Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825530 | XP_003617922.1 | 96.907 | 485 | 3 | 1 | 1 | 485 | 1 | 473 | 0.0 | 959 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825530 | sp|Q9ZW34|ENO3_ARATH | 80.165 | 484 | 84 | 1 | 1 | 484 | 1 | 472 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825530 | G7K4W1 | 96.907 | 485 | 3 | 1 | 1 | 485 | 1 | 473 | 0.0 | 959 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047070 | Msa0825530 | 0.822350 | 2.482476e-53 | -8.615850e-47 |
| Msa0094130 | Msa0825530 | 0.806308 | 8.761102e-50 | -8.615850e-47 |
| Msa0602880 | Msa0825530 | 0.804926 | 1.708132e-49 | -8.615850e-47 |
| Msa0626450 | Msa0825530 | 0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0658240 | Msa0825530 | 0.807126 | 5.887225e-50 | -8.615850e-47 |
| Msa0664600 | Msa0825530 | 0.801579 | 8.424877e-49 | -8.615850e-47 |
| Msa0747330 | Msa0825530 | 0.817494 | 3.203778e-52 | -8.615850e-47 |
| Msa0825530 | Msa0826570 | 0.805066 | 1.596935e-49 | -8.615850e-47 |
| Msa0825530 | Msa0846140 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0825530 | Msa0856050 | 0.811359 | 7.283377e-51 | -8.615850e-47 |
| Msa0825530 | Msa0873220 | 0.824864 | 6.407204e-54 | -8.615850e-47 |
| Msa0825530 | Msa0938480 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0825530 | Msa0945110 | 0.822817 | 1.933561e-53 | -8.615850e-47 |
| Msa0825530 | Msa0975640 | 0.817445 | 3.284795e-52 | -8.615850e-47 |
| Msa0825530 | Msa1021210 | 0.813886 | 2.039394e-51 | -8.615850e-47 |
| Msa0825530 | Msa1029250 | 0.825977 | 3.492486e-54 | -8.615850e-47 |
| Msa0825530 | Msa1059960 | 0.833937 | 4.002649e-56 | -8.615850e-47 |
| Msa0825530 | Msa1068190 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0825530 | Msa1105160 | 0.826884 | 2.123331e-54 | -8.615850e-47 |
| Msa0825530 | Msa1111130 | 0.810408 | 1.169945e-50 | -8.615850e-47 |
| Msa0825530 | Msa1113340 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0825530 | Msa1183120 | 0.805829 | 1.104806e-49 | -8.615850e-47 |
| Msa0825530 | Msa1199570 | 0.830289 | 3.192816e-55 | -8.615850e-47 |
| Msa0825530 | Msa1225700 | 0.813403 | 2.605791e-51 | -8.615850e-47 |
| Msa0825530 | Msa1252190 | 0.811913 | 5.520103e-51 | -8.615850e-47 |
| Msa0825530 | Msa1268670 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
| Msa0825530 | Msa1269480 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
| Msa0825530 | Msa1328710 | 0.833249 | 5.943488e-56 | -8.615850e-47 |
| Msa0825530 | Msa1369550 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa0825530 | Msa1384650 | 0.991073 | 9.387781e-186 | -8.615850e-47 |
| Msa0825530 | Msa1422420 | 0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0146260 | Msa0825530 | 0.801395 | 9.188548e-49 | -8.615850e-47 |
| Msa0146280 | Msa0825530 | 0.800122 | 1.671119e-48 | -8.615850e-47 |
| Msa0225460 | Msa0825530 | 0.824337 | 8.524203e-54 | -8.615850e-47 |
| Msa0225680 | Msa0825530 | 0.838551 | 2.688193e-57 | -8.615850e-47 |
| Msa0225750 | Msa0825530 | 0.809991 | 1.439221e-50 | -8.615850e-47 |
| Msa0388150 | Msa0825530 | 0.802971 | 4.355800e-49 | -8.615850e-47 |
| Msa0397150 | Msa0825530 | 0.815985 | 6.981438e-52 | -8.615850e-47 |
| Msa0410500 | Msa0825530 | 0.813152 | 2.957857e-51 | -8.615850e-47 |
| Msa0417880 | Msa0825530 | 0.809401 | 1.926753e-50 | -8.615850e-47 |
| Msa0428150 | Msa0825530 | 0.847266 | 1.289522e-59 | -8.615850e-47 |
| Msa0442830 | Msa0825530 | 0.801011 | 1.101137e-48 | -8.615850e-47 |
| Msa0462500 | Msa0825530 | 0.849667 | 2.790505e-60 | -8.615850e-47 |
| Msa0468290 | Msa0825530 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa0255090 | Msa0825530 | 0.837542 | 4.889727e-57 | -8.615850e-47 |
| Msa0259380 | Msa0825530 | 0.842307 | 2.801430e-58 | -8.615850e-47 |
| Msa0267110 | Msa0825530 | 0.804666 | 1.936314e-49 | -8.615850e-47 |
| Msa0294160 | Msa0825530 | 0.838102 | 3.510147e-57 | -8.615850e-47 |
| Msa0318700 | Msa0825530 | 0.835567 | 1.556971e-56 | -8.615850e-47 |
| Msa0348810 | Msa0825530 | 0.814710 | 1.341240e-51 | -8.615850e-47 |
| Msa0349710 | Msa0825530 | 0.821352 | 4.225619e-53 | -8.615850e-47 |
| Msa0532070 | Msa0825530 | 0.806796 | 6.913653e-50 | -8.615850e-47 |
| Msa0547900 | Msa0825530 | 0.803084 | 4.126981e-49 | -8.615850e-47 |
| Msa0569200 | Msa0825530 | 0.811116 | 8.222331e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825530 | MtrunA17_Chr5g0447301 | 98.905 | 274 | 3 | 0 | 1 | 274 | 1 | 274 | 0.0 | 557 |
| Msa0825530 | MtrunA17_Chr7g0265741 | 57.778 | 450 | 167 | 8 | 45 | 484 | 2 | 438 | 2.16e-177 | 505 |
| Msa0825530 | MtrunA17_Chr6g0476311 | 58.129 | 449 | 164 | 8 | 47 | 484 | 5 | 440 | 8.76e-177 | 503 |
| Msa0825530 | MtrunA17_Chr2g0307671 | 57.014 | 442 | 175 | 4 | 44 | 484 | 62 | 489 | 4.36e-174 | 498 |
| Msa0825530 | MtrunA17_Chr5g0447311 | 95.495 | 222 | 10 | 0 | 264 | 485 | 8 | 229 | 1.44e-154 | 438 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825530 | AT2G29560.1 | 80.165 | 484 | 84 | 1 | 1 | 484 | 1 | 472 | 0.0 | 809 |
| Msa0825530 | AT2G36530.1 | 57.428 | 451 | 169 | 8 | 45 | 485 | 2 | 439 | 5.98e-176 | 501 |
| Msa0825530 | AT1G74030.1 | 56.954 | 453 | 173 | 6 | 40 | 484 | 37 | 475 | 3.20e-174 | 498 |
| Msa0825530 | AT2G36530.2 | 56.512 | 430 | 164 | 8 | 66 | 485 | 12 | 428 | 7.88e-164 | 470 |
Find 125 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAACACACTGTAAAATTT+TGG | 0.177712 | 5_3:+65400754 | None:intergenic |
| GAGAACGGGGTCGGAGGTTT+TGG | 0.248202 | 5_3:+65410379 | None:intergenic |
| TGAGACCTATCATCATTTAA+AGG | 0.262267 | 5_3:-65405957 | Msa0825530:intron |
| CCTTGACAAAACAGAGAAAA+AGG | 0.305149 | 5_3:-65408323 | Msa0825530:intron |
| GGATCTTCTATTGATACAAT+TGG | 0.313466 | 5_3:+65403050 | None:intergenic |
| TTGTAATGCTCTTCTTCTTA+AGG | 0.320244 | 5_3:-65402300 | Msa0825530:intron |
| GGCTCTGACGGCGGCATTGA+CGG | 0.326530 | 5_3:+65410400 | None:intergenic |
| TGACGGCGTCTTCGAGTTTA+CGG | 0.335239 | 5_3:+65410417 | None:intergenic |
| ACAGGCAAAGGAAGCGCATT+GGG | 0.339363 | 5_3:-65401764 | Msa0825530:CDS |
| TCAAATCTGCTTGCTCCAAT+TGG | 0.357446 | 5_3:+65406001 | None:intergenic |
| CATTTCTACGATCGATTCTT+CGG | 0.368421 | 5_3:+65410475 | None:intergenic |
| TAAGAGATAACAATTTCTTC+AGG | 0.371235 | 5_3:-65400903 | Msa0825530:three_prime_UTR |
| ATCCATTTGACAAGGAAGAT+TGG | 0.376004 | 5_3:-65403031 | Msa0825530:CDS |
| TCCATTGCTGCATGTAAAGC+TGG | 0.377107 | 5_3:-65407390 | Msa0825530:CDS |
| TGAATGATTCTGCAGGTAGT+AGG | 0.386036 | 5_3:-65402380 | Msa0825530:intron |
| GTATGAGGCTGTTGAGTTAC+GGG | 0.389583 | 5_3:-65408476 | Msa0825530:CDS |
| ATCATAACCGGTTCTACTAA+TGG | 0.389720 | 5_3:+65404604 | None:intergenic |
| CAGTTTATGCTGGTGAAGAT+TGG | 0.398772 | 5_3:-65400932 | Msa0825530:CDS |
| TTTCGTGCTTCTGTTCCATC+TGG | 0.400465 | 5_3:-65410147 | Msa0825530:CDS |
| CTATCATAGCATGATCAATC+TGG | 0.408498 | 5_3:+65408347 | None:intergenic |
| AACTGTTTGACTGAGTGTTT+AGG | 0.408642 | 5_3:-65400707 | Msa0825530:three_prime_UTR |
| TCCATTTGACAAGGAAGATT+GGG | 0.410260 | 5_3:-65403030 | Msa0825530:CDS |
| AAATTCTGTCCCGACGTTTG+AGG | 0.413766 | 5_3:+65403224 | None:intergenic |
| GATGATTCATTTCAGGTATG+AGG | 0.417338 | 5_3:-65408491 | Msa0825530:intron |
| AAGCACATCGCTGACCTGTC+TGG | 0.418545 | 5_3:-65407233 | Msa0825530:CDS |
| TCCCAATCTTCCTTGTCAAA+TGG | 0.418960 | 5_3:+65403029 | None:intergenic |
| GGTATGAGGCTGTTGAGTTA+CGG | 0.423365 | 5_3:-65408477 | Msa0825530:CDS |
| TGGCCTCCTTTACAAGATCC+AGG | 0.431446 | 5_3:+65404624 | None:intergenic |
| TTCATAGCTGATTTATCCGT+TGG | 0.433997 | 5_3:-65401700 | Msa0825530:CDS |
| AAAGCTTGCCTGGAGACATT+AGG | 0.436617 | 5_3:+65405651 | None:intergenic |
| AACAGGTAAAAGATATGATC+TGG | 0.438662 | 5_3:-65403258 | Msa0825530:intron |
| GAAATCATGATTCTTCCAAT+TGG | 0.441103 | 5_3:-65406016 | Msa0825530:CDS |
| AAAACATGCTGGAAATAATC+TGG | 0.443130 | 5_3:-65407159 | Msa0825530:CDS |
| AATCACCTTTAAATGATGAT+AGG | 0.445742 | 5_3:+65405952 | None:intergenic |
| GATATTACGATGAAGAGAAC+GGG | 0.448791 | 5_3:+65410365 | None:intergenic |
| TAAAGCTGGGGCTGCTGAAA+AGG | 0.454878 | 5_3:-65407376 | Msa0825530:CDS |
| GATCTTCTATTGATACAATT+GGG | 0.456790 | 5_3:+65403051 | None:intergenic |
| GGTCATTGAAGTGGTCAAAC+AGG | 0.458747 | 5_3:-65401782 | Msa0825530:CDS |
| CTTCGGATTGAGGAAGAGCT+TGG | 0.459854 | 5_3:-65400963 | Msa0825530:CDS |
| CTCAAGCCTTGGAATTTGCC+AGG | 0.463723 | 5_3:-65402991 | Msa0825530:intron |
| GAATGATTCTGCAGGTAGTA+GGG | 0.464232 | 5_3:-65402379 | Msa0825530:intron |
| AAACAGTTGCTAAAATCTAA+TGG | 0.466487 | 5_3:+65400722 | None:intergenic |
| GGGGACAAAGGTGTATATCT+AGG | 0.471083 | 5_3:-65408451 | Msa0825530:CDS |
| ATCAAGTATATCTCAAGCCT+TGG | 0.478687 | 5_3:-65403002 | Msa0825530:CDS |
| CACCAGCTTTAGAGAAGCCC+TGG | 0.479064 | 5_3:-65404642 | Msa0825530:intron |
| AAGGAGGCCATTAGTAGAAC+CGG | 0.479320 | 5_3:-65404611 | Msa0825530:CDS |
| GACGGCGTCTTCGAGTTTAC+GGG | 0.479590 | 5_3:+65410418 | None:intergenic |
| AAAATATCTGAGGCGCTGAT+TGG | 0.482231 | 5_3:-65408391 | Msa0825530:CDS |
| TGGAAATAATCTGGCAATTG+AGG | 0.486178 | 5_3:-65407150 | Msa0825530:intron |
| CCATTGCTGCATGTAAAGCT+GGG | 0.490656 | 5_3:-65407389 | Msa0825530:CDS |
| AAAGCAGGAACAGGAAGCAC+TGG | 0.490991 | 5_3:+65407200 | None:intergenic |
| GATACAGTTACTTCGGATTG+AGG | 0.493277 | 5_3:-65400973 | Msa0825530:intron |
| GGCTGTTGAGTTACGGGATG+GGG | 0.493888 | 5_3:-65408470 | Msa0825530:CDS |
| AAAATCTAATGGCGCAATTG+AGG | 0.496254 | 5_3:+65400733 | None:intergenic |
| ATAACAGTAAAAGCAGGAAC+AGG | 0.498354 | 5_3:+65407191 | None:intergenic |
| CCTCGGTCACAGTTCCAACT+TGG | 0.498921 | 5_3:+65401803 | None:intergenic |
| TACAAATCAACTTCAACAGT+TGG | 0.502701 | 5_3:+65410186 | None:intergenic |
| GCTGTTGGTCAGATTAAAGC+AGG | 0.505927 | 5_3:-65401673 | Msa0825530:CDS |
| ATCTGAGGCGCTGATTGGTA+TGG | 0.509293 | 5_3:-65408386 | Msa0825530:CDS |
| GAAATTTGATACAGTTACTT+CGG | 0.514281 | 5_3:-65400980 | Msa0825530:intron |
| AACTGTAATGTCGGTGAAGA+TGG | 0.515053 | 5_3:-65405684 | Msa0825530:CDS |
| AAGATCGCTCTTGACGTCGC+TGG | 0.516723 | 5_3:-65404572 | Msa0825530:CDS |
| ATTTGATGAAGCACTGCGAA+TGG | 0.517360 | 5_3:-65405984 | Msa0825530:CDS |
| GCTTTGCTCCTAATGTCTCC+AGG | 0.523451 | 5_3:-65405659 | Msa0825530:CDS |
| GTTCCATCTGGAAACTCCAC+TGG | 0.529470 | 5_3:-65410135 | Msa0825530:CDS |
| TTTGATGAAGCACTGCGAAT+GGG | 0.531009 | 5_3:-65405983 | Msa0825530:CDS |
| CGTGAAAGCCTTTCTCAGAA+TGG | 0.532502 | 5_3:+65410627 | None:intergenic |
| TTTAAATCTCCTCAAACGTC+GGG | 0.533243 | 5_3:-65403233 | Msa0825530:CDS |
| TTTATGCTGGTGAAGATTGG+AGG | 0.538769 | 5_3:-65400929 | Msa0825530:CDS |
| AGGTAGGACCATTCTGAGAA+AGG | 0.539368 | 5_3:-65410635 | Msa0825530:five_prime_UTR |
| TTATCCGTTGGCCTTGCTGT+TGG | 0.541949 | 5_3:-65401688 | Msa0825530:CDS |
| AACAGGCAAAGGAAGCGCAT+TGG | 0.543307 | 5_3:-65401765 | Msa0825530:CDS |
| GGAGATCAAGCAGTTTATGC+TGG | 0.544508 | 5_3:-65400942 | Msa0825530:CDS |
| TCACCGACATTACAGTTATG+TGG | 0.549326 | 5_3:+65405690 | None:intergenic |
| TATCATAGCATGATCAATCT+GGG | 0.550616 | 5_3:+65408348 | None:intergenic |
| CTTTAAATCTCCTCAAACGT+CGG | 0.555208 | 5_3:-65403234 | Msa0825530:CDS |
| GTGATCCAGGTCAACCAAGT+TGG | 0.555500 | 5_3:-65401817 | Msa0825530:intron |
| TCTAATCGCTCTCCTCTGCA+AGG | 0.555562 | 5_3:+65401646 | None:intergenic |
| GGCCTCCTTTACAAGATCCA+GGG | 0.557045 | 5_3:+65404625 | None:intergenic |
| AAAGGTGTATATCTAGGAAA+CGG | 0.559992 | 5_3:-65408445 | Msa0825530:CDS |
| TCAATCTGGGACTGCAGTGT+TGG | 0.560963 | 5_3:+65408361 | None:intergenic |
| AGAAGCCCTGGATCTTGTAA+AGG | 0.562004 | 5_3:-65404630 | Msa0825530:CDS |
| ATAATACCTGGCAAATTCCA+AGG | 0.562772 | 5_3:+65402985 | None:intergenic |
| AGGCAAAGGAAGCGCATTGG+GGG | 0.571983 | 5_3:-65401762 | Msa0825530:CDS |
| AGGCTGTTGAGTTACGGGAT+GGG | 0.576344 | 5_3:-65408471 | Msa0825530:CDS |
| AGATATTACGATGAAGAGAA+CGG | 0.576440 | 5_3:+65410364 | None:intergenic |
| TGAAGTGGTCAAACAGGCAA+AGG | 0.579709 | 5_3:-65401776 | Msa0825530:CDS |
| GATGAAGAGAACGGGGTCGG+AGG | 0.585100 | 5_3:+65410373 | None:intergenic |
| CCAAGTTGGAACTGTGACCG+AGG | 0.585510 | 5_3:-65401803 | Msa0825530:CDS |
| ATAAGCGGTGGAAAACATGC+TGG | 0.585973 | 5_3:-65407170 | Msa0825530:CDS |
| ATGCCAGTGGAGTTTCCAGA+TGG | 0.588263 | 5_3:+65410132 | None:intergenic |
| TTTATCAAGATATTCTTGAA+CGG | 0.588908 | 5_3:+65410451 | None:intergenic |
| GAGGCTGTTGAGTTACGGGA+TGG | 0.592923 | 5_3:-65408472 | Msa0825530:CDS |
| CAGGCAAAGGAAGCGCATTG+GGG | 0.596386 | 5_3:-65401763 | Msa0825530:CDS |
| AATGATTCTGCAGGTAGTAG+GGG | 0.598973 | 5_3:-65402378 | Msa0825530:intron |
| TACGATGAAGAGAACGGGGT+CGG | 0.599870 | 5_3:+65410370 | None:intergenic |
| TTTGACCACTTCAATGACCT+CGG | 0.604404 | 5_3:+65401786 | None:intergenic |
| CCCAGCTTTACATGCAGCAA+TGG | 0.606579 | 5_3:+65407389 | None:intergenic |
| TCAGCGATGTGCTTGTAGAG+TGG | 0.606837 | 5_3:+65407242 | None:intergenic |
| GTGGTGACATCTCACAGAAG+TGG | 0.607193 | 5_3:-65401739 | Msa0825530:CDS |
| AAGCAGGAACAGGAAGCACT+GGG | 0.619719 | 5_3:+65407201 | None:intergenic |
| TTGTACAAGGAACTATGTAC+CGG | 0.620708 | 5_3:-65403176 | Msa0825530:intron |
| AGCCCTGGATCTTGTAAAGG+AGG | 0.621208 | 5_3:-65404627 | Msa0825530:CDS |
| GAGTTACGGGATGGGGACAA+AGG | 0.621649 | 5_3:-65408463 | Msa0825530:CDS |
| GAATACGACGACGTTTAACA+AGG | 0.623272 | 5_3:-65410655 | None:intergenic |
| CCGCTTATAACAGTAAAAGC+AGG | 0.623476 | 5_3:+65407185 | None:intergenic |
| AGGCAAATTCTTGATAGTAG+AGG | 0.625871 | 5_3:-65410213 | Msa0825530:CDS |
| CATTGCTGCATGTAAAGCTG+GGG | 0.626891 | 5_3:-65407388 | Msa0825530:CDS |
| CACGCGCTCGGAGATGAGAG+TGG | 0.636109 | 5_3:+65410513 | None:intergenic |
| AAAGCAGGCGCTCCTTGCAG+AGG | 0.636542 | 5_3:-65401658 | Msa0825530:CDS |
| TGTGACCGAGGTCATTGAAG+TGG | 0.639474 | 5_3:-65401791 | Msa0825530:CDS |
| ATTAACATCTTACATGCCAG+TGG | 0.640506 | 5_3:+65410119 | None:intergenic |
| TATAAATGAGAAAATATCTG+AGG | 0.641810 | 5_3:-65408401 | Msa0825530:CDS |
| CTTTAATCTGACCAACAGCA+AGG | 0.642755 | 5_3:+65401677 | None:intergenic |
| TGATGAAATGAATGAGGTCA+AGG | 0.644784 | 5_3:+65410536 | None:intergenic |
| GGCAAAGGAAGCGCATTGGG+GGG | 0.654274 | 5_3:-65401761 | Msa0825530:CDS |
| GGATATGATAGAATTGTACA+AGG | 0.666629 | 5_3:-65403189 | Msa0825530:CDS |
| GAGTGGTGATGAAATGAATG+AGG | 0.671810 | 5_3:+65410530 | None:intergenic |
| ACGACGACGTTTAACAAGGT+AGG | 0.672274 | 5_3:-65410651 | Msa0825530:five_prime_UTR |
| TGATTACGAAAGTAAAAGCG+AGG | 0.674184 | 5_3:-65410233 | Msa0825530:CDS |
| CTGACCAACAGCAAGGCCAA+CGG | 0.676271 | 5_3:+65401684 | None:intergenic |
| AATAGAAGATCCATTTGACA+AGG | 0.686135 | 5_3:-65403039 | Msa0825530:CDS |
| GGGCCACATAACTGTAATGT+CGG | 0.693032 | 5_3:-65405693 | Msa0825530:CDS |
| TGTAATGTCGGTGAAGATGG+TGG | 0.702441 | 5_3:-65405681 | Msa0825530:CDS |
| ATATTACGATGAAGAGAACG+GGG | 0.743082 | 5_3:+65410366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACGAAAAAATAAATTAA+CGG | + | chr5_3:65404521-65404540 | None:intergenic | 10.0% |
| !!! | TTTTAAATGAATATATGAAA+TGG | - | chr5_3:65405704-65405723 | Msa0825530:CDS | 10.0% |
| !!! | GTTTAATTTTTAAAAAAGTA+GGG | + | chr5_3:65409748-65409767 | None:intergenic | 10.0% |
| !!! | AATCTAAAATAGTTTATGTT+TGG | - | chr5_3:65401698-65401717 | Msa0825530:CDS | 15.0% |
| !! | AGAAAATTACTAATAAAAGA+GGG | - | chr5_3:65402013-65402032 | Msa0825530:intron | 15.0% |
| !!! | TTGTTCTTTGAAAATTAATT+TGG | - | chr5_3:65402222-65402241 | Msa0825530:intron | 15.0% |
| !! | TTATTGATCAATTATAGAAT+TGG | - | chr5_3:65402751-65402770 | Msa0825530:intron | 15.0% |
| !! | GATAAATGTTATAGTAAAAT+TGG | + | chr5_3:65403362-65403381 | None:intergenic | 15.0% |
| !! | ACATTTATCAATAATAAAGT+TGG | - | chr5_3:65403373-65403392 | Msa0825530:intron | 15.0% |
| !! | CATTTATCAATAATAAAGTT+GGG | - | chr5_3:65403374-65403393 | Msa0825530:intron | 15.0% |
| !!! | TTTTCATTTAAAGTTTAATC+TGG | - | chr5_3:65403962-65403981 | Msa0825530:intron | 15.0% |
| !! | TCTAAAAACAAAAAATTATC+AGG | - | chr5_3:65404020-65404039 | Msa0825530:intron | 15.0% |
| !! | AAACTAATTATAAAACAACT+TGG | - | chr5_3:65404317-65404336 | Msa0825530:intron | 15.0% |
| !! | AACTAATTATAAAACAACTT+GGG | - | chr5_3:65404318-65404337 | Msa0825530:intron | 15.0% |
| !! | AAAACAAAAACTGAAAAAAT+AGG | + | chr5_3:65405384-65405403 | None:intergenic | 15.0% |
| !! | GAAAAATGTTCAAAATTATA+CGG | - | chr5_3:65406160-65406179 | Msa0825530:intron | 15.0% |
| !! | AAAAATGTTCAAAATTATAC+GGG | - | chr5_3:65406161-65406180 | Msa0825530:intron | 15.0% |
| !!! | AATAATTGGTTCATAATAAT+TGG | - | chr5_3:65406304-65406323 | Msa0825530:intron | 15.0% |
| !!! | TCTAATTTAATATTTTTGAG+TGG | - | chr5_3:65406440-65406459 | Msa0825530:intron | 15.0% |
| !!! | TAGAAGTAATTATTTTAGAA+TGG | + | chr5_3:65406569-65406588 | None:intergenic | 15.0% |
| !! | AAAAAAATAAATATGCAGTA+AGG | + | chr5_3:65408189-65408208 | None:intergenic | 15.0% |
| !!! | TTGAAAAGTTAACATTTTAT+TGG | - | chr5_3:65408328-65408347 | Msa0825530:CDS | 15.0% |
| !!! | TTCTTTTATGCTATTATTAT+TGG | - | chr5_3:65408426-65408445 | Msa0825530:CDS | 15.0% |
| !! | AGCATTTATATGATAAAAAA+TGG | + | chr5_3:65409107-65409126 | None:intergenic | 15.0% |
| !!! | GGTTTAATTTTTAAAAAAGT+AGG | + | chr5_3:65409749-65409768 | None:intergenic | 15.0% |
| !! | TCATAAATAAAAAATGAACA+TGG | - | chr5_3:65410130-65410149 | Msa0825530:intron | 15.0% |
| !! | TTTATCAAGATATTCTTGAA+CGG | + | chr5_3:65400839-65400858 | None:intergenic | 20.0% |
| !! | ATAAGAAAACTACAAACTAT+AGG | - | chr5_3:65401452-65401471 | Msa0825530:intron | 20.0% |
| !!! | TATTATGGTTTAATTGATTC+TGG | + | chr5_3:65401538-65401557 | None:intergenic | 20.0% |
| !! | AATTAAACCATAATAACTAG+CGG | - | chr5_3:65401543-65401562 | Msa0825530:intron | 20.0% |
| !!! | GTCTATTATATTAGTCATTT+TGG | - | chr5_3:65401923-65401942 | Msa0825530:intron | 20.0% |
| !! | CAGAAAATTACTAATAAAAG+AGG | - | chr5_3:65402012-65402031 | Msa0825530:intron | 20.0% |
| !!! | ACAATTATTTTTGTTCATGA+AGG | + | chr5_3:65402090-65402109 | None:intergenic | 20.0% |
| !! | TATAAATGAGAAAATATCTG+AGG | - | chr5_3:65402886-65402905 | Msa0825530:intron | 20.0% |
| !! | TTATTGTTCATAACATATGT+AGG | + | chr5_3:65403741-65403760 | None:intergenic | 20.0% |
| !! | ACTAATTATAAAACAACTTG+GGG | - | chr5_3:65404319-65404338 | Msa0825530:intron | 20.0% |
| !! | AAGATAATAATGAGGTTATT+TGG | + | chr5_3:65404735-65404754 | None:intergenic | 20.0% |
| !! | AACATAATCAATTTCAACAA+GGG | + | chr5_3:65405130-65405149 | None:intergenic | 20.0% |
| !! | ATAGTAACTATACTTATTGA+TGG | + | chr5_3:65405170-65405189 | None:intergenic | 20.0% |
| !!! | ATAAATCTGTTTTAGAAGAA+AGG | - | chr5_3:65405729-65405748 | Msa0825530:intron | 20.0% |
| !!! | GTAGGGTATTTTTTAAATTA+AGG | - | chr5_3:65406103-65406122 | Msa0825530:intron | 20.0% |
| !! | TAAAATTACAAAAAAAGGCA+TGG | - | chr5_3:65406246-65406265 | Msa0825530:intron | 20.0% |
| !!! | AAAATGATGTTTATAATGGA+AGG | + | chr5_3:65406961-65406980 | None:intergenic | 20.0% |
| !! | AGAGAAAATGATGTTTATAA+TGG | + | chr5_3:65406965-65406984 | None:intergenic | 20.0% |
| !! | AGAGTTTATTATAGAAAAAG+AGG | - | chr5_3:65407074-65407093 | Msa0825530:intron | 20.0% |
| !! | AAAGGTAAGAAAATAATTGA+AGG | - | chr5_3:65407712-65407731 | Msa0825530:intron | 20.0% |
| !! | CGAGTCATTAATTAATTTAA+TGG | - | chr5_3:65407843-65407862 | Msa0825530:intron | 20.0% |
| !! | GAGGTTGTTATAAATTATTT+AGG | - | chr5_3:65408163-65408182 | Msa0825530:intron | 20.0% |
| !!! | ACTTTTCAATAAATAATACC+TGG | + | chr5_3:65408317-65408336 | None:intergenic | 20.0% |
| !! | GTAACATTAAACTTTGAATT+TGG | - | chr5_3:65408537-65408556 | Msa0825530:intron | 20.0% |
| !!! | TTTTTAAGTGTCGATTTTTT+AGG | + | chr5_3:65408586-65408605 | None:intergenic | 20.0% |
| !! | ACACTTAAAAAAGAAAGATA+TGG | - | chr5_3:65408595-65408614 | Msa0825530:intron | 20.0% |
| !! | AATGAAAACTAATAACAAAC+AGG | - | chr5_3:65408719-65408738 | Msa0825530:intron | 20.0% |
| !!! | AATGCTAAATTTTTTGTTGA+TGG | - | chr5_3:65409121-65409140 | Msa0825530:intron | 20.0% |
| !!! | TTTTCTTCAACAAAATAGAA+GGG | + | chr5_3:65409421-65409440 | None:intergenic | 20.0% |
| !! | TTTCTTCAATAAACAAAAAC+CGG | - | chr5_3:65409942-65409961 | Msa0825530:intron | 20.0% |
| !! | TATGAAAAAAGGAGTACAAT+CGG | - | chr5_3:65401031-65401050 | Msa0825530:intron | 25.0% |
| !! | ATGTTGATTATGTGCATATT+TGG | - | chr5_3:65401294-65401313 | Msa0825530:intron | 25.0% |
| ! | AATGTGAAGTGATTTATGTT+TGG | - | chr5_3:65401371-65401390 | Msa0825530:intron | 25.0% |
| ! | CAAGTTAGAATTGATTATAC+TGG | - | chr5_3:65401477-65401496 | Msa0825530:intron | 25.0% |
| ! | ATTAAACCATAATAACTAGC+GGG | - | chr5_3:65401544-65401563 | Msa0825530:intron | 25.0% |
| ! | ACTAATATAATAGACACCTA+TGG | + | chr5_3:65401918-65401937 | None:intergenic | 25.0% |
| !!! | ATATTAGTCATTTTGGTCAT+TGG | - | chr5_3:65401930-65401949 | Msa0825530:intron | 25.0% |
| ! | TTTGCGATTTCAATACATTT+AGG | - | chr5_3:65402048-65402067 | Msa0825530:intron | 25.0% |
| ! | TTGCGATTTCAATACATTTA+GGG | - | chr5_3:65402049-65402068 | Msa0825530:intron | 25.0% |
| ! | GTTTGCTTAATTGTGTATAT+TGG | - | chr5_3:65402108-65402127 | Msa0825530:intron | 25.0% |
| !!! | ATGTCACATTTTAAGACAAT+TGG | - | chr5_3:65403072-65403091 | Msa0825530:intron | 25.0% |
| ! | ATAAGTAAGTAACTCAGTTA+GGG | - | chr5_3:65403417-65403436 | Msa0825530:intron | 25.0% |
| ! | TGTTCTATTCTCAAATAACA+AGG | - | chr5_3:65403467-65403486 | Msa0825530:intron | 25.0% |
| ! | AGGTTAGTATGAGAATATTA+TGG | - | chr5_3:65403499-65403518 | Msa0825530:intron | 25.0% |
| ! | GTTCAAAACGGATATTATAA+AGG | - | chr5_3:65403540-65403559 | Msa0825530:intron | 25.0% |
| ! | AAAGGATTTGAATTTCAGTA+AGG | - | chr5_3:65403558-65403577 | Msa0825530:intron | 25.0% |
| ! | TAAATATTTCCGCATTCAAT+GGG | + | chr5_3:65404288-65404307 | None:intergenic | 25.0% |
| ! | ATAAATATTTCCGCATTCAA+TGG | + | chr5_3:65404289-65404308 | None:intergenic | 25.0% |
| !!! | AGTTCTTTGTTGTTTAACTT+TGG | - | chr5_3:65404375-65404394 | Msa0825530:intron | 25.0% |
| ! | GAGGTTATTTGGAAAAAAAT+TGG | + | chr5_3:65404724-65404743 | None:intergenic | 25.0% |
| ! | AAAATCCAAATGCAAATTCA+AGG | + | chr5_3:65404783-65404802 | None:intergenic | 25.0% |
| ! | GTTGTAATACTTGAAGATAT+AGG | - | chr5_3:65404803-65404822 | Msa0825530:intron | 25.0% |
| ! | GAACATAATCAATTTCAACA+AGG | + | chr5_3:65405131-65405150 | None:intergenic | 25.0% |
| !! | CTATACTTATTGATGGTTAA+AGG | + | chr5_3:65405163-65405182 | None:intergenic | 25.0% |
| ! | CTTTCTTACATTATTGTTAC+AGG | - | chr5_3:65405249-65405268 | Msa0825530:intron | 25.0% |
| ! | AATCACCTTTAAATGATGAT+AGG | + | chr5_3:65405338-65405357 | None:intergenic | 25.0% |
| ! | AACTGAAAAAATAGGATAGT+GGG | + | chr5_3:65405376-65405395 | None:intergenic | 25.0% |
| ! | AAACTGAAAAAATAGGATAG+TGG | + | chr5_3:65405377-65405396 | None:intergenic | 25.0% |
| !!! | TATTTGTTGTTCATGACAAA+AGG | - | chr5_3:65405546-65405565 | Msa0825530:intron | 25.0% |
| !!! | ATTTGTTGTTCATGACAAAA+GGG | - | chr5_3:65405547-65405566 | Msa0825530:intron | 25.0% |
| ! | CTGTTATTACAGAAAAATGT+GGG | - | chr5_3:65405574-65405593 | Msa0825530:intron | 25.0% |
| !! | GCTTTTTATCTTAAACTCTT+TGG | - | chr5_3:65405654-65405673 | Msa0825530:CDS | 25.0% |
| ! | GAAAAAAATATCTCCAAAAC+TGG | - | chr5_3:65405755-65405774 | Msa0825530:intron | 25.0% |
| !! | AATACTGTATAAACCAGTTT+TGG | + | chr5_3:65405771-65405790 | None:intergenic | 25.0% |
| ! | ATTAGAGTCAACAATTAAGT+TGG | - | chr5_3:65405808-65405827 | Msa0825530:intron | 25.0% |
| ! | TGTTGGAAATATAAGATCTA+TGG | - | chr5_3:65405874-65405893 | Msa0825530:intron | 25.0% |
| ! | TCTTAAGAGTAATTAAGTCT+TGG | + | chr5_3:65406412-65406431 | None:intergenic | 25.0% |
| !!! | CTTTATTTTCTCATCATAAC+CGG | + | chr5_3:65406698-65406717 | None:intergenic | 25.0% |
| !!! | GTACTTTTCTGTTTCTTATT+TGG | - | chr5_3:65406765-65406784 | Msa0825530:intron | 25.0% |
| ! | TCTTATAATGAGAAACTGTT+AGG | - | chr5_3:65406849-65406868 | Msa0825530:intron | 25.0% |
| ! | TTGCAAACTCTTAATTACTT+AGG | - | chr5_3:65407102-65407121 | Msa0825530:intron | 25.0% |
| !!! | AGTTCTTTGTTTTGTTTGTT+AGG | - | chr5_3:65407131-65407150 | Msa0825530:intron | 25.0% |
| ! | TTATCCCTATTATAATACGT+AGG | + | chr5_3:65407191-65407210 | None:intergenic | 25.0% |
| !! | GTATAGTTTATTGATAGCAA+TGG | + | chr5_3:65407308-65407327 | None:intergenic | 25.0% |
| ! | TTGCTATCAATAAACTATAC+CGG | - | chr5_3:65407308-65407327 | Msa0825530:intron | 25.0% |
| ! | ACCTTCAAAATTAGAGAAAA+GGG | + | chr5_3:65407343-65407362 | None:intergenic | 25.0% |
| ! | AACCTTCAAAATTAGAGAAA+AGG | + | chr5_3:65407344-65407363 | None:intergenic | 25.0% |
| !!! | TTTCTCTAATTTTGAAGGTT+AGG | - | chr5_3:65407344-65407363 | Msa0825530:intron | 25.0% |
| !!! | GGGATTGATTTTGTTATTTT+TGG | - | chr5_3:65407640-65407659 | Msa0825530:intron | 25.0% |
| ! | AATTTAGTGAGACAGAATTA+AGG | - | chr5_3:65407684-65407703 | Msa0825530:intron | 25.0% |
| ! | ATTGAAGGTAAAAAGTTTGT+AGG | - | chr5_3:65407727-65407746 | Msa0825530:intron | 25.0% |
| !! | CATATCTTTTACCTGTTTTA+GGG | + | chr5_3:65408026-65408045 | None:intergenic | 25.0% |
| !! | TCATATCTTTTACCTGTTTT+AGG | + | chr5_3:65408027-65408046 | None:intergenic | 25.0% |
| ! | GATCTTCTATTGATACAATT+GGG | + | chr5_3:65408239-65408258 | None:intergenic | 25.0% |
| !!! | GAATAAAAAGCATCAATCTT+TGG | + | chr5_3:65408659-65408678 | None:intergenic | 25.0% |
| ! | ATTAACATGTTAGGTAAGAA+AGG | - | chr5_3:65408771-65408790 | Msa0825530:intron | 25.0% |
| ! | TTAACATGTTAGGTAAGAAA+GGG | - | chr5_3:65408772-65408791 | Msa0825530:intron | 25.0% |
| !! | ATCTATTTGTTAGCTTACAT+TGG | - | chr5_3:65408816-65408835 | Msa0825530:intron | 25.0% |
| !! | TCTATTTGTTAGCTTACATT+GGG | - | chr5_3:65408817-65408836 | Msa0825530:intron | 25.0% |
| ! | TGCAGAATCATTCAAATTAA+GGG | + | chr5_3:65408901-65408920 | None:intergenic | 25.0% |
| ! | TATTGTTTCAATGAACTTTC+AGG | - | chr5_3:65409018-65409037 | Msa0825530:intron | 25.0% |
| ! | ATTGTTTCAATGAACTTTCA+GGG | - | chr5_3:65409019-65409038 | Msa0825530:intron | 25.0% |
| !! | CTTTTCTTCAACAAAATAGA+AGG | + | chr5_3:65409422-65409441 | None:intergenic | 25.0% |
| ! | AGAAAAGAAACATGAAAATG+TGG | - | chr5_3:65409435-65409454 | Msa0825530:intron | 25.0% |
| !! | GGTTTTACAGTTATAGATTA+TGG | - | chr5_3:65409702-65409721 | Msa0825530:intron | 25.0% |
| !!! | AACTGACAACATTTTTTCAT+GGG | + | chr5_3:65409775-65409794 | None:intergenic | 25.0% |
| !!! | AAACTGACAACATTTTTTCA+TGG | + | chr5_3:65409776-65409795 | None:intergenic | 25.0% |
| ! | TTATACATTCACAATGTATG+TGG | - | chr5_3:65409806-65409825 | Msa0825530:intron | 25.0% |
| ! | TATACATTCACAATGTATGT+GGG | - | chr5_3:65409807-65409826 | Msa0825530:intron | 25.0% |
| ! | TTCTTCAATAAACAAAAACC+GGG | - | chr5_3:65409943-65409962 | Msa0825530:intron | 25.0% |
| !!! | TATTTTTTTCTTGTTTGTCC+TGG | - | chr5_3:65410083-65410102 | Msa0825530:intron | 25.0% |
| ! | GAAATTTGATACAGTTACTT+CGG | - | chr5_3:65410307-65410326 | Msa0825530:intron | 25.0% |
| ! | TAAGAGATAACAATTTCTTC+AGG | - | chr5_3:65410384-65410403 | Msa0825530:CDS | 25.0% |
| ! | AAACAGTTGCTAAAATCTAA+TGG | + | chr5_3:65410568-65410587 | None:intergenic | 25.0% |
| ! | AAAATGCAGCTTAAAAATTG+TGG | - | chr5_3:65410617-65410636 | Msa0825530:five_prime_UTR | 25.0% |
| ! | TCAACGAATCAAAAAATTTG+TGG | - | chr5_3:65410646-65410665 | Msa0825530:five_prime_UTR | 25.0% |
| ! | CAACGAATCAAAAAATTTGT+GGG | - | chr5_3:65410647-65410666 | Msa0825530:five_prime_UTR | 25.0% |
| AGATATTACGATGAAGAGAA+CGG | + | chr5_3:65400926-65400945 | None:intergenic | 30.0% | |
| CAGTCGAATCATATGAAAAA+AGG | - | chr5_3:65401020-65401039 | Msa0825530:intron | 30.0% | |
| TACAAATCAACTTCAACAGT+TGG | + | chr5_3:65401104-65401123 | None:intergenic | 30.0% | |
| GAAGTGATTTATGTTTGGAT+AGG | - | chr5_3:65401376-65401395 | Msa0825530:intron | 30.0% | |
| TTAAACCATAATAACTAGCG+GGG | - | chr5_3:65401545-65401564 | Msa0825530:intron | 30.0% | |
| ! | TTTTGATATGTTACTGTGTG+AGG | - | chr5_3:65401574-65401593 | Msa0825530:intron | 30.0% |
| TCGATGAATGTGTATAAGTT+TGG | - | chr5_3:65401614-65401633 | Msa0825530:intron | 30.0% | |
| AACTTGAAGCTAGAATTTGT+AGG | + | chr5_3:65401789-65401808 | None:intergenic | 30.0% | |
| ! | ATGGATGTGTTTTCAATGTT+AGG | + | chr5_3:65401899-65401918 | None:intergenic | 30.0% |
| AACATTGAAAACACATCCAT+AGG | - | chr5_3:65401899-65401918 | Msa0825530:intron | 30.0% | |
| !! | TGGTCATTGGATCTATTTTT+AGG | - | chr5_3:65401943-65401962 | Msa0825530:intron | 30.0% |
| ! | TTTTCGAATGTGTATTTCGT+TGG | - | chr5_3:65401978-65401997 | Msa0825530:intron | 30.0% |
| ATTACTAATAAAAGAGGGAC+TGG | - | chr5_3:65402018-65402037 | Msa0825530:intron | 30.0% | |
| TTACTAATAAAAGAGGGACT+GGG | - | chr5_3:65402019-65402038 | Msa0825530:intron | 30.0% | |
| !! | TGCAAAGTTTTGTCAAATAG+AGG | - | chr5_3:65402245-65402264 | Msa0825530:intron | 30.0% |
| ATAAGAGAATCACCTAAACA+GGG | + | chr5_3:65402672-65402691 | None:intergenic | 30.0% | |
| AATAAGAGAATCACCTAAAC+AGG | + | chr5_3:65402673-65402692 | None:intergenic | 30.0% | |
| TGTTTAGGTGATTCTCTTAT+TGG | - | chr5_3:65402672-65402691 | Msa0825530:intron | 30.0% | |
| GTTTAGGTGATTCTCTTATT+GGG | - | chr5_3:65402673-65402692 | Msa0825530:intron | 30.0% | |
| ! | TTGGATTAACATTGACTGTT+CGG | - | chr5_3:65402770-65402789 | Msa0825530:intron | 30.0% |
| ! | AAAGGTGTATATCTAGGAAA+CGG | - | chr5_3:65402842-65402861 | Msa0825530:intron | 30.0% |
| TATCATAGCATGATCAATCT+GGG | + | chr5_3:65402942-65402961 | None:intergenic | 30.0% | |
| TATTTCAACATCTTTCTGCT+GGG | - | chr5_3:65402987-65403006 | Msa0825530:intron | 30.0% | |
| TGACATAACGATACACAATA+TGG | + | chr5_3:65403041-65403060 | None:intergenic | 30.0% | |
| AGCATTCTTTAGTATAGTGA+TGG | - | chr5_3:65403192-65403211 | Msa0825530:CDS | 30.0% | |
| GCATTCTTTAGTATAGTGAT+GGG | - | chr5_3:65403193-65403212 | Msa0825530:CDS | 30.0% | |
| CATAAGTAAGTAACTCAGTT+AGG | - | chr5_3:65403416-65403435 | Msa0825530:intron | 30.0% | |
| AAATAACAAGGTGCATACTT+AGG | - | chr5_3:65403479-65403498 | Msa0825530:intron | 30.0% | |
| GAATATTATGGCTGTTAGAA+AGG | - | chr5_3:65403511-65403530 | Msa0825530:intron | 30.0% | |
| GATTTGAATTTCAGTAAGGT+GGG | - | chr5_3:65403562-65403581 | Msa0825530:intron | 30.0% | |
| AGTCTGAGTCAATAATTCTT+AGG | - | chr5_3:65403715-65403734 | Msa0825530:intron | 30.0% | |
| !! | TGTTTCTGATTTTTGTTTGC+AGG | - | chr5_3:65403842-65403861 | Msa0825530:intron | 30.0% |
| !! | GTTTCTGATTTTTGTTTGCA+GGG | - | chr5_3:65403843-65403862 | Msa0825530:intron | 30.0% |
| !! | TTTCTGATTTTTGTTTGCAG+GGG | - | chr5_3:65403844-65403863 | Msa0825530:intron | 30.0% |
| AAAACATGCTGGAAATAATC+TGG | - | chr5_3:65404128-65404147 | Msa0825530:intron | 30.0% | |
| CATAACTCATAAGTGTCTAT+AGG | + | chr5_3:65404230-65404249 | None:intergenic | 30.0% | |
| ! | TGTTGTTTAACTTTGGAAGT+TGG | - | chr5_3:65404382-65404401 | Msa0825530:intron | 30.0% |
| ACCTATCATAATATAACACC+TGG | - | chr5_3:65404460-65404479 | Msa0825530:intron | 30.0% | |
| CTTCTATAGTGATTGTTGAA+GGG | + | chr5_3:65404544-65404563 | None:intergenic | 30.0% | |
| AGGTGGAAAAGATAATAATG+AGG | + | chr5_3:65404743-65404762 | None:intergenic | 30.0% | |
| CTGTATTATGAAACTGTTTG+AGG | - | chr5_3:65404848-65404867 | Msa0825530:intron | 30.0% | |
| ATGAAATTGTTGAGTTAGTG+TGG | + | chr5_3:65404884-65404903 | None:intergenic | 30.0% | |
| AACAATTTCATGCTAGACAT+GGG | - | chr5_3:65404893-65404912 | Msa0825530:intron | 30.0% | |
| AGGTCCAATAAAAACCAAAA+AGG | - | chr5_3:65404978-65404997 | Msa0825530:intron | 30.0% | |
| GGTCCAATAAAAACCAAAAA+GGG | - | chr5_3:65404979-65404998 | Msa0825530:intron | 30.0% | |
| !!! | TCTCCCTTTTTGGTTTTTAT+TGG | + | chr5_3:65404985-65405004 | None:intergenic | 30.0% |
| ATAAAAACCAAAAAGGGAGA+TGG | - | chr5_3:65404985-65405004 | Msa0825530:intron | 30.0% | |
| ACTGTTATCCTACAAAAACT+TGG | + | chr5_3:65405072-65405091 | None:intergenic | 30.0% | |
| GAAATCATGATTCTTCCAAT+TGG | - | chr5_3:65405271-65405290 | Msa0825530:intron | 30.0% | |
| TGAGACCTATCATCATTTAA+AGG | - | chr5_3:65405330-65405349 | Msa0825530:intron | 30.0% | |
| ! | ACTTGATAATATTCGAGCAT+GGG | + | chr5_3:65405452-65405471 | None:intergenic | 30.0% |
| ! | AACTTGATAATATTCGAGCA+TGG | + | chr5_3:65405453-65405472 | None:intergenic | 30.0% |
| CAGCTCTATTACAATGATTA+AGG | - | chr5_3:65405491-65405510 | Msa0825530:intron | 30.0% | |
| AGCTTAAACAACATATCTCA+GGG | + | chr5_3:65405518-65405537 | None:intergenic | 30.0% | |
| GCTGTTATTACAGAAAAATG+TGG | - | chr5_3:65405573-65405592 | Msa0825530:intron | 30.0% | |
| ! | TTTAAGATAAAAAGCTTGCC+TGG | + | chr5_3:65405649-65405668 | None:intergenic | 30.0% |
| !! | TCTTTTACTCTCTGATTTGT+TGG | - | chr5_3:65405857-65405876 | Msa0825530:intron | 30.0% |
| AGTACTCCTATTACAACTAT+TGG | - | chr5_3:65406007-65406026 | Msa0825530:CDS | 30.0% | |
| AAATACCCTACAAATGCATA+GGG | + | chr5_3:65406094-65406113 | None:intergenic | 30.0% | |
| AAAATACCCTACAAATGCAT+AGG | + | chr5_3:65406095-65406114 | None:intergenic | 30.0% | |
| AGAATGATGTGTCTTTATTG+AGG | - | chr5_3:65406377-65406396 | Msa0825530:intron | 30.0% | |
| TAAATCACTTGCTTTATGCT+TGG | - | chr5_3:65406522-65406541 | Msa0825530:intron | 30.0% | |
| AAATCACTTGCTTTATGCTT+GGG | - | chr5_3:65406523-65406542 | Msa0825530:intron | 30.0% | |
| ! | GCTGGTACAAATTTTTGTAT+TGG | - | chr5_3:65406733-65406752 | Msa0825530:intron | 30.0% |
| AAGAGCAATAAGCAATGATA+AGG | + | chr5_3:65406833-65406852 | None:intergenic | 30.0% | |
| AAATCAAATCAAGAGAGAGA+TGG | + | chr5_3:65406924-65406943 | None:intergenic | 30.0% | |
| TAGTAATCCTATCAGTAGTA+GGG | + | chr5_3:65407055-65407074 | None:intergenic | 30.0% | |
| ATTATAATACGTAGGCCATA+GGG | + | chr5_3:65407183-65407202 | None:intergenic | 30.0% | |
| TATTATAATACGTAGGCCAT+AGG | + | chr5_3:65407184-65407203 | None:intergenic | 30.0% | |
| TATGGCCTACGTATTATAAT+AGG | - | chr5_3:65407183-65407202 | Msa0825530:CDS | 30.0% | |
| ATGGCCTACGTATTATAATA+GGG | - | chr5_3:65407184-65407203 | Msa0825530:CDS | 30.0% | |
| AGCAATGGAAAAAGTTACAA+AGG | + | chr5_3:65407293-65407312 | None:intergenic | 30.0% | |
| CCTTCAAAATTAGAGAAAAG+GGG | + | chr5_3:65407342-65407361 | None:intergenic | 30.0% | |
| !! | CTAATATTGTTTTGCAACGA+CGG | + | chr5_3:65407464-65407483 | None:intergenic | 30.0% |
| CAGATTCAGATGTAAAGATA+TGG | + | chr5_3:65407579-65407598 | None:intergenic | 30.0% | |
| CATATCTTTACATCTGAATC+TGG | - | chr5_3:65407577-65407596 | Msa0825530:intron | 30.0% | |
| ! | GACCTGATCATAATCATTTT+CGG | - | chr5_3:65407615-65407634 | Msa0825530:intron | 30.0% |
| ! | ACCTGATCATAATCATTTTC+GGG | - | chr5_3:65407616-65407635 | Msa0825530:intron | 30.0% |
| GGTTAACAGTGAAATGTAAA+AGG | + | chr5_3:65407976-65407995 | None:intergenic | 30.0% | |
| ATGCATAGAACAACATAAAC+TGG | + | chr5_3:65407997-65408016 | None:intergenic | 30.0% | |
| AACAGGTAAAAGATATGATC+TGG | - | chr5_3:65408029-65408048 | Msa0825530:intron | 30.0% | |
| GGATATGATAGAATTGTACA+AGG | - | chr5_3:65408098-65408117 | Msa0825530:intron | 30.0% | |
| GGATCTTCTATTGATACAAT+TGG | + | chr5_3:65408240-65408259 | None:intergenic | 30.0% | |
| AATAGAAGATCCATTTGACA+AGG | - | chr5_3:65408248-65408267 | Msa0825530:intron | 30.0% | |
| CTATTGCAGAGACAAAAAAA+TGG | + | chr5_3:65408484-65408503 | None:intergenic | 30.0% | |
| TTTGTCTCTGCAATAGTTAA+AGG | - | chr5_3:65408488-65408507 | Msa0825530:intron | 30.0% | |
| TTGTCTCTGCAATAGTTAAA+GGG | - | chr5_3:65408489-65408508 | Msa0825530:intron | 30.0% | |
| ! | GTTAAGCAGCTATAATTTGT+TGG | - | chr5_3:65408625-65408644 | Msa0825530:intron | 30.0% |
| ATATCTCATAACCTCCAAAA+CGG | + | chr5_3:65408696-65408715 | None:intergenic | 30.0% | |
| TGATGACACATTAACATGTT+AGG | - | chr5_3:65408762-65408781 | Msa0825530:intron | 30.0% | |
| TAACATGTTAGGTAAGAAAG+GGG | - | chr5_3:65408773-65408792 | Msa0825530:intron | 30.0% | |
| CTGCAGAATCATTCAAATTA+AGG | + | chr5_3:65408902-65408921 | None:intergenic | 30.0% | |
| ! | CTTAATTTGAATGATTCTGC+AGG | - | chr5_3:65408900-65408919 | Msa0825530:intron | 30.0% |
| TTGTAATGCTCTTCTTCTTA+AGG | - | chr5_3:65408987-65409006 | Msa0825530:intron | 30.0% | |
| CCTCAACTTAATTATGAAAC+AGG | + | chr5_3:65409160-65409179 | None:intergenic | 30.0% | |
| ! | CCTGTTTCATAATTAAGTTG+AGG | - | chr5_3:65409157-65409176 | Msa0825530:intron | 30.0% |
| !! | TCATAATTAAGTTGAGGCAT+TGG | - | chr5_3:65409163-65409182 | Msa0825530:intron | 30.0% |
| !! | CATAATTAAGTTGAGGCATT+GGG | - | chr5_3:65409164-65409183 | Msa0825530:intron | 30.0% |
| GAAAAAAAATGCAAACACAG+TGG | + | chr5_3:65409346-65409365 | None:intergenic | 30.0% | |
| TTTCCTCTCTATTTATCTAG+AGG | - | chr5_3:65409362-65409381 | Msa0825530:intron | 30.0% | |
| TTCCTCTCTATTTATCTAGA+GGG | - | chr5_3:65409363-65409382 | Msa0825530:intron | 30.0% | |
| !!! | GGTTTTAAGTGGTGATTTTA+GGG | - | chr5_3:65409828-65409847 | Msa0825530:intron | 30.0% |
| !! | GTTTTAAGTGGTGATTTTAG+GGG | - | chr5_3:65409829-65409848 | Msa0825530:intron | 30.0% |
| TCTTCAATAAACAAAAACCG+GGG | - | chr5_3:65409944-65409963 | Msa0825530:intron | 30.0% | |
| ATTGTGAACCTTACATAACT+TGG | - | chr5_3:65409972-65409991 | Msa0825530:intron | 30.0% | |
| TAGAAAACTCCTGTTATGAT+AGG | - | chr5_3:65410156-65410175 | Msa0825530:CDS | 30.0% | |
| !!! | TTTTTTCTTTCTCCAAGTGA+AGG | - | chr5_3:65410265-65410284 | Msa0825530:CDS | 30.0% |
| TCAAAAAACCCCAAAAAGAT+AGG | - | chr5_3:65410459-65410478 | Msa0825530:exon | 30.0% | |
| ! | AAGTTGAACCTATCTTTTTG+GGG | + | chr5_3:65410470-65410489 | None:intergenic | 30.0% |
| ! | GAAGTTGAACCTATCTTTTT+GGG | + | chr5_3:65410471-65410490 | None:intergenic | 30.0% |
| ! | TGAAGTTGAACCTATCTTTT+TGG | + | chr5_3:65410472-65410491 | None:intergenic | 30.0% |
| TGATGAAATGAATGAGGTCA+AGG | + | chr5_3:65400754-65400773 | None:intergenic | 35.0% | |
| ! | CATTTCTACGATCGATTCTT+CGG | + | chr5_3:65400815-65400834 | None:intergenic | 35.0% |
| ATATTACGATGAAGAGAACG+GGG | + | chr5_3:65400924-65400943 | None:intergenic | 35.0% | |
| GATATTACGATGAAGAGAAC+GGG | + | chr5_3:65400925-65400944 | None:intergenic | 35.0% | |
| TGATTACGAAAGTAAAAGCG+AGG | - | chr5_3:65401054-65401073 | Msa0825530:intron | 35.0% | |
| ! | AGGCAAATTCTTGATAGTAG+AGG | - | chr5_3:65401074-65401093 | Msa0825530:intron | 35.0% |
| ATTAACATCTTACATGCCAG+TGG | + | chr5_3:65401171-65401190 | None:intergenic | 35.0% | |
| CCTCACACATTCAATTACTA+CGG | + | chr5_3:65401255-65401274 | None:intergenic | 35.0% | |
| ! | TTTTTCCCCGCTAGTTATTA+TGG | + | chr5_3:65401553-65401572 | None:intergenic | 35.0% |
| !! | TGTGTATAAGTTTGGTTCTG+TGG | - | chr5_3:65401622-65401641 | Msa0825530:intron | 35.0% |
| TCAATGTTAGGTTTCACATC+TGG | + | chr5_3:65401887-65401906 | None:intergenic | 35.0% | |
| TACTAATAAAAGAGGGACTG+GGG | - | chr5_3:65402020-65402039 | Msa0825530:intron | 35.0% | |
| ACATCAGTCTTCTTAAATCG+TGG | - | chr5_3:65402165-65402184 | Msa0825530:intron | 35.0% | |
| CATTGCCTAAACTTTCTATG+CGG | - | chr5_3:65402360-65402379 | Msa0825530:CDS | 35.0% | |
| AAGTTCCGCATAGAAAGTTT+AGG | + | chr5_3:65402368-65402387 | None:intergenic | 35.0% | |
| CATTCTGATGCAATTTCACT+TGG | - | chr5_3:65402450-65402469 | Msa0825530:intron | 35.0% | |
| TAGATATAGCTAGCCAAACA+AGG | + | chr5_3:65402574-65402593 | None:intergenic | 35.0% | |
| ! | TGTTTGGCTAGCTATATCTA+AGG | - | chr5_3:65402574-65402593 | Msa0825530:intron | 35.0% |
| ! | TGGATTAACATTGACTGTTC+GGG | - | chr5_3:65402771-65402790 | Msa0825530:intron | 35.0% |
| ! | GATGATTCATTTCAGGTATG+AGG | - | chr5_3:65402796-65402815 | Msa0825530:intron | 35.0% |
| CTATCATAGCATGATCAATC+TGG | + | chr5_3:65402943-65402962 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTCTGTTTTGTCA+AGG | + | chr5_3:65402967-65402986 | None:intergenic | 35.0% |
| CCTTGACAAAACAGAGAAAA+AGG | - | chr5_3:65402964-65402983 | Msa0825530:intron | 35.0% | |
| GTATTTCAACATCTTTCTGC+TGG | - | chr5_3:65402986-65403005 | Msa0825530:intron | 35.0% | |
| TTTCATTTCCTTTCCTGCAA+CGG | + | chr5_3:65403253-65403272 | None:intergenic | 35.0% | |
| !! | ACACACTTTTGTTTCGTAGT+GGG | - | chr5_3:65403317-65403336 | Msa0825530:intron | 35.0% |
| AATAAAGTTGGGACAGTGTT+TGG | - | chr5_3:65403385-65403404 | Msa0825530:intron | 35.0% | |
| !! | GAAAGGTGTTGTGTTCAAAA+CGG | - | chr5_3:65403528-65403547 | Msa0825530:intron | 35.0% |
| GGATTTGAATTTCAGTAAGG+TGG | - | chr5_3:65403561-65403580 | Msa0825530:intron | 35.0% | |
| !! | TTCTGATTTTTGTTTGCAGG+GGG | - | chr5_3:65403845-65403864 | Msa0825530:intron | 35.0% |
| ATAACAGTAAAAGCAGGAAC+AGG | + | chr5_3:65404099-65404118 | None:intergenic | 35.0% | |
| !! | CCTGCTTTTACTGTTATAAG+CGG | - | chr5_3:65404102-65404121 | Msa0825530:intron | 35.0% |
| TGGAAATAATCTGGCAATTG+AGG | - | chr5_3:65404137-65404156 | Msa0825530:intron | 35.0% | |
| AGTTAAATGCCCATTGAATG+CGG | - | chr5_3:65404276-65404295 | Msa0825530:intron | 35.0% | |
| ACAAAGAACTGACAAGATGT+TGG | + | chr5_3:65404365-65404384 | None:intergenic | 35.0% | |
| ! | TAACTTTGGAAGTTGGATTG+TGG | - | chr5_3:65404389-65404408 | Msa0825530:intron | 35.0% |
| ! | GCCAGGTGTTATATTATGAT+AGG | + | chr5_3:65404464-65404483 | None:intergenic | 35.0% |
| GCTTCTATAGTGATTGTTGA+AGG | + | chr5_3:65404545-65404564 | None:intergenic | 35.0% | |
| AAAGTGGAAGTTGCATTGAA+CGG | + | chr5_3:65404586-65404605 | None:intergenic | 35.0% | |
| !!! | TTCGCTTTTTCTTGAGAAAG+TGG | + | chr5_3:65404602-65404621 | None:intergenic | 35.0% |
| TTCTCTTCTTACTGCAACAA+TGG | + | chr5_3:65404649-65404668 | None:intergenic | 35.0% | |
| CGATCATTAACCATTGAGTT+TGG | + | chr5_3:65404676-65404695 | None:intergenic | 35.0% | |
| CAACAATTTCATGCTAGACA+TGG | - | chr5_3:65404892-65404911 | Msa0825530:intron | 35.0% | |
| TGAATGCTCTATGAAAACAG+AGG | - | chr5_3:65404958-65404977 | Msa0825530:intron | 35.0% | |
| GGATAACAGTAAAAACAGCA+TGG | - | chr5_3:65405082-65405101 | Msa0825530:intron | 35.0% | |
| AACAGTAAAAACAGCATGGA+TGG | - | chr5_3:65405086-65405105 | Msa0825530:intron | 35.0% | |
| CAGCTTAAACAACATATCTC+AGG | + | chr5_3:65405519-65405538 | None:intergenic | 35.0% | |
| !! | GAGTCAACAATTAAGTTGGT+TGG | - | chr5_3:65405812-65405831 | Msa0825530:intron | 35.0% |
| !! | TCTTAATCTAACTTGCTCTG+AGG | - | chr5_3:65405951-65405970 | Msa0825530:intron | 35.0% |
| AGCAGTCCAATAGTTGTAAT+AGG | + | chr5_3:65406016-65406035 | None:intergenic | 35.0% | |
| ACTAATCCCTATGCATTTGT+AGG | - | chr5_3:65406085-65406104 | Msa0825530:intron | 35.0% | |
| CTAATCCCTATGCATTTGTA+GGG | - | chr5_3:65406086-65406105 | Msa0825530:intron | 35.0% | |
| !!! | TAGACTTTTTAGAATCTGCC+TGG | + | chr5_3:65406204-65406223 | None:intergenic | 35.0% |
| ! | ATCATAACCGGTTCTACTAA+TGG | + | chr5_3:65406686-65406705 | None:intergenic | 35.0% |
| !! | TTGGTTCTAGATTCTTGAGA+AGG | - | chr5_3:65406784-65406803 | Msa0825530:intron | 35.0% |
| TCAAAATCCTCCCTAATAGA+AGG | + | chr5_3:65406885-65406904 | None:intergenic | 35.0% | |
| AGTAATCCTATCAGTAGTAG+GGG | + | chr5_3:65407054-65407073 | None:intergenic | 35.0% | |
| CTAGTAATCCTATCAGTAGT+AGG | + | chr5_3:65407056-65407075 | None:intergenic | 35.0% | |
| TAATAGGGATAACCTCACTT+TGG | - | chr5_3:65407199-65407218 | Msa0825530:CDS | 35.0% | |
| AATAGGGATAACCTCACTTT+GGG | - | chr5_3:65407200-65407219 | Msa0825530:CDS | 35.0% | |
| ! | CCCCTTTTCTCTAATTTTGA+AGG | - | chr5_3:65407339-65407358 | Msa0825530:intron | 35.0% |
| TGAAGGTTAGGAAAATTCCT+TGG | - | chr5_3:65407356-65407375 | Msa0825530:intron | 35.0% | |
| AAACGACATATCACCATTAG+CGG | + | chr5_3:65407554-65407573 | None:intergenic | 35.0% | |
| ! | CCTGATCATAATCATTTTCG+GGG | - | chr5_3:65407617-65407636 | Msa0825530:intron | 35.0% |
| ! | CTGATCATAATCATTTTCGG+GGG | - | chr5_3:65407618-65407637 | Msa0825530:intron | 35.0% |
| !! | TGATCATAATCATTTTCGGG+GGG | - | chr5_3:65407619-65407638 | Msa0825530:intron | 35.0% |
| GACAGAATTAAGGCTTGAAA+AGG | - | chr5_3:65407694-65407713 | Msa0825530:intron | 35.0% | |
| AGAGGTTTATAAATGCCTTG+TGG | + | chr5_3:65407939-65407958 | None:intergenic | 35.0% | |
| CTTTAAATCTCCTCAAACGT+CGG | - | chr5_3:65408053-65408072 | Msa0825530:intron | 35.0% | |
| TTTAAATCTCCTCAAACGTC+GGG | - | chr5_3:65408054-65408073 | Msa0825530:intron | 35.0% | |
| !! | ACAGAATTTTAAGTCAGCAG+AGG | - | chr5_3:65408077-65408096 | Msa0825530:intron | 35.0% |
| TTGTACAAGGAACTATGTAC+CGG | - | chr5_3:65408111-65408130 | Msa0825530:intron | 35.0% | |
| GTGTAAATAGCCTGATTTAC+CGG | + | chr5_3:65408133-65408152 | None:intergenic | 35.0% | |
| TATTTACACCTTTGCAACTG+AGG | - | chr5_3:65408144-65408163 | Msa0825530:intron | 35.0% | |
| TATAACAACCTCAGTTGCAA+AGG | + | chr5_3:65408155-65408174 | None:intergenic | 35.0% | |
| ATCCATTTGACAAGGAAGAT+TGG | - | chr5_3:65408256-65408275 | Msa0825530:intron | 35.0% | |
| TCCATTTGACAAGGAAGATT+GGG | - | chr5_3:65408257-65408276 | Msa0825530:intron | 35.0% | |
| ATCAAGTATATCTCAAGCCT+TGG | - | chr5_3:65408285-65408304 | Msa0825530:intron | 35.0% | |
| ATAATACCTGGCAAATTCCA+AGG | + | chr5_3:65408305-65408324 | None:intergenic | 35.0% | |
| !! | TCCTTTTTAAGAGTCTTTCC+AGG | - | chr5_3:65408369-65408388 | Msa0825530:CDS | 35.0% |
| ACCTGGAAAGACTCTTAAAA+AGG | + | chr5_3:65408373-65408392 | None:intergenic | 35.0% | |
| ! | AGGTTTTTGTATGCTAACGA+CGG | - | chr5_3:65408389-65408408 | Msa0825530:CDS | 35.0% |
| ATGGCGAAATGAAATGTCAA+GGG | + | chr5_3:65408465-65408484 | None:intergenic | 35.0% | |
| AATGGCGAAATGAAATGTCA+AGG | + | chr5_3:65408466-65408485 | None:intergenic | 35.0% | |
| ! | TGTAGTAAGCATTACCGTTT+TGG | - | chr5_3:65408679-65408698 | Msa0825530:intron | 35.0% |
| ACAGGTTATTAGTGTAGCAA+TGG | - | chr5_3:65408737-65408756 | Msa0825530:intron | 35.0% | |
| GCATTAGTAAGGTTGCTTAT+TGG | - | chr5_3:65408844-65408863 | Msa0825530:intron | 35.0% | |
| ! | TCTCTCAGTTTGTTTAAGCT+TGG | - | chr5_3:65409074-65409093 | Msa0825530:intron | 35.0% |
| ! | GTATCTTCAAACTCTGGAAA+AGG | - | chr5_3:65409186-65409205 | Msa0825530:intron | 35.0% |
| ! | TTCATAGCTGATTTATCCGT+TGG | - | chr5_3:65409587-65409606 | Msa0825530:intron | 35.0% |
| GCGATTAGAAAAATACAACC+AGG | - | chr5_3:65409655-65409674 | Msa0825530:intron | 35.0% | |
| ATAAGAATGTGAAAGAGACC+TGG | + | chr5_3:65409676-65409695 | None:intergenic | 35.0% | |
| CTTTCACATTCTTATGCTGA+TGG | - | chr5_3:65409681-65409700 | Msa0825530:intron | 35.0% | |
| !!! | ACAACATTTTTTCATGGGTG+AGG | + | chr5_3:65409770-65409789 | None:intergenic | 35.0% |
| !!! | CAATGTATGTGGGTTTTAAG+TGG | - | chr5_3:65409817-65409836 | Msa0825530:intron | 35.0% |
| !!! | GGGTTTTAAGTGGTGATTTT+AGG | - | chr5_3:65409827-65409846 | Msa0825530:intron | 35.0% |
| CCAAGATATCCTAAAAGCAA+CGG | + | chr5_3:65409884-65409903 | None:intergenic | 35.0% | |
| AGAAATAGAGACAGTTCATC+GGG | + | chr5_3:65409907-65409926 | None:intergenic | 35.0% | |
| GAGAAATAGAGACAGTTCAT+CGG | + | chr5_3:65409908-65409927 | None:intergenic | 35.0% | |
| !! | TTCTGTTGTTTCACTTTACC+AGG | + | chr5_3:65410104-65410123 | None:intergenic | 35.0% |
| TTATGATAGGATCCGGAAAA+GGG | - | chr5_3:65410169-65410188 | Msa0825530:CDS | 35.0% | |
| TAAAGTCTGACAGCCTATAA+TGG | + | chr5_3:65410212-65410231 | None:intergenic | 35.0% | |
| TGTCATACTTTACCTTCACT+TGG | + | chr5_3:65410280-65410299 | None:intergenic | 35.0% | |
| ! | GGCAACACACTGTAAAATTT+TGG | + | chr5_3:65410536-65410555 | None:intergenic | 35.0% |
| AAAATCTAATGGCGCAATTG+AGG | + | chr5_3:65410557-65410576 | None:intergenic | 35.0% | |
| AACTGTTTGACTGAGTGTTT+AGG | - | chr5_3:65410580-65410599 | Msa0825530:five_prime_UTR | 35.0% | |
| ! | GAGTGGTGATGAAATGAATG+AGG | + | chr5_3:65400760-65400779 | None:intergenic | 40.0% |
| CCGTAGTAATTGAATGTGTG+AGG | - | chr5_3:65401252-65401271 | Msa0825530:intron | 40.0% | |
| ! | CTGAAATTCAATTCTGGAGG+TGG | + | chr5_3:65401859-65401878 | None:intergenic | 40.0% |
| CAGCTGAAATTCAATTCTGG+AGG | + | chr5_3:65401862-65401881 | None:intergenic | 40.0% | |
| GAGCAGCTGAAATTCAATTC+TGG | + | chr5_3:65401865-65401884 | None:intergenic | 40.0% | |
| GCTATAACACTGTAGCATAG+CGG | - | chr5_3:65402278-65402297 | Msa0825530:intron | 40.0% | |
| ATCATCAGTGTTATCGACCT+CGG | + | chr5_3:65402333-65402352 | None:intergenic | 40.0% | |
| !! | TACAAAGCTCAAGCCTTGTT+TGG | - | chr5_3:65402558-65402577 | Msa0825530:intron | 40.0% |
| TACACTCTATTAGAACTGCC+TGG | - | chr5_3:65402607-65402626 | Msa0825530:intron | 40.0% | |
| !! | TCGGGTTGATGATTCATTTC+AGG | - | chr5_3:65402789-65402808 | Msa0825530:intron | 40.0% |
| !! | AAAATATCTGAGGCGCTGAT+TGG | - | chr5_3:65402896-65402915 | Msa0825530:intron | 40.0% |
| AAGACAATTGGAAACCGAGT+AGG | - | chr5_3:65403084-65403103 | Msa0825530:intron | 40.0% | |
| AGACAATTGGAAACCGAGTA+GGG | - | chr5_3:65403085-65403104 | Msa0825530:intron | 40.0% | |
| !!! | AGCTGCTTTTTTTCCCTACT+CGG | + | chr5_3:65403101-65403120 | None:intergenic | 40.0% |
| TTTCTCTCTTGCTCTTGTTC+AGG | - | chr5_3:65403158-65403177 | Msa0825530:intron | 40.0% | |
| !! | CAACATTTTGTTTCCGTTGC+AGG | - | chr5_3:65403237-65403256 | Msa0825530:CDS | 40.0% |
| !! | TTTTGTTTCCGTTGCAGGAA+AGG | - | chr5_3:65403242-65403261 | Msa0825530:CDS | 40.0% |
| !! | GACACACTTTTGTTTCGTAG+TGG | - | chr5_3:65403316-65403335 | Msa0825530:intron | 40.0% |
| ! | GTCTTTCTTCCGTTTTCATC+CGG | - | chr5_3:65403678-65403697 | Msa0825530:intron | 40.0% |
| AGACTACTTTCATCAAGCTC+CGG | + | chr5_3:65403700-65403719 | None:intergenic | 40.0% | |
| CCGCTTATAACAGTAAAAGC+AGG | + | chr5_3:65404105-65404124 | None:intergenic | 40.0% | |
| ! | GCTTTTACTGTTATAAGCGG+TGG | - | chr5_3:65404105-65404124 | Msa0825530:intron | 40.0% |
| TTGGAAGTTGGATTGTGGAA+AGG | - | chr5_3:65404394-65404413 | Msa0825530:intron | 40.0% | |
| AGAGAAGAGTCCAAACTCAA+TGG | - | chr5_3:65404663-65404682 | Msa0825530:intron | 40.0% | |
| !! | CTTGGCCTTGAATTTGCATT+TGG | - | chr5_3:65404775-65404794 | Msa0825530:intron | 40.0% |
| ! | TCCATGTGCCAAGTTTTTGT+AGG | - | chr5_3:65405061-65405080 | Msa0825530:intron | 40.0% |
| TCCTACAAAAACTTGGCACA+TGG | + | chr5_3:65405065-65405084 | None:intergenic | 40.0% | |
| AAATCACTATGAAGCAGCAG+AGG | + | chr5_3:65405208-65405227 | None:intergenic | 40.0% | |
| TCAAATCTGCTTGCTCCAAT+TGG | + | chr5_3:65405289-65405308 | None:intergenic | 40.0% | |
| !! | ATTTGATGAAGCACTGCGAA+TGG | - | chr5_3:65405303-65405322 | Msa0825530:intron | 40.0% |
| !! | TTTGATGAAGCACTGCGAAT+GGG | - | chr5_3:65405304-65405323 | Msa0825530:intron | 40.0% |
| TCACCGACATTACAGTTATG+TGG | + | chr5_3:65405600-65405619 | None:intergenic | 40.0% | |
| AACTGTAATGTCGGTGAAGA+TGG | - | chr5_3:65405603-65405622 | Msa0825530:intron | 40.0% | |
| TGGACTGCTTCTTAATCTCT+AGG | - | chr5_3:65406027-65406046 | Msa0825530:intron | 40.0% | |
| AGCTCACGAACCTTCTATTA+GGG | - | chr5_3:65406872-65406891 | Msa0825530:intron | 40.0% | |
| AGAGATGGAGAGAAAGTTAG+AGG | + | chr5_3:65406909-65406928 | None:intergenic | 40.0% | |
| TTGTTGTGAAGTTGACCCTA+TGG | - | chr5_3:65407165-65407184 | Msa0825530:CDS | 40.0% | |
| ATAGGGATAACCTCACTTTG+GGG | - | chr5_3:65407201-65407220 | Msa0825530:CDS | 40.0% | |
| TCCTTGGAGAAACTGTGTTA+CGG | - | chr5_3:65407372-65407391 | Msa0825530:intron | 40.0% | |
| CCCCGAAAATGATTATGATC+AGG | + | chr5_3:65407620-65407639 | None:intergenic | 40.0% | |
| !! | GATCATAATCATTTTCGGGG+GGG | - | chr5_3:65407620-65407639 | Msa0825530:intron | 40.0% |
| !! | CAATCTTTAGAGCGTGTCAT+TGG | - | chr5_3:65407781-65407800 | Msa0825530:intron | 40.0% |
| !! | AAGGTGTCAAAAAGCACTAG+AGG | + | chr5_3:65407957-65407976 | None:intergenic | 40.0% |
| ! | TGCATGCTTTTCCCTAAAAC+AGG | - | chr5_3:65408012-65408031 | Msa0825530:intron | 40.0% |
| ! | GAACTATGTACCGGTAAATC+AGG | - | chr5_3:65408120-65408139 | Msa0825530:intron | 40.0% |
| TCCCAATCTTCCTTGTCAAA+TGG | + | chr5_3:65408261-65408280 | None:intergenic | 40.0% | |
| GTCGTTAGCATACAAAAACC+TGG | + | chr5_3:65408390-65408409 | None:intergenic | 40.0% | |
| !! | GCAGCTATAATTTGTTGGCT+AGG | - | chr5_3:65408630-65408649 | Msa0825530:intron | 40.0% |
| ! | AGTAAGCATTACCGTTTTGG+AGG | - | chr5_3:65408682-65408701 | Msa0825530:intron | 40.0% |
| !! | CATTGGGTTGAGCATTAGTA+AGG | - | chr5_3:65408833-65408852 | Msa0825530:intron | 40.0% |
| TGAATGATTCTGCAGGTAGT+AGG | - | chr5_3:65408907-65408926 | Msa0825530:intron | 40.0% | |
| GAATGATTCTGCAGGTAGTA+GGG | - | chr5_3:65408908-65408927 | Msa0825530:intron | 40.0% | |
| AATGATTCTGCAGGTAGTAG+GGG | - | chr5_3:65408909-65408928 | Msa0825530:intron | 40.0% | |
| ! | CTCAGTTTGTTTAAGCTTGG+AGG | - | chr5_3:65409077-65409096 | Msa0825530:intron | 40.0% |
| CATTGGGTATCTTCAAACTC+TGG | - | chr5_3:65409180-65409199 | Msa0825530:intron | 40.0% | |
| CAGTGGCAAAACTAAAGTAC+TGG | + | chr5_3:65409329-65409348 | None:intergenic | 40.0% | |
| TGCCCTCTAGATAAATAGAG+AGG | + | chr5_3:65409368-65409387 | None:intergenic | 40.0% | |
| ! | ATAGAAGGGAAGTACATGAG+AGG | + | chr5_3:65409407-65409426 | None:intergenic | 40.0% |
| ! | GTTATTTCCCATTGTGATCC+AGG | - | chr5_3:65409457-65409476 | Msa0825530:intron | 40.0% |
| TTTGACCACTTCAATGACCT+CGG | + | chr5_3:65409504-65409523 | None:intergenic | 40.0% | |
| CTTTAATCTGACCAACAGCA+AGG | + | chr5_3:65409613-65409632 | None:intergenic | 40.0% | |
| !!! | GTTTTCTGTCCGTTGCTTTT+AGG | - | chr5_3:65409872-65409891 | Msa0825530:intron | 40.0% |
| !!! | CCGTTGCTTTTAGGATATCT+TGG | - | chr5_3:65409881-65409900 | Msa0825530:intron | 40.0% |
| AACGAGTGCCAAGTTATGTA+AGG | + | chr5_3:65409983-65410002 | None:intergenic | 40.0% | |
| !! | ACTAGCTGCGAGTCTTATTT+AGG | - | chr5_3:65410027-65410046 | Msa0825530:intron | 40.0% |
| !! | CTAGCTGCGAGTCTTATTTA+GGG | - | chr5_3:65410028-65410047 | Msa0825530:intron | 40.0% |
| ACTCCTGTTATGATAGGATC+CGG | - | chr5_3:65410162-65410181 | Msa0825530:CDS | 40.0% | |
| TTTCCGGATCCTATCATAAC+AGG | + | chr5_3:65410168-65410187 | None:intergenic | 40.0% | |
| GTTATGATAGGATCCGGAAA+AGG | - | chr5_3:65410168-65410187 | Msa0825530:CDS | 40.0% | |
| ACTCCTCATGAGTCCATTAT+AGG | - | chr5_3:65410196-65410215 | Msa0825530:CDS | 40.0% | |
| GATACAGTTACTTCGGATTG+AGG | - | chr5_3:65410314-65410333 | Msa0825530:intron | 40.0% | |
| CAGTTTATGCTGGTGAAGAT+TGG | - | chr5_3:65410355-65410374 | Msa0825530:intron | 40.0% | |
| TTTATGCTGGTGAAGATTGG+AGG | - | chr5_3:65410358-65410377 | Msa0825530:intron | 40.0% | |
| ! | AGGTAGGACCATTCTGAGAA+AGG | - | chr5_3:65400652-65400671 | Msa0825530:three_prime_UTR | 45.0% |
| CGTGAAAGCCTTTCTCAGAA+TGG | + | chr5_3:65400663-65400682 | None:intergenic | 45.0% | |
| !! | ATTCGTCTTTTTCACGCGCT+CGG | + | chr5_3:65400789-65400808 | None:intergenic | 45.0% |
| TTTCGTGCTTCTGTTCCATC+TGG | - | chr5_3:65401140-65401159 | Msa0825530:intron | 45.0% | |
| !! | TCATGAAGGCACTGTCACTA+TGG | + | chr5_3:65402076-65402095 | None:intergenic | 45.0% |
| GCGGAACTTAACAGAAAACG+TGG | - | chr5_3:65402379-65402398 | Msa0825530:intron | 45.0% | |
| ACTCGGCACAGTTAGTTACA+AGG | - | chr5_3:65402531-65402550 | Msa0825530:intron | 45.0% | |
| GTTTACAGTCTCAATCAGCC+TGG | + | chr5_3:65402642-65402661 | None:intergenic | 45.0% | |
| TAAACTGCACTGCCCTGTTT+AGG | - | chr5_3:65402657-65402676 | Msa0825530:intron | 45.0% | |
| GGTATGAGGCTGTTGAGTTA+CGG | - | chr5_3:65402810-65402829 | Msa0825530:intron | 45.0% | |
| GTATGAGGCTGTTGAGTTAC+GGG | - | chr5_3:65402811-65402830 | Msa0825530:intron | 45.0% | |
| ! | GGGGACAAAGGTGTATATCT+AGG | - | chr5_3:65402836-65402855 | Msa0825530:intron | 45.0% |
| TCACCTAGTGAGGTAAAGCT+TGG | - | chr5_3:65403125-65403144 | Msa0825530:intron | 45.0% | |
| CAACCAAGCTTTACCTCACT+AGG | + | chr5_3:65403131-65403150 | None:intergenic | 45.0% | |
| CTCTTGCTCTTGTTCAGGAT+AGG | - | chr5_3:65403163-65403182 | Msa0825530:intron | 45.0% | |
| CATCAAGCTCCGGATGAAAA+CGG | + | chr5_3:65403690-65403709 | None:intergenic | 45.0% | |
| !! | TTTTGTTTGCAGGGGGAACT+TGG | - | chr5_3:65403852-65403871 | Msa0825530:intron | 45.0% |
| TTTGTTTGCAGGGGGAACTT+GGG | - | chr5_3:65403853-65403872 | Msa0825530:intron | 45.0% | |
| TCCATTGCTGCATGTAAAGC+TGG | - | chr5_3:65403897-65403916 | Msa0825530:intron | 45.0% | |
| CCATTGCTGCATGTAAAGCT+GGG | - | chr5_3:65403898-65403917 | Msa0825530:intron | 45.0% | |
| CATTGCTGCATGTAAAGCTG+GGG | - | chr5_3:65403899-65403918 | Msa0825530:intron | 45.0% | |
| !!! | CTGGGTTAGTTTTTCCAGAC+AGG | + | chr5_3:65404071-65404090 | None:intergenic | 45.0% |
| ATAAGCGGTGGAAAACATGC+TGG | - | chr5_3:65404117-65404136 | Msa0825530:intron | 45.0% | |
| CCAAAAAGGGAGATGGATGA+CGG | - | chr5_3:65404992-65405011 | Msa0825530:intron | 45.0% | |
| GTTGTTCATGACAAAAGGGC+AGG | - | chr5_3:65405551-65405570 | Msa0825530:intron | 45.0% | |
| GGGCCACATAACTGTAATGT+CGG | - | chr5_3:65405594-65405613 | Msa0825530:intron | 45.0% | |
| TGTAATGTCGGTGAAGATGG+TGG | - | chr5_3:65405606-65405625 | Msa0825530:intron | 45.0% | |
| AAAGCTTGCCTGGAGACATT+AGG | + | chr5_3:65405639-65405658 | None:intergenic | 45.0% | |
| !! | ACTTGCTCTGAGGCAACTAT+TGG | - | chr5_3:65405961-65405980 | Msa0825530:CDS | 45.0% |
| GAGATGTGCACAGTTAATCC+AGG | - | chr5_3:65406183-65406202 | Msa0825530:intron | 45.0% | |
| AGAAGCCCTGGATCTTGTAA+AGG | - | chr5_3:65406657-65406676 | Msa0825530:intron | 45.0% | |
| AAGGAGGCCATTAGTAGAAC+CGG | - | chr5_3:65406676-65406695 | Msa0825530:intron | 45.0% | |
| GAGCTCACGAACCTTCTATT+AGG | - | chr5_3:65406871-65406890 | Msa0825530:intron | 45.0% | |
| TCACGAACCTTCTATTAGGG+AGG | - | chr5_3:65406875-65406894 | Msa0825530:intron | 45.0% | |
| TTTCCCTCCCAAAAGGTAGA+GGG | - | chr5_3:65407022-65407041 | Msa0825530:intron | 45.0% | |
| !! | TAGAGAGTGCTCTAGTGAGA+GGG | - | chr5_3:65407258-65407277 | Msa0825530:intron | 45.0% |
| GTTACGGCAGTGTTATGAAC+TGG | - | chr5_3:65407388-65407407 | Msa0825530:CDS | 45.0% | |
| ATTCCGAAGTCTACCGCTAA+TGG | - | chr5_3:65407538-65407557 | Msa0825530:intron | 45.0% | |
| TCACCATTAGCGGTAGACTT+CGG | + | chr5_3:65407544-65407563 | None:intergenic | 45.0% | |
| GGTTGAAGCACAATGCGTAA+TGG | - | chr5_3:65407748-65407767 | Msa0825530:intron | 45.0% | |
| CTTGTGGTGAGATGTTTCAC+AGG | + | chr5_3:65407923-65407942 | None:intergenic | 45.0% | |
| CTGTGAAACATCTCACCACA+AGG | - | chr5_3:65407921-65407940 | Msa0825530:intron | 45.0% | |
| AAATTCTGTCCCGACGTTTG+AGG | + | chr5_3:65408066-65408085 | None:intergenic | 45.0% | |
| TGGTTGACCTGGATCACAAT+GGG | + | chr5_3:65409467-65409486 | None:intergenic | 45.0% | |
| TTGGTTGACCTGGATCACAA+TGG | + | chr5_3:65409468-65409487 | None:intergenic | 45.0% | |
| GGTCATTGAAGTGGTCAAAC+AGG | - | chr5_3:65409505-65409524 | Msa0825530:intron | 45.0% | |
| TGAAGTGGTCAAACAGGCAA+AGG | - | chr5_3:65409511-65409530 | Msa0825530:intron | 45.0% | |
| GCTGTTGGTCAGATTAAAGC+AGG | - | chr5_3:65409614-65409633 | Msa0825530:intron | 45.0% | |
| AAGGTTCACAATGCAATCCC+CGG | + | chr5_3:65409964-65409983 | None:intergenic | 45.0% | |
| ! | TGAGGAGTTCAACCCTTTTC+CGG | + | chr5_3:65410184-65410203 | None:intergenic | 45.0% |
| !! | CAGCCTATAATGGACTCATG+AGG | + | chr5_3:65410202-65410221 | None:intergenic | 45.0% |
| GGAGATCAAGCAGTTTATGC+TGG | - | chr5_3:65410345-65410364 | Msa0825530:intron | 45.0% | |
| !! | AATAAAATTGAATTATTATT+TGG | - | chr5_3:65404697-65404716 | Msa0825530:intron | 5.0% |
| !! | AAAATTAAAATTACAAAAAA+AGG | - | chr5_3:65406241-65406260 | Msa0825530:intron | 5.0% |
| !! | ATCAAAAATAAATAAATAAT+TGG | - | chr5_3:65406290-65406309 | Msa0825530:intron | 5.0% |
| !!! | AATTGATTTAAATAAATAAT+TGG | - | chr5_3:65406321-65406340 | Msa0825530:intron | 5.0% |
| ! | TGACGGCGTCTTCGAGTTTA+CGG | + | chr5_3:65400873-65400892 | None:intergenic | 50.0% |
| TACGATGAAGAGAACGGGGT+CGG | + | chr5_3:65400920-65400939 | None:intergenic | 50.0% | |
| GTTCCATCTGGAAACTCCAC+TGG | - | chr5_3:65401152-65401171 | Msa0825530:intron | 50.0% | |
| ATGCCAGTGGAGTTTCCAGA+TGG | + | chr5_3:65401158-65401177 | None:intergenic | 50.0% | |
| GCGGTCTTTGAACAAACCAC+TGG | - | chr5_3:65402297-65402316 | Msa0825530:intron | 50.0% | |
| !! | TCTGCTGAACTGTGCTGACT+CGG | - | chr5_3:65402514-65402533 | Msa0825530:intron | 50.0% |
| TTAGAACTGCCTGGCCAATG+TGG | - | chr5_3:65402616-65402635 | Msa0825530:intron | 50.0% | |
| AGGCTGTTGAGTTACGGGAT+GGG | - | chr5_3:65402816-65402835 | Msa0825530:intron | 50.0% | |
| !! | ATCTGAGGCGCTGATTGGTA+TGG | - | chr5_3:65402901-65402920 | Msa0825530:intron | 50.0% |
| ! | TCAATCTGGGACTGCAGTGT+TGG | + | chr5_3:65402929-65402948 | None:intergenic | 50.0% |
| TTGTTTGCAGGGGGAACTTG+GGG | - | chr5_3:65403854-65403873 | Msa0825530:intron | 50.0% | |
| CCCAGCTTTACATGCAGCAA+TGG | + | chr5_3:65403901-65403920 | None:intergenic | 50.0% | |
| TAAAGCTGGGGCTGCTGAAA+AGG | - | chr5_3:65403911-65403930 | Msa0825530:intron | 50.0% | |
| GGGCTGCTGAAAAGGAAGTA+TGG | - | chr5_3:65403919-65403938 | Msa0825530:intron | 50.0% | |
| TCAGCGATGTGCTTGTAGAG+TGG | + | chr5_3:65404048-65404067 | None:intergenic | 50.0% | |
| !! | AAGCAGGAACAGGAAGCACT+GGG | + | chr5_3:65404089-65404108 | None:intergenic | 50.0% |
| ! | AAAGCAGGAACAGGAAGCAC+TGG | + | chr5_3:65404090-65404109 | None:intergenic | 50.0% |
| ! | CTGCGTGACACTTTTAAGCC+AGG | + | chr5_3:65404481-65404500 | None:intergenic | 50.0% |
| ! | CCAAGAGTACGAAGAGAAGG+TGG | + | chr5_3:65404760-65404779 | None:intergenic | 50.0% |
| CCACCTTCTCTTCGTACTCT+TGG | - | chr5_3:65404757-65404776 | Msa0825530:intron | 50.0% | |
| ! | AGGCCAAGAGTACGAAGAGA+AGG | + | chr5_3:65404763-65404782 | None:intergenic | 50.0% |
| ATGCTAGACATGGGCACTTG+TGG | - | chr5_3:65404902-65404921 | Msa0825530:intron | 50.0% | |
| GGTTGCAGGAGTGAGTTCAT+CGG | - | chr5_3:65404923-65404942 | Msa0825530:intron | 50.0% | |
| ! | CAGGAGTGAGTTCATCGGTT+TGG | - | chr5_3:65404928-65404947 | Msa0825530:intron | 50.0% |
| ! | CCGTCATCCATCTCCCTTTT+TGG | + | chr5_3:65404995-65405014 | None:intergenic | 50.0% |
| GCTTTGCTCCTAATGTCTCC+AGG | - | chr5_3:65405628-65405647 | Msa0825530:CDS | 50.0% | |
| !! | ATCCAGGGCTTCTCTAAAGC+TGG | + | chr5_3:65406650-65406669 | None:intergenic | 50.0% |
| AGCCCTGGATCTTGTAAAGG+AGG | - | chr5_3:65406660-65406679 | Msa0825530:intron | 50.0% | |
| GGCCTCCTTTACAAGATCCA+GGG | + | chr5_3:65406665-65406684 | None:intergenic | 50.0% | |
| TGGCCTCCTTTACAAGATCC+AGG | + | chr5_3:65406666-65406685 | None:intergenic | 50.0% | |
| CTCTACCTTTCCCTCCCAAA+AGG | - | chr5_3:65407015-65407034 | Msa0825530:intron | 50.0% | |
| !! | CTCTACCTTTTGGGAGGGAA+AGG | + | chr5_3:65407023-65407042 | None:intergenic | 50.0% |
| CTTTCCCTCCCAAAAGGTAG+AGG | - | chr5_3:65407021-65407040 | Msa0825530:intron | 50.0% | |
| ! | GCAAGCACCCTCTACCTTTT+GGG | + | chr5_3:65407032-65407051 | None:intergenic | 50.0% |
| TGCTTGCCCCTACTACTGAT+AGG | - | chr5_3:65407045-65407064 | Msa0825530:intron | 50.0% | |
| ! | ATAACCTCACTTTGGGGAGC+TGG | - | chr5_3:65407207-65407226 | Msa0825530:CDS | 50.0% |
| !! | CTAGAGAGTGCTCTAGTGAG+AGG | - | chr5_3:65407257-65407276 | Msa0825530:intron | 50.0% |
| !! | AGAGAGTGCTCTAGTGAGAG+GGG | - | chr5_3:65407259-65407278 | Msa0825530:intron | 50.0% |
| GCCGTAACACAGTTTCTCCA+AGG | + | chr5_3:65407376-65407395 | None:intergenic | 50.0% | |
| CTCAAGCCTTGGAATTTGCC+AGG | - | chr5_3:65408296-65408315 | Msa0825530:intron | 50.0% | |
| ! | GAAGGGAAGTACATGAGAGG+AGG | + | chr5_3:65409404-65409423 | None:intergenic | 50.0% |
| GTGATCCAGGTCAACCAAGT+TGG | - | chr5_3:65409470-65409489 | Msa0825530:intron | 50.0% | |
| CAGTTCCAACTTGGTTGACC+TGG | + | chr5_3:65409478-65409497 | None:intergenic | 50.0% | |
| TGTGACCGAGGTCATTGAAG+TGG | - | chr5_3:65409496-65409515 | Msa0825530:intron | 50.0% | |
| ! | AACAGGCAAAGGAAGCGCAT+TGG | - | chr5_3:65409522-65409541 | Msa0825530:intron | 50.0% |
| ! | ACAGGCAAAGGAAGCGCATT+GGG | - | chr5_3:65409523-65409542 | Msa0825530:intron | 50.0% |
| GTGGTGACATCTCACAGAAG+TGG | - | chr5_3:65409548-65409567 | Msa0825530:intron | 50.0% | |
| !! | TTATCCGTTGGCCTTGCTGT+TGG | - | chr5_3:65409599-65409618 | Msa0825530:intron | 50.0% |
| TCTAATCGCTCTCCTCTGCA+AGG | + | chr5_3:65409644-65409663 | None:intergenic | 50.0% | |
| CTTCGGATTGAGGAAGAGCT+TGG | - | chr5_3:65410324-65410343 | Msa0825530:intron | 50.0% | |
| ! | GACGGCGTCTTCGAGTTTAC+GGG | + | chr5_3:65400872-65400891 | None:intergenic | 55.0% |
| !!! | GTCGGAGGTTTTGGCTCTGA+CGG | + | chr5_3:65400902-65400921 | None:intergenic | 55.0% |
| CTCAATCAGCCTGGCCACAT+TGG | + | chr5_3:65402633-65402652 | None:intergenic | 55.0% | |
| GAGGCTGTTGAGTTACGGGA+TGG | - | chr5_3:65402815-65402834 | Msa0825530:intron | 55.0% | |
| GGCTGTTGAGTTACGGGATG+GGG | - | chr5_3:65402817-65402836 | Msa0825530:intron | 55.0% | |
| GAGTTACGGGATGGGGACAA+AGG | - | chr5_3:65402824-65402843 | Msa0825530:intron | 55.0% | |
| GCAGCTTGACTCACCTAGTG+AGG | - | chr5_3:65403115-65403134 | Msa0825530:intron | 55.0% | |
| AAGCACATCGCTGACCTGTC+TGG | - | chr5_3:65404054-65404073 | Msa0825530:intron | 55.0% | |
| ACATGGGCACTTGTGGTTGC+AGG | - | chr5_3:65404909-65404928 | Msa0825530:intron | 55.0% | |
| !! | CACCAGCTTTAGAGAAGCCC+TGG | - | chr5_3:65406645-65406664 | Msa0825530:intron | 55.0% |
| AAGATCGCTCTTGACGTCGC+TGG | - | chr5_3:65406715-65406734 | Msa0825530:intron | 55.0% | |
| !! | GCACCCTCTACCTTTTGGGA+GGG | + | chr5_3:65407028-65407047 | None:intergenic | 55.0% |
| ! | AGCACCCTCTACCTTTTGGG+AGG | + | chr5_3:65407029-65407048 | None:intergenic | 55.0% |
| ! | GGCAAGCACCCTCTACCTTT+TGG | + | chr5_3:65407033-65407052 | None:intergenic | 55.0% |
| GAGAAAAGGGGTCTGTTCGC+CGG | + | chr5_3:65407330-65407349 | None:intergenic | 55.0% | |
| CCTCGGTCACAGTTCCAACT+TGG | + | chr5_3:65409487-65409506 | None:intergenic | 55.0% | |
| ! | CCAAGTTGGAACTGTGACCG+AGG | - | chr5_3:65409484-65409503 | Msa0825530:intron | 55.0% |
| ! | CAGGCAAAGGAAGCGCATTG+GGG | - | chr5_3:65409524-65409543 | Msa0825530:intron | 55.0% |
| ! | AGGCAAAGGAAGCGCATTGG+GGG | - | chr5_3:65409525-65409544 | Msa0825530:intron | 55.0% |
| CTGACCAACAGCAAGGCCAA+CGG | + | chr5_3:65409606-65409625 | None:intergenic | 55.0% | |
| !!! | GGAGGTTTTGGCTCTGACGG+CGG | + | chr5_3:65400899-65400918 | None:intergenic | 60.0% |
| ! | GAGAACGGGGTCGGAGGTTT+TGG | + | chr5_3:65400911-65400930 | None:intergenic | 60.0% |
| GATGAAGAGAACGGGGTCGG+AGG | + | chr5_3:65400917-65400936 | None:intergenic | 60.0% | |
| CCTCGGATCGCAGAAACCAG+TGG | + | chr5_3:65402316-65402335 | None:intergenic | 60.0% | |
| !! | CCACTGGTTTCTGCGATCCG+AGG | - | chr5_3:65402313-65402332 | Msa0825530:CDS | 60.0% |
| ACTGCCAGCTCCCCAAAGTG+AGG | + | chr5_3:65407214-65407233 | None:intergenic | 60.0% | |
| ! | GGCAAAGGAAGCGCATTGGG+GGG | - | chr5_3:65409526-65409545 | Msa0825530:intron | 60.0% |
| ! | AAAGGAAGCGCATTGGGGGG+TGG | - | chr5_3:65409529-65409548 | Msa0825530:intron | 60.0% |
| AAAGCAGGCGCTCCTTGCAG+AGG | - | chr5_3:65409629-65409648 | Msa0825530:intron | 60.0% | |
| CACGCGCTCGGAGATGAGAG+TGG | + | chr5_3:65400777-65400796 | None:intergenic | 65.0% | |
| ! | GGCTCTGACGGCGGCATTGA+CGG | + | chr5_3:65400890-65400909 | None:intergenic | 65.0% |
| ACTGCCTGGCCAATGTGGCC+AGG | - | chr5_3:65402621-65402640 | Msa0825530:intron | 65.0% | |
| TCAGCCTGGCCACATTGGCC+AGG | + | chr5_3:65402628-65402647 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 65400637 | 65410672 | 65400637 | ID=Msa0825530;Name=Msa0825530 |
| chr5_3 | mRNA | 65400637 | 65410672 | 65400637 | ID=Msa0825530-mRNA-1;Parent=Msa0825530;Name=Msa0825530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=195|0.91|0.92|1|1|1|13|286|485 |
| chr5_3 | exon | 65400637 | 65400988 | 65400637 | ID=Msa0825530-mRNA-1:exon:20539;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65401633 | 65401830 | 65401633 | ID=Msa0825530-mRNA-1:exon:20538;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65402301 | 65402387 | 65402301 | ID=Msa0825530-mRNA-1:exon:20537;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65402992 | 65403077 | 65402992 | ID=Msa0825530-mRNA-1:exon:20536;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65403177 | 65403275 | 65403177 | ID=Msa0825530-mRNA-1:exon:20535;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65404555 | 65404658 | 65404555 | ID=Msa0825530-mRNA-1:exon:20534;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65405624 | 65405736 | 65405624 | ID=Msa0825530-mRNA-1:exon:20533;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65405958 | 65406038 | 65405958 | ID=Msa0825530-mRNA-1:exon:20532;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65407151 | 65407267 | 65407151 | ID=Msa0825530-mRNA-1:exon:20531;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65407374 | 65407445 | 65407374 | ID=Msa0825530-mRNA-1:exon:20530;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65408324 | 65408498 | 65408324 | ID=Msa0825530-mRNA-1:exon:20529;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65410132 | 65410286 | 65410132 | ID=Msa0825530-mRNA-1:exon:20528;Parent=Msa0825530-mRNA-1 |
| chr5_3 | exon | 65410373 | 65410672 | 65410373 | ID=Msa0825530-mRNA-1:exon:20527;Parent=Msa0825530-mRNA-1 |
| chr5_3 | five_prime_UTR | 65410478 | 65410672 | 65410478 | ID=Msa0825530-mRNA-1:five_prime_utr;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65410373 | 65410477 | 65410373 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65410132 | 65410286 | 65410132 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65408324 | 65408498 | 65408324 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65407374 | 65407445 | 65407374 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65407151 | 65407267 | 65407151 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65405958 | 65406038 | 65405958 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65405624 | 65405736 | 65405624 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65404555 | 65404658 | 65404555 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65403177 | 65403275 | 65403177 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65402992 | 65403077 | 65402992 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65402301 | 65402387 | 65402301 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65401633 | 65401830 | 65401633 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | CDS | 65400923 | 65400988 | 65400923 | ID=Msa0825530-mRNA-1:cds;Parent=Msa0825530-mRNA-1 |
| chr5_3 | three_prime_UTR | 65400637 | 65400922 | 65400637 | ID=Msa0825530-mRNA-1:three_prime_utr;Parent=Msa0825530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
