AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0075220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075220 MtrunA17_Chr1g0183311 93.266 891 59 1 1 891 1 890 0.0 1652
Msa0075220 MtrunA17_Chr1g0211711 79.284 782 115 6 120 891 315 1059 0.0 1272
Msa0075220 MtrunA17_Chr5g0426961 67.754 797 188 7 100 884 97 836 0.0 1064
Msa0075220 MtrunA17_Chr1g0211691 68.407 747 177 8 44 771 239 945 0.0 997
Msa0075220 MtrunA17_Chr1g0211661 69.120 693 169 5 131 823 218 865 0.0 972
Msa0075220 MtrunA17_Chr5g0420361 68.986 661 182 8 208 864 138 779 0.0 912
Msa0075220 MtrunA17_Chr6g0472441 65.185 675 185 11 208 876 80 710 0.0 858
Msa0075220 MtrunA17_Chr7g0275771 43.831 851 396 20 107 889 97 933 0.0 664
Msa0075220 MtrunA17_Chr5g0448301 59.786 562 165 4 234 793 129 631 0.0 649
Msa0075220 MtrunA17_Chr4g0075261 47.122 747 334 15 145 880 168 864 0.0 640
Msa0075220 MtrunA17_Chr2g0289121 47.432 740 311 13 144 880 155 819 0.0 619
Msa0075220 MtrunA17_Chr1g0192011 36.786 753 402 17 145 881 267 961 5.17e-148 462
Msa0075220 MtrunA17_Chr2g0289031 51.508 431 162 3 452 880 8 393 1.12e-141 426
Msa0075220 MtrunA17_Chr1g0147021 45.506 534 254 11 141 670 866 1366 1.84e-132 435
Msa0075220 MtrunA17_Chr1g0147021 72.059 136 38 0 736 871 1551 1686 1.53e-58 219
Msa0075220 MtrunA17_Chr2g0281051 34.788 779 444 16 145 885 207 959 3.39e-131 417
Msa0075220 MtrunA17_Chr2g0289091 47.368 399 130 10 526 845 23 420 2.83e-100 319
Msa0075220 MtrunA17_Chr4g0048531 37.077 561 296 14 368 881 727 1277 5.30e-98 333
Msa0075220 MtrunA17_Chr4g0048531 33.014 209 122 5 140 339 255 454 1.47e-27 120
Msa0075220 MtrunA17_Chr8g0364421 49.805 257 97 4 255 511 5 229 9.00e-70 230
Msa0075220 MtrunA17_Chr1g0211701 77.236 123 28 0 769 891 4 126 2.76e-64 213
Msa0075220 MtrunA17_Chr8g0340381 70.414 169 31 3 547 715 36 185 1.72e-61 206
Msa0075220 MtrunA17_Chr7g0231061 61.585 164 63 0 513 676 12 175 2.19e-59 201
Msa0075220 MtrunA17_Chr8g0361381 51.337 187 87 1 448 634 26 208 4.86e-58 197
Msa0075220 MtrunA17_Chr8g0361391 77.528 89 19 1 735 823 50 137 1.36e-42 152
Msa0075220 MtrunA17_Chr2g0289041 40.566 212 116 4 167 377 2 204 1.41e-42 154
Msa0075220 MtrunA17_Chr8g0364411 50.350 143 65 2 114 256 8 144 3.82e-37 136
Msa0075220 MtrunA17_Chr1g0211671 77.419 62 14 0 822 883 15 76 1.73e-27 108
Msa0075220 MtrunA17_Chr3g0119761 62.338 77 29 0 620 696 55 131 2.89e-22 93.6
Msa0075220 MtrunA17_Chr2g0289101 37.415 147 82 5 277 419 8 148 7.80e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075220 AT3G07610.1 43.384 922 400 11 28 886 35 897 0.0 712
Msa0075220 AT3G07610.3 42.189 941 406 12 28 886 35 919 0.0 691
Msa0075220 AT1G11950.1 48.988 741 308 13 145 880 193 868 0.0 688
Msa0075220 AT1G11950.3 48.988 741 308 13 145 880 193 868 0.0 688
Msa0075220 AT1G62310.1 49.108 729 313 12 145 869 209 883 0.0 679
Msa0075220 AT4G00990.1 43.718 780 369 16 143 880 78 829 0.0 602
Msa0075220 AT1G11950.2 46.736 674 289 13 145 813 193 801 0.0 585
Msa0075220 AT4G00990.3 42.524 729 349 16 143 829 78 778 1.08e-178 536
Msa0075220 AT4G00990.2 42.857 721 342 16 143 821 78 770 8.50e-178 533
Msa0075220 AT3G07610.2 40.089 676 322 9 28 640 35 690 1.10e-152 468
Msa0075220 AT1G09060.2 32.322 758 420 17 145 881 206 891 2.36e-116 377
Msa0075220 AT1G09060.1 32.322 758 420 17 145 881 206 891 2.36e-116 377
Msa0075220 AT1G09060.4 32.322 758 420 17 145 881 220 905 5.89e-116 377
Msa0075220 AT1G09060.3 32.322 758 420 17 145 881 220 905 5.89e-116 377
Msa0075220 AT4G21430.1 28.897 526 313 10 141 658 223 695 4.04e-59 218
Msa0075220 AT4G21430.1 43.791 153 85 1 735 887 768 919 7.60e-35 144

Find 234 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGTCATTGTTGGTTTC+TGG 0.066287 1_2:-50350229 None:intergenic
TTTAAATATTCTTCCAATTT+AGG 0.124269 1_2:-50353517 None:intergenic
AGTACATTGCTGACAATTAT+AGG 0.182829 1_2:-50351388 None:intergenic
TGATAAAGAAAATAGTTTAT+TGG 0.211724 1_2:+50353438 Msa0075220:CDS
TTGCTCGTATGAAGCCTTTA+TGG 0.217000 1_2:-50353341 None:intergenic
TCATACTCGTCTTTAATTTC+AGG 0.227847 1_2:+50348468 Msa0075220:five_prime_UTR
TCACAGCTTTAAACATAATA+AGG 0.229078 1_2:-50348506 None:intergenic
GCTATGGTTTCTTGATTATC+AGG 0.232645 1_2:-50348699 None:intergenic
AATTTGCACCAATTCTTTAC+TGG 0.236831 1_2:+50352335 Msa0075220:CDS
GCTTGATCTGGTCGAGAAAT+TGG 0.262373 1_2:+50355736 Msa0075220:CDS
TGTTTGTAGTGTTTGAAAAT+TGG 0.263463 1_2:-50348579 None:intergenic
GAGAGAGGATGTACCTAAAT+TGG 0.270507 1_2:+50353504 Msa0075220:CDS
GTCCTTATTGGTCTGTAATA+AGG 0.273383 1_2:+50349152 Msa0075220:CDS
TCTGCAGACTTGTGATTTAC+TGG 0.286546 1_2:-50355139 None:intergenic
TTTCTGCCACGTTTCTTTGC+CGG 0.291268 1_2:-50348759 None:intergenic
AGTGTTCGATTTGTGGAAAA+TGG 0.293306 1_2:+50353367 Msa0075220:CDS
TGAAGTGAAGCTGGATTCTA+AGG 0.294563 1_2:+50353201 Msa0075220:CDS
ACAGCATCCTGGACATTTCT+TGG 0.294851 1_2:-50350060 None:intergenic
GATTGAAGATGTGTCCTTAT+TGG 0.294904 1_2:+50349140 Msa0075220:CDS
TCACAATCATCATCGGCTTT+TGG 0.295247 1_2:-50351076 None:intergenic
CTTCGTGGTGGGAAGCTTCT+AGG 0.295572 1_2:+50350878 Msa0075220:CDS
CTCGCCTGGACTGGCTTAAT+TGG 0.302310 1_2:+50352369 Msa0075220:CDS
AAAGTTTATAACGTTATTAT+CGG 0.305847 1_2:+50348425 Msa0075220:five_prime_UTR
TGTTGCTGTTCAATGCATTC+AGG 0.310113 1_2:-50348996 None:intergenic
GCTGGAACTGAAGAAGATTA+AGG 0.321087 1_2:+50348893 Msa0075220:CDS
TATGTTATACCTTCAGATTT+CGG 0.328391 1_2:-50354618 None:intergenic
TAATTCATCTTCTTCCATAA+AGG 0.328727 1_2:+50353327 Msa0075220:CDS
GCAAAATAGTGTTCGATTTG+TGG 0.335906 1_2:+50353360 Msa0075220:CDS
AAGAAAATAGTTTATTGGTT+GGG 0.336358 1_2:+50353443 Msa0075220:CDS
GTGCCAGACATAACAAAATA+TGG 0.337395 1_2:-50356094 None:intergenic
TTTGTCTCTCCTGAAAATAT+TGG 0.339057 1_2:+50355079 Msa0075220:CDS
TCTGGCTGTAAAACATCTTT+AGG 0.339519 1_2:-50352539 None:intergenic
ATTATCAAGCATGTCAATCT+TGG 0.359732 1_2:-50353308 None:intergenic
AGAAGCATTTCAGAGAGTTC+AGG 0.360974 1_2:+50353539 Msa0075220:CDS
AACGGAGAAGGAAGCCGAAA+AGG 0.363667 1_2:+50348788 Msa0075220:CDS
TTATCAACTTCTTTGAGCTC+TGG 0.364253 1_2:-50353421 None:intergenic
CTTTCCTCAAATAAATTAGA+AGG 0.368022 1_2:-50352422 None:intergenic
AAGAGGCTTAAGGAGGAGTA+TGG 0.382059 1_2:+50354423 Msa0075220:CDS
ATTCTTTAGACGGTGCTCTC+TGG 0.384591 1_2:+50353470 Msa0075220:CDS
AGAAAATAGTTTATTGGTTG+GGG 0.387608 1_2:+50353444 Msa0075220:CDS
TAAATTTGAGTCGCGTAGTT+AGG 0.387882 1_2:+50356025 Msa0075220:three_prime_UTR
TATGGATTTGCTCAGGAGCT+TGG 0.388333 1_2:+50352587 Msa0075220:CDS
GTGCTCTCTGGGATATCTTT+CGG 0.394357 1_2:+50353482 Msa0075220:CDS
AAACAATATATGACTTGTAA+TGG 0.397925 1_2:+50356137 Msa0075220:three_prime_UTR
GGGAGCTACATGGTGATAAT+CGG 0.399614 1_2:+50353275 Msa0075220:CDS
GCCTCCTTCTAATTTATTTG+AGG 0.400880 1_2:+50352418 Msa0075220:CDS
ATTTGCTCAGGAGCTTGGGC+GGG 0.402390 1_2:+50352592 Msa0075220:CDS
CAAGTCTGCAGAGGACAAAT+TGG 0.404949 1_2:+50355150 Msa0075220:CDS
TGTGAAAACTATTGATTGCT+TGG 0.405542 1_2:+50351501 Msa0075220:CDS
TGTATCTCAGAGATTGAATC+TGG 0.410142 1_2:+50355993 Msa0075220:three_prime_UTR
ATACCTTCAGATTTCGGACT+TGG 0.410789 1_2:-50354612 None:intergenic
TTCAATGGCACTGGAGCAAA+GGG 0.413215 1_2:+50351362 Msa0075220:CDS
GTAGTTAGGTGTGGTGATCT+TGG 0.415690 1_2:+50356039 Msa0075220:three_prime_UTR
CTCAACCTCATGGTCATTGT+TGG 0.418130 1_2:-50350236 None:intergenic
TTTGCTCAGGAGCTTGGGCG+GGG 0.418489 1_2:+50352593 Msa0075220:CDS
ATGGATTTGCTCAGGAGCTT+GGG 0.418850 1_2:+50352588 Msa0075220:CDS
AACTAATGTGGAGGAGGAGC+TGG 0.421014 1_2:+50348875 Msa0075220:CDS
AATGTACTTGAATGTACATC+AGG 0.426491 1_2:+50351403 Msa0075220:CDS
GTCCTTATTACAGACCAATA+AGG 0.427034 1_2:-50349154 None:intergenic
TCATCCAATCGTCTTAAATA+CGG 0.427692 1_2:-50350289 None:intergenic
TGGGTACACAAAGGCTCGCC+TGG 0.428484 1_2:+50352355 Msa0075220:CDS
TCAAATAAAACGTCTGATCA+TGG 0.431981 1_2:-50354386 None:intergenic
TATGAACTCGGCACAATGAC+GGG 0.437450 1_2:-50352450 None:intergenic
TTTGAAAATTGGAATGTAAA+CGG 0.438366 1_2:-50348568 None:intergenic
AACAACACAGTTGCTTTCAC+AGG 0.439858 1_2:+50348663 Msa0075220:CDS
CTTGTAATGGTGTTCTTACA+AGG 0.441246 1_2:+50356150 Msa0075220:three_prime_UTR
CTGGAACTGAAGAAGATTAA+GGG 0.442023 1_2:+50348894 Msa0075220:CDS
TTCTTTAGACGGTGCTCTCT+GGG 0.443773 1_2:+50353471 Msa0075220:CDS
GGACTGGCTTAATTGGCCTC+AGG 0.444813 1_2:+50352376 Msa0075220:CDS
TTGCAATTGCAAAGCATGCT+TGG 0.446682 1_2:+50350088 Msa0075220:CDS
TTGTGTACCCAGTAAAGAAT+TGG 0.446939 1_2:-50352343 None:intergenic
TCTTGACCATTCACGAATCT+CGG 0.449180 1_2:-50351014 None:intergenic
AATGTACATCAGGTTTAAGC+TGG 0.453673 1_2:+50351413 Msa0075220:CDS
GACAAAATCAAGTGCAACCT+TGG 0.456526 1_2:-50355062 None:intergenic
TGAGAAGGAGTGAGCGTGCT+AGG 0.457513 1_2:+50348820 Msa0075220:CDS
ATGTCAGATGCATTCAAAAC+AGG 0.458193 1_2:-50351238 None:intergenic
AGGAAGAAGAAGGTGGCAAT+TGG 0.459943 1_2:+50348927 Msa0075220:CDS
TGAAATGCACGGAATGCAAC+CGG 0.461269 1_2:+50349220 Msa0075220:CDS
AAGGTATGCAAAATTTCTTC+CGG 0.461444 1_2:-50349239 None:intergenic
GAAGTATGCTTCTCAGTTCA+AGG 0.462341 1_2:-50351108 None:intergenic
ACACAAAGGCTCGCCTGGAC+TGG 0.464280 1_2:+50352360 Msa0075220:CDS
CTTTGTTGCTGCGAGCTTCG+TGG 0.465758 1_2:+50350863 Msa0075220:CDS
ATTTGCACCAATTCTTTACT+GGG 0.468225 1_2:+50352336 Msa0075220:CDS
AAAGAAAATAGTTTATTGGT+TGG 0.470270 1_2:+50353442 Msa0075220:CDS
ATTCGTGAATGGTCAAGATC+TGG 0.470424 1_2:+50351019 Msa0075220:CDS
TGTTGATGCTGCCGCTCCTC+CGG 0.475825 1_2:+50348740 Msa0075220:CDS
TTATCAAGCATGTCAATCTT+GGG 0.478672 1_2:-50353307 None:intergenic
GCCGATGATGATTGTGATCA+TGG 0.480443 1_2:+50351082 Msa0075220:CDS
TCATATTGCTGAAGTGAAGC+TGG 0.481347 1_2:+50353192 Msa0075220:CDS
ATGTCCTCCTCTTTCAAGTC+AGG 0.481667 1_2:-50350035 None:intergenic
ACGATTGGATGAAGAACAAA+TGG 0.482210 1_2:+50350300 Msa0075220:CDS
ACGGAGAAGGAAGCCGAAAA+GGG 0.482416 1_2:+50348789 Msa0075220:CDS
AGCTTCATCAGGAGCAGCTA+TGG 0.485026 1_2:-50348715 None:intergenic
TGTGATTTACTGGAAGTTTG+CGG 0.485220 1_2:-50355129 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.486399 1_2:+50352580 Msa0075220:CDS
GGTTTCTTGATTATCAGGAA+TGG 0.486545 1_2:-50348694 None:intergenic
CCATTCACGAATCTCGGGTT+GGG 0.489370 1_2:-50351008 None:intergenic
AAGATAAACTCAAACTCGAT+TGG 0.491141 1_2:-50350911 None:intergenic
GATTTGCTCAGGAGCTTGGG+CGG 0.493090 1_2:+50352591 Msa0075220:CDS
TATGTATGCTATGCTTGATC+TGG 0.494282 1_2:+50355724 Msa0075220:CDS
TGATGAAATCAATGCTGCTC+AGG 0.495231 1_2:+50348962 Msa0075220:CDS
TCTTCCGTATTTAAGACGAT+TGG 0.495391 1_2:+50350285 Msa0075220:CDS
CTTGACCATTCACGAATCTC+GGG 0.495468 1_2:-50351013 None:intergenic
GTAAAAGAAATGACAAGGGC+AGG 0.498499 1_2:+50349193 Msa0075220:CDS
AAACCCATCAGTATCTAGCT+AGG 0.502685 1_2:+50348531 Msa0075220:five_prime_UTR
CAGCTTCTGAACAAAAGTCC+AGG 0.502730 1_2:-50354554 None:intergenic
CCTTCAGATTTCGGACTTGG+TGG 0.506047 1_2:-50354609 None:intergenic
TGAAGAACAAATGGCTGAGA+AGG 0.507808 1_2:+50350309 Msa0075220:CDS
GCATCAACAGAAGCTTCATC+AGG 0.508288 1_2:-50348726 None:intergenic
TCAGAGATTGAATCTGGATA+GGG 0.513367 1_2:+50355999 Msa0075220:three_prime_UTR
GCATACCTTGTATTAACAGT+TGG 0.514852 1_2:+50349253 Msa0075220:CDS
GGAGCTACATGGTGATAATC+GGG 0.514858 1_2:+50353276 Msa0075220:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 1_2:+50351361 Msa0075220:CDS
ACCATTCACGAATCTCGGGT+TGG 0.516372 1_2:-50351009 None:intergenic
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 1_2:-50353258 None:intergenic
GACATTGCCAAGAAATGTCC+AGG 0.520062 1_2:+50350053 Msa0075220:CDS
ACTTGGTGGGGACAACCAGC+TGG 0.521593 1_2:-50354595 None:intergenic
AGATTAAGGGGAAACGTGGT+AGG 0.523807 1_2:+50348907 Msa0075220:CDS
TACAGTTTACATAGGAACCT+TGG 0.524108 1_2:-50355968 None:intergenic
AAACTATTGATTGCTTGGAT+TGG 0.524576 1_2:+50351506 Msa0075220:CDS
CTGTGGAGACTTCTGATAGT+AGG 0.527371 1_2:+50351200 Msa0075220:CDS
AGAACTTCTTATACTGTCCC+AGG 0.529232 1_2:+50351305 Msa0075220:CDS
GAATATACAGATCCTTTCAA+TGG 0.530031 1_2:+50352491 Msa0075220:CDS
GGACTCACCTGCACTTATCA+AGG 0.530918 1_2:+50350109 Msa0075220:CDS
CGATTTGTGGAAAATGGAAG+TGG 0.534768 1_2:+50353373 Msa0075220:CDS
ATAAAACGTCTGATCATGGA+TGG 0.535414 1_2:-50354382 None:intergenic
CCATTGCTCTCCTTTAAAGC+AGG 0.538406 1_2:+50353567 Msa0075220:CDS
TTCAGATTTCGGACTTGGTG+GGG 0.539205 1_2:-50354607 None:intergenic
CTCAGAGATTGAATCTGGAT+AGG 0.540049 1_2:+50355998 Msa0075220:three_prime_UTR
GGATCTGTATATTCTTTGAA+CGG 0.541600 1_2:-50352482 None:intergenic
ATGACGTAGATTTACTGCCC+TGG 0.541910 1_2:-50351323 None:intergenic
TTGCAATTACCACAGCATCC+TGG 0.543302 1_2:-50350071 None:intergenic
CTGCCACGTTTCTTTGCCGG+AGG 0.549368 1_2:-50348756 None:intergenic
CGAGGGCGTGATTATCTGCA+TGG 0.550325 1_2:+50350935 Msa0075220:CDS
GACTTGTAGGAATTGAACCC+TGG 0.555009 1_2:+50354536 Msa0075220:intron
GCTTGGTATTACGTATCTGA+CGG 0.555671 1_2:-50351462 None:intergenic
GAACTGACCTTGATAAGTGC+AGG 0.556203 1_2:-50350116 None:intergenic
ACAACACAGTTGCTTTCACA+GGG 0.556589 1_2:+50348664 Msa0075220:CDS
CTTCAGATTTCGGACTTGGT+GGG 0.557725 1_2:-50354608 None:intergenic
TAAAACGTCTGATCATGGAT+GGG 0.558437 1_2:-50354381 None:intergenic
TGACGTAGATTTACTGCCCT+GGG 0.558873 1_2:-50351322 None:intergenic
AATGCACGCCACATGACAAA+CGG 0.559884 1_2:-50351439 None:intergenic
GAAATCAATGCTGCTCAGGA+GGG 0.560506 1_2:+50348966 Msa0075220:CDS
GCTGGGAACCGTTTGTCATG+TGG 0.563485 1_2:+50351431 Msa0075220:CDS
CTGGGATATCTTTCGGAGAG+AGG 0.564748 1_2:+50353489 Msa0075220:CDS
TTACTTAACTAATGTGGAGG+AGG 0.564991 1_2:+50348869 Msa0075220:CDS
AAATCAATGCTGCTCAGGAG+GGG 0.565311 1_2:+50348967 Msa0075220:CDS
CACGAAGCTCGCAGCAACAA+AGG 0.565525 1_2:-50350862 None:intergenic
AAACCCTAGCTAGATACTGA+TGG 0.565719 1_2:-50348535 None:intergenic
AATTAAGCTTCAAGTTGCTG+TGG 0.566902 1_2:+50351183 Msa0075220:CDS
TGAAATCAATGCTGCTCAGG+AGG 0.567663 1_2:+50348965 Msa0075220:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 1_2:+50353255 Msa0075220:CDS
ACAGTATAAGAAGTTCTCAC+TGG 0.571064 1_2:-50351299 None:intergenic
AAGTGGAATATGTGATGAAA+AGG 0.573587 1_2:+50353390 Msa0075220:CDS
GAGGCCAATTAAGCCAGTCC+AGG 0.578924 1_2:-50352373 None:intergenic
TCTTTGTATTGCAACTGTAG+AGG 0.579879 1_2:+50356064 Msa0075220:three_prime_UTR
AATCAATGCTGCTCAGGAGG+GGG 0.580226 1_2:+50348968 Msa0075220:CDS
TGAGGATTACTTAACTAATG+TGG 0.581603 1_2:+50348863 Msa0075220:CDS
GAATAGTAGATCGTTGAATG+AGG 0.582028 1_2:+50348845 Msa0075220:CDS
TGTATATTCTTTGAACGGCA+AGG 0.583089 1_2:-50352477 None:intergenic
CCTGCTTTAAAGGAGAGCAA+TGG 0.584616 1_2:-50353567 None:intergenic
GAGTTTGAGTTTATCTTCCG+AGG 0.584896 1_2:+50350917 Msa0075220:CDS
TGGAACTGAAGAAGATTAAG+GGG 0.585226 1_2:+50348895 Msa0075220:CDS
GAAAATAGTTTATTGGTTGG+GGG 0.586081 1_2:+50353445 Msa0075220:CDS
GTTGCTGCGAGCTTCGTGGT+GGG 0.586137 1_2:+50350867 Msa0075220:CDS
GAAACGTGGTAGGAAGAAGA+AGG 0.586757 1_2:+50348917 Msa0075220:CDS
ATATGAACTCGGCACAATGA+CGG 0.586817 1_2:-50352451 None:intergenic
AAGGTATCCTGACTTGAAAG+AGG 0.587569 1_2:+50350028 Msa0075220:intron
AGGTTTAGAACACCATTGAA+AGG 0.588651 1_2:-50352503 None:intergenic
AACCCTAGCTAGATACTGAT+GGG 0.588680 1_2:-50348534 None:intergenic
AACCCATCAGTATCTAGCTA+GGG 0.590250 1_2:+50348532 Msa0075220:five_prime_UTR
CAAGACAAGAGGGAGCTACA+TGG 0.591607 1_2:+50353265 Msa0075220:CDS
GTCTGCAGAGGACAAATTGG+AGG 0.593405 1_2:+50355153 Msa0075220:CDS
TGTTGCTGCGAGCTTCGTGG+TGG 0.594415 1_2:+50350866 Msa0075220:CDS
TGATTGCTTGGATTGGTGTG+AGG 0.595645 1_2:+50351513 Msa0075220:CDS
ACTTGGAGAGCTCAACCTCA+TGG 0.596456 1_2:-50350246 None:intergenic
AAAACGTCTGATCATGGATG+GGG 0.596952 1_2:-50354380 None:intergenic
CCCAACCCGAGATTCGTGAA+TGG 0.597529 1_2:+50351008 Msa0075220:CDS
ACGTTTCTTTGCCGGAGGAG+CGG 0.599042 1_2:-50348751 None:intergenic
CTTTAGGCAACTTCACAGCA+AGG 0.600321 1_2:-50352523 None:intergenic
AAGAAGGTGGCAATTGGTGT+CGG 0.600696 1_2:+50348933 Msa0075220:CDS
ATGTACATCAGGTTTAAGCT+GGG 0.604955 1_2:+50351414 Msa0075220:CDS
ACCATGATCACAATCATCAT+CGG 0.605104 1_2:-50351083 None:intergenic
CGAGTGCTTTCGTTTGACAG+AGG 0.605461 1_2:+50355102 Msa0075220:CDS
GTTATGTCTGGCACACCTTG+AGG 0.606055 1_2:+50356103 Msa0075220:three_prime_UTR
GGCAGTAAATCTACGTCATG+AGG 0.606103 1_2:+50351327 Msa0075220:CDS
TAAAAGAAATGACAAGGGCA+GGG 0.606870 1_2:+50349194 Msa0075220:CDS
TCCTCAAATAAATTAGAAGG+AGG 0.607054 1_2:-50352419 None:intergenic
TGGAATATGTGATGAAAAGG+TGG 0.607337 1_2:+50353393 Msa0075220:CDS
AGTTTGAGTTTATCTTCCGA+GGG 0.609136 1_2:+50350918 Msa0075220:CDS
GATACATCTACAGTTTACAT+AGG 0.609345 1_2:-50355976 None:intergenic
TCTTTCAGTTTCAAAACCTG+AGG 0.609559 1_2:-50352392 None:intergenic
TGATCTGGTCGAGAAATTGG+AGG 0.612036 1_2:+50355739 Msa0075220:CDS
ACATACCAACTGTTAATACA+AGG 0.617370 1_2:-50349258 None:intergenic
AGCTTCTGAACAAAAGTCCA+GGG 0.617796 1_2:-50354553 None:intergenic
AGCACCTTGAGCAAGACAAG+AGG 0.618569 1_2:+50353254 Msa0075220:CDS
GAGATAGAAGCAAAGAGACA+AGG 0.619116 1_2:+50350331 Msa0075220:CDS
TCGGGTTGGGCAGCAGCACG+AGG 0.619296 1_2:-50350995 None:intergenic
ATGCATTGAACAGCAACAGA+TGG 0.621495 1_2:+50349001 Msa0075220:CDS
CGGCAAGGAAGATATGAACT+CGG 0.631163 1_2:-50352462 None:intergenic
TCGAGAAATTGGAGGAAGCA+AGG 0.632086 1_2:+50355747 Msa0075220:CDS
TTGAGTCGCGTAGTTAGGTG+TGG 0.636929 1_2:+50356030 Msa0075220:three_prime_UTR
CATACACAATAGCACAAGGA+AGG 0.637072 1_2:+50351258 Msa0075220:CDS
GCTCCTCCGGCAAAGAAACG+TGG 0.637351 1_2:+50348753 Msa0075220:CDS
CATGCAGATAATCACGCCCT+CGG 0.639805 1_2:-50350934 None:intergenic
TTACAGGTCTGGAGAAACCA+AGG 0.639931 1_2:+50355951 Msa0075220:intron
CCACCAAGTCCGAAATCTGA+AGG 0.644909 1_2:+50354609 Msa0075220:CDS
GAAGTGAAGCTGGATTCTAA+GGG 0.652860 1_2:+50353202 Msa0075220:CDS
AAAAGGGCGAAAGTGTGAGA+AGG 0.653518 1_2:+50348805 Msa0075220:CDS
CTGACATACACAATAGCACA+AGG 0.658068 1_2:+50351254 Msa0075220:CDS
GGGCAGGGTTGTGAAATGCA+CGG 0.660572 1_2:+50349209 Msa0075220:CDS
AAACCCGAAAATTAGTACAC+AGG 0.661989 1_2:-50356189 None:intergenic
GGATGGCTTGCAGACAGTGA+TGG 0.662046 1_2:+50351040 Msa0075220:CDS
ATTCTTTACTGGGTACACAA+AGG 0.662591 1_2:+50352346 Msa0075220:CDS
ATGAACTCGGCACAATGACG+GGG 0.667242 1_2:-50352449 None:intergenic
GTATCCTGACTTGAAAGAGG+AGG 0.668706 1_2:+50350031 Msa0075220:CDS
TCAATGTAAAAGAAATGACA+AGG 0.668906 1_2:+50349188 Msa0075220:CDS
TAGTACACAGGATATACAAG+TGG 0.669313 1_2:-50356177 None:intergenic
CGTGGTGGGAAGCTTCTAGG+TGG 0.669451 1_2:+50350881 Msa0075220:CDS
CTACATGGTGATAATCGGGA+CGG 0.669945 1_2:+50353280 Msa0075220:CDS
GTGAATGGTCAAGATCTGGA+TGG 0.677090 1_2:+50351023 Msa0075220:CDS
AGTAAATCACAAGTCTGCAG+AGG 0.679551 1_2:+50355141 Msa0075220:CDS
GGATTACTTAACTAATGTGG+AGG 0.684192 1_2:+50348866 Msa0075220:CDS
AAGAAATGTCCAGGATGCTG+TGG 0.691596 1_2:+50350062 Msa0075220:CDS
GAACTTCTTATACTGTCCCA+GGG 0.693482 1_2:+50351306 Msa0075220:CDS
GGGCGTGATTATCTGCATGG+TGG 0.701277 1_2:+50350938 Msa0075220:CDS
CTGCATCTGACATATCACAA+TGG 0.702155 1_2:-50352634 None:intergenic
ACGTGGTAGGAAGAAGAAGG+TGG 0.709702 1_2:+50348920 Msa0075220:CDS
AAGAAGATTAAGGGGAAACG+TGG 0.711553 1_2:+50348903 Msa0075220:CDS
CAATGTAAAAGAAATGACAA+GGG 0.715489 1_2:+50349189 Msa0075220:CDS
GAAAATTGGAATGTAAACGG+CGG 0.717466 1_2:-50348565 None:intergenic
AGAAACCAACAATGACCATG+AGG 0.730663 1_2:+50350231 Msa0075220:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 1_2:+50351363 Msa0075220:CDS
CAACACAGTTGCTTTCACAG+GGG 0.779411 1_2:+50348665 Msa0075220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATATTTATTAT+CGG + chr1_2:50349952-50349971 Msa0075220:intron 0.0%
!!! TTTTTTTTTTTTTTTGTCTT+TGG + chr1_2:50350614-50350633 Msa0075220:intron 10.0%
!!! TTTTTTTTTTTTTTGTCTTT+GGG + chr1_2:50350615-50350634 Msa0075220:intron 10.0%
!!! ACTATAATTTTACTTTATTT+AGG + chr1_2:50351625-50351644 Msa0075220:intron 10.0%
!!! CTATAATTTTACTTTATTTA+GGG + chr1_2:50351626-50351645 Msa0075220:intron 10.0%
!! AAAGTTTATAACGTTATTAT+CGG + chr1_2:50348425-50348444 Msa0075220:five_prime_UTR 15.0%
!!! AAAAATATTTATTATCGGTT+TGG + chr1_2:50349957-50349976 Msa0075220:intron 15.0%
!! TGATAAAGAAAATAGTTTAT+TGG + chr1_2:50353438-50353457 Msa0075220:CDS 15.0%
!! TTTAAATATTCTTCCAATTT+AGG - chr1_2:50353520-50353539 None:intergenic 15.0%
!!! ACTTTTCAAAAGAAAAAATT+GGG - chr1_2:50353867-50353886 None:intergenic 15.0%
!!! TACTTTTCAAAAGAAAAAAT+TGG - chr1_2:50353868-50353887 None:intergenic 15.0%
!!! TTCTTTTGAAAAGTAATTTT+TGG + chr1_2:50353873-50353892 Msa0075220:intron 15.0%
!!! ATTTAAAATAGATGATCAAA+AGG + chr1_2:50354829-50354848 Msa0075220:intron 15.0%
!! TTTGAAAATTGGAATGTAAA+CGG - chr1_2:50348571-50348590 None:intergenic 20.0%
!! TGTAGATTTATGTTTGAATT+TGG + chr1_2:50349064-50349083 Msa0075220:intron 20.0%
!! ACAGAATAAAACATAAGTTA+AGG - chr1_2:50349297-50349316 None:intergenic 20.0%
!! TACATTGTTTATAAAAGTGA+AGG - chr1_2:50349804-50349823 None:intergenic 20.0%
!!! GTGAAAAACATGATATTTTA+GGG + chr1_2:50349895-50349914 Msa0075220:intron 20.0%
!!! CTAAATTTGTTGATAATGTT+GGG - chr1_2:50351967-50351986 None:intergenic 20.0%
!!! TCTAAATTTGTTGATAATGT+TGG - chr1_2:50351968-50351987 None:intergenic 20.0%
!! AAAGAAAATGAATACAACTA+GGG - chr1_2:50352173-50352192 None:intergenic 20.0%
!! ATAAAAATTGCAGAAATTAC+TGG - chr1_2:50352285-50352304 None:intergenic 20.0%
!!! CATAAGCAATATATGTTTTT+GGG - chr1_2:50352571-50352590 None:intergenic 20.0%
!! TAAAATATCATAAGACATTG+TGG - chr1_2:50352697-50352716 None:intergenic 20.0%
!! TAATTGAGTATCATATTGAA+AGG + chr1_2:50352740-50352759 Msa0075220:intron 20.0%
!!! TCATTTTATAAGGTATCTTT+TGG + chr1_2:50352995-50353014 Msa0075220:intron 20.0%
!! AAAGAAAATAGTTTATTGGT+TGG + chr1_2:50353442-50353461 Msa0075220:CDS 20.0%
!!! AAGAAAATAGTTTATTGGTT+GGG + chr1_2:50353443-50353462 Msa0075220:CDS 20.0%
!!! ACAATTTTCTATTATCTGTT+GGG + chr1_2:50353604-50353623 Msa0075220:intron 20.0%
!! TTAATGACTCAAGTTAAAAT+GGG - chr1_2:50353634-50353653 None:intergenic 20.0%
!! ATTAAGATTATCAACTCAAT+GGG - chr1_2:50354219-50354238 None:intergenic 20.0%
!! TATTAAGATTATCAACTCAA+TGG - chr1_2:50354220-50354239 None:intergenic 20.0%
!! GAAATTAAATACAAATAGAG+TGG - chr1_2:50354324-50354343 None:intergenic 20.0%
!! GGTATAACATACATATATTA+TGG + chr1_2:50354630-50354649 Msa0075220:intron 20.0%
!! CAAAAAAAAACTTTCTTGAA+TGG + chr1_2:50354879-50354898 Msa0075220:intron 20.0%
!!! TACATAACTTTAGTTTCTTT+AGG + chr1_2:50355880-50355899 Msa0075220:intron 20.0%
!!! AAACAATATATGACTTGTAA+TGG + chr1_2:50356137-50356156 Msa0075220:three_prime_UTR 20.0%
!!! TCACAGCTTTAAACATAATA+AGG - chr1_2:50348509-50348528 None:intergenic 25.0%
! TGTTTGTAGTGTTTGAAAAT+TGG - chr1_2:50348582-50348601 None:intergenic 25.0%
! TTACATGTTGTATGTAATTG+TGG + chr1_2:50349089-50349108 Msa0075220:intron 25.0%
!! TTACTGTTTCTCAATAAACA+GGG + chr1_2:50349117-50349136 Msa0075220:intron 25.0%
!!! TGTCATTTCTTTTACATTGA+TGG - chr1_2:50349188-50349207 None:intergenic 25.0%
! TCAATGTAAAAGAAATGACA+AGG + chr1_2:50349188-50349207 Msa0075220:CDS 25.0%
! CAATGTAAAAGAAATGACAA+GGG + chr1_2:50349189-50349208 Msa0075220:CDS 25.0%
! TGTTTATAAAAGTGAAGGTT+GGG - chr1_2:50349799-50349818 None:intergenic 25.0%
! TTGTTTATAAAAGTGAAGGT+TGG - chr1_2:50349800-50349819 None:intergenic 25.0%
!! GGTGAAAAACATGATATTTT+AGG + chr1_2:50349894-50349913 Msa0075220:intron 25.0%
!!! CATGATATTTTAGGGATATT+TGG + chr1_2:50349903-50349922 Msa0075220:intron 25.0%
!!! TTTATTATCGGTTTGGATTT+TGG + chr1_2:50349964-50349983 Msa0075220:intron 25.0%
! AGGAATAGTTAATCTATAAG+GGG - chr1_2:50350144-50350163 None:intergenic 25.0%
! CAGGAATAGTTAATCTATAA+GGG - chr1_2:50350145-50350164 None:intergenic 25.0%
! ACAGGAATAGTTAATCTATA+AGG - chr1_2:50350146-50350165 None:intergenic 25.0%
!! ACATTTGAAATGTGATAATC+TGG + chr1_2:50350181-50350200 Msa0075220:intron 25.0%
!! AAGTATTTTCAGCATATACT+TGG - chr1_2:50350266-50350285 None:intergenic 25.0%
! AAGCAACACACATTAATAAA+AGG - chr1_2:50350417-50350436 None:intergenic 25.0%
!! TTTTGCTTTACATACTAACT+CGG - chr1_2:50351149-50351168 None:intergenic 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG + chr1_2:50351347-50351366 Msa0075220:CDS 25.0%
! TTGTGATCTTTGCTAAAATT+TGG + chr1_2:50351597-50351616 Msa0075220:intron 25.0%
!! TCATACATGTTTTCTGAATT+TGG + chr1_2:50351684-50351703 Msa0075220:intron 25.0%
!! CATACATGTTTTCTGAATTT+GGG + chr1_2:50351685-50351704 Msa0075220:intron 25.0%
!! TTACTGTTCCAACTAATTTT+TGG + chr1_2:50351821-50351840 Msa0075220:intron 25.0%
! GATGAGAGAAGTTATAATTA+AGG - chr1_2:50352014-50352033 None:intergenic 25.0%
! AAGAAAATGAATACAACTAG+GGG - chr1_2:50352172-50352191 None:intergenic 25.0%
! GAAAGAAAATGAATACAACT+AGG - chr1_2:50352174-50352193 None:intergenic 25.0%
! CTTTCCTCAAATAAATTAGA+AGG - chr1_2:50352425-50352444 None:intergenic 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr1_2:50352572-50352591 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr1_2:50352569-50352588 Msa0075220:CDS 25.0%
!! AGTATTTTCAAAGAACACTA+CGG - chr1_2:50352868-50352887 None:intergenic 25.0%
!! ATTAGCTGCATCATTTTATA+AGG + chr1_2:50352985-50353004 Msa0075220:intron 25.0%
!!! TCTGTGCTTCATTTTTTTTT+TGG + chr1_2:50353083-50353102 Msa0075220:intron 25.0%
!! AACATGTTTCTTGTTTAATC+TGG + chr1_2:50353147-50353166 Msa0075220:intron 25.0%
!!! CTTTTGTGTCAGTTTTTTAA+TGG - chr1_2:50353236-50353255 None:intergenic 25.0%
! TAATTCATCTTCTTCCATAA+AGG + chr1_2:50353327-50353346 Msa0075220:CDS 25.0%
!! AGAAAATAGTTTATTGGTTG+GGG + chr1_2:50353444-50353463 Msa0075220:CDS 25.0%
!! ACTAATTTTACCTGCTTTAA+AGG - chr1_2:50353580-50353599 None:intergenic 25.0%
!! GACAATTTTCTATTATCTGT+TGG + chr1_2:50353603-50353622 Msa0075220:intron 25.0%
! TAATGACTCAAGTTAAAATG+GGG - chr1_2:50353633-50353652 None:intergenic 25.0%
! GTTAATGACTCAAGTTAAAA+TGG - chr1_2:50353635-50353654 None:intergenic 25.0%
! TACTGAAAGTAAAACTAACT+GGG - chr1_2:50353672-50353691 None:intergenic 25.0%
! TTACTGAAAGTAAAACTAAC+TGG - chr1_2:50353673-50353692 None:intergenic 25.0%
! GTCACTGTATATGTAATATT+AGG + chr1_2:50353707-50353726 Msa0075220:intron 25.0%
!! AGATAGCATCAATTTTATCA+TGG - chr1_2:50353741-50353760 None:intergenic 25.0%
!! ACACAATTAATCAAAAGTGT+CGG + chr1_2:50353778-50353797 Msa0075220:intron 25.0%
! AAAAAATTGGGTACTTTGTT+TGG - chr1_2:50353855-50353874 None:intergenic 25.0%
!!! AGTAATTTTTGGTACATACT+TGG + chr1_2:50353884-50353903 Msa0075220:intron 25.0%
! TATTGAAACATATGATATGC+AGG + chr1_2:50354177-50354196 Msa0075220:intron 25.0%
! TATGTTATACCTTCAGATTT+CGG - chr1_2:50354621-50354640 None:intergenic 25.0%
! AAAGGAATAACTTTCTTGAA+TGG + chr1_2:50354847-50354866 Msa0075220:intron 25.0%
!!! TTTGTTGCTTTTCTTTCTAA+TGG + chr1_2:50354982-50355001 Msa0075220:intron 25.0%
! GATATGCAATATCTCAATAT+TGG - chr1_2:50355229-50355248 None:intergenic 25.0%
! AAAGAAGCTAATAACAAAAC+AGG - chr1_2:50355251-50355270 None:intergenic 25.0%
! CTTTCAACTAGATTTCATTA+TGG + chr1_2:50355267-50355286 Msa0075220:intron 25.0%
! ATTCAACAAGTAAAAACAGT+TGG - chr1_2:50355555-50355574 None:intergenic 25.0%
!! TAACAATCTTTTGATATGAC+AGG - chr1_2:50355635-50355654 None:intergenic 25.0%
!! ATATCCTGTGTACTAATTTT+CGG + chr1_2:50356185-50356204 Msa0075220:three_prime_UTR 25.0%
! TCATACTCGTCTTTAATTTC+AGG + chr1_2:50348468-50348487 Msa0075220:five_prime_UTR 30.0%
! TCTCCATTTGAATTTTTCCA+TGG + chr1_2:50348617-50348636 Msa0075220:exon 30.0%
TGAGGATTACTTAACTAATG+TGG + chr1_2:50348863-50348882 Msa0075220:CDS 30.0%
! GTTACTGTTTCTCAATAAAC+AGG + chr1_2:50349116-50349135 Msa0075220:intron 30.0%
! TACTGTTTCTCAATAAACAG+GGG + chr1_2:50349118-50349137 Msa0075220:intron 30.0%
AAGGTATGCAAAATTTCTTC+CGG - chr1_2:50349242-50349261 None:intergenic 30.0%
ACATACCAACTGTTAATACA+AGG - chr1_2:50349261-50349280 None:intergenic 30.0%
!! TTAACTTGCTTCCTATTTGT+TGG + chr1_2:50349317-50349336 Msa0075220:intron 30.0%
ACACAAGATAACCAACAAAT+AGG - chr1_2:50349331-50349350 None:intergenic 30.0%
! TATTTGTTGGTTATCTTGTG+TGG + chr1_2:50349330-50349349 Msa0075220:intron 30.0%
! ATTTGTTGGTTATCTTGTGT+GGG + chr1_2:50349331-50349350 Msa0075220:intron 30.0%
ATTGATAAACTCACACTTGA+GGG - chr1_2:50349491-50349510 None:intergenic 30.0%
AATTGATAAACTCACACTTG+AGG - chr1_2:50349492-50349511 None:intergenic 30.0%
!!! TAAGGTTTTAGGTTACAATG+TGG - chr1_2:50349743-50349762 None:intergenic 30.0%
CATTGTAACCTAAAACCTTA+AGG + chr1_2:50349743-50349762 Msa0075220:intron 30.0%
!! ATGTTTTTGCTGTCTTATGA+AGG + chr1_2:50350009-50350028 Msa0075220:intron 30.0%
GGAATAGTTAATCTATAAGG+GGG - chr1_2:50350143-50350162 None:intergenic 30.0%
TGTAGAATACAACAAATCAC+AGG - chr1_2:50350164-50350183 None:intergenic 30.0%
TCATCCAATCGTCTTAAATA+CGG - chr1_2:50350292-50350311 None:intergenic 30.0%
AATCCAAAAGAAAGAAGAAG+AGG - chr1_2:50350495-50350514 None:intergenic 30.0%
ATATAAGTATAGTGTGAAGC+AGG - chr1_2:50350535-50350554 None:intergenic 30.0%
AAGATAAACTCAAACTCGAT+TGG - chr1_2:50350914-50350933 None:intergenic 30.0%
AGTACATTGCTGACAATTAT+AGG - chr1_2:50351391-50351410 None:intergenic 30.0%
AATGTACTTGAATGTACATC+AGG + chr1_2:50351403-50351422 Msa0075220:CDS 30.0%
! TACCAAGCAAAAAACACTTT+TGG + chr1_2:50351477-50351496 Msa0075220:CDS 30.0%
!!! ATCCAAAAGTGTTTTTTGCT+TGG - chr1_2:50351482-50351501 None:intergenic 30.0%
! TGTGAAAACTATTGATTGCT+TGG + chr1_2:50351501-50351520 Msa0075220:CDS 30.0%
! AAACTATTGATTGCTTGGAT+TGG + chr1_2:50351506-50351525 Msa0075220:CDS 30.0%
AAGTTTCTCTTAATCCCAAA+AGG - chr1_2:50351720-50351739 None:intergenic 30.0%
ATGAAGTATGACTTGAGTAA+TGG - chr1_2:50351761-50351780 None:intergenic 30.0%
TGAATGTCTTGAAAAGATGT+TGG + chr1_2:50351789-50351808 Msa0075220:intron 30.0%
AATTAGTTGGAACAGTAACT+TGG - chr1_2:50351819-50351838 None:intergenic 30.0%
TAGATCAAGCAAAAAGAACA+GGG - chr1_2:50352122-50352141 None:intergenic 30.0%
GTGTGACAAACTATATAGAA+AGG - chr1_2:50352196-50352215 None:intergenic 30.0%
AATTTGCACCAATTCTTTAC+TGG + chr1_2:50352335-50352354 Msa0075220:CDS 30.0%
ATTTGCACCAATTCTTTACT+GGG + chr1_2:50352336-50352355 Msa0075220:CDS 30.0%
!!! AGGTTTTGAAACTGAAAGAT+TGG + chr1_2:50352396-50352415 Msa0075220:CDS 30.0%
TCCTCAAATAAATTAGAAGG+AGG - chr1_2:50352422-50352441 None:intergenic 30.0%
GGATCTGTATATTCTTTGAA+CGG - chr1_2:50352485-50352504 None:intergenic 30.0%
GAATATACAGATCCTTTCAA+TGG + chr1_2:50352491-50352510 Msa0075220:CDS 30.0%
! ATTCATAGTCTTTCTAGCAT+TGG + chr1_2:50352666-50352685 Msa0075220:intron 30.0%
!! TTGAAAGGTGCATAGTTTTT+AGG + chr1_2:50352755-50352774 Msa0075220:intron 30.0%
!!! GTGTTACTTACCTTTTGTTT+TGG + chr1_2:50352925-50352944 Msa0075220:intron 30.0%
TTAGCAGTAACCAAAACAAA+AGG - chr1_2:50352938-50352957 None:intergenic 30.0%
ATGGATCTGCTAATAAGTAT+AGG - chr1_2:50353040-50353059 None:intergenic 30.0%
TGAATGCATACTCTATTATG+AGG + chr1_2:50353117-50353136 Msa0075220:intron 30.0%
!!! CTTGTTTAATCTGGCTTTTT+AGG + chr1_2:50353156-50353175 Msa0075220:intron 30.0%
TTATCAAGCATGTCAATCTT+GGG - chr1_2:50353310-50353329 None:intergenic 30.0%
ATTATCAAGCATGTCAATCT+TGG - chr1_2:50353311-50353330 None:intergenic 30.0%
AAGTGGAATATGTGATGAAA+AGG + chr1_2:50353390-50353409 Msa0075220:CDS 30.0%
! GAAAATAGTTTATTGGTTGG+GGG + chr1_2:50353445-50353464 Msa0075220:CDS 30.0%
TGTATAACAATAAACTGAGC+TGG - chr1_2:50353996-50354015 None:intergenic 30.0%
TTGTTATACATGACAGTCTT+TGG + chr1_2:50354006-50354025 Msa0075220:intron 30.0%
TGTTATACATGACAGTCTTT+GGG + chr1_2:50354007-50354026 Msa0075220:intron 30.0%
ATTCCTTATTCATGTCATGA+CGG - chr1_2:50354137-50354156 None:intergenic 30.0%
AACACCTTCTTTGATATTGT+AGG + chr1_2:50354350-50354369 Msa0075220:intron 30.0%
ACAACCTACAATATCAAAGA+AGG - chr1_2:50354357-50354376 None:intergenic 30.0%
TCAAATAAAACGTCTGATCA+TGG - chr1_2:50354389-50354408 None:intergenic 30.0%
!! ACAATTCAACATTGACTTGT+AGG + chr1_2:50354523-50354542 Msa0075220:intron 30.0%
AGAAGAGAGAGAATACATAT+AGG + chr1_2:50354735-50354754 Msa0075220:intron 30.0%
ATTCCCATCAGTATATTCAT+GGG + chr1_2:50354776-50354795 Msa0075220:intron 30.0%
! GTAGTGAAGATTTTCTTTCA+CGG - chr1_2:50354911-50354930 None:intergenic 30.0%
GAGCTAGTGATAGATAATTT+AGG - chr1_2:50354950-50354969 None:intergenic 30.0%
TTTGTCTCTCCTGAAAATAT+TGG + chr1_2:50355079-50355098 Msa0075220:CDS 30.0%
TCAAATCAACAAATGTAGCA+TGG - chr1_2:50355185-50355204 None:intergenic 30.0%
!! CAGATTCTAAAACAGCTATT+GGG - chr1_2:50355293-50355312 None:intergenic 30.0%
!!! CAATAGCTGTTTTAGAATCT+GGG + chr1_2:50355292-50355311 Msa0075220:intron 30.0%
!! AGTAACATAGGTTCTGAAAT+AGG - chr1_2:50355599-50355618 None:intergenic 30.0%
CAAGTATGATACAGTAACAT+AGG - chr1_2:50355611-50355630 None:intergenic 30.0%
TATCACAAATCCATAACCAT+AGG - chr1_2:50355794-50355813 None:intergenic 30.0%
ATGTCTGTCATTCAATTTAC+AGG + chr1_2:50355935-50355954 Msa0075220:intron 30.0%
GATACATCTACAGTTTACAT+AGG - chr1_2:50355979-50355998 None:intergenic 30.0%
!! AGTCCATATTTTGTTATGTC+TGG + chr1_2:50356091-50356110 Msa0075220:three_prime_UTR 30.0%
GTTTAAAAAATGCTTCCTCA+AGG - chr1_2:50356121-50356140 None:intergenic 30.0%
! TATCCTGTGTACTAATTTTC+GGG + chr1_2:50356186-50356205 Msa0075220:three_prime_UTR 30.0%
GAAAATTGGAATGTAAACGG+CGG - chr1_2:50348568-50348587 None:intergenic 35.0%
! CCATTTGAATTTTTCCATGG+CGG + chr1_2:50348620-50348639 Msa0075220:exon 35.0%
! CATTTGAATTTTTCCATGGC+GGG + chr1_2:50348621-50348640 Msa0075220:exon 35.0%
! ATTTGAATTTTTCCATGGCG+GGG + chr1_2:50348622-50348641 Msa0075220:exon 35.0%
GGTTTCTTGATTATCAGGAA+TGG - chr1_2:50348697-50348716 None:intergenic 35.0%
GCTATGGTTTCTTGATTATC+AGG - chr1_2:50348702-50348721 None:intergenic 35.0%
GAATAGTAGATCGTTGAATG+AGG + chr1_2:50348845-50348864 Msa0075220:CDS 35.0%
GGATTACTTAACTAATGTGG+AGG + chr1_2:50348866-50348885 Msa0075220:CDS 35.0%
TTACTTAACTAATGTGGAGG+AGG + chr1_2:50348869-50348888 Msa0075220:CDS 35.0%
CTGGAACTGAAGAAGATTAA+GGG + chr1_2:50348894-50348913 Msa0075220:CDS 35.0%
TGGAACTGAAGAAGATTAAG+GGG + chr1_2:50348895-50348914 Msa0075220:CDS 35.0%
GATTGAAGATGTGTCCTTAT+TGG + chr1_2:50349140-50349159 Msa0075220:CDS 35.0%
! GTCCTTATTGGTCTGTAATA+AGG + chr1_2:50349152-50349171 Msa0075220:CDS 35.0%
GTCCTTATTACAGACCAATA+AGG - chr1_2:50349157-50349176 None:intergenic 35.0%
TAAAAGAAATGACAAGGGCA+GGG + chr1_2:50349194-50349213 Msa0075220:CDS 35.0%
GCATACCTTGTATTAACAGT+TGG + chr1_2:50349253-50349272 Msa0075220:CDS 35.0%
! TTTGTTGGTTATCTTGTGTG+GGG + chr1_2:50349332-50349351 Msa0075220:intron 35.0%
CACTTTAACCCAAAACCTTA+AGG + chr1_2:50349423-50349442 Msa0075220:intron 35.0%
TTGATAAACTCACACTTGAG+GGG - chr1_2:50349490-50349509 None:intergenic 35.0%
ATGAAAGAACTTCCACTTGA+GGG - chr1_2:50349527-50349546 None:intergenic 35.0%
AGTATAAGTGCAAGTGTATG+TGG - chr1_2:50349550-50349569 None:intergenic 35.0%
ATATCGAAAGTTCAGGTCAT+GGG - chr1_2:50349604-50349623 None:intergenic 35.0%
TATATCGAAAGTTCAGGTCA+TGG - chr1_2:50349605-50349624 None:intergenic 35.0%
TGACCTGAACTTTCGATATA+AGG + chr1_2:50349605-50349624 Msa0075220:intron 35.0%
AACCTAAAACCTTAAGGCAA+TGG + chr1_2:50349749-50349768 Msa0075220:intron 35.0%
ACCTAAAACCTTAAGGCAAT+GGG + chr1_2:50349750-50349769 Msa0075220:intron 35.0%
TTCAATAACAAGACGTTGTG+TGG - chr1_2:50349850-50349869 None:intergenic 35.0%
!! GTCTTGTTATTGAATGAGAC+TGG + chr1_2:50349856-50349875 Msa0075220:intron 35.0%
AAGACAGCAAAAACATACAC+TGG - chr1_2:50350005-50350024 None:intergenic 35.0%
! TCTTCCGTATTTAAGACGAT+TGG + chr1_2:50350285-50350304 Msa0075220:CDS 35.0%
ACGATTGGATGAAGAACAAA+TGG + chr1_2:50350300-50350319 Msa0075220:CDS 35.0%
! ACTCCTCTTCTTCTTTCTTT+TGG + chr1_2:50350489-50350508 Msa0075220:intron 35.0%
!!! CTCTTTTTTAGGGATATCTG+CGG - chr1_2:50350684-50350703 None:intergenic 35.0%
!!! AGTACACACGCTCTTTTTTA+GGG - chr1_2:50350694-50350713 None:intergenic 35.0%
! AGTTTGAGTTTATCTTCCGA+GGG + chr1_2:50350918-50350937 Msa0075220:CDS 35.0%
ACCATGATCACAATCATCAT+CGG - chr1_2:50351086-50351105 None:intergenic 35.0%
!! AATTAAGCTTCAAGTTGCTG+TGG + chr1_2:50351183-50351202 Msa0075220:CDS 35.0%
ATGTCAGATGCATTCAAAAC+AGG - chr1_2:50351241-50351260 None:intergenic 35.0%
ACAGTATAAGAAGTTCTCAC+TGG - chr1_2:50351302-50351321 None:intergenic 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr1_2:50351353-50351372 Msa0075220:CDS 35.0%
AATGTACATCAGGTTTAAGC+TGG + chr1_2:50351413-50351432 Msa0075220:CDS 35.0%
ATGTACATCAGGTTTAAGCT+GGG + chr1_2:50351414-50351433 Msa0075220:CDS 35.0%
CACAATACAAGCTCAAGATA+TGG - chr1_2:50351582-50351601 None:intergenic 35.0%
! TTTGGGTATTTCCATCCTTT+TGG + chr1_2:50351702-50351721 Msa0075220:intron 35.0%
! TTGGGTATTTCCATCCTTTT+GGG + chr1_2:50351703-50351722 Msa0075220:intron 35.0%
TTCTCTTAATCCCAAAAGGA+TGG - chr1_2:50351716-50351735 None:intergenic 35.0%
!! CTGTTCCAACTAATTTTTGG+CGG + chr1_2:50351824-50351843 Msa0075220:intron 35.0%
AAAAACGTGTCTAGACTAGA+TGG + chr1_2:50351862-50351881 Msa0075220:intron 35.0%
ATAGAACTTTAACCTTGTGC+TGG - chr1_2:50351914-50351933 None:intergenic 35.0%
CTCATCTTTCTCTTAGTCAT+AGG + chr1_2:50352028-50352047 Msa0075220:intron 35.0%
GTAGATCAAGCAAAAAGAAC+AGG - chr1_2:50352123-50352142 None:intergenic 35.0%
!! AAGGGCAACAAAAAGTACTT+CGG - chr1_2:50352145-50352164 None:intergenic 35.0%
CAGATAGACATGTCATGTAA+AGG - chr1_2:50352259-50352278 None:intergenic 35.0%
TTGTGTACCCAGTAAAGAAT+TGG - chr1_2:50352346-50352365 None:intergenic 35.0%
ATTCTTTACTGGGTACACAA+AGG + chr1_2:50352346-50352365 Msa0075220:CDS 35.0%
TCTTTCAGTTTCAAAACCTG+AGG - chr1_2:50352395-50352414 None:intergenic 35.0%
GCCTCCTTCTAATTTATTTG+AGG + chr1_2:50352418-50352437 Msa0075220:CDS 35.0%
TGTATATTCTTTGAACGGCA+AGG - chr1_2:50352480-50352499 None:intergenic 35.0%
! AGGTTTAGAACACCATTGAA+AGG - chr1_2:50352506-50352525 None:intergenic 35.0%
TCTGGCTGTAAAACATCTTT+AGG - chr1_2:50352542-50352561 None:intergenic 35.0%
! TATTGCTTATGGATTTGCTC+AGG + chr1_2:50352580-50352599 Msa0075220:CDS 35.0%
CATGGTGTAAAAGCTTACAA+AGG - chr1_2:50352793-50352812 None:intergenic 35.0%
GTGCAACAAGCAAAAAAGTA+AGG - chr1_2:50352846-50352865 None:intergenic 35.0%
! GCAAAATAGTGTTCGATTTG+TGG + chr1_2:50353360-50353379 Msa0075220:CDS 35.0%
! AGTGTTCGATTTGTGGAAAA+TGG + chr1_2:50353367-50353386 Msa0075220:CDS 35.0%
TTATCAACTTCTTTGAGCTC+TGG - chr1_2:50353424-50353443 None:intergenic 35.0%
GATACACATGAGTACTTCTT+GGG - chr1_2:50353833-50353852 None:intergenic 35.0%
TTTGGGTACATCTTGAATGT+TGG + chr1_2:50353928-50353947 Msa0075220:intron 35.0%
TAAAACGTCTGATCATGGAT+GGG - chr1_2:50354384-50354403 None:intergenic 35.0%
ATAAAACGTCTGATCATGGA+TGG - chr1_2:50354385-50354404 None:intergenic 35.0%
TGACTATCGAGCATAAAAAG+AGG + chr1_2:50354406-50354425 Msa0075220:CDS 35.0%
TATACACTTTGTGGCAAACA+AGG - chr1_2:50354685-50354704 None:intergenic 35.0%
GATTCCCATCAGTATATTCA+TGG + chr1_2:50354775-50354794 Msa0075220:intron 35.0%
TTCCCATCAGTATATTCATG+GGG + chr1_2:50354777-50354796 Msa0075220:intron 35.0%
GGAATAACTTTCTTGAATGG+TGG + chr1_2:50354850-50354869 Msa0075220:intron 35.0%
! TGAAGATTTTCTTTCACGGT+TGG - chr1_2:50354907-50354926 None:intergenic 35.0%
TGTGATTTACTGGAAGTTTG+CGG - chr1_2:50355132-50355151 None:intergenic 35.0%
!! CCAGATTCTAAAACAGCTAT+TGG - chr1_2:50355294-50355313 None:intergenic 35.0%
!!! CCAATAGCTGTTTTAGAATC+TGG + chr1_2:50355291-50355310 Msa0075220:intron 35.0%
CTTGGCTTATTGGAACAATT+TGG + chr1_2:50355315-50355334 Msa0075220:intron 35.0%
AACCTATTAGTGTTTGGATC+TGG - chr1_2:50355395-50355414 None:intergenic 35.0%
CAGTTCAACCTATTAGTGTT+TGG - chr1_2:50355401-50355420 None:intergenic 35.0%
! CAAACACTAATAGGTTGAAC+TGG + chr1_2:50355399-50355418 Msa0075220:intron 35.0%
!! TATCTGATTGCTGCTTCTTT+TGG + chr1_2:50355681-50355700 Msa0075220:intron 35.0%
!! TTGCTGCTTCTTTTGGTAAA+AGG + chr1_2:50355688-50355707 Msa0075220:intron 35.0%
TATGTATGCTATGCTTGATC+TGG + chr1_2:50355724-50355743 Msa0075220:CDS 35.0%
GGTTAGTGATTGCAAACTTT+AGG + chr1_2:50355768-50355787 Msa0075220:intron 35.0%
AAACTTTAGGCCTATGGTTA+TGG + chr1_2:50355781-50355800 Msa0075220:intron 35.0%
! CTTTAGTTTCTTTAGGCTCA+CGG + chr1_2:50355887-50355906 Msa0075220:intron 35.0%
TGTCATTCAATTTACAGGTC+TGG + chr1_2:50355940-50355959 Msa0075220:intron 35.0%
TACAGTTTACATAGGAACCT+TGG - chr1_2:50355971-50355990 None:intergenic 35.0%
TGTATCTCAGAGATTGAATC+TGG + chr1_2:50355993-50356012 Msa0075220:three_prime_UTR 35.0%
TCAGAGATTGAATCTGGATA+GGG + chr1_2:50355999-50356018 Msa0075220:three_prime_UTR 35.0%
TAAATTTGAGTCGCGTAGTT+AGG + chr1_2:50356025-50356044 Msa0075220:three_prime_UTR 35.0%
TCTTTGTATTGCAACTGTAG+AGG + chr1_2:50356064-50356083 Msa0075220:three_prime_UTR 35.0%
GTGCCAGACATAACAAAATA+TGG - chr1_2:50356097-50356116 None:intergenic 35.0%
CTTGTAATGGTGTTCTTACA+AGG + chr1_2:50356150-50356169 Msa0075220:three_prime_UTR 35.0%
TAGTACACAGGATATACAAG+TGG - chr1_2:50356180-50356199 None:intergenic 35.0%
AAACCCGAAAATTAGTACAC+AGG - chr1_2:50356192-50356211 None:intergenic 35.0%
!!! TACTAATTTTCGGGTTTGTC+TGG + chr1_2:50356195-50356214 Msa0075220:three_prime_UTR 35.0%
AAACCCATCAGTATCTAGCT+AGG + chr1_2:50348531-50348550 Msa0075220:five_prime_UTR 40.0%
AACCCATCAGTATCTAGCTA+GGG + chr1_2:50348532-50348551 Msa0075220:five_prime_UTR 40.0%
AACCCTAGCTAGATACTGAT+GGG - chr1_2:50348537-50348556 None:intergenic 40.0%
AAACCCTAGCTAGATACTGA+TGG - chr1_2:50348538-50348557 None:intergenic 40.0%
CCGCCATGGAAAAATTCAAA+TGG - chr1_2:50348623-50348642 None:intergenic 40.0%
! TTTGAATTTTTCCATGGCGG+GGG + chr1_2:50348623-50348642 Msa0075220:exon 40.0%
! AACAACACAGTTGCTTTCAC+AGG + chr1_2:50348663-50348682 Msa0075220:CDS 40.0%
! ACAACACAGTTGCTTTCACA+GGG + chr1_2:50348664-50348683 Msa0075220:CDS 40.0%
ACGTGGCAGAAAGAGAAAAA+CGG + chr1_2:50348770-50348789 Msa0075220:CDS 40.0%
CAGAAAGAGAAAAACGGAGA+AGG + chr1_2:50348776-50348795 Msa0075220:CDS 40.0%
GCTGGAACTGAAGAAGATTA+AGG + chr1_2:50348893-50348912 Msa0075220:CDS 40.0%
AAGAAGATTAAGGGGAAACG+TGG + chr1_2:50348903-50348922 Msa0075220:CDS 40.0%
TGATGAAATCAATGCTGCTC+AGG + chr1_2:50348962-50348981 Msa0075220:CDS 40.0%
! TGTTGCTGTTCAATGCATTC+AGG - chr1_2:50348999-50349018 None:intergenic 40.0%
ATGCATTGAACAGCAACAGA+TGG + chr1_2:50349001-50349020 Msa0075220:CDS 40.0%
GTAAAAGAAATGACAAGGGC+AGG + chr1_2:50349193-50349212 Msa0075220:CDS 40.0%
AGCAACTAGACAAGTGAGTT+TGG + chr1_2:50349394-50349413 Msa0075220:intron 40.0%
AACCCAAAACCTTAAGGCAT+TGG + chr1_2:50349429-50349448 Msa0075220:intron 40.0%
! ACCCAAAACCTTAAGGCATT+GGG + chr1_2:50349430-50349449 Msa0075220:intron 40.0%
! ACCCAATGCCTTAAGGTTTT+GGG - chr1_2:50349434-50349453 None:intergenic 40.0%
! AACCCAATGCCTTAAGGTTT+TGG - chr1_2:50349435-50349454 None:intergenic 40.0%
!! ACCTTAAGGCATTGGGTTTA+AGG + chr1_2:50349437-50349456 Msa0075220:intron 40.0%
!! CCTTAAGGCATTGGGTTTAA+GGG + chr1_2:50349438-50349457 Msa0075220:intron 40.0%
TGAAAGAACTTCCACTTGAG+GGG - chr1_2:50349526-50349545 None:intergenic 40.0%
GATGAAAGAACTTCCACTTG+AGG - chr1_2:50349528-50349547 None:intergenic 40.0%
GCTCCTTATATCGAAAGTTC+AGG - chr1_2:50349611-50349630 None:intergenic 40.0%
GAACTTTCGATATAAGGAGC+CGG + chr1_2:50349611-50349630 Msa0075220:intron 40.0%
! ACCCATTGCCTTAAGGTTTT+AGG - chr1_2:50349754-50349773 None:intergenic 40.0%
! ACCTTAAGGCAATGGGTTTA+TGG + chr1_2:50349757-50349776 Msa0075220:intron 40.0%
TCCATAAACCCATTGCCTTA+AGG - chr1_2:50349761-50349780 None:intergenic 40.0%
! AAGGTATCCTGACTTGAAAG+AGG + chr1_2:50350028-50350047 Msa0075220:intron 40.0%
TTGCAATTGCAAAGCATGCT+TGG + chr1_2:50350088-50350107 Msa0075220:CDS 40.0%
! GTGATAATCTGGTTCACTAC+AGG + chr1_2:50350192-50350211 Msa0075220:intron 40.0%
!! TCATGGTCATTGTTGGTTTC+TGG - chr1_2:50350232-50350251 None:intergenic 40.0%
AGAAACCAACAATGACCATG+AGG + chr1_2:50350231-50350250 Msa0075220:CDS 40.0%
TGAAGAACAAATGGCTGAGA+AGG + chr1_2:50350309-50350328 Msa0075220:CDS 40.0%
GAGATAGAAGCAAAGAGACA+AGG + chr1_2:50350331-50350350 Msa0075220:CDS 40.0%
ATTGCAAGAAGTGAGACTCT+TGG - chr1_2:50350367-50350386 None:intergenic 40.0%
!!! GTTGCTTTTCTCATGCTTCA+TGG + chr1_2:50350430-50350449 Msa0075220:intron 40.0%
!! TCTTTGGGATGAACATTGCA+GGG + chr1_2:50350630-50350649 Msa0075220:intron 40.0%
!!! CAGTACACACGCTCTTTTTT+AGG - chr1_2:50350695-50350714 None:intergenic 40.0%
! CTAAAAAAGAGCGTGTGTAC+TGG + chr1_2:50350693-50350712 Msa0075220:CDS 40.0%
! AGCATTTTGTACAGCTTCTG+TGG - chr1_2:50350826-50350845 None:intergenic 40.0%
! GAGTTTGAGTTTATCTTCCG+AGG + chr1_2:50350917-50350936 Msa0075220:CDS 40.0%
TCTTGACCATTCACGAATCT+CGG - chr1_2:50351017-50351036 None:intergenic 40.0%
ATTCGTGAATGGTCAAGATC+TGG + chr1_2:50351019-50351038 Msa0075220:CDS 40.0%
!!! TCACAATCATCATCGGCTTT+TGG - chr1_2:50351079-50351098 None:intergenic 40.0%
GAAGTATGCTTCTCAGTTCA+AGG - chr1_2:50351111-50351130 None:intergenic 40.0%
! AACTCGGAGATGCAATTTTG+TGG - chr1_2:50351133-50351152 None:intergenic 40.0%
CTGACATACACAATAGCACA+AGG + chr1_2:50351254-50351273 Msa0075220:CDS 40.0%
CATACACAATAGCACAAGGA+AGG + chr1_2:50351258-50351277 Msa0075220:CDS 40.0%
AGAACTTCTTATACTGTCCC+AGG + chr1_2:50351305-50351324 Msa0075220:CDS 40.0%
GAACTTCTTATACTGTCCCA+GGG + chr1_2:50351306-50351325 Msa0075220:CDS 40.0%
GCTTGGTATTACGTATCTGA+CGG - chr1_2:50351465-50351484 None:intergenic 40.0%
ACTGTCCGCCAAAAATTAGT+TGG - chr1_2:50351832-50351851 None:intergenic 40.0%
TGAGAAATTGAGAGACACTG+AGG - chr1_2:50352054-50352073 None:intergenic 40.0%
AATACAACTAGGGGATGCAA+GGG - chr1_2:50352163-50352182 None:intergenic 40.0%
! TCTGAGATGTTGATTGATGC+AGG + chr1_2:50352304-50352323 Msa0075220:intron 40.0%
! CTGAGATGTTGATTGATGCA+GGG + chr1_2:50352305-50352324 Msa0075220:intron 40.0%
ATATGAACTCGGCACAATGA+CGG - chr1_2:50352454-50352473 None:intergenic 40.0%
! AGATGTTTTACAGCCAGACA+TGG + chr1_2:50352544-50352563 Msa0075220:CDS 40.0%
! GATGTTTTACAGCCAGACAT+GGG + chr1_2:50352545-50352564 Msa0075220:CDS 40.0%
CTGCATCTGACATATCACAA+TGG - chr1_2:50352637-50352656 None:intergenic 40.0%
GGCATGTACTTGAAACTACA+AGG - chr1_2:50352825-50352844 None:intergenic 40.0%
ATGAAGCACAGACAAAGAAC+TGG - chr1_2:50353075-50353094 None:intergenic 40.0%
TCATATTGCTGAAGTGAAGC+TGG + chr1_2:50353192-50353211 Msa0075220:CDS 40.0%
TGAAGTGAAGCTGGATTCTA+AGG + chr1_2:50353201-50353220 Msa0075220:CDS 40.0%
GAAGTGAAGCTGGATTCTAA+GGG + chr1_2:50353202-50353221 Msa0075220:CDS 40.0%
TTGCTCGTATGAAGCCTTTA+TGG - chr1_2:50353344-50353363 None:intergenic 40.0%
CGATTTGTGGAAAATGGAAG+TGG + chr1_2:50353373-50353392 Msa0075220:CDS 40.0%
GTTGGGGGAAATTCTTTAGA+CGG + chr1_2:50353460-50353479 Msa0075220:CDS 40.0%
GAGAGAGGATGTACCTAAAT+TGG + chr1_2:50353504-50353523 Msa0075220:CDS 40.0%
!! AGAAGCATTTCAGAGAGTTC+AGG + chr1_2:50353539-50353558 Msa0075220:CDS 40.0%
TTGATGCTATCTCTCCTTGT+CGG + chr1_2:50353749-50353768 Msa0075220:intron 40.0%
GGATACACATGAGTACTTCT+TGG - chr1_2:50353834-50353853 None:intergenic 40.0%
ATTCAAGATGTACCCAAACC+CGG - chr1_2:50353926-50353945 None:intergenic 40.0%
GTACCGTCATGACATGAATA+AGG + chr1_2:50354131-50354150 Msa0075220:intron 40.0%
AAAACGTCTGATCATGGATG+GGG - chr1_2:50354383-50354402 None:intergenic 40.0%
CGAGCATAAAAAGAGGCTTA+AGG + chr1_2:50354413-50354432 Msa0075220:CDS 40.0%
GCATAAAAAGAGGCTTAAGG+AGG + chr1_2:50354416-50354435 Msa0075220:CDS 40.0%
AGCTTCTGAACAAAAGTCCA+GGG - chr1_2:50354556-50354575 None:intergenic 40.0%
! TGGACTTTTGTTCAGAAGCT+GGG + chr1_2:50354556-50354575 Msa0075220:CDS 40.0%
ATACCTTCAGATTTCGGACT+TGG - chr1_2:50354615-50354634 None:intergenic 40.0%
GCCACAAAGTGTATATGTTG+CGG + chr1_2:50354690-50354709 Msa0075220:intron 40.0%
ACCGCAACATATACACTTTG+TGG - chr1_2:50354694-50354713 None:intergenic 40.0%
! ATGTTGCGGTTGTGAGTTTT+AGG + chr1_2:50354704-50354723 Msa0075220:intron 40.0%
GTCCCCATGAATATACTGAT+GGG - chr1_2:50354782-50354801 None:intergenic 40.0%
AGTCCCCATGAATATACTGA+TGG - chr1_2:50354783-50354802 None:intergenic 40.0%
TTCATGGGGACTGATATTCT+TGG + chr1_2:50354791-50354810 Msa0075220:intron 40.0%
TCATGGGGACTGATATTCTT+GGG + chr1_2:50354792-50354811 Msa0075220:intron 40.0%
GACAAAATCAAGTGCAACCT+TGG - chr1_2:50355065-50355084 None:intergenic 40.0%
! AAGCACTCGCCAATATTTTC+AGG - chr1_2:50355091-50355110 None:intergenic 40.0%
TCTGCAGACTTGTGATTTAC+TGG - chr1_2:50355142-50355161 None:intergenic 40.0%
AGTAAATCACAAGTCTGCAG+AGG + chr1_2:50355141-50355160 Msa0075220:CDS 40.0%
AACATGACAGTGACATCACT+AGG - chr1_2:50355364-50355383 None:intergenic 40.0%
GTCCAGATCCAAACACTAAT+AGG + chr1_2:50355390-50355409 Msa0075220:intron 40.0%
CGTCTTGATTCTAAACCACA+AGG + chr1_2:50355480-50355499 Msa0075220:intron 40.0%
GATTGCAAACTTTAGGCCTA+TGG + chr1_2:50355775-50355794 Msa0075220:intron 40.0%
CTCAGAGATTGAATCTGGAT+AGG + chr1_2:50355998-50356017 Msa0075220:three_prime_UTR 40.0%
! CAACACAGTTGCTTTCACAG+GGG + chr1_2:50348665-50348684 Msa0075220:CDS 45.0%
GCATCAACAGAAGCTTCATC+AGG - chr1_2:50348729-50348748 None:intergenic 45.0%
TTTCTGCCACGTTTCTTTGC+CGG - chr1_2:50348762-50348781 None:intergenic 45.0%
! TCTCACACTTTCGCCCTTTT+CGG - chr1_2:50348805-50348824 None:intergenic 45.0%
! AAAAGGGCGAAAGTGTGAGA+AGG + chr1_2:50348805-50348824 Msa0075220:CDS 45.0%
AGATTAAGGGGAAACGTGGT+AGG + chr1_2:50348907-50348926 Msa0075220:CDS 45.0%
GAAACGTGGTAGGAAGAAGA+AGG + chr1_2:50348917-50348936 Msa0075220:CDS 45.0%
AGGAAGAAGAAGGTGGCAAT+TGG + chr1_2:50348927-50348946 Msa0075220:CDS 45.0%
AAGAAGGTGGCAATTGGTGT+CGG + chr1_2:50348933-50348952 Msa0075220:CDS 45.0%
TGAAATCAATGCTGCTCAGG+AGG + chr1_2:50348965-50348984 Msa0075220:CDS 45.0%
GAAATCAATGCTGCTCAGGA+GGG + chr1_2:50348966-50348985 Msa0075220:CDS 45.0%
AAATCAATGCTGCTCAGGAG+GGG + chr1_2:50348967-50348986 Msa0075220:CDS 45.0%
TGAAATGCACGGAATGCAAC+CGG + chr1_2:50349220-50349239 Msa0075220:CDS 45.0%
CCCTTAAACCCAATGCCTTA+AGG - chr1_2:50349441-50349460 None:intergenic 45.0%
ATTGTTCTGTAGCCAGTGAG+AGG - chr1_2:50349465-50349484 None:intergenic 45.0%
AAAGAACTTCCACTTGAGGG+GGG - chr1_2:50349524-50349543 None:intergenic 45.0%
GAAAGAACTTCCACTTGAGG+GGG - chr1_2:50349525-50349544 None:intergenic 45.0%
AACGGTGACTTTGACAATGG+CGG - chr1_2:50349577-50349596 None:intergenic 45.0%
TCCAACGGTGACTTTGACAA+TGG - chr1_2:50349580-50349599 None:intergenic 45.0%
CGACAATGGTATCAGAGTCA+GGG - chr1_2:50349653-50349672 None:intergenic 45.0%
CCTGACTCTGATACCATTGT+CGG + chr1_2:50349651-50349670 Msa0075220:intron 45.0%
CTGACTCTGATACCATTGTC+GGG + chr1_2:50349652-50349671 Msa0075220:intron 45.0%
AGTCTGGGGATTGTCTACAT+TGG + chr1_2:50349685-50349704 Msa0075220:intron 45.0%
GTCTGGGGATTGTCTACATT+GGG + chr1_2:50349686-50349705 Msa0075220:intron 45.0%
AGCAACCACACAAGTGAGTT+TGG + chr1_2:50349714-50349733 Msa0075220:intron 45.0%
GGTATCCAAACTCACTTGTG+TGG - chr1_2:50349722-50349741 None:intergenic 45.0%
! GTATCCTGACTTGAAAGAGG+AGG + chr1_2:50350031-50350050 Msa0075220:CDS 45.0%
! ATGTCCTCCTCTTTCAAGTC+AGG - chr1_2:50350038-50350057 None:intergenic 45.0%
GACATTGCCAAGAAATGTCC+AGG + chr1_2:50350053-50350072 Msa0075220:CDS 45.0%
ACAGCATCCTGGACATTTCT+TGG - chr1_2:50350063-50350082 None:intergenic 45.0%
AAGAAATGTCCAGGATGCTG+TGG + chr1_2:50350062-50350081 Msa0075220:CDS 45.0%
TTGCAATTACCACAGCATCC+TGG - chr1_2:50350074-50350093 None:intergenic 45.0%
GAACTGACCTTGATAAGTGC+AGG - chr1_2:50350119-50350138 None:intergenic 45.0%
CTCAACCTCATGGTCATTGT+TGG - chr1_2:50350239-50350258 None:intergenic 45.0%
!! GTCTTTGGGATGAACATTGC+AGG + chr1_2:50350629-50350648 Msa0075220:intron 45.0%
! AAAAGAGCGTGTGTACTGGT+AGG + chr1_2:50350697-50350716 Msa0075220:intron 45.0%
! AAAGAGCGTGTGTACTGGTA+GGG + chr1_2:50350698-50350717 Msa0075220:intron 45.0%
CTTGACCATTCACGAATCTC+GGG - chr1_2:50351016-50351035 None:intergenic 45.0%
GTGAATGGTCAAGATCTGGA+TGG + chr1_2:50351023-50351042 Msa0075220:CDS 45.0%
!!! TCATCATCGGCTTTTGGACA+GGG - chr1_2:50351073-50351092 None:intergenic 45.0%
!!! ATCATCATCGGCTTTTGGAC+AGG - chr1_2:50351074-50351093 None:intergenic 45.0%
GCCGATGATGATTGTGATCA+TGG + chr1_2:50351082-50351101 Msa0075220:CDS 45.0%
CTGTGGAGACTTCTGATAGT+AGG + chr1_2:50351200-50351219 Msa0075220:CDS 45.0%
TGACGTAGATTTACTGCCCT+GGG - chr1_2:50351325-50351344 None:intergenic 45.0%
ATGACGTAGATTTACTGCCC+TGG - chr1_2:50351326-50351345 None:intergenic 45.0%
GGCAGTAAATCTACGTCATG+AGG + chr1_2:50351327-50351346 Msa0075220:CDS 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr1_2:50351361-50351380 Msa0075220:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr1_2:50351362-50351381 Msa0075220:CDS 45.0%
AATGCACGCCACATGACAAA+CGG - chr1_2:50351442-50351461 None:intergenic 45.0%
!! TGATTGCTTGGATTGGTGTG+AGG + chr1_2:50351513-50351532 Msa0075220:CDS 45.0%
GAATACAACTAGGGGATGCA+AGG - chr1_2:50352164-50352183 None:intergenic 45.0%
TATGAACTCGGCACAATGAC+GGG - chr1_2:50352453-50352472 None:intergenic 45.0%
CGGCAAGGAAGATATGAACT+CGG - chr1_2:50352465-50352484 None:intergenic 45.0%
CTTTAGGCAACTTCACAGCA+AGG - chr1_2:50352526-50352545 None:intergenic 45.0%
!!! TATGTTTTTGGGCCCATGTC+TGG - chr1_2:50352560-50352579 None:intergenic 45.0%
! TATGGATTTGCTCAGGAGCT+TGG + chr1_2:50352587-50352606 Msa0075220:CDS 45.0%
! ATGGATTTGCTCAGGAGCTT+GGG + chr1_2:50352588-50352607 Msa0075220:CDS 45.0%
ACTACAAGGCTAACAGCTCA+TGG - chr1_2:50352811-50352830 None:intergenic 45.0%
GGGAGCTACATGGTGATAAT+CGG + chr1_2:50353275-50353294 Msa0075220:CDS 45.0%
GGAGCTACATGGTGATAATC+GGG + chr1_2:50353276-50353295 Msa0075220:CDS 45.0%
CTACATGGTGATAATCGGGA+CGG + chr1_2:50353280-50353299 Msa0075220:CDS 45.0%
ATTCTTTAGACGGTGCTCTC+TGG + chr1_2:50353470-50353489 Msa0075220:CDS 45.0%
TTCTTTAGACGGTGCTCTCT+GGG + chr1_2:50353471-50353490 Msa0075220:CDS 45.0%
!! GTGCTCTCTGGGATATCTTT+CGG + chr1_2:50353482-50353501 Msa0075220:CDS 45.0%
!! CCTGCTTTAAAGGAGAGCAA+TGG - chr1_2:50353570-50353589 None:intergenic 45.0%
!! CCATTGCTCTCCTTTAAAGC+AGG + chr1_2:50353567-50353586 Msa0075220:CDS 45.0%
AATTGTGTGTGTGTCCGACA+AGG - chr1_2:50353766-50353785 None:intergenic 45.0%
ACAGAGTTGTGGGTACATAC+TGG + chr1_2:50353805-50353824 Msa0075220:intron 45.0%
TGGTACTTACACACGAGTAC+CGG + chr1_2:50353904-50353923 Msa0075220:intron 45.0%
!! AGATACCAGCTCTGAAGCAT+GGG - chr1_2:50353957-50353976 None:intergenic 45.0%
!! AAGATACCAGCTCTGAAGCA+TGG - chr1_2:50353958-50353977 None:intergenic 45.0%
TTCAGAGCTGGTATCTTACC+TGG + chr1_2:50353961-50353980 Msa0075220:intron 45.0%
TCAGAGCTGGTATCTTACCT+GGG + chr1_2:50353962-50353981 Msa0075220:intron 45.0%
TACATGACAGTCTTTGGGTC+AGG + chr1_2:50354012-50354031 Msa0075220:intron 45.0%
ACATGACAGTCTTTGGGTCA+GGG + chr1_2:50354013-50354032 Msa0075220:intron 45.0%
AGTCTTTGGGTCAGGGATAT+TGG + chr1_2:50354020-50354039 Msa0075220:intron 45.0%
AGTCTCCCACCATAAGTTCA+GGG + chr1_2:50354070-50354089 Msa0075220:intron 45.0%
AAAGTTCACTCGACAGACGA+AGG + chr1_2:50354259-50354278 Msa0075220:intron 45.0%
AAGTTCACTCGACAGACGAA+GGG + chr1_2:50354260-50354279 Msa0075220:intron 45.0%
TAGATGGCTAGGAAGACTGA+TGG + chr1_2:50354294-50354313 Msa0075220:intron 45.0%
AAGAGGCTTAAGGAGGAGTA+TGG + chr1_2:50354423-50354442 Msa0075220:CDS 45.0%
GACTTGTAGGAATTGAACCC+TGG + chr1_2:50354536-50354555 Msa0075220:intron 45.0%
CAGCTTCTGAACAAAAGTCC+AGG - chr1_2:50354557-50354576 None:intergenic 45.0%
! CTGGACTTTTGTTCAGAAGC+TGG + chr1_2:50354555-50354574 Msa0075220:CDS 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG + chr1_2:50354580-50354599 Msa0075220:CDS 45.0%
!! TTCAGATTTCGGACTTGGTG+GGG - chr1_2:50354610-50354629 None:intergenic 45.0%
! CTTCAGATTTCGGACTTGGT+GGG - chr1_2:50354611-50354630 None:intergenic 45.0%
CTGATGGGAATCACAGTCTT+GGG - chr1_2:50354767-50354786 None:intergenic 45.0%
ACTGATGGGAATCACAGTCT+TGG - chr1_2:50354768-50354787 None:intergenic 45.0%
! CTTGGTGCATGACTGCAAAA+CGG - chr1_2:50355047-50355066 None:intergenic 45.0%
CAAGTCTGCAGAGGACAAAT+TGG + chr1_2:50355150-50355169 Msa0075220:CDS 45.0%
!!! GCTGTTTTAGAATCTGGGCT+TGG + chr1_2:50355297-50355316 Msa0075220:intron 45.0%
AGAATCTGGGCTTGGCTTAT+TGG + chr1_2:50355305-50355324 Msa0075220:intron 45.0%
GTGACTTAGTTAGCACCTTG+TGG - chr1_2:50355498-50355517 None:intergenic 45.0%
GCTTGATCTGGTCGAGAAAT+TGG + chr1_2:50355736-50355755 Msa0075220:CDS 45.0%
TGATCTGGTCGAGAAATTGG+AGG + chr1_2:50355739-50355758 Msa0075220:CDS 45.0%
TCGAGAAATTGGAGGAAGCA+AGG + chr1_2:50355747-50355766 Msa0075220:CDS 45.0%
TTACAGGTCTGGAGAAACCA+AGG + chr1_2:50355951-50355970 Msa0075220:intron 45.0%
GTAGTTAGGTGTGGTGATCT+TGG + chr1_2:50356039-50356058 Msa0075220:three_prime_UTR 45.0%
AGCTTCATCAGGAGCAGCTA+TGG - chr1_2:50348718-50348737 None:intergenic 50.0%
AACGGAGAAGGAAGCCGAAA+AGG + chr1_2:50348788-50348807 Msa0075220:CDS 50.0%
ACGGAGAAGGAAGCCGAAAA+GGG + chr1_2:50348789-50348808 Msa0075220:CDS 50.0%
AACTAATGTGGAGGAGGAGC+TGG + chr1_2:50348875-50348894 Msa0075220:CDS 50.0%
ACGTGGTAGGAAGAAGAAGG+TGG + chr1_2:50348920-50348939 Msa0075220:CDS 50.0%
AATCAATGCTGCTCAGGAGG+GGG + chr1_2:50348968-50348987 Msa0075220:CDS 50.0%
TTATCTTGTGTGGGGTCACG+AGG + chr1_2:50349340-50349359 Msa0075220:intron 50.0%
TATCTTGTGTGGGGTCACGA+GGG + chr1_2:50349341-50349360 Msa0075220:intron 50.0%
! TAGTTGCTCTGAGCCCAATG+GGG - chr1_2:50349382-50349401 None:intergenic 50.0%
! CTAGTTGCTCTGAGCCCAAT+GGG - chr1_2:50349383-50349402 None:intergenic 50.0%
! TCTAGTTGCTCTGAGCCCAA+TGG - chr1_2:50349384-50349403 None:intergenic 50.0%
AAGAACTTCCACTTGAGGGG+GGG - chr1_2:50349523-50349542 None:intergenic 50.0%
GCCATTGTCAAAGTCACCGT+TGG + chr1_2:50349576-50349595 Msa0075220:intron 50.0%
GTTCAGGTCATGGGTTCCAA+CGG - chr1_2:50349595-50349614 None:intergenic 50.0%
TCAGAGTCAGGGTTCGACAA+GGG - chr1_2:50349642-50349661 None:intergenic 50.0%
ATCAGAGTCAGGGTTCGACA+AGG - chr1_2:50349643-50349662 None:intergenic 50.0%
CCGACAATGGTATCAGAGTC+AGG - chr1_2:50349654-50349673 None:intergenic 50.0%
TACCATTGTCGGGTCATGAG+AGG + chr1_2:50349662-50349681 Msa0075220:intron 50.0%
! TGAGACTGGTTCAACAGCTG+AGG + chr1_2:50349870-50349889 Msa0075220:intron 50.0%
GGACTCACCTGCACTTATCA+AGG + chr1_2:50350109-50350128 Msa0075220:CDS 50.0%
ACTTGGAGAGCTCAACCTCA+TGG - chr1_2:50350249-50350268 None:intergenic 50.0%
GCAAGAAGTGAGACTCTTGG+AGG - chr1_2:50350364-50350383 None:intergenic 50.0%
! AAGAGCGTGTGTACTGGTAG+GGG + chr1_2:50350699-50350718 Msa0075220:intron 50.0%
CATGCAGATAATCACGCCCT+CGG - chr1_2:50350937-50350956 None:intergenic 50.0%
CCATTCACGAATCTCGGGTT+GGG - chr1_2:50351011-50351030 None:intergenic 50.0%
ACCATTCACGAATCTCGGGT+TGG - chr1_2:50351012-50351031 None:intergenic 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr1_2:50351363-50351382 Msa0075220:CDS 50.0%
AGACTAGATGGTCTGCTCTC+TGG + chr1_2:50351874-50351893 Msa0075220:intron 50.0%
GACTAGATGGTCTGCTCTCT+GGG + chr1_2:50351875-50351894 Msa0075220:intron 50.0%
CATGAAGAGTGACCAGCACA+AGG + chr1_2:50351899-50351918 Msa0075220:intron 50.0%
ATGAACTCGGCACAATGACG+GGG - chr1_2:50352452-50352471 None:intergenic 50.0%
AGCAGATCCATTGTCCTTCC+TGG + chr1_2:50353049-50353068 Msa0075220:intron 50.0%
AGACAAAGAACTGGCCAGGA+AGG - chr1_2:50353066-50353085 None:intergenic 50.0%
AGCACCTTGAGCAAGACAAG+AGG + chr1_2:50353254-50353273 Msa0075220:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG + chr1_2:50353255-50353274 Msa0075220:CDS 50.0%
CAAGACAAGAGGGAGCTACA+TGG + chr1_2:50353265-50353284 Msa0075220:CDS 50.0%
CTGGGATATCTTTCGGAGAG+AGG + chr1_2:50353489-50353508 Msa0075220:CDS 50.0%
TGTCGGTGCAACAGAGTTGT+GGG + chr1_2:50353795-50353814 Msa0075220:intron 50.0%
GGTACTTACACACGAGTACC+GGG + chr1_2:50353905-50353924 Msa0075220:intron 50.0%
!! TTACACACGAGTACCGGGTT+TGG + chr1_2:50353910-50353929 Msa0075220:intron 50.0%
!! TACACACGAGTACCGGGTTT+GGG + chr1_2:50353911-50353930 Msa0075220:intron 50.0%
GAGACTGAGTGAATGCAGGT+GGG - chr1_2:50354056-50354075 None:intergenic 50.0%
CAGTCTCCCACCATAAGTTC+AGG + chr1_2:50354069-50354088 Msa0075220:intron 50.0%
GTCTCCCACCATAAGTTCAG+GGG + chr1_2:50354071-50354090 Msa0075220:intron 50.0%
AAGGGCCTGCTGTATGTAGA+TGG + chr1_2:50354278-50354297 Msa0075220:intron 50.0%
CCTAGCCATCTACATACAGC+AGG - chr1_2:50354286-50354305 None:intergenic 50.0%
CCTGCTGTATGTAGATGGCT+AGG + chr1_2:50354283-50354302 Msa0075220:intron 50.0%
CCTTCAGATTTCGGACTTGG+TGG - chr1_2:50354612-50354631 None:intergenic 50.0%
CCACCAAGTCCGAAATCTGA+AGG + chr1_2:50354609-50354628 Msa0075220:CDS 50.0%
! CGTTTTGCAGTCATGCACCA+AGG + chr1_2:50355045-50355064 Msa0075220:intron 50.0%
CGAGTGCTTTCGTTTGACAG+AGG + chr1_2:50355102-50355121 Msa0075220:CDS 50.0%
GTCTGCAGAGGACAAATTGG+AGG + chr1_2:50355153-50355172 Msa0075220:CDS 50.0%
TTGAGTCGCGTAGTTAGGTG+TGG + chr1_2:50356030-50356049 Msa0075220:three_prime_UTR 50.0%
GTTATGTCTGGCACACCTTG+AGG + chr1_2:50356103-50356122 Msa0075220:three_prime_UTR 50.0%
ACGTTTCTTTGCCGGAGGAG+CGG - chr1_2:50348754-50348773 None:intergenic 55.0%
TGAGAAGGAGTGAGCGTGCT+AGG + chr1_2:50348820-50348839 Msa0075220:CDS 55.0%
GGGCAGGGTTGTGAAATGCA+CGG + chr1_2:50349209-50349228 Msa0075220:CDS 55.0%
ATCTTGTGTGGGGTCACGAG+GGG + chr1_2:50349342-50349361 Msa0075220:intron 55.0%
! AGTTGCTCTGAGCCCAATGG+GGG - chr1_2:50349381-50349400 None:intergenic 55.0%
GGGTTTAAGGGTCCTCTCAC+TGG + chr1_2:50349450-50349469 Msa0075220:intron 55.0%
CATTTATGCCCCCCCTCAAG+TGG + chr1_2:50349512-50349531 Msa0075220:intron 55.0%
GGGTTCGACAAGGGATCAAC+CGG - chr1_2:50349633-50349652 None:intergenic 55.0%
CTCCTCTCATGACCCGACAA+TGG - chr1_2:50349667-50349686 None:intergenic 55.0%
TCGGGTCATGAGAGGAGTCT+GGG + chr1_2:50349670-50349689 Msa0075220:intron 55.0%
AAGGTTGGGCACTCTGTGAG+AGG - chr1_2:50349785-50349804 None:intergenic 55.0%
! GACTGGTTCAACAGCTGAGG+AGG + chr1_2:50349873-50349892 Msa0075220:intron 55.0%
CACGAAGCTCGCAGCAACAA+AGG - chr1_2:50350865-50350884 None:intergenic 55.0%
CTTTGTTGCTGCGAGCTTCG+TGG + chr1_2:50350863-50350882 Msa0075220:CDS 55.0%
! CTTCGTGGTGGGAAGCTTCT+AGG + chr1_2:50350878-50350897 Msa0075220:CDS 55.0%
! CGAGGGCGTGATTATCTGCA+TGG + chr1_2:50350935-50350954 Msa0075220:CDS 55.0%
GGGCGTGATTATCTGCATGG+TGG + chr1_2:50350938-50350957 Msa0075220:CDS 55.0%
CCCAACCCGAGATTCGTGAA+TGG + chr1_2:50351008-50351027 Msa0075220:CDS 55.0%
! GGATGGCTTGCAGACAGTGA+TGG + chr1_2:50351040-50351059 Msa0075220:CDS 55.0%
GCTGGGAACCGTTTGTCATG+TGG + chr1_2:50351431-50351450 Msa0075220:CDS 55.0%
!! CTCGCCTGGACTGGCTTAAT+TGG + chr1_2:50352369-50352388 Msa0075220:CDS 55.0%
GAGGCCAATTAAGCCAGTCC+AGG - chr1_2:50352376-50352395 None:intergenic 55.0%
!! GGACTGGCTTAATTGGCCTC+AGG + chr1_2:50352376-50352395 Msa0075220:CDS 55.0%
! GATTTGCTCAGGAGCTTGGG+CGG + chr1_2:50352591-50352610 Msa0075220:CDS 55.0%
ATTTGCTCAGGAGCTTGGGC+GGG + chr1_2:50352592-50352611 Msa0075220:CDS 55.0%
GAACTGGCCAGGAAGGACAA+TGG - chr1_2:50353059-50353078 None:intergenic 55.0%
GCACAGACAAAGAACTGGCC+AGG - chr1_2:50353070-50353089 None:intergenic 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG - chr1_2:50353261-50353280 None:intergenic 55.0%
! GTGTCGGTGCAACAGAGTTG+TGG + chr1_2:50353794-50353813 Msa0075220:intron 55.0%
GGAGACTGAGTGAATGCAGG+TGG - chr1_2:50354057-50354076 None:intergenic 55.0%
GTGGGAGACTGAGTGAATGC+AGG - chr1_2:50354060-50354079 None:intergenic 55.0%
GCAGCCCCTGAACTTATGGT+GGG - chr1_2:50354078-50354097 None:intergenic 55.0%
AGCAGCCCCTGAACTTATGG+TGG - chr1_2:50354079-50354098 None:intergenic 55.0%
ACCATAAGTTCAGGGGCTGC+TGG + chr1_2:50354078-50354097 Msa0075220:intron 55.0%
ACCAGCAGCCCCTGAACTTA+TGG - chr1_2:50354082-50354101 None:intergenic 55.0%
GTTGTCTTCTTCCCCCGCCA+TGG - chr1_2:50348637-50348656 None:intergenic 60.0%
TGTTGATGCTGCCGCTCCTC+CGG + chr1_2:50348740-50348759 Msa0075220:CDS 60.0%
GCTCCTCCGGCAAAGAAACG+TGG + chr1_2:50348753-50348772 Msa0075220:CDS 60.0%
CTGCCACGTTTCTTTGCCGG+AGG - chr1_2:50348759-50348778 None:intergenic 60.0%
GTCGGGTCATGAGAGGAGTC+TGG + chr1_2:50349669-50349688 Msa0075220:intron 60.0%
CGGGTCATGAGAGGAGTCTG+GGG + chr1_2:50349671-50349690 Msa0075220:intron 60.0%
TGTTGCTGCGAGCTTCGTGG+TGG + chr1_2:50350866-50350885 Msa0075220:CDS 60.0%
GTTGCTGCGAGCTTCGTGGT+GGG + chr1_2:50350867-50350886 Msa0075220:CDS 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr1_2:50350881-50350900 Msa0075220:CDS 60.0%
TGGGTACACAAAGGCTCGCC+TGG + chr1_2:50352355-50352374 Msa0075220:CDS 60.0%
ACACAAAGGCTCGCCTGGAC+TGG + chr1_2:50352360-50352379 Msa0075220:CDS 60.0%
TTTGCTCAGGAGCTTGGGCG+GGG + chr1_2:50352593-50352612 Msa0075220:CDS 60.0%
GGAGTCCCATGCTTCAGAGC+TGG + chr1_2:50353949-50353968 Msa0075220:intron 60.0%
CTGAGCTGGAGATAGAGCCC+AGG - chr1_2:50353982-50354001 None:intergenic 60.0%
! ACTTGGTGGGGACAACCAGC+TGG - chr1_2:50354598-50354617 None:intergenic 60.0%
AGCCTTGGGACCACCCCCAT+TGG + chr1_2:50349365-50349384 Msa0075220:intron 65.0%
GCCTTGGGACCACCCCCATT+GGG + chr1_2:50349366-50349385 Msa0075220:intron 65.0%
! TGCTCTGAGCCCAATGGGGG+TGG - chr1_2:50349378-50349397 None:intergenic 65.0%
TGGGGTCACGAGGGGAGCCT+TGG + chr1_2:50349350-50349369 Msa0075220:intron 70.0%
GGGGTCACGAGGGGAGCCTT+GGG + chr1_2:50349351-50349370 Msa0075220:intron 70.0%
GCCCAATGGGGGTGGTCCCA+AGG - chr1_2:50349370-50349389 None:intergenic 70.0%
!! TCGGGTTGGGCAGCAGCACG+AGG - chr1_2:50350998-50351017 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 50348415 50356311 50348415 ID=Msa0075220;Name=Msa0075220
chr1_2 mRNA 50348415 50356311 50348415 ID=Msa0075220-mRNA-1;Parent=Msa0075220;Name=Msa0075220-mRNA-1;_AED=0.01;_eAED=0.01;_QI=221|0.41|0.38|1|1|1|13|327|891
chr1_2 exon 50348415 50349022 50348415 ID=Msa0075220-mRNA-1:exon:15469;Parent=Msa0075220-mRNA-1
chr1_2 exon 50349138 50349274 50349138 ID=Msa0075220-mRNA-1:exon:15470;Parent=Msa0075220-mRNA-1
chr1_2 exon 50350031 50350130 50350031 ID=Msa0075220-mRNA-1:exon:15471;Parent=Msa0075220-mRNA-1
chr1_2 exon 50350214 50350352 50350214 ID=Msa0075220-mRNA-1:exon:15472;Parent=Msa0075220-mRNA-1
chr1_2 exon 50350651 50350714 50350651 ID=Msa0075220-mRNA-1:exon:15473;Parent=Msa0075220-mRNA-1
chr1_2 exon 50350793 50351534 50350793 ID=Msa0075220-mRNA-1:exon:15474;Parent=Msa0075220-mRNA-1
chr1_2 exon 50352326 50352655 50352326 ID=Msa0075220-mRNA-1:exon:15475;Parent=Msa0075220-mRNA-1
chr1_2 exon 50353178 50353588 50353178 ID=Msa0075220-mRNA-1:exon:15476;Parent=Msa0075220-mRNA-1
chr1_2 exon 50354372 50354444 50354372 ID=Msa0075220-mRNA-1:exon:15477;Parent=Msa0075220-mRNA-1
chr1_2 exon 50354545 50354630 50354545 ID=Msa0075220-mRNA-1:exon:15478;Parent=Msa0075220-mRNA-1
chr1_2 exon 50355055 50355174 50355055 ID=Msa0075220-mRNA-1:exon:15479;Parent=Msa0075220-mRNA-1
chr1_2 exon 50355710 50355768 50355710 ID=Msa0075220-mRNA-1:exon:15480;Parent=Msa0075220-mRNA-1
chr1_2 exon 50355957 50356311 50355957 ID=Msa0075220-mRNA-1:exon:15481;Parent=Msa0075220-mRNA-1
chr1_2 five_prime_UTR 50348415 50348635 50348415 ID=Msa0075220-mRNA-1:five_prime_utr;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50348636 50349022 50348636 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50349138 50349274 50349138 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50350031 50350130 50350031 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50350214 50350352 50350214 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50350651 50350714 50350651 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50350793 50351534 50350793 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50352326 50352655 50352326 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50353178 50353588 50353178 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50354372 50354444 50354372 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50354545 50354630 50354545 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50355055 50355174 50355055 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50355710 50355768 50355710 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 CDS 50355957 50355984 50355957 ID=Msa0075220-mRNA-1:cds;Parent=Msa0075220-mRNA-1
chr1_2 three_prime_UTR 50355985 50356311 50355985 ID=Msa0075220-mRNA-1:three_prime_utr;Parent=Msa0075220-mRNA-1
Gene Sequence

>Msa0075220

ATGGCGGGGGAAGAAGACAACAACAACAACAACACAGTTGCTTTCACAGGGGAAGAATCCATTCCTGATAATCAAGAAACCATAGCTGCTCCTGATGAAGCTTCTGTTGATGCTGCCGCTCCTCCGGCAAAGAAACGTGGCAGAAAGAGAAAAACGGAGAAGGAAGCCGAAAAGGGCGAAAGTGTGAGAAGGAGTGAGCGTGCTAGGAAGAATAGTAGATCGTTGAATGAGGATTACTTAACTAATGTGGAGGAGGAGCTGGAACTGAAGAAGATTAAGGGGAAACGTGGTAGGAAGAAGAAGGTGGCAATTGGTGTCGGTGTTTCTGATGAAATCAATGCTGCTCAGGAGGGGGAGAAACCTGAATGCATTGAACAGCAACAGATGGGGATTGAAGATGTGTCCTTATTGGTCTGTAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTGAAATGCACGGAATGCAACCGGAAGAAATTTTGCATACCTTGTATTAACAGTTGGTATCCTGACTTGAAAGAGGAGGACATTGCCAAGAAATGTCCAGGATGCTGTGGTAATTGCAATTGCAAAGCATGCTTGGACTCACCTGCACTTATCAAGGCAATTAAAGAGAAGCCAGAAACCAACAATGACCATGAGGTTGAGCTCTCCAAGTATATGCTGAAAATACTTCTTCCGTATTTAAGACGATTGGATGAAGAACAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGGGATCTCACGTTCTGAGCTAAAAATAAAAGCCGCAGATATCCCTAAAAAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATGTGTCTCCTTTGTTGCTGCGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATCGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTGCATGGTGGAAATGATAATGAAGAGAGAGTAAATGAAAGTGAACCTCGTGCTGCTGCCCAACCCGAGATTCGTGAATGGTCAAGATCTGGATGGCTTGCAGACAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGATCATGGTTTCCTTGAACTGAGAAGCATACTTCCACAAAATTGCATCTCCGAGTTAGTATGTAAAGCAAAAGAACATGAAGAAACAATTAAGCTTCAAGTTGCTGTGGAGACTTCTGATAGTAGGTGTTCTTGTTTGAAGCCTGTTTTGAATGCATCTGACATACACAATAGCACAAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGAGAACTTCTTATACTGTCCCAGGGCAGTAAATCTACGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTATAATTGTCAGCAATGTACTTGAATGTACATCAGGTTTAAGCTGGGAACCGTTTGTCATGTGGCGTGCATTCCGTCAGATACGTAATACCAAGCAAAAAACACTTTTGGATGTGAAAACTATTGATTGCTTGGATTGGTGTGAGGGAGATCTTAATTTGCACCAATTCTTTACTGGGTACACAAAGGCTCGCCTGGACTGGCTTAATTGGCCTCAGGTTTTGAAACTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCCCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTTCAAAGAATATACAGATCCTTTCAATGGTGTTCTAAACCTTGCTGTGAAGTTGCCTAAAGATGTTTTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCAGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAGCTGGATTCTAAGGGCATTAATGCCATTAAAAAACTGACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGGGACGGAGAGCCCAAGATTGACATGCTTGATAATTCATCTTCTTCCATAAAGGCTTCATACGAGCAAAATAGTGTTCGATTTGTGGAAAATGGAAGTGGAATATGTGATGAAAAGGTGGTTGATCCAGAGCTCAAAGAAGTTGATAAAGAAAATAGTTTATTGGTTGGGGGAAATTCTTTAGACGGTGCTCTCTGGGATATCTTTCGGAGAGAGGATGTACCTAAATTGGAAGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTGTTCACCCCATCCATGATCAGACGTTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTTGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGCGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAAATCACAAGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATGTATGCTATGCTTGATCTGGTCGAGAAATTGGAGGAAGCAAGGTCTGGAGAAACCAAGGTTCCTATGTAA
Protein sequence

>Msa0075220

MAGEEDNNNNNTVAFTGEESIPDNQETIAAPDEASVDAAAPPAKKRGRKRKTEKEAEKGESVRRSERARKNSRSLNEDYLTNVEEELELKKIKGKRGRKKKVAIGVGVSDEINAAQEGEKPECIEQQQMGIEDVSLLVCNKDTNCHQCKRNDKGRVVKCTECNRKKFCIPCINSWYPDLKEEDIAKKCPGCCGNCNCKACLDSPALIKAIKEKPETNNDHEVELSKYMLKILLPYLRRLDEEQMAEKEIEAKRQGISRSELKIKAADIPKKERVYCDNCKTSIFDYHRSCTKCSFDMCLLCCCELRGGKLLGGADPIEFEFIFRGRDYLHGGNDNEERVNESEPRAAAQPEIREWSRSGWLADSDGSIPCPKADDDCDHGFLELRSILPQNCISELVCKAKEHEETIKLQVAVETSDSRCSCLKPVLNASDIHNSTRKAASREDSSENFLYCPRAVNLRHEDLRHFQWHWSKGEPIIVSNVLECTSGLSWEPFVMWRAFRQIRNTKQKTLLDVKTIDCLDWCEGDLNLHQFFTGYTKARLDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFNGVLNLAVKLPKDVLQPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSKGINAIKKLTQKHLEQDKRELHGDNRDGEPKIDMLDNSSSSIKASYEQNSVRFVENGSGICDEKVVDPELKEVDKENSLLVGGNSLDGALWDIFRREDVPKLEEYLKKHFREFRHVHCSPLKQVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENIGECFRLTEEFRKLPVNHKSAEDKLEVKKMIMYAMLDLVEKLEEARSGETKVPM*