:63907-63926 | Msa1384650:intron | 30.0% |
| TATCATAGCATGATCAATCT+GGG | + | tig0020668:64007-64026 | None:intergenic | 30.0% | |
| TATTTCAACATCTTTCTGCT+GGG | - | tig0020668:64052-64071 | Msa1384650:intron | 30.0% | |
| TGACATAACGATACACAATA+TGG | + | tig0020668:64106-64125 | None:intergenic | 30.0% | |
| AGCATTCTTTAGTATAGTGA+TGG | - | tig0020668:64257-64276 | Msa1384650:CDS | 30.0% | |
| GCATTCTTTAGTATAGTGAT+GGG | - | tig0020668:64258-64277 | Msa1384650:CDS | 30.0% | |
| CATAAGTAAGTAACTCAGTT+AGG | - | tig0020668:64481-64500 | Msa1384650:intron | 30.0% | |
| AAATAACAAGGTGCATACTT+AGG | - | tig0020668:64544-64563 | Msa1384650:intron | 30.0% | |
| GAATATTATGGCTGTTAGAA+AGG | - | tig0020668:64576-64595 | Msa1384650:intron | 30.0% | |
| GATTTGAATTTCAGTAAGGT+GGG | - | tig0020668:64627-64646 | Msa1384650:intron | 30.0% | |
| AGTCTGAGTCAATAATTCTT+AGG | - | tig0020668:64780-64799 | Msa1384650:intron | 30.0% | |
| !! | TGTTTCTGATTTTTGTTTGC+AGG | - | tig0020668:64907-64926 | Msa1384650:intron | 30.0% |
| !! | GTTTCTGATTTTTGTTTGCA+GGG | - | tig0020668:64908-64927 | Msa1384650:intron | 30.0% |
| !! | TTTCTGATTTTTGTTTGCAG+GGG | - | tig0020668:64909-64928 | Msa1384650:intron | 30.0% |
| AAAACATGCTGGAAATAATC+TGG | - | tig0020668:65193-65212 | Msa1384650:intron | 30.0% | |
| CATAACTCATAAGTGTCTAT+AGG | + | tig0020668:65295-65314 | None:intergenic | 30.0% | |
| ! | TGTTGTTTAACTTTGGAAGT+TGG | - | tig0020668:65447-65466 | Msa1384650:intron | 30.0% |
| ACCTATCATAATATAACACC+TGG | - | tig0020668:65525-65544 | Msa1384650:intron | 30.0% | |
| CTTCTATAGTGATTGTTGAA+GGG | + | tig0020668:65609-65628 | None:intergenic | 30.0% | |
| AGGTGGAAAAGATAATAATG+AGG | + | tig0020668:65808-65827 | None:intergenic | 30.0% | |
| CTGTATTATGAAACTGTTTG+AGG | - | tig0020668:65913-65932 | Msa1384650:intron | 30.0% | |
| ATGAAATTGTTGAGTTAGTG+TGG | + | tig0020668:65949-65968 | None:intergenic | 30.0% | |
| AACAATTTCATGCTAGACAT+GGG | - | tig0020668:65958-65977 | Msa1384650:intron | 30.0% | |
| AGGTCCAATAAAAACCAAAA+AGG | - | tig0020668:66043-66062 | Msa1384650:intron | 30.0% | |
| GGTCCAATAAAAACCAAAAA+GGG | - | tig0020668:66044-66063 | Msa1384650:intron | 30.0% | |
| !!! | TCTCCCTTTTTGGTTTTTAT+TGG | + | tig0020668:66050-66069 | None:intergenic | 30.0% |
| ATAAAAACCAAAAAGGGAGA+TGG | - | tig0020668:66050-66069 | Msa1384650:intron | 30.0% | |
| ACTGTTATCCTACAAAAACT+TGG | + | tig0020668:66137-66156 | None:intergenic | 30.0% | |
| GAAATCATGATTCTTCCAAT+TGG | - | tig0020668:66336-66355 | Msa1384650:intron | 30.0% | |
| TGAGACCTATCATCATTTAA+AGG | - | tig0020668:66395-66414 | Msa1384650:intron | 30.0% | |
| ! | ACTTGATAATATTCGAGCAT+GGG | + | tig0020668:66517-66536 | None:intergenic | 30.0% |
| ! | AACTTGATAATATTCGAGCA+TGG | + | tig0020668:66518-66537 | None:intergenic | 30.0% |
| CAGCTCTATTACAATGATTA+AGG | - | tig0020668:66556-66575 | Msa1384650:intron | 30.0% | |
| AGCTTAAACAACATATCTCA+GGG | + | tig0020668:66583-66602 | None:intergenic | 30.0% | |
| GCTGTTATTACAGAAAAATG+TGG | - | tig0020668:66638-66657 | Msa1384650:intron | 30.0% | |
| ! | TTTAAGATAAAAAGCTTGCC+TGG | + | tig0020668:66714-66733 | None:intergenic | 30.0% |
| !! | TCTTTTACTCTCTGATTTGT+TGG | - | tig0020668:66922-66941 | Msa1384650:intron | 30.0% |
| AGTACTCCTATTACAACTAT+TGG | - | tig0020668:67072-67091 | Msa1384650:CDS | 30.0% | |
| AAATACCCTACAAATGCATA+GGG | + | tig0020668:67159-67178 | None:intergenic | 30.0% | |
| AAAATACCCTACAAATGCAT+AGG | + | tig0020668:67160-67179 | None:intergenic | 30.0% | |
| AGAATGATGTGTCTTTATTG+AGG | - | tig0020668:67442-67461 | Msa1384650:intron | 30.0% | |
| TAAATCACTTGCTTTATGCT+TGG | - | tig0020668:67587-67606 | Msa1384650:intron | 30.0% | |
| AAATCACTTGCTTTATGCTT+GGG | - | tig0020668:67588-67607 | Msa1384650:intron | 30.0% | |
| ! | GCTGGTACAAATTTTTGTAT+TGG | - | tig0020668:67798-67817 | Msa1384650:intron | 30.0% |
| AAGAGCAATAAGCAATGATA+AGG | + | tig0020668:67898-67917 | None:intergenic | 30.0% | |
| AAATCAAATCAAGAGAGAGA+TGG | + | tig0020668:67989-68008 | None:intergenic | 30.0% | |
| TAGTAATCCTATCAGTAGTA+GGG | + | tig0020668:68120-68139 | None:intergenic | 30.0% | |
| ATTATAATACGTAGGCCATA+GGG | + | tig0020668:68248-68267 | None:intergenic | 30.0% | |
| TATTATAATACGTAGGCCAT+AGG | + | tig0020668:68249-68268 | None:intergenic | 30.0% | |
| TATGGCCTACGTATTATAAT+AGG | - | tig0020668:68248-68267 | Msa1384650:CDS | 30.0% | |
| ATGGCCTACGTATTATAATA+GGG | - | tig0020668:68249-68268 | Msa1384650:CDS | 30.0% | |
| AGCAATGGAAAAAGTTACAA+AGG | + | tig0020668:68358-68377 | None:intergenic | 30.0% | |
| CCTTCAAAATTAGAGAAAAG+GGG | + | tig0020668:68407-68426 | None:intergenic | 30.0% | |
| !! | CTAATATTGTTTTGCAACGA+CGG | + | tig0020668:68530-68549 | None:intergenic | 30.0% |
| CAGATTCAGATGTAAAGATA+TGG | + | tig0020668:68645-68664 | None:intergenic | 30.0% | |
| CATATCTTTACATCTGAATC+TGG | - | tig0020668:68643-68662 | Msa1384650:intron | 30.0% | |
| ! | GACCTGATCATAATCATTTT+CGG | - | tig0020668:68681-68700 | Msa1384650:intron | 30.0% |
| ! | ACCTGATCATAATCATTTTC+GGG | - | tig0020668:68682-68701 | Msa1384650:intron | 30.0% |
| GGTTAACAGTGAAATGTAAA+AGG | + | tig0020668:69042-69061 | None:intergenic | 30.0% | |
| ATGCATAGAACAACATAAAC+TGG | + | tig0020668:69063-69082 | None:intergenic | 30.0% | |
| AACAGGTAAAAGATATGATC+TGG | - | tig0020668:69095-69114 | Msa1384650:intron | 30.0% | |
| GGATATGATAGAATTGTACA+AGG | - | tig0020668:69164-69183 | Msa1384650:intron | 30.0% | |
| GGATCTTCTATTGATACAAT+TGG | + | tig0020668:69306-69325 | None:intergenic | 30.0% | |
| AATAGAAGATCCATTTGACA+AGG | - | tig0020668:69314-69333 | Msa1384650:intron | 30.0% | |
| CTATTGCAGAGACAAAAAAA+TGG | + | tig0020668:69550-69569 | None:intergenic | 30.0% | |
| TTTGTCTCTGCAATAGTTAA+AGG | - | tig0020668:69554-69573 | Msa1384650:intron | 30.0% | |
| TTGTCTCTGCAATAGTTAAA+GGG | - | tig0020668:69555-69574 | Msa1384650:intron | 30.0% | |
| ! | GTTAAGCAGCTATAATTTGT+TGG | - | tig0020668:69691-69710 | Msa1384650:intron | 30.0% |
| ATATCTCATAACCTCCAAAA+CGG | + | tig0020668:69762-69781 | None:intergenic | 30.0% | |
| TGATGACACATTAACATGTT+AGG | - | tig0020668:69828-69847 | Msa1384650:intron | 30.0% | |
| TAACATGTTAGGTAAGAAAG+GGG | - | tig0020668:69839-69858 | Msa1384650:intron | 30.0% | |
| CTGCAGAATCATTCAAATTA+AGG | + | tig0020668:69968-69987 | None:intergenic | 30.0% | |
| ! | CTTAATTTGAATGATTCTGC+AGG | - | tig0020668:69966-69985 | Msa1384650:intron | 30.0% |
| TTGTAATGCTCTTCTTCTTA+AGG | - | tig0020668:70053-70072 | Msa1384650:intron | 30.0% | |
| CCTCAACTTAATTATGAAAC+AGG | + | tig0020668:70226-70245 | None:intergenic | 30.0% | |
| ! | CCTGTTTCATAATTAAGTTG+AGG | - | tig0020668:70223-70242 | Msa1384650:intron | 30.0% |
| !! | TCATAATTAAGTTGAGGCAT+TGG | - | tig0020668:70229-70248 | Msa1384650:intron | 30.0% |
| !! | CATAATTAAGTTGAGGCATT+GGG | - | tig0020668:70230-70249 | Msa1384650:intron | 30.0% |
| GAAAAAAAATGCAAACACAG+TGG | + | tig0020668:70412-70431 | None:intergenic | 30.0% | |
| TTTCCTCTCTATTTATCTAG+AGG | - | tig0020668:70428-70447 | Msa1384650:intron | 30.0% | |
| TTCCTCTCTATTTATCTAGA+GGG | - | tig0020668:70429-70448 | Msa1384650:intron | 30.0% | |
| !!! | GGTTTTAAGTGGTGATTTTA+GGG | - | tig0020668:70894-70913 | Msa1384650:intron | 30.0% |
| !! | GTTTTAAGTGGTGATTTTAG+GGG | - | tig0020668:70895-70914 | Msa1384650:intron | 30.0% |
| TCTTCAATAAACAAAAACCG+GGG | - | tig0020668:71010-71029 | Msa1384650:intron | 30.0% | |
| ATTGTGAACCTTACATAACT+TGG | - | tig0020668:71038-71057 | Msa1384650:intron | 30.0% | |
| TAGAAAACTCCTGTTATGAT+AGG | - | tig0020668:71222-71241 | Msa1384650:CDS | 30.0% | |
| !!! | TTTTTTCTTTCTCCAAGTGA+AGG | - | tig0020668:71331-71350 | Msa1384650:CDS | 30.0% |
| TCAAAAAACCCCAAAAAGAT+AGG | - | tig0020668:71525-71544 | Msa1384650:exon | 30.0% | |
| ! | AAGTTGAACCTATCTTTTTG+GGG | + | tig0020668:71536-71555 | None:intergenic | 30.0% |
| ! | GAAGTTGAACCTATCTTTTT+GGG | + | tig0020668:71537-71556 | None:intergenic | 30.0% |
| ! | TGAAGTTGAACCTATCTTTT+TGG | + | tig0020668:71538-71557 | None:intergenic | 30.0% |
| TGATGAAATGAATGAGGTCA+AGG | + | tig0020668:61819-61838 | None:intergenic | 35.0% | |
| ! | CATTTCTACGATCGATTCTT+CGG | + | tig0020668:61880-61899 | None:intergenic | 35.0% |
| ATATTACGATGAAGAGAACG+GGG | + | tig0020668:61989-62008 | None:intergenic | 35.0% | |
| GATATTACGATGAAGAGAAC+GGG | + | tig0020668:61990-62009 | None:intergenic | 35.0% | |
| TGATTACGAAAGTAAAAGCG+AGG | - | tig0020668:62119-62138 | Msa1384650:intron | 35.0% | |
| ! | AGGCAAATTCTTGATAGTAG+AGG | - | tig0020668:62139-62158 | Msa1384650:intron | 35.0% |
| ATTAACATCTTACATGCCAG+TGG | + | tig0020668:62236-62255 | None:intergenic | 35.0% | |
| CCTCACACATTCAATTACTA+CGG | + | tig0020668:62320-62339 | None:intergenic | 35.0% | |
| ! | TTTTTCCCCGCTAGTTATTA+TGG | + | tig0020668:62618-62637 | None:intergenic | 35.0% |
| !! | TGTGTATAAGTTTGGTTCTG+TGG | - | tig0020668:62687-62706 | Msa1384650:intron | 35.0% |
| TCAATGTTAGGTTTCACATC+TGG | + | tig0020668:62952-62971 | None:intergenic | 35.0% | |
| TACTAATAAAAGAGGGACTG+GGG | - | tig0020668:63085-63104 | Msa1384650:intron | 35.0% | |
| ACATCAGTCTTCTTAAATCG+TGG | - | tig0020668:63230-63249 | Msa1384650:intron | 35.0% | |
| CATTGCCTAAACTTTCTATG+CGG | - | tig0020668:63425-63444 | Msa1384650:CDS | 35.0% | |
| AAGTTCCGCATAGAAAGTTT+AGG | + | tig0020668:63433-63452 | None:intergenic | 35.0% | |
| CATTCTGATGCAATTTCACT+TGG | - | tig0020668:63515-63534 | Msa1384650:intron | 35.0% | |
| TAGATATAGCTAGCCAAACA+AGG | + | tig0020668:63639-63658 | None:intergenic | 35.0% | |
| ! | TGTTTGGCTAGCTATATCTA+AGG | - | tig0020668:63639-63658 | Msa1384650:intron | 35.0% |
| ! | TGGATTAACATTGACTGTTC+GGG | - | tig0020668:63836-63855 | Msa1384650:intron | 35.0% |
| ! | GATGATTCATTTCAGGTATG+AGG | - | tig0020668:63861-63880 | Msa1384650:intron | 35.0% |
| CTATCATAGCATGATCAATC+TGG | + | tig0020668:64008-64027 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTCTGTTTTGTCA+AGG | + | tig0020668:64032-64051 | None:intergenic | 35.0% |
| CCTTGACAAAACAGAGAAAA+AGG | - | tig0020668:64029-64048 | Msa1384650:intron | 35.0% | |
| GTATTTCAACATCTTTCTGC+TGG | - | tig0020668:64051-64070 | Msa1384650:intron | 35.0% | |
| TTTCATTTCCTTTCCTGCAA+CGG | + | tig0020668:64318-64337 | None:intergenic | 35.0% | |
| !! | ACACACTTTTGTTTCGTAGT+GGG | - | tig0020668:64382-64401 | Msa1384650:intron | 35.0% |
| AATAAAGTTGGGACAGTGTT+TGG | - | tig0020668:64450-64469 | Msa1384650:intron | 35.0% | |
| !! | GAAAGGTGTTGTGTTCAAAA+CGG | - | tig0020668:64593-64612 | Msa1384650:intron | 35.0% |
| GGATTTGAATTTCAGTAAGG+TGG | - | tig0020668:64626-64645 | Msa1384650:intron | 35.0% | |
| !! | TTCTGATTTTTGTTTGCAGG+GGG | - | tig0020668:64910-64929 | Msa1384650:intron | 35.0% |
| ATAACAGTAAAAGCAGGAAC+AGG | + | tig0020668:65164-65183 | None:intergenic | 35.0% | |
| !! | CCTGCTTTTACTGTTATAAG+CGG | - | tig0020668:65167-65186 | Msa1384650:intron | 35.0% |
| TGGAAATAATCTGGCAATTG+AGG | - | tig0020668:65202-65221 | Msa1384650:intron | 35.0% | |
| AGTTAAATGCCCATTGAATG+CGG | - | tig0020668:65341-65360 | Msa1384650:intron | 35.0% | |
| ACAAAGAACTGACAAGATGT+TGG | + | tig0020668:65430-65449 | None:intergenic | 35.0% | |
| ! | TAACTTTGGAAGTTGGATTG+TGG | - | tig0020668:65454-65473 | Msa1384650:intron | 35.0% |
| ! | GCCAGGTGTTATATTATGAT+AGG | + | tig0020668:65529-65548 | None:intergenic | 35.0% |
| GCTTCTATAGTGATTGTTGA+AGG | + | tig0020668:65610-65629 | None:intergenic | 35.0% | |
| AAAGTGGAAGTTGCATTGAA+CGG | + | tig0020668:65651-65670 | None:intergenic | 35.0% | |
| !!! | TTCGCTTTTTCTTGAGAAAG+TGG | + | tig0020668:65667-65686 | None:intergenic | 35.0% |
| TTCTCTTCTTACTGCAACAA+TGG | + | tig0020668:65714-65733 | None:intergenic | 35.0% | |
| CGATCATTAACCATTGAGTT+TGG | + | tig0020668:65741-65760 | None:intergenic | 35.0% | |
| CAACAATTTCATGCTAGACA+TGG | - | tig0020668:65957-65976 | Msa1384650:intron | 35.0% | |
| TGAATGCTCTATGAAAACAG+AGG | - | tig0020668:66023-66042 | Msa1384650:intron | 35.0% | |
| GGATAACAGTAAAAACAGCA+TGG | - | tig0020668:66147-66166 | Msa1384650:intron | 35.0% | |
| AACAGTAAAAACAGCATGGA+TGG | - | tig0020668:66151-66170 | Msa1384650:intron | 35.0% | |
| CAGCTTAAACAACATATCTC+AGG | + | tig0020668:66584-66603 | None:intergenic | 35.0% | |
| !! | GAGTCAACAATTAAGTTGGT+TGG | - | tig0020668:66877-66896 | Msa1384650:intron | 35.0% |
| !! | TCTTAATCTAACTTGCTCTG+AGG | - | tig0020668:67016-67035 | Msa1384650:intron | 35.0% |
| AGCAGTCCAATAGTTGTAAT+AGG | + | tig0020668:67081-67100 | None:intergenic | 35.0% | |
| ACTAATCCCTATGCATTTGT+AGG | - | tig0020668:67150-67169 | Msa1384650:intron | 35.0% | |
| CTAATCCCTATGCATTTGTA+GGG | - | tig0020668:67151-67170 | Msa1384650:intron | 35.0% | |
| !!! | TAGACTTTTTAGAATCTGCC+TGG | + | tig0020668:67269-67288 | None:intergenic | 35.0% |
| ! | ATCATAACCGGTTCTACTAA+TGG | + | tig0020668:67751-67770 | None:intergenic | 35.0% |
| !! | TTGGTTCTAGATTCTTGAGA+AGG | - | tig0020668:67849-67868 | Msa1384650:intron | 35.0% |
| TCAAAATCCTCCCTAATAGA+AGG | + | tig0020668:67950-67969 | None:intergenic | 35.0% | |
| AGTAATCCTATCAGTAGTAG+GGG | + | tig0020668:68119-68138 | None:intergenic | 35.0% | |
| CTAGTAATCCTATCAGTAGT+AGG | + | tig0020668:68121-68140 | None:intergenic | 35.0% | |
| TAATAGGGATAACCTCACTT+TGG | - | tig0020668:68264-68283 | Msa1384650:CDS | 35.0% | |
| AATAGGGATAACCTCACTTT+GGG | - | tig0020668:68265-68284 | Msa1384650:CDS | 35.0% | |
| ! | CCCCTTTTCTCTAATTTTGA+AGG | - | tig0020668:68404-68423 | Msa1384650:intron | 35.0% |
| TGAAGGTTAGGAAAATTCCT+TGG | - | tig0020668:68421-68440 | Msa1384650:intron | 35.0% | |
| AAACGACATATCACCATTAG+CGG | + | tig0020668:68620-68639 | None:intergenic | 35.0% | |
| ! | CCTGATCATAATCATTTTCG+GGG | - | tig0020668:68683-68702 | Msa1384650:intron | 35.0% |
| ! | CTGATCATAATCATTTTCGG+GGG | - | tig0020668:68684-68703 | Msa1384650:intron | 35.0% |
| !! | TGATCATAATCATTTTCGGG+GGG | - | tig0020668:68685-68704 | Msa1384650:intron | 35.0% |
| GACAGAATTAAGGCTTGAAA+AGG | - | tig0020668:68760-68779 | Msa1384650:intron | 35.0% | |
| AGAGGTTTATAAATGCCTTG+TGG | + | tig0020668:69005-69024 | None:intergenic | 35.0% | |
| CTTTAAATCTCCTCAAACGT+CGG | - | tig0020668:69119-69138 | Msa1384650:intron | 35.0% | |
| TTTAAATCTCCTCAAACGTC+GGG | - | tig0020668:69120-69139 | Msa1384650:intron | 35.0% | |
| !! | ACAGAATTTTAAGTCAGCAG+AGG | - | tig0020668:69143-69162 | Msa1384650:intron | 35.0% |
| TTGTACAAGGAACTATGTAC+CGG | - | tig0020668:69177-69196 | Msa1384650:intron | 35.0% | |
| GTGTAAATAGCCTGATTTAC+CGG | + | tig0020668:69199-69218 | None:intergenic | 35.0% | |
| TATTTACACCTTTGCAACTG+AGG | - | tig0020668:69210-69229 | Msa1384650:intron | 35.0% | |
| TATAACAACCTCAGTTGCAA+AGG | + | tig0020668:69221-69240 | None:intergenic | 35.0% | |
| ATCCATTTGACAAGGAAGAT+TGG | - | tig0020668:69322-69341 | Msa1384650:intron | 35.0% | |
| TCCATTTGACAAGGAAGATT+GGG | - | tig0020668:69323-69342 | Msa1384650:intron | 35.0% | |
| ATCAAGTATATCTCAAGCCT+TGG | - | tig0020668:69351-69370 | Msa1384650:intron | 35.0% | |
| ATAATACCTGGCAAATTCCA+AGG | + | tig0020668:69371-69390 | None:intergenic | 35.0% | |
| !! | TCCTTTTTAAGAGTCTTTCC+AGG | - | tig0020668:69435-69454 | Msa1384650:CDS | 35.0% |
| ACCTGGAAAGACTCTTAAAA+AGG | + | tig0020668:69439-69458 | None:intergenic | 35.0% | |
| ! | AGGTTTTTGTATGCTAACGA+CGG | - | tig0020668:69455-69474 | Msa1384650:CDS | 35.0% |
| ATGGCGAAATGAAATGTCAA+GGG | + | tig0020668:69531-69550 | None:intergenic | 35.0% | |
| AATGGCGAAATGAAATGTCA+AGG | + | tig0020668:69532-69551 | None:intergenic | 35.0% | |
| ! | TGTAGTAAGCATTACCGTTT+TGG | - | tig0020668:69745-69764 | Msa1384650:intron | 35.0% |
| ACAGGTTATTAGTGTAGCAA+TGG | - | tig0020668:69803-69822 | Msa1384650:intron | 35.0% | |
| GCATTAGTAAGGTTGCTTAT+TGG | - | tig0020668:69910-69929 | Msa1384650:intron | 35.0% | |
| ! | TCTCTCAGTTTGTTTAAGCT+TGG | - | tig0020668:70140-70159 | Msa1384650:intron | 35.0% |
| ! | GTATCTTCAAACTCTGGAAA+AGG | - | tig0020668:70252-70271 | Msa1384650:intron | 35.0% |
| ! | TTCATAGCTGATTTATCCGT+TGG | - | tig0020668:70653-70672 | Msa1384650:intron | 35.0% |
| GCGATTAGAAAAATACAACC+AGG | - | tig0020668:70721-70740 | Msa1384650:intron | 35.0% | |
| ATAAGAATGTGAAAGAGACC+TGG | + | tig0020668:70742-70761 | None:intergenic | 35.0% | |
| CTTTCACATTCTTATGCTGA+TGG | - | tig0020668:70747-70766 | Msa1384650:intron | 35.0% | |
| !!! | ACAACATTTTTTCATGGGTG+AGG | + | tig0020668:70836-70855 | None:intergenic | 35.0% |
| !!! | CAATGTATGTGGGTTTTAAG+TGG | - | tig0020668:70883-70902 | Msa1384650:intron | 35.0% |
| !!! | GGGTTTTAAGTGGTGATTTT+AGG | - | tig0020668:70893-70912 | Msa1384650:intron | 35.0% |
| CCAAGATATCCTAAAAGCAA+CGG | + | tig0020668:70950-70969 | None:intergenic | 35.0% | |
| AGAAATAGAGACAGTTCATC+GGG | + | tig0020668:70973-70992 | None:intergenic | 35.0% | |
| GAGAAATAGAGACAGTTCAT+CGG | + | tig0020668:70974-70993 | None:intergenic | 35.0% | |
| !! | TTCTGTTGTTTCACTTTACC+AGG | + | tig0020668:71170-71189 | None:intergenic | 35.0% |
| TTATGATAGGATCCGGAAAA+GGG | - | tig0020668:71235-71254 | Msa1384650:CDS | 35.0% | |
| TAAAGTCTGACAGCCTATAA+TGG | + | tig0020668:71278-71297 | None:intergenic | 35.0% | |
| TGTCATACTTTACCTTCACT+TGG | + | tig0020668:71346-71365 | None:intergenic | 35.0% | |
| ! | GGCAACACACTGTAAAATTT+TGG | + | tig0020668:71602-71621 | None:intergenic | 35.0% |
| AAAATCTAATGGCGCAATTG+AGG | + | tig0020668:71623-71642 | None:intergenic | 35.0% | |
| AACTGTTTGACTGAGTGTTT+AGG | - | tig0020668:71646-71665 | Msa1384650:five_prime_UTR | 35.0% | |
| ! | GAGTGGTGATGAAATGAATG+AGG | + | tig0020668:61825-61844 | None:intergenic | 40.0% |
| CCGTAGTAATTGAATGTGTG+AGG | - | tig0020668:62317-62336 | Msa1384650:intron | 40.0% | |
| ! | CTGAAATTCAATTCTGGAGG+TGG | + | tig0020668:62924-62943 | None:intergenic | 40.0% |
| CAGCTGAAATTCAATTCTGG+AGG | + | tig0020668:62927-62946 | None:intergenic | 40.0% | |
| GAGCAGCTGAAATTCAATTC+TGG | + | tig0020668:62930-62949 | None:intergenic | 40.0% | |
| GCTATAACACTGTAGCATAG+CGG | - | tig0020668:63343-63362 | Msa1384650:intron | 40.0% | |
| ATCATCAGTGTTATCGACCT+CGG | + | tig0020668:63398-63417 | None:intergenic | 40.0% | |
| !! | TACAAAGCTCAAGCCTTGTT+TGG | - | tig0020668:63623-63642 | Msa1384650:intron | 40.0% |
| TACACTCTATTAGAACTGCC+TGG | - | tig0020668:63672-63691 | Msa1384650:intron | 40.0% | |
| !! | TCGGGTTGATGATTCATTTC+AGG | - | tig0020668:63854-63873 | Msa1384650:intron | 40.0% |
| !! | AAAATATCTGAGGCGCTGAT+TGG | - | tig0020668:63961-63980 | Msa1384650:intron | 40.0% |
| AAGACAATTGGAAACCGAGT+AGG | - | tig0020668:64149-64168 | Msa1384650:intron | 40.0% | |
| AGACAATTGGAAACCGAGTA+GGG | - | tig0020668:64150-64169 | Msa1384650:intron | 40.0% | |
| !!! | AGCTGCTTTTTTTCCCTACT+CGG | + | tig0020668:64166-64185 | None:intergenic | 40.0% |
| TTTCTCTCTTGCTCTTGTTC+AGG | - | tig0020668:64223-64242 | Msa1384650:intron | 40.0% | |
| !! | CAACATTTTGTTTCCGTTGC+AGG | - | tig0020668:64302-64321 | Msa1384650:CDS | 40.0% |
| !! | TTTTGTTTCCGTTGCAGGAA+AGG | - | tig0020668:64307-64326 | Msa1384650:CDS | 40.0% |
| !! | GACACACTTTTGTTTCGTAG+TGG | - | tig0020668:64381-64400 | Msa1384650:intron | 40.0% |
| ! | GTCTTTCTTCCGTTTTCATC+CGG | - | tig0020668:64743-64762 | Msa1384650:intron | 40.0% |
| AGACTACTTTCATCAAGCTC+CGG | + | tig0020668:64765-64784 | None:intergenic | 40.0% | |
| CCGCTTATAACAGTAAAAGC+AGG | + | tig0020668:65170-65189 | None:intergenic | 40.0% | |
| ! | GCTTTTACTGTTATAAGCGG+TGG | - | tig0020668:65170-65189 | Msa1384650:intron | 40.0% |
| TTGGAAGTTGGATTGTGGAA+AGG | - | tig0020668:65459-65478 | Msa1384650:intron | 40.0% | |
| AGAGAAGAGTCCAAACTCAA+TGG | - | tig0020668:65728-65747 | Msa1384650:intron | 40.0% | |
| !! | CTTGGCCTTGAATTTGCATT+TGG | - | tig0020668:65840-65859 | Msa1384650:intron | 40.0% |
| ! | TCCATGTGCCAAGTTTTTGT+AGG | - | tig0020668:66126-66145 | Msa1384650:intron | 40.0% |
| TCCTACAAAAACTTGGCACA+TGG | + | tig0020668:66130-66149 | None:intergenic | 40.0% | |
| AAATCACTATGAAGCAGCAG+AGG | + | tig0020668:66273-66292 | None:intergenic | 40.0% | |
| TCAAATCTGCTTGCTCCAAT+TGG | + | tig0020668:66354-66373 | None:intergenic | 40.0% | |
| !! | ATTTGATGAAGCACTGCGAA+TGG | - | tig0020668:66368-66387 | Msa1384650:intron | 40.0% |
| !! | TTTGATGAAGCACTGCGAAT+GGG | - | tig0020668:66369-66388 | Msa1384650:intron | 40.0% |
| TCACCGACATTACAGTTATG+TGG | + | tig0020668:66665-66684 | None:intergenic | 40.0% | |
| AACTGTAATGTCGGTGAAGA+TGG | - | tig0020668:66668-66687 | Msa1384650:intron | 40.0% | |
| TGGACTGCTTCTTAATCTCT+AGG | - | tig0020668:67092-67111 | Msa1384650:intron | 40.0% | |
| AGCTCACGAACCTTCTATTA+GGG | - | tig0020668:67937-67956 | Msa1384650:intron | 40.0% | |
| AGAGATGGAGAGAAAGTTAG+AGG | + | tig0020668:67974-67993 | None:intergenic | 40.0% | |
| TTGTTGTGAAGTTGACCCTA+TGG | - | tig0020668:68230-68249 | Msa1384650:CDS | 40.0% | |
| ATAGGGATAACCTCACTTTG+GGG | - | tig0020668:68266-68285 | Msa1384650:CDS | 40.0% | |
| TCCTTGGAGAAACTGTGTTA+CGG | - | tig0020668:68437-68456 | Msa1384650:intron | 40.0% | |
| CCCCGAAAATGATTATGATC+AGG | + | tig0020668:68686-68705 | None:intergenic | 40.0% | |
| !! | GATCATAATCATTTTCGGGG+GGG | - | tig0020668:68686-68705 | Msa1384650:intron | 40.0% |
| !! | CAATCTTTAGAGCGTGTCAT+TGG | - | tig0020668:68847-68866 | Msa1384650:intron | 40.0% |
| !! | AAGGTGTCAAAAAGCACTAG+AGG | + | tig0020668:69023-69042 | None:intergenic | 40.0% |
| ! | TGCATGCTTTTCCCTAAAAC+AGG | - | tig0020668:69078-69097 | Msa1384650:intron | 40.0% |
| ! | GAACTATGTACCGGTAAATC+AGG | - | tig0020668:69186-69205 | Msa1384650:intron | 40.0% |
| TCCCAATCTTCCTTGTCAAA+TGG | + | tig0020668:69327-69346 | None:intergenic | 40.0% | |
| GTCGTTAGCATACAAAAACC+TGG | + | tig0020668:69456-69475 | None:intergenic | 40.0% | |
| !! | GCAGCTATAATTTGTTGGCT+AGG | - | tig0020668:69696-69715 | Msa1384650:intron | 40.0% |
| ! | AGTAAGCATTACCGTTTTGG+AGG | - | tig0020668:69748-69767 | Msa1384650:intron | 40.0% |
| !! | CATTGGGTTGAGCATTAGTA+AGG | - | tig0020668:69899-69918 | Msa1384650:intron | 40.0% |
| TGAATGATTCTGCAGGTAGT+AGG | - | tig0020668:69973-69992 | Msa1384650:intron | 40.0% | |
| GAATGATTCTGCAGGTAGTA+GGG | - | tig0020668:69974-69993 | Msa1384650:intron | 40.0% | |
| AATGATTCTGCAGGTAGTAG+GGG | - | tig0020668:69975-69994 | Msa1384650:intron | 40.0% | |
| ! | CTCAGTTTGTTTAAGCTTGG+AGG | - | tig0020668:70143-70162 | Msa1384650:intron | 40.0% |
| CATTGGGTATCTTCAAACTC+TGG | - | tig0020668:70246-70265 | Msa1384650:intron | 40.0% | |
| CAGTGGCAAAACTAAAGTAC+TGG | + | tig0020668:70395-70414 | None:intergenic | 40.0% | |
| TGCCCTCTAGATAAATAGAG+AGG | + | tig0020668:70434-70453 | None:intergenic | 40.0% | |
| ! | ATAGAAGGGAAGTACATGAG+AGG | + | tig0020668:70473-70492 | None:intergenic | 40.0% |
| ! | GTTATTTCCCATTGTGATCC+AGG | - | tig0020668:70523-70542 | Msa1384650:intron | 40.0% |
| TTTGACCACTTCAATGACCT+CGG | + | tig0020668:70570-70589 | None:intergenic | 40.0% | |
| CTTTAATCTGACCAACAGCA+AGG | + | tig0020668:70679-70698 | None:intergenic | 40.0% | |
| !!! | GTTTTCTGTCCGTTGCTTTT+AGG | - | tig0020668:70938-70957 | Msa1384650:intron | 40.0% |
| !!! | CCGTTGCTTTTAGGATATCT+TGG | - | tig0020668:70947-70966 | Msa1384650:intron | 40.0% |
| AACGAGTGCCAAGTTATGTA+AGG | + | tig0020668:71049-71068 | None:intergenic | 40.0% | |
| !! | ACTAGCTGCGAGTCTTATTT+AGG | - | tig0020668:71093-71112 | Msa1384650:intron | 40.0% |
| !! | CTAGCTGCGAGTCTTATTTA+GGG | - | tig0020668:71094-71113 | Msa1384650:intron | 40.0% |
| ACTCCTGTTATGATAGGATC+CGG | - | tig0020668:71228-71247 | Msa1384650:CDS | 40.0% | |
| TTTCCGGATCCTATCATAAC+AGG | + | tig0020668:71234-71253 | None:intergenic | 40.0% | |
| GTTATGATAGGATCCGGAAA+AGG | - | tig0020668:71234-71253 | Msa1384650:CDS | 40.0% | |
| ACTCCTCATGAGTCCATTAT+AGG | - | tig0020668:71262-71281 | Msa1384650:CDS | 40.0% | |
| GATACAGTTACTTCGGATTG+AGG | - | tig0020668:71380-71399 | Msa1384650:intron | 40.0% | |
| CAGTTTATGCTGGTGAAGAT+TGG | - | tig0020668:71421-71440 | Msa1384650:intron | 40.0% | |
| TTTATGCTGGTGAAGATTGG+AGG | - | tig0020668:71424-71443 | Msa1384650:intron | 40.0% | |
| ! | AGGTAGGACCATTCTGAGAA+AGG | - | tig0020668:61717-61736 | Msa1384650:three_prime_UTR | 45.0% |
| CGTGAAAGCCTTTCTCAGAA+TGG | + | tig0020668:61728-61747 | None:intergenic | 45.0% | |
| !! | ATTCGTCTTTTTCACGCGCT+CGG | + | tig0020668:61854-61873 | None:intergenic | 45.0% |
| TTTCGTGCTTCTGTTCCATC+TGG | - | tig0020668:62205-62224 | Msa1384650:intron | 45.0% | |
| !! | TCATGAAGGCACTGTCACTA+TGG | + | tig0020668:63141-63160 | None:intergenic | 45.0% |
| GCGGAACTTAACAGAAAACG+TGG | - | tig0020668:63444-63463 | Msa1384650:intron | 45.0% | |
| ACTCGGCACAGTTAGTTACA+AGG | - | tig0020668:63596-63615 | Msa1384650:intron | 45.0% | |
| GTTTACAGTCTCAATCAGCC+TGG | + | tig0020668:63707-63726 | None:intergenic | 45.0% | |
| TAAACTGCACTGCCCTGTTT+AGG | - | tig0020668:63722-63741 | Msa1384650:intron | 45.0% | |
| GGTATGAGGCTGTTGAGTTA+CGG | - | tig0020668:63875-63894 | Msa1384650:intron | 45.0% | |
| GTATGAGGCTGTTGAGTTAC+GGG | - | tig0020668:63876-63895 | Msa1384650:intron | 45.0% | |
| ! | GGGGACAAAGGTGTATATCT+AGG | - | tig0020668:63901-63920 | Msa1384650:intron | 45.0% |
| TCACCTAGTGAGGTAAAGCT+TGG | - | tig0020668:64190-64209 | Msa1384650:intron | 45.0% | |
| CAACCAAGCTTTACCTCACT+AGG | + | tig0020668:64196-64215 | None:intergenic | 45.0% | |
| CTCTTGCTCTTGTTCAGGAT+AGG | - | tig0020668:64228-64247 | Msa1384650:intron | 45.0% | |
| CATCAAGCTCCGGATGAAAA+CGG | + | tig0020668:64755-64774 | None:intergenic | 45.0% | |
| !! | TTTTGTTTGCAGGGGGAACT+TGG | - | tig0020668:64917-64936 | Msa1384650:intron | 45.0% |
| TTTGTTTGCAGGGGGAACTT+GGG | - | tig0020668:64918-64937 | Msa1384650:intron | 45.0% | |
| TCCATTGCTGCATGTAAAGC+TGG | - | tig0020668:64962-64981 | Msa1384650:intron | 45.0% | |
| CCATTGCTGCATGTAAAGCT+GGG | - | tig0020668:64963-64982 | Msa1384650:intron | 45.0% | |
| CATTGCTGCATGTAAAGCTG+GGG | - | tig0020668:64964-64983 | Msa1384650:intron | 45.0% | |
| !!! | CTGGGTTAGTTTTTCCAGAC+AGG | + | tig0020668:65136-65155 | None:intergenic | 45.0% |
| ATAAGCGGTGGAAAACATGC+TGG | - | tig0020668:65182-65201 | Msa1384650:intron | 45.0% | |
| CCAAAAAGGGAGATGGATGA+CGG | - | tig0020668:66057-66076 | Msa1384650:intron | 45.0% | |
| GTTGTTCATGACAAAAGGGC+AGG | - | tig0020668:66616-66635 | Msa1384650:intron | 45.0% | |
| GGGCCACATAACTGTAATGT+CGG | - | tig0020668:66659-66678 | Msa1384650:intron | 45.0% | |
| TGTAATGTCGGTGAAGATGG+TGG | - | tig0020668:66671-66690 | Msa1384650:intron | 45.0% | |
| AAAGCTTGCCTGGAGACATT+AGG | + | tig0020668:66704-66723 | None:intergenic | 45.0% | |
| !! | ACTTGCTCTGAGGCAACTAT+TGG | - | tig0020668:67026-67045 | Msa1384650:CDS | 45.0% |
| GAGATGTGCACAGTTAATCC+AGG | - | tig0020668:67248-67267 | Msa1384650:intron | 45.0% | |
| AGAAGCCCTGGATCTTGTAA+AGG | - | tig0020668:67722-67741 | Msa1384650:intron | 45.0% | |
| AAGGAGGCCATTAGTAGAAC+CGG | - | tig0020668:67741-67760 | Msa1384650:intron | 45.0% | |
| GAGCTCACGAACCTTCTATT+AGG | - | tig0020668:67936-67955 | Msa1384650:intron | 45.0% | |
| TCACGAACCTTCTATTAGGG+AGG | - | tig0020668:67940-67959 | Msa1384650:intron | 45.0% | |
| TTTCCCTCCCAAAAGGTAGA+GGG | - | tig0020668:68087-68106 | Msa1384650:intron | 45.0% | |
| !! | TAGAGAGTGCTCTAGTGAGA+GGG | - | tig0020668:68323-68342 | Msa1384650:intron | 45.0% |
| GTTACGGCAGTGTTATGAAC+TGG | - | tig0020668:68453-68472 | Msa1384650:CDS | 45.0% | |
| ATTCCGAAGTCTACCGCTAA+TGG | - | tig0020668:68604-68623 | Msa1384650:intron | 45.0% | |
| TCACCATTAGCGGTAGACTT+CGG | + | tig0020668:68610-68629 | None:intergenic | 45.0% | |
| GGTTGAAGCACAATGCGTAA+TGG | - | tig0020668:68814-68833 | Msa1384650:intron | 45.0% | |
| CTTGTGGTGAGATGTTTCAC+AGG | + | tig0020668:68989-69008 | None:intergenic | 45.0% | |
| CTGTGAAACATCTCACCACA+AGG | - | tig0020668:68987-69006 | Msa1384650:intron | 45.0% | |
| AAATTCTGTCCCGACGTTTG+AGG | + | tig0020668:69132-69151 | None:intergenic | 45.0% | |
| TGGTTGACCTGGATCACAAT+GGG | + | tig0020668:70533-70552 | None:intergenic | 45.0% | |
| TTGGTTGACCTGGATCACAA+TGG | + | tig0020668:70534-70553 | None:intergenic | 45.0% | |
| GGTCATTGAAGTGGTCAAAC+AGG | - | tig0020668:70571-70590 | Msa1384650:intron | 45.0% | |
| TGAAGTGGTCAAACAGGCAA+AGG | - | tig0020668:70577-70596 | Msa1384650:intron | 45.0% | |
| GCTGTTGGTCAGATTAAAGC+AGG | - | tig0020668:70680-70699 | Msa1384650:intron | 45.0% | |
| AAGGTTCACAATGCAATCCC+CGG | + | tig0020668:71030-71049 | None:intergenic | 45.0% | |
| ! | TGAGGAGTTCAACCCTTTTC+CGG | + | tig0020668:71250-71269 | None:intergenic | 45.0% |
| !! | CAGCCTATAATGGACTCATG+AGG | + | tig0020668:71268-71287 | None:intergenic | 45.0% |
| GGAGATCAAGCAGTTTATGC+TGG | - | tig0020668:71411-71430 | Msa1384650:intron | 45.0% | |
| !! | AATAAAATTGAATTATTATT+TGG | - | tig0020668:65762-65781 | Msa1384650:intron | 5.0% |
| !! | AAAATTAAAATTACAAAAAA+AGG | - | tig0020668:67306-67325 | Msa1384650:intron | 5.0% |
| !! | ATCAAAAATAAATAAATAAT+TGG | - | tig0020668:67355-67374 | Msa1384650:intron | 5.0% |
| !!! | AATTGATTTAAATAAATAAT+TGG | - | tig0020668:67386-67405 | Msa1384650:intron | 5.0% |
| ! | TGACGGCGTCTTCGAGTTTA+CGG | + | tig0020668:61938-61957 | None:intergenic | 50.0% |
| TACGATGAAGAGAACGGGGT+CGG | + | tig0020668:61985-62004 | None:intergenic | 50.0% | |
| GTTCCATCTGGAAACTCCAC+TGG | - | tig0020668:62217-62236 | Msa1384650:intron | 50.0% | |
| ATGCCAGTGGAGTTTCCAGA+TGG | + | tig0020668:62223-62242 | None:intergenic | 50.0% | |
| GCGGTCTTTGAACAAACCAC+TGG | - | tig0020668:63362-63381 | Msa1384650:intron | 50.0% | |
| !! | TCTGCTGAACTGTGCTGACT+CGG | - | tig0020668:63579-63598 | Msa1384650:intron | 50.0% |
| TTAGAACTGCCTGGCCAATG+TGG | - | tig0020668:63681-63700 | Msa1384650:intron | 50.0% | |
| AGGCTGTTGAGTTACGGGAT+GGG | - | tig0020668:63881-63900 | Msa1384650:intron | 50.0% | |
| !! | ATCTGAGGCGCTGATTGGTA+TGG | - | tig0020668:63966-63985 | Msa1384650:intron | 50.0% |
| ! | TCAATCTGGGACTGCAGTGT+TGG | + | tig0020668:63994-64013 | None:intergenic | 50.0% |
| TTGTTTGCAGGGGGAACTTG+GGG | - | tig0020668:64919-64938 | Msa1384650:intron | 50.0% | |
| CCCAGCTTTACATGCAGCAA+TGG | + | tig0020668:64966-64985 | None:intergenic | 50.0% | |
| TAAAGCTGGGGCTGCTGAAA+AGG | - | tig0020668:64976-64995 | Msa1384650:intron | 50.0% | |
| GGGCTGCTGAAAAGGAAGTA+TGG | - | tig0020668:64984-65003 | Msa1384650:intron | 50.0% | |
| TCAGCGATGTGCTTGTAGAG+TGG | + | tig0020668:65113-65132 | None:intergenic | 50.0% | |
| !! | AAGCAGGAACAGGAAGCACT+GGG | + | tig0020668:65154-65173 | None:intergenic | 50.0% |
| ! | AAAGCAGGAACAGGAAGCAC+TGG | + | tig0020668:65155-65174 | None:intergenic | 50.0% |
| ! | CTGCGTGACACTTTTAAGCC+AGG | + | tig0020668:65546-65565 | None:intergenic | 50.0% |
| ! | CCAAGAGTACGAAGAGAAGG+TGG | + | tig0020668:65825-65844 | None:intergenic | 50.0% |
| CCACCTTCTCTTCGTACTCT+TGG | - | tig0020668:65822-65841 | Msa1384650:intron | 50.0% | |
| ! | AGGCCAAGAGTACGAAGAGA+AGG | + | tig0020668:65828-65847 | None:intergenic | 50.0% |
| ATGCTAGACATGGGCACTTG+TGG | - | tig0020668:65967-65986 | Msa1384650:intron | 50.0% | |
| GGTTGCAGGAGTGAGTTCAT+CGG | - | tig0020668:65988-66007 | Msa1384650:intron | 50.0% | |
| ! | CAGGAGTGAGTTCATCGGTT+TGG | - | tig0020668:65993-66012 | Msa1384650:intron | 50.0% |
| ! | CCGTCATCCATCTCCCTTTT+TGG | + | tig0020668:66060-66079 | None:intergenic | 50.0% |
| GCTTTGCTCCTAATGTCTCC+AGG | - | tig0020668:66693-66712 | Msa1384650:CDS | 50.0% | |
| !! | ATCCAGGGCTTCTCTAAAGC+TGG | + | tig0020668:67715-67734 | None:intergenic | 50.0% |
| AGCCCTGGATCTTGTAAAGG+AGG | - | tig0020668:67725-67744 | Msa1384650:intron | 50.0% | |
| GGCCTCCTTTACAAGATCCA+GGG | + | tig0020668:67730-67749 | None:intergenic | 50.0% | |
| TGGCCTCCTTTACAAGATCC+AGG | + | tig0020668:67731-67750 | None:intergenic | 50.0% | |
| CTCTACCTTTCCCTCCCAAA+AGG | - | tig0020668:68080-68099 | Msa1384650:intron | 50.0% | |
| !! | CTCTACCTTTTGGGAGGGAA+AGG | + | tig0020668:68088-68107 | None:intergenic | 50.0% |
| CTTTCCCTCCCAAAAGGTAG+AGG | - | tig0020668:68086-68105 | Msa1384650:intron | 50.0% | |
| ! | GCAAGCACCCTCTACCTTTT+GGG | + | tig0020668:68097-68116 | None:intergenic | 50.0% |
| TGCTTGCCCCTACTACTGAT+AGG | - | tig0020668:68110-68129 | Msa1384650:intron | 50.0% | |
| ! | ATAACCTCACTTTGGGGAGC+TGG | - | tig0020668:68272-68291 | Msa1384650:CDS | 50.0% |
| !! | CTAGAGAGTGCTCTAGTGAG+AGG | - | tig0020668:68322-68341 | Msa1384650:intron | 50.0% |
| !! | AGAGAGTGCTCTAGTGAGAG+GGG | - | tig0020668:68324-68343 | Msa1384650:intron | 50.0% |
| GCCGTAACACAGTTTCTCCA+AGG | + | tig0020668:68441-68460 | None:intergenic | 50.0% | |
| CTCAAGCCTTGGAATTTGCC+AGG | - | tig0020668:69362-69381 | Msa1384650:intron | 50.0% | |
| ! | GAAGGGAAGTACATGAGAGG+AGG | + | tig0020668:70470-70489 | None:intergenic | 50.0% |
| GTGATCCAGGTCAACCAAGT+TGG | - | tig0020668:70536-70555 | Msa1384650:intron | 50.0% | |
| CAGTTCCAACTTGGTTGACC+TGG | + | tig0020668:70544-70563 | None:intergenic | 50.0% | |
| TGTGACCGAGGTCATTGAAG+TGG | - | tig0020668:70562-70581 | Msa1384650:intron | 50.0% | |
| ! | AACAGGCAAAGGAAGCGCAT+TGG | - | tig0020668:70588-70607 | Msa1384650:intron | 50.0% |
| ! | ACAGGCAAAGGAAGCGCATT+GGG | - | tig0020668:70589-70608 | Msa1384650:intron | 50.0% |
| GTGGTGACATCTCACAGAAG+TGG | - | tig0020668:70614-70633 | Msa1384650:intron | 50.0% | |
| !! | TTATCCGTTGGCCTTGCTGT+TGG | - | tig0020668:70665-70684 | Msa1384650:intron | 50.0% |
| TCTAATCGCTCTCCTCTGCA+AGG | + | tig0020668:70710-70729 | None:intergenic | 50.0% | |
| CTTCGGATTGAGGAAGAGCT+TGG | - | tig0020668:71390-71409 | Msa1384650:intron | 50.0% | |
| ! | GACGGCGTCTTCGAGTTTAC+GGG | + | tig0020668:61937-61956 | None:intergenic | 55.0% |
| !!! | GTCGGAGGTTTTGGCTCTGA+CGG | + | tig0020668:61967-61986 | None:intergenic | 55.0% |
| CTCAATCAGCCTGGCCACAT+TGG | + | tig0020668:63698-63717 | None:intergenic | 55.0% | |
| GAGGCTGTTGAGTTACGGGA+TGG | - | tig0020668:63880-63899 | Msa1384650:intron | 55.0% | |
| GGCTGTTGAGTTACGGGATG+GGG | - | tig0020668:63882-63901 | Msa1384650:intron | 55.0% | |
| GAGTTACGGGATGGGGACAA+AGG | - | tig0020668:63889-63908 | Msa1384650:intron | 55.0% | |
| GCAGCTTGACTCACCTAGTG+AGG | - | tig0020668:64180-64199 | Msa1384650:intron | 55.0% | |
| AAGCACATCGCTGACCTGTC+TGG | - | tig0020668:65119-65138 | Msa1384650:intron | 55.0% | |
| ACATGGGCACTTGTGGTTGC+AGG | - | tig0020668:65974-65993 | Msa1384650:intron | 55.0% | |
| !! | CACCAGCTTTAGAGAAGCCC+TGG | - | tig0020668:67710-67729 | Msa1384650:intron | 55.0% |
| AAGATCGCTCTTGACGTCGC+TGG | - | tig0020668:67780-67799 | Msa1384650:intron | 55.0% | |
| !! | GCACCCTCTACCTTTTGGGA+GGG | + | tig0020668:68093-68112 | None:intergenic | 55.0% |
| ! | AGCACCCTCTACCTTTTGGG+AGG | + | tig0020668:68094-68113 | None:intergenic | 55.0% |
| ! | GGCAAGCACCCTCTACCTTT+TGG | + | tig0020668:68098-68117 | None:intergenic | 55.0% |
| GAGAAAAGGGGTCTGTTCGC+CGG | + | tig0020668:68395-68414 | None:intergenic | 55.0% | |
| CCTCGGTCACAGTTCCAACT+TGG | + | tig0020668:70553-70572 | None:intergenic | 55.0% | |
| ! | CCAAGTTGGAACTGTGACCG+AGG | - | tig0020668:70550-70569 | Msa1384650:intron | 55.0% |
| ! | CAGGCAAAGGAAGCGCATTG+GGG | - | tig0020668:70590-70609 | Msa1384650:intron | 55.0% |
| ! | AGGCAAAGGAAGCGCATTGG+GGG | - | tig0020668:70591-70610 | Msa1384650:intron | 55.0% |
| CTGACCAACAGCAAGGCCAA+CGG | + | tig0020668:70672-70691 | None:intergenic | 55.0% | |
| !!! | GGAGGTTTTGGCTCTGACGG+CGG | + | tig0020668:61964-61983 | None:intergenic | 60.0% |
| ! | GAGAACGGGGTCGGAGGTTT+TGG | + | tig0020668:61976-61995 | None:intergenic | 60.0% |
| GATGAAGAGAACGGGGTCGG+AGG | + | tig0020668:61982-62001 | None:intergenic | 60.0% | |
| CCTCGGATCGCAGAAACCAG+TGG | + | tig0020668:63381-63400 | None:intergenic | 60.0% | |
| !! | CCACTGGTTTCTGCGATCCG+AGG | - | tig0020668:63378-63397 | Msa1384650:CDS | 60.0% |
| ACTGCCAGCTCCCCAAAGTG+AGG | + | tig0020668:68279-68298 | None:intergenic | 60.0% | |
| ! | GGCAAAGGAAGCGCATTGGG+GGG | - | tig0020668:70592-70611 | Msa1384650:intron | 60.0% |
| ! | AAAGGAAGCGCATTGGGGGG+TGG | - | tig0020668:70595-70614 | Msa1384650:intron | 60.0% |
| AAAGCAGGCGCTCCTTGCAG+AGG | - | tig0020668:70695-70714 | Msa1384650:intron | 60.0% | |
| CACGCGCTCGGAGATGAGAG+TGG | + | tig0020668:61842-61861 | None:intergenic | 65.0% | |
| ! | GGCTCTGACGGCGGCATTGA+CGG | + | tig0020668:61955-61974 | None:intergenic | 65.0% |
| ACTGCCTGGCCAATGTGGCC+AGG | - | tig0020668:63686-63705 | Msa1384650:intron | 65.0% | |
| TCAGCCTGGCCACATTGGCC+AGG | + | tig0020668:63693-63712 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020668 | gene | 61702 | 71738 | 61702 | ID=Msa1384650;Name=Msa1384650 |
| tig0020668 | mRNA | 61702 | 71738 | 61702 | ID=Msa1384650-mRNA-1;Parent=Msa1384650;Name=Msa1384650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=195|0.91|0.92|1|1|1|13|286|485 |
| tig0020668 | exon | 61702 | 62053 | 61702 | ID=Msa1384650-mRNA-1:exon:9194;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 62698 | 62895 | 62698 | ID=Msa1384650-mRNA-1:exon:9193;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 63366 | 63452 | 63366 | ID=Msa1384650-mRNA-1:exon:9192;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 64057 | 64142 | 64057 | ID=Msa1384650-mRNA-1:exon:9191;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 64242 | 64340 | 64242 | ID=Msa1384650-mRNA-1:exon:9190;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 65621 | 65724 | 65621 | ID=Msa1384650-mRNA-1:exon:9189;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 66690 | 66802 | 66690 | ID=Msa1384650-mRNA-1:exon:9188;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 67024 | 67104 | 67024 | ID=Msa1384650-mRNA-1:exon:9187;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 68217 | 68333 | 68217 | ID=Msa1384650-mRNA-1:exon:9186;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 68440 | 68511 | 68440 | ID=Msa1384650-mRNA-1:exon:9185;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 69390 | 69564 | 69390 | ID=Msa1384650-mRNA-1:exon:9184;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 71198 | 71352 | 71198 | ID=Msa1384650-mRNA-1:exon:9183;Parent=Msa1384650-mRNA-1 |
| tig0020668 | exon | 71439 | 71738 | 71439 | ID=Msa1384650-mRNA-1:exon:9182;Parent=Msa1384650-mRNA-1 |
| tig0020668 | five_prime_UTR | 71544 | 71738 | 71544 | ID=Msa1384650-mRNA-1:five_prime_utr;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 71439 | 71543 | 71439 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 71198 | 71352 | 71198 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 69390 | 69564 | 69390 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 68440 | 68511 | 68440 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 68217 | 68333 | 68217 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 67024 | 67104 | 67024 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 66690 | 66802 | 66690 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 65621 | 65724 | 65621 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 64242 | 64340 | 64242 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 64057 | 64142 | 64057 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 63366 | 63452 | 63366 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 62698 | 62895 | 62698 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | CDS | 61988 | 62053 | 61988 | ID=Msa1384650-mRNA-1:cds;Parent=Msa1384650-mRNA-1 |
| tig0020668 | three_prime_UTR | 61702 | 61987 | 61702 | ID=Msa1384650-mRNA-1:three_prime_utr;Parent=Msa1384650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
