AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0397350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0397350 MtrunA17_Chr3g0084731 78.972 214 45 0 117 330 763 976 6.60e-114 353
Msa0397350 MtrunA17_Chr3g0084731 62.500 120 17 1 12 103 229 348 1.20e-35 137
Msa0397350 MtrunA17_Chr3g0084721 77.674 215 47 1 117 330 765 979 1.28e-112 350
Msa0397350 MtrunA17_Chr3g0084721 66.667 120 12 1 12 103 231 350 7.37e-41 152
Msa0397350 MtrunA17_Chr3g0084851 57.895 209 83 1 117 325 765 968 1.17e-75 251
Msa0397350 MtrunA17_Chr3g0084851 65.649 131 16 2 1 103 221 350 2.60e-35 136
Msa0397350 MtrunA17_Chr3g0084841 54.378 217 91 2 117 330 766 977 7.68e-69 232
Msa0397350 MtrunA17_Chr3g0084841 68.702 131 13 1 1 103 221 351 5.42e-40 150
Msa0397350 MtrunA17_Chr3g0084741 52.153 209 87 2 117 325 8 203 9.55e-65 204
Msa0397350 MtrunA17_Chr2g0299881 39.806 206 117 1 117 322 767 965 1.31e-38 145
Msa0397350 MtrunA17_Chr2g0299881 55.303 132 30 2 1 103 219 350 1.35e-33 131
Msa0397350 MtrunA17_Chr3g0084771 64.122 131 19 1 1 103 217 347 1.11e-37 139
Msa0397350 MtrunA17_Chr2g0299791 38.647 207 120 1 116 322 762 961 3.19e-36 139
Msa0397350 MtrunA17_Chr2g0299791 56.061 132 29 2 1 103 215 346 3.98e-35 135
Msa0397350 MtrunA17_Chr2g0299841 40.284 211 123 1 112 322 799 1006 3.71e-36 139
Msa0397350 MtrunA17_Chr2g0299841 54.545 132 31 2 1 103 256 387 7.88e-35 134
Msa0397350 MtrunA17_Chr2g0299921 38.679 212 118 3 112 322 756 956 5.71e-34 132
Msa0397350 MtrunA17_Chr2g0299921 50.833 120 31 2 12 103 225 344 1.05e-27 114
Msa0397350 MtrunA17_Chr2g0299811 54.545 132 31 2 1 103 62 193 6.48e-34 132
Msa0397350 MtrunA17_Chr2g0299811 36.364 198 116 2 116 313 609 796 1.74e-29 119
Msa0397350 MtrunA17_Chr2g0299851 39.336 211 118 3 112 322 757 957 8.51e-34 132
Msa0397350 MtrunA17_Chr2g0299851 50.833 120 31 2 12 103 226 345 1.15e-27 114
Msa0397350 MtrunA17_Chr6g0479641 48.855 131 40 1 1 104 221 351 5.19e-32 126
Msa0397350 MtrunA17_Chr5g0417081 47.328 131 41 1 1 103 1 131 8.42e-30 117
Msa0397350 MtrunA17_Chr6g0484161 45.802 131 44 1 1 104 244 374 1.22e-29 119
Msa0397350 MtrunA17_Chr8g0368251 50.000 126 36 1 1 99 220 345 1.76e-29 119
Msa0397350 MtrunA17_Chr6g0480451 48.092 131 41 1 1 104 285 415 4.16e-29 118
Msa0397350 MtrunA17_Chr6g0480151 48.855 131 40 2 1 104 220 350 5.04e-29 117
Msa0397350 MtrunA17_Chr6g0479591 46.565 131 43 1 1 104 246 376 1.41e-28 116
Msa0397350 MtrunA17_Chr1g0146421 46.825 126 40 1 1 99 220 345 2.92e-28 115
Msa0397350 MtrunA17_Chr6g0478841 48.092 131 41 3 1 104 210 340 4.82e-28 115
Msa0397350 MtrunA17_Chr6g0481141 48.819 127 36 2 1 99 271 396 7.98e-28 114
Msa0397350 MtrunA17_Chr6g0479051 46.565 131 43 2 1 104 189 319 8.79e-28 114
Msa0397350 MtrunA17_Chr6g0478741 45.802 131 44 2 1 104 210 340 1.10e-27 114
Msa0397350 MtrunA17_Chr6g0480321 48.031 127 37 2 1 99 78 203 1.14e-27 114
Msa0397350 MtrunA17_Chr6g0479731 46.212 132 42 2 1 104 218 348 1.34e-27 113
Msa0397350 MtrunA17_Chr6g0479621 47.328 131 42 3 1 104 222 352 1.62e-27 113
Msa0397350 MtrunA17_Chr6g0481251 45.238 126 42 1 1 99 77 202 1.84e-27 113
Msa0397350 MtrunA17_Chr6g0480421 45.802 131 44 1 1 104 78 208 2.07e-27 113
Msa0397350 MtrunA17_Chr6g0479631 46.565 131 43 2 1 104 220 350 2.40e-27 113
Msa0397350 MtrunA17_Chr6g0480271 46.212 132 42 2 1 104 221 351 6.36e-27 111
Msa0397350 MtrunA17_Chr6g0480041 43.511 131 47 1 1 104 220 350 6.98e-27 111
Msa0397350 MtrunA17_Chr6g0480311 43.939 132 45 2 1 104 208 338 1.05e-26 111
Msa0397350 MtrunA17_Chr6g0480091 44.275 131 46 2 1 104 220 350 1.20e-26 109
Msa0397350 MtrunA17_Chr6g0481001 44.275 131 44 2 1 103 224 353 1.40e-26 110
Msa0397350 MtrunA17_Chr6g0480981 45.038 131 43 2 1 103 79 208 2.41e-26 109
Msa0397350 MtrunA17_Chr6g0480181 45.455 132 43 2 1 104 213 343 8.22e-26 108
Msa0397350 MtrunA17_Chr4g0025741 46.457 127 39 2 1 99 220 345 1.49e-25 107
Msa0397350 MtrunA17_Chr4g0025811 45.669 127 40 2 1 99 220 345 1.91e-25 107
Msa0397350 MtrunA17_Chr4g0025831 45.669 127 40 2 1 99 220 345 1.92e-25 107
Msa0397350 MtrunA17_Chr6g0479761 45.385 130 44 2 1 103 77 206 2.01e-25 107
Msa0397350 MtrunA17_Chr6g0478771 45.038 131 45 3 1 104 210 340 2.20e-25 107
Msa0397350 MtrunA17_Chr6g0479651 41.538 130 49 1 1 103 224 353 2.32e-25 107
Msa0397350 MtrunA17_Chr4g0025751 45.669 127 40 2 1 99 220 345 2.92e-25 106
Msa0397350 MtrunA17_Chr6g0482511 43.511 131 45 2 1 103 235 364 3.11e-25 106
Msa0397350 MtrunA17_Chr6g0481221 44.094 127 42 2 1 99 220 345 4.47e-25 105
Msa0397350 MtrunA17_Chr6g0478451 42.308 130 48 1 1 103 223 352 8.46e-25 105
Msa0397350 MtrunA17_Chr5g0417071 50.485 103 38 1 1 103 1 90 9.63e-25 104
Msa0397350 MtrunA17_Chr6g0479001 47.581 124 38 3 1 97 210 333 1.38e-24 104
Msa0397350 MtrunA17_Chr6g0481011 42.748 131 46 2 1 103 227 356 1.66e-24 104
Msa0397350 MtrunA17_Chr6g0480911 40.769 130 50 1 1 103 222 351 2.05e-24 104
Msa0397350 MtrunA17_Chr8g0353371 41.176 136 47 2 1 103 223 358 3.05e-24 103
Msa0397350 MtrunA17_Chr6g0479821 42.308 130 48 1 1 103 223 352 3.72e-24 103
Msa0397350 MtrunA17_Chr6g0481331 40.146 137 54 2 1 109 263 399 5.30e-24 103
Msa0397350 MtrunA17_Chr4g0025701 44.094 127 42 2 1 99 220 345 6.84e-24 102
Msa0397350 MtrunA17_Chr3g0081531 47.934 121 34 2 12 103 218 338 1.51e-23 102
Msa0397350 MtrunA17_Chr8g0354701 41.985 131 47 2 1 103 214 343 1.61e-23 101
Msa0397350 MtrunA17_Chr6g0480461 35.556 180 39 2 1 103 221 400 3.51e-23 100
Msa0397350 MtrunA17_Chr8g0379341 47.200 125 38 2 7 103 26 150 3.96e-23 94.0
Msa0397350 MtrunA17_Chr6g0480521 43.651 126 44 2 1 99 221 346 6.27e-23 99.8
Msa0397350 MtrunA17_Chr3g0084151 39.231 130 52 1 1 103 214 343 9.81e-23 99.4
Msa0397350 MtrunA17_Chr6g0482191 43.609 133 44 3 1 103 85 216 1.36e-22 98.6
Msa0397350 MtrunA17_Chr2g0300251 41.538 130 49 1 1 103 222 351 1.45e-22 99.0
Msa0397350 MtrunA17_Chr4g0006771 41.985 131 48 3 1 103 225 355 1.58e-22 98.6
Msa0397350 MtrunA17_Chr6g0480051 40.769 130 50 1 1 103 1 130 2.64e-22 97.8
Msa0397350 MtrunA17_Chr6g0482441 40.769 130 50 1 1 103 206 335 9.62e-22 96.7
Msa0397350 MtrunA17_Chr8g0371711 44.167 120 39 2 12 103 230 349 1.31e-21 95.9
Msa0397350 MtrunA17_Chr6g0474801 40.945 127 47 2 1 99 220 346 7.70e-21 93.6
Msa0397350 MtrunA17_Chr6g0479671 44.615 130 45 1 1 103 220 349 2.25e-20 92.4
Msa0397350 MtrunA17_Chr1g0172541 40.769 130 50 1 1 103 206 335 2.95e-20 92.0
Msa0397350 MtrunA17_Chr6g0482161 41.667 120 42 2 12 103 225 344 3.46e-20 91.3
Msa0397350 MtrunA17_Chr8g0354711 41.985 131 48 1 1 103 208 338 1.15e-18 87.4
Msa0397350 MtrunA17_Chr6g0482111 46.923 130 42 2 1 103 218 347 2.45e-18 86.3
Msa0397350 MtrunA17_Chr5g0417031 58.730 63 26 0 1 63 1 63 5.23e-18 78.2
Msa0397350 MtrunA17_Chr4g0009171 37.594 133 54 3 1 104 932 1064 2.85e-17 83.2
Msa0397350 MtrunA17_Chr4g0009171 34.586 133 58 3 1 104 206 338 1.10e-13 72.4
Msa0397350 MtrunA17_Chr6g0480381 38.655 119 46 1 12 103 238 356 5.35e-17 81.6
Msa0397350 MtrunA17_Chr4g0009341 38.636 132 52 3 1 103 111 242 6.32e-17 81.3
Msa0397350 MtrunA17_Chr6g0482141 41.985 131 48 2 1 103 219 349 6.66e-17 82.0
Msa0397350 MtrunA17_Chr6g0474761 37.500 120 47 2 12 103 231 350 8.21e-17 81.3
Msa0397350 MtrunA17_Chr6g0454901 34.848 132 57 2 1 103 20 151 1.27e-16 80.5
Msa0397350 MtrunA17_Chr4g0009351 36.842 133 55 3 1 104 121 253 1.91e-16 79.7
Msa0397350 MtrunA17_Chr4g0005391 36.585 123 49 2 1 95 258 379 2.99e-16 80.1
Msa0397350 MtrunA17_Chr6g0454931 37.594 133 53 2 1 103 275 407 3.35e-16 79.7
Msa0397350 MtrunA17_Chr4g0009041 36.842 133 55 3 1 104 714 846 6.57e-16 79.0
Msa0397350 MtrunA17_Chr4g0009041 39.815 108 60 2 1 103 234 341 1.25e-12 68.9
Msa0397350 MtrunA17_Chr4g0041611 25.362 276 150 6 1 248 219 466 1.00e-15 78.6
Msa0397350 MtrunA17_Chr4g0009101 35.338 133 57 3 1 104 744 876 1.14e-15 78.2
Msa0397350 MtrunA17_Chr6g0454821 37.121 132 53 4 1 103 250 380 2.98e-15 77.0
Msa0397350 MtrunA17_Chr6g0455211 34.848 132 57 2 1 103 253 384 3.62e-15 76.6
Msa0397350 MtrunA17_Chr4g0005851 34.848 132 57 3 1 103 238 369 5.45e-15 76.3
Msa0397350 MtrunA17_Chr4g0009401 36.000 125 51 3 1 96 704 828 1.30e-14 75.1
Msa0397350 MtrunA17_Chr4g0009301 35.338 133 57 3 1 104 746 878 1.32e-14 75.1
Msa0397350 MtrunA17_Chr7g0248121 39.496 119 45 2 12 103 229 347 1.36e-14 75.1
Msa0397350 MtrunA17_Chr4g0005591 34.848 132 57 2 1 103 278 409 1.97e-14 74.3
Msa0397350 MtrunA17_Chr6g0451551 41.985 131 48 3 1 103 362 492 3.27e-14 73.9
Msa0397350 MtrunA17_Chr4g0005891 34.328 134 55 3 1 103 249 380 3.61e-14 73.6
Msa0397350 MtrunA17_Chr5g0415821 45.133 113 33 2 1 85 43 154 3.89e-14 69.3
Msa0397350 MtrunA17_Chr8g0363851 32.090 134 60 3 1 103 30 163 4.71e-14 73.2
Msa0397350 MtrunA17_Chr8g0354721 35.537 121 49 2 12 103 222 342 4.73e-14 73.6
Msa0397350 MtrunA17_Chr8g0351551 30.534 131 63 2 1 103 215 345 7.95e-14 72.8
Msa0397350 MtrunA17_Chr4g0009241 35.878 131 56 4 1 103 246 376 8.62e-14 72.8
Msa0397350 MtrunA17_Chr7g0256881 33.582 134 60 3 3 108 212 344 1.62e-13 71.6
Msa0397350 MtrunA17_Chr3g0077971 34.167 120 51 2 12 103 217 336 2.33e-13 71.2
Msa0397350 MtrunA17_Chr7g0248511 36.975 119 48 2 12 103 235 353 3.56e-13 70.5
Msa0397350 MtrunA17_Chr8g0350801 35.000 120 50 1 12 103 224 343 3.60e-13 70.5
Msa0397350 MtrunA17_Chr6g0482491 36.667 120 48 2 12 103 213 332 4.24e-13 70.5
Msa0397350 MtrunA17_Chr4g0014831 36.800 125 51 3 7 103 1 125 5.36e-13 69.7
Msa0397350 MtrunA17_Chr8g0354681 36.585 123 50 2 9 103 225 347 7.78e-13 69.7
Msa0397350 MtrunA17_Chr7g0255681 33.333 132 59 2 1 103 1216 1347 1.04e-12 69.3
Msa0397350 MtrunA17_Chr7g0255681 33.333 132 59 2 1 103 213 344 1.58e-12 68.9
Msa0397350 MtrunA17_Chr7g0255681 34.091 132 58 2 1 103 714 845 1.80e-12 68.6
Msa0397350 MtrunA17_Chr7g0234891 35.338 133 55 3 1 103 129 260 1.23e-12 68.2
Msa0397350 MtrunA17_Chr4g0010711 34.091 132 58 2 1 103 719 850 1.63e-12 68.6
Msa0397350 MtrunA17_Chr6g0482471 36.667 120 47 3 12 103 224 342 1.72e-12 68.6
Msa0397350 MtrunA17_Chr5g0442761 35.484 124 48 4 12 103 224 347 4.68e-12 67.4
Msa0397350 MtrunA17_Chr6g0455551 35.537 121 49 2 12 103 296 416 5.51e-12 67.0
Msa0397350 MtrunA17_Chr4g0009261 41.346 104 52 3 9 103 3 106 8.00e-12 64.3
Msa0397350 MtrunA17_Chr2g0330121 33.036 112 47 1 12 95 44 155 8.82e-12 66.2
Msa0397350 MtrunA17_Chr7g0248521 34.454 119 51 2 12 103 228 346 9.64e-12 66.2
Msa0397350 MtrunA17_Chr6g0482351 39.695 131 50 3 1 103 213 342 1.41e-11 65.9
Msa0397350 MtrunA17_Chr6g0482321 33.333 120 52 1 12 103 222 341 1.48e-11 65.9
Msa0397350 MtrunA17_Chr6g0481191 81.818 33 6 0 67 99 3 35 2.01e-11 64.7
Msa0397350 MtrunA17_Chr6g0480971 54.167 48 22 0 1 48 212 259 9.86e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0397350 AT5G17680.1 33.588 131 59 1 1 103 208 338 1.22e-17 84.7
Msa0397350 AT5G17680.2 33.588 131 59 1 1 103 209 339 1.23e-17 84.7
Msa0397350 AT1G27170.2 35.115 131 57 3 1 103 213 343 1.18e-15 78.6
Msa0397350 AT1G31540.2 36.957 138 52 3 1 103 206 343 1.33e-15 78.6
Msa0397350 AT1G27170.1 35.115 131 57 3 1 103 213 343 1.38e-15 78.6
Msa0397350 AT1G31540.3 36.957 138 52 3 1 103 206 343 1.54e-15 78.2
Msa0397350 AT1G31540.1 36.957 138 52 3 1 103 206 343 1.54e-15 78.2
Msa0397350 AT5G18360.1 36.090 133 55 3 1 103 209 341 1.61e-15 78.2
Msa0397350 AT5G38350.1 32.593 135 59 2 1 103 48 182 1.63e-15 78.2
Msa0397350 AT5G46450.1 35.556 135 55 3 1 103 209 343 2.62e-15 77.4
Msa0397350 AT5G46450.3 35.556 135 55 3 1 103 209 343 3.15e-15 77.4
Msa0397350 AT1G66090.1 34.848 132 57 4 1 103 222 353 7.07e-15 75.5
Msa0397350 AT5G58120.1 35.338 133 55 3 1 103 212 343 1.13e-14 75.5
Msa0397350 AT5G41750.1 35.115 131 57 3 1 103 209 339 1.35e-14 75.5
Msa0397350 AT5G41750.2 35.115 131 57 3 1 103 209 339 1.35e-14 75.5
Msa0397350 AT1G63870.1 34.375 128 59 3 1 103 213 340 1.45e-14 75.1
Msa0397350 AT5G41540.1 35.714 126 51 4 1 96 207 332 1.48e-14 75.1
Msa0397350 AT1G64070.1 36.296 135 51 4 1 103 210 341 1.94e-14 74.7
Msa0397350 AT4G16920.9 38.168 131 51 4 1 103 205 333 2.75e-14 74.3
Msa0397350 AT4G16920.3 38.168 131 51 4 1 103 205 333 2.96e-14 74.3
Msa0397350 AT4G16920.5 38.168 131 51 4 1 103 205 333 2.96e-14 74.3
Msa0397350 AT4G16920.6 38.168 131 51 4 1 103 205 333 2.99e-14 74.3
Msa0397350 AT4G16920.1 38.168 131 51 4 1 103 205 333 3.02e-14 74.3
Msa0397350 AT4G16920.4 38.168 131 51 4 1 103 205 333 3.14e-14 74.3
Msa0397350 AT4G16920.7 38.168 131 51 4 1 103 205 333 3.14e-14 74.3
Msa0397350 AT4G16920.2 38.168 131 51 4 1 103 205 333 3.16e-14 74.3
Msa0397350 AT4G16920.8 38.168 131 51 4 1 103 205 333 3.16e-14 74.3
Msa0397350 AT5G41550.1 34.328 134 57 3 1 103 209 342 3.17e-14 74.3
Msa0397350 AT4G16860.2 38.168 131 51 4 1 103 47 175 3.57e-14 73.9
Msa0397350 AT1G17600.1 37.121 132 54 4 1 103 207 338 3.77e-14 73.9
Msa0397350 AT4G16860.1 38.168 131 51 4 1 103 209 337 3.78e-14 73.9
Msa0397350 AT4G16960.1 36.641 131 53 4 1 103 211 339 6.84e-14 73.2
Msa0397350 AT4G16940.1 36.641 131 53 4 1 103 167 295 7.41e-14 73.2
Msa0397350 AT4G16940.4 36.641 131 53 4 1 103 167 295 7.43e-14 73.2
Msa0397350 AT4G16940.6 36.641 131 53 4 1 103 167 295 7.47e-14 73.2
Msa0397350 AT4G16940.2 36.641 131 53 4 1 103 167 295 7.48e-14 73.2
Msa0397350 AT4G16940.3 36.641 131 53 4 1 103 167 295 7.48e-14 73.2
Msa0397350 AT4G16940.5 36.641 131 53 4 1 103 167 295 7.48e-14 73.2
Msa0397350 AT4G16890.5 36.641 131 53 4 1 103 207 335 9.31e-14 72.8
Msa0397350 AT4G16890.3 36.641 131 53 4 1 103 207 335 9.74e-14 72.8
Msa0397350 AT4G16890.1 36.641 131 53 4 1 103 216 344 1.02e-13 72.8
Msa0397350 AT5G40910.6 35.433 127 57 3 1 103 24 149 1.04e-13 72.8
Msa0397350 AT5G40910.4 35.433 127 57 3 1 103 24 149 1.04e-13 72.8
Msa0397350 AT4G16890.2 36.641 131 53 4 1 103 216 344 1.05e-13 72.8
Msa0397350 AT5G40910.1 35.433 127 57 3 1 103 208 333 1.13e-13 72.4
Msa0397350 AT5G40910.9 35.433 127 57 3 1 103 208 333 1.13e-13 72.4
Msa0397350 AT4G16890.4 36.641 131 53 4 1 103 61 189 1.17e-13 72.4
Msa0397350 AT5G40910.2 35.433 127 57 3 1 103 24 149 1.26e-13 72.4
Msa0397350 AT5G40910.3 35.433 127 57 3 1 103 24 149 1.26e-13 72.4
Msa0397350 AT5G40910.5 35.433 127 57 3 1 103 24 149 1.26e-13 72.4
Msa0397350 AT5G40910.7 35.433 127 57 3 1 103 24 149 1.26e-13 72.4
Msa0397350 AT5G40910.8 35.433 127 57 3 1 103 24 149 1.26e-13 72.4
Msa0397350 AT5G40060.1 35.507 138 54 3 1 103 14 151 1.34e-13 72.4
Msa0397350 AT5G40060.2 35.507 138 54 3 1 103 14 151 1.46e-13 72.0
Msa0397350 AT5G38850.1 34.091 132 57 3 1 103 201 331 1.67e-13 72.0
Msa0397350 AT4G16950.1 37.405 131 52 4 1 103 211 339 1.86e-13 72.0
Msa0397350 AT4G16950.3 37.405 131 52 4 1 103 211 339 1.89e-13 72.0
Msa0397350 AT4G16950.4 37.405 131 52 4 1 103 211 339 1.91e-13 72.0
Msa0397350 AT4G16950.2 37.405 131 52 4 1 103 211 339 2.10e-13 71.6
Msa0397350 AT4G16950.5 37.405 131 52 4 1 103 211 339 2.10e-13 71.6
Msa0397350 AT4G16950.6 37.405 131 52 4 1 103 211 339 2.13e-13 71.6
Msa0397350 AT5G46490.1 33.113 151 66 4 1 116 205 355 2.16e-13 70.9
Msa0397350 AT5G11250.3 33.582 134 58 3 1 103 177 310 5.22e-13 70.5
Msa0397350 AT5G11250.1 33.582 134 58 3 1 103 177 310 5.22e-13 70.5
Msa0397350 AT5G46490.2 34.783 138 55 4 1 103 205 342 5.41e-13 70.5
Msa0397350 AT5G18350.1 35.862 145 51 5 1 103 216 360 5.61e-13 70.5
Msa0397350 AT5G11250.2 33.582 134 58 3 1 103 259 392 5.66e-13 70.5
Msa0397350 AT5G44510.3 33.083 133 59 3 1 103 236 368 5.94e-13 70.5
Msa0397350 AT5G44510.1 33.083 133 59 3 1 103 236 368 5.97e-13 70.5
Msa0397350 AT5G46490.3 34.783 138 55 4 1 103 262 399 6.08e-13 70.1
Msa0397350 AT5G44510.4 33.083 133 59 3 1 103 236 368 6.24e-13 70.5
Msa0397350 AT5G46490.7 34.783 138 55 4 1 103 245 382 6.32e-13 70.1
Msa0397350 AT5G46490.5 34.783 138 55 4 1 103 245 382 6.32e-13 70.1
Msa0397350 AT5G44510.2 33.083 133 59 3 1 103 236 368 6.82e-13 70.1
Msa0397350 AT5G46490.4 34.783 138 55 4 1 103 262 399 7.26e-13 69.7
Msa0397350 AT5G46490.8 34.783 138 55 4 1 103 205 342 7.59e-13 69.7
Msa0397350 AT4G19500.1 35.156 128 58 2 1 103 206 333 7.85e-13 70.1
Msa0397350 AT5G46490.6 34.783 138 55 4 1 103 245 382 7.85e-13 69.7
Msa0397350 AT5G38340.2 32.593 135 59 3 1 103 48 182 1.09e-12 69.3
Msa0397350 AT5G38340.3 32.593 135 59 3 1 103 254 388 1.14e-12 69.3
Msa0397350 AT5G38340.1 32.593 135 59 3 1 103 254 388 1.14e-12 69.3
Msa0397350 AT5G51630.1 35.938 128 57 3 1 103 208 335 1.27e-12 69.3
Msa0397350 AT3G04220.3 30.075 133 62 2 2 103 261 393 1.37e-12 69.3
Msa0397350 AT1G65850.1 30.882 136 61 3 1 103 230 365 1.47e-12 69.3
Msa0397350 AT1G65850.2 30.882 136 61 3 1 103 245 380 1.50e-12 68.9
Msa0397350 AT5G51630.2 35.938 128 57 3 1 103 144 271 1.55e-12 68.9
Msa0397350 AT5G51630.4 35.938 128 57 3 1 103 144 271 1.57e-12 68.9
Msa0397350 AT5G51630.6 35.938 128 57 3 1 103 144 271 1.57e-12 68.9
Msa0397350 AT5G41740.1 34.848 132 57 5 1 103 199 330 1.60e-12 68.9
Msa0397350 AT3G04220.1 30.075 133 62 2 2 103 261 393 1.64e-12 68.9
Msa0397350 AT5G41740.3 34.848 132 57 5 1 103 47 178 1.64e-12 68.9
Msa0397350 AT5G41740.2 34.848 132 57 5 1 103 199 330 1.65e-12 68.9
Msa0397350 AT1G65850.3 30.882 136 61 3 1 103 120 255 1.75e-12 68.9
Msa0397350 AT2G16870.1 35.338 133 56 5 1 103 208 340 1.84e-12 68.9
Msa0397350 AT5G51630.5 35.938 128 57 3 1 103 144 271 2.00e-12 68.6
Msa0397350 AT3G04220.2 30.075 133 62 2 2 103 261 393 2.36e-12 68.2
Msa0397350 AT1G63740.2 30.147 136 64 3 1 106 239 373 2.78e-12 68.2
Msa0397350 AT1G63740.1 30.147 136 64 3 1 106 168 302 2.78e-12 68.2
Msa0397350 AT3G04210.2 32.331 133 60 3 1 103 263 395 3.08e-12 67.8
Msa0397350 AT3G04210.1 32.331 133 60 3 1 103 263 395 3.08e-12 67.8
Msa0397350 AT2G17050.2 34.483 116 62 1 2 103 49 164 3.96e-12 67.8
Msa0397350 AT2G17050.3 34.483 116 62 1 2 103 49 164 4.37e-12 67.8
Msa0397350 AT5G46260.1 34.783 138 55 4 1 103 205 342 4.38e-12 67.8
Msa0397350 AT5G46270.2 36.232 138 53 4 1 103 205 342 4.44e-12 67.8
Msa0397350 AT5G46270.4 36.232 138 53 4 1 103 216 353 4.49e-12 67.8
Msa0397350 AT5G49140.1 32.593 135 59 3 1 103 209 343 4.52e-12 67.8
Msa0397350 AT2G17050.1 34.483 116 62 1 2 103 49 164 4.56e-12 67.8
Msa0397350 AT5G46270.1 36.232 138 53 4 1 103 216 353 4.56e-12 67.8
Msa0397350 AT5G46270.5 36.232 138 53 4 1 103 216 353 4.56e-12 67.8
Msa0397350 AT5G46270.3 36.232 138 53 4 1 103 205 342 4.72e-12 67.8
Msa0397350 AT5G18370.1 33.562 146 54 4 1 103 257 402 5.29e-12 67.4
Msa0397350 AT1G72840.4 36.667 120 45 3 12 103 59 175 1.00e-11 66.6
Msa0397350 AT1G72840.2 36.667 120 45 3 12 103 225 341 1.06e-11 66.6
Msa0397350 AT1G72840.3 36.667 120 45 3 12 103 225 341 1.06e-11 66.6
Msa0397350 AT1G72840.1 36.667 120 45 3 12 103 225 341 1.22e-11 66.2
Msa0397350 AT1G27180.1 32.576 132 60 4 1 103 386 517 3.24e-11 65.1
Msa0397350 AT1G27180.5 32.576 132 60 4 1 103 222 353 3.44e-11 65.1
Msa0397350 AT1G27180.8 32.576 132 60 4 1 103 222 353 3.44e-11 65.1
Msa0397350 AT1G27180.3 32.576 132 60 4 1 103 224 355 3.49e-11 65.1
Msa0397350 AT1G27180.2 32.576 132 60 4 1 103 224 355 3.70e-11 65.1
Msa0397350 AT1G27180.7 32.576 132 60 4 1 103 48 179 3.78e-11 64.7
Msa0397350 AT1G27180.6 32.576 132 60 4 1 103 48 179 3.78e-11 64.7
Msa0397350 AT1G27180.4 32.576 132 60 4 1 103 48 179 3.78e-11 64.7
Msa0397350 AT1G72940.1 37.069 116 60 2 1 103 209 324 6.07e-11 63.5

Find 68 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAACATGGTTGGCATTTA+TGG 0.075271 3_2:-16709204 None:intergenic
ATGGCATTTGCAGACTCTTT+TGG 0.259829 3_2:+16708584 None:intergenic
TCATGGTCTCCCCTTGGCTT+TGG 0.276989 3_2:-16708688 Msa0397350:CDS
TTTCACACAGTAGTGTTTCT+TGG 0.299764 3_2:+16709055 None:intergenic
CATTAAGAGAATACACATTA+AGG 0.313072 3_2:+16708531 None:intergenic
GTAGATCACAACAAAACTTT+TGG 0.315653 3_2:+16708189 None:intergenic
GATATTACTATCTCAACTTT+TGG 0.338143 3_2:+16708656 None:intergenic
TCATCATAGGAGAGTAATTA+TGG 0.342092 3_2:-16708411 Msa0397350:CDS
TTGTGATCTACAATGCAATA+TGG 0.351644 3_2:-16708177 Msa0397350:CDS
AAAACAGCATAGAGCAATCT+TGG 0.351773 3_2:+16708334 None:intergenic
GCATACTTCTATGACATTGT+TGG 0.387812 3_2:+16708502 None:intergenic
ATTTATGGTATCGGTGGAAT+AGG 0.393269 3_2:-16709189 Msa0397350:CDS
TGGTCTCCCCTTGGCTTTGG+AGG 0.402758 3_2:-16708685 Msa0397350:CDS
TACAAGAGACAAGCATTTGT+TGG 0.410608 3_2:-16708853 Msa0397350:CDS
GTGTGAAATACTTGGGGAAA+AGG 0.417058 3_2:-16709040 Msa0397350:CDS
GTAGGAGGACCTGATTGGTT+TGG 0.425738 3_2:-16708900 Msa0397350:CDS
AAACAGCATAGAGCAATCTT+GGG 0.427407 3_2:+16708335 None:intergenic
CACTACTGTGTGAAATACTT+GGG 0.436674 3_2:-16709047 Msa0397350:CDS
GGACCTGATTGGTTTGGATT+CGG 0.436959 3_2:-16708894 Msa0397350:CDS
TTGTTTGCTGATCAATTTGA+AGG 0.437445 3_2:-16709135 Msa0397350:CDS
TCAAACACCGCGTTGTGAAA+CGG 0.444914 3_2:+16708296 None:intergenic
TTTGTCACCCAGCTCATCAT+AGG 0.449141 3_2:-16708424 Msa0397350:CDS
TAGGAGAGTAATTATGGATA+AGG 0.452189 3_2:-16708405 Msa0397350:CDS
CTTCCGAATCCAAACCAATC+AGG 0.453295 3_2:+16708891 None:intergenic
ATTACTCTCCTATGATGAGC+TGG 0.459061 3_2:+16708416 None:intergenic
ACACTACTGTGTGAAATACT+TGG 0.459873 3_2:-16709048 Msa0397350:CDS
AAGCATTTGTTGGCTACTCA+TGG 0.459943 3_2:-16708843 Msa0397350:CDS
AAGTTGAATGTACTCATCAA+TGG 0.468099 3_2:-16708269 Msa0397350:CDS
TTATTGTCATGGTCTCCCCT+TGG 0.470723 3_2:-16708694 Msa0397350:CDS
CACTTGTAGGAGGACCTGAT+TGG 0.474853 3_2:-16708905 Msa0397350:CDS
GGGGCTTGACTTGCAACGAC+TGG 0.476164 3_2:-16708073 Msa0397350:CDS
TAGAAGTATGCAGTCCTTCG+TGG 0.486984 3_2:-16708490 Msa0397350:CDS
CAGCAGTTACATGCACTTGT+AGG 0.487112 3_2:-16708918 Msa0397350:CDS
GGCAATAACCTCCAAAGCCA+AGG 0.498112 3_2:+16708677 None:intergenic
ATGGTTGGCATTTATGGTAT+CGG 0.508044 3_2:-16709198 Msa0397350:CDS
AGTAATATCGCATCATCGTA+GGG 0.510670 3_2:-16708642 Msa0397350:CDS
TATGTATTAGTCAACATGGT+TGG 0.512148 3_2:-16709213 None:intergenic
GAGCATAAACTCAAAAGTAT+TGG 0.516610 3_2:-16708458 Msa0397350:CDS
CATGCCATGTGATTCTGAAA+GGG 0.520562 3_2:-16708093 Msa0397350:CDS
TGGGGAAAAGGATATTAAAG+TGG 0.522974 3_2:-16709028 Msa0397350:CDS
TGTATAATATATGTATTCAC+AGG 0.524029 3_2:+16708226 None:intergenic
TCATGCCATGTGATTCTGAA+AGG 0.532470 3_2:-16708094 Msa0397350:CDS
AGCATTTGTTGGCTACTCAT+GGG 0.545896 3_2:-16708842 Msa0397350:CDS
TCTTGGTGACATAAGAAAGC+GGG 0.554691 3_2:-16709103 Msa0397350:CDS
TAGTAATATCGCATCATCGT+AGG 0.557172 3_2:-16708643 Msa0397350:CDS
CAACGACTGGATCACTAAAG+TGG 0.572416 3_2:-16708060 Msa0397350:CDS
CGTGCAGTATCTTATTGTCA+TGG 0.575349 3_2:-16708705 Msa0397350:intron
GGGGAAAAGGATATTAAAGT+GGG 0.585634 3_2:-16709027 Msa0397350:CDS
TTACTCTCCTATGATGAGCT+GGG 0.589950 3_2:+16708417 None:intergenic
ATGCCATGTGATTCTGAAAG+GGG 0.591999 3_2:-16708092 Msa0397350:CDS
GCAATAACCTCCAAAGCCAA+GGG 0.598094 3_2:+16708678 None:intergenic
CAGTTACATGCACTTGTAGG+AGG 0.602322 3_2:-16708915 Msa0397350:CDS
GTTGGCATTTATGGTATCGG+TGG 0.603125 3_2:-16709195 Msa0397350:CDS
GTATATTCTCAGAGAATGAG+TGG 0.607963 3_2:-16708151 Msa0397350:CDS
AAGAGAATACACATTAAGGA+AGG 0.619547 3_2:+16708535 None:intergenic
ACTACTGTGTGAAATACTTG+GGG 0.626837 3_2:-16709046 Msa0397350:CDS
TGCTCGTCTTGATTCCACGA+AGG 0.636859 3_2:+16708476 None:intergenic
AACAGCATAGAGCAATCTTG+GGG 0.644451 3_2:+16708336 None:intergenic
TTCTTGGTGACATAAGAAAG+CGG 0.652512 3_2:-16709104 Msa0397350:CDS
GATCTACAATGCAATATGGA+TGG 0.665254 3_2:-16708173 Msa0397350:CDS
TGGGATTGTGAAAGTATATG+CGG 0.674186 3_2:-16708823 Msa0397350:intron
AGAGAATGAGTGGAACCATG+TGG 0.681901 3_2:-16708141 Msa0397350:CDS
AAGCCCCTTTCAGAATCACA+TGG 0.686998 3_2:+16708089 None:intergenic
TGTCTACAAAGAAAACAATG+AGG 0.698727 3_2:-16708026 None:intergenic
GTAATATCGCATCATCGTAG+GGG 0.700653 3_2:-16708641 Msa0397350:CDS
CAATAACCTCCAAAGCCAAG+GGG 0.710146 3_2:+16708679 None:intergenic
TGGAGAGCCGTTTCACAACG+CGG 0.715206 3_2:-16708303 Msa0397350:CDS
GCTCACATGAAATCTCCACA+TGG 0.749384 3_2:+16708126 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGACAACTAAAAAATGAAA+AGG - chr3_2:16708427-16708446 Msa0397350:CDS 20.0%
!!! ATGTGTGTTTTTAATGAATA+CGG - chr3_2:16708663-16708682 Msa0397350:CDS 20.0%
!! TGTATAATATATGTATTCAC+AGG + chr3_2:16709003-16709022 None:intergenic 20.0%
!! TAGACAACTAAAAAATGAAA+AGG - chr3_2:16708427-16708446 Msa0397350:CDS 20.0%
!!! ATGTGTGTTTTTAATGAATA+CGG - chr3_2:16708663-16708682 Msa0397350:CDS 20.0%
!! TGTATAATATATGTATTCAC+AGG + chr3_2:16709003-16709022 None:intergenic 20.0%
! AGGGAATGTCAATAATTAAA+CGG - chr3_2:16708234-16708253 Msa0397350:CDS 25.0%
! CAACATTATCAACAATCAAA+AGG + chr3_2:16708280-16708299 None:intergenic 25.0%
!! GATATTACTATCTCAACTTT+TGG + chr3_2:16708573-16708592 None:intergenic 25.0%
! GTATTCATTAAAAACACACA+TGG + chr3_2:16708664-16708683 None:intergenic 25.0%
!!! TGTGTGTTTTTAATGAATAC+GGG - chr3_2:16708664-16708683 Msa0397350:CDS 25.0%
! CATTAAGAGAATACACATTA+AGG + chr3_2:16708698-16708717 None:intergenic 25.0%
! AGGGAATGTCAATAATTAAA+CGG - chr3_2:16708234-16708253 Msa0397350:CDS 25.0%
! CAACATTATCAACAATCAAA+AGG + chr3_2:16708280-16708299 None:intergenic 25.0%
!! GATATTACTATCTCAACTTT+TGG + chr3_2:16708573-16708592 None:intergenic 25.0%
! GTATTCATTAAAAACACACA+TGG + chr3_2:16708664-16708683 None:intergenic 25.0%
!!! TGTGTGTTTTTAATGAATAC+GGG - chr3_2:16708664-16708683 Msa0397350:CDS 25.0%
! CATTAAGAGAATACACATTA+AGG + chr3_2:16708698-16708717 None:intergenic 25.0%
! TTGTTTGCTGATCAATTTGA+AGG - chr3_2:16708091-16708110 Msa0397350:CDS 30.0%
GAATGTCAATAATTAAACGG+AGG - chr3_2:16708237-16708256 Msa0397350:CDS 30.0%
ACTAAAAAATGAAAAGGCTC+TGG - chr3_2:16708433-16708452 Msa0397350:CDS 30.0%
AAAAATCGATCCAAGTTATG+TGG - chr3_2:16708487-16708506 Msa0397350:CDS 30.0%
TTTGCAATATCCACATAACT+TGG + chr3_2:16708500-16708519 None:intergenic 30.0%
AAGAGAATACACATTAAGGA+AGG + chr3_2:16708694-16708713 None:intergenic 30.0%
! GAGCATAAACTCAAAAGTAT+TGG - chr3_2:16708768-16708787 Msa0397350:intron 30.0%
TCATCATAGGAGAGTAATTA+TGG - chr3_2:16708815-16708834 Msa0397350:intron 30.0%
TAGGAGAGTAATTATGGATA+AGG - chr3_2:16708821-16708840 Msa0397350:intron 30.0%
!!! CTATGCTGTTTTTTTGAAAC+TGG - chr3_2:16708903-16708922 Msa0397350:CDS 30.0%
AAGTTGAATGTACTCATCAA+TGG - chr3_2:16708957-16708976 Msa0397350:intron 30.0%
! GTAGATCACAACAAAACTTT+TGG + chr3_2:16709040-16709059 None:intergenic 30.0%
TTGTGATCTACAATGCAATA+TGG - chr3_2:16709049-16709068 Msa0397350:CDS 30.0%
! TTGTTTGCTGATCAATTTGA+AGG - chr3_2:16708091-16708110 Msa0397350:CDS 30.0%
GAATGTCAATAATTAAACGG+AGG - chr3_2:16708237-16708256 Msa0397350:CDS 30.0%
ACTAAAAAATGAAAAGGCTC+TGG - chr3_2:16708433-16708452 Msa0397350:CDS 30.0%
AAAAATCGATCCAAGTTATG+TGG - chr3_2:16708487-16708506 Msa0397350:CDS 30.0%
TTTGCAATATCCACATAACT+TGG + chr3_2:16708500-16708519 None:intergenic 30.0%
AAGAGAATACACATTAAGGA+AGG + chr3_2:16708694-16708713 None:intergenic 30.0%
! GAGCATAAACTCAAAAGTAT+TGG - chr3_2:16708768-16708787 Msa0397350:intron 30.0%
TCATCATAGGAGAGTAATTA+TGG - chr3_2:16708815-16708834 Msa0397350:intron 30.0%
TAGGAGAGTAATTATGGATA+AGG - chr3_2:16708821-16708840 Msa0397350:intron 30.0%
!!! CTATGCTGTTTTTTTGAAAC+TGG - chr3_2:16708903-16708922 Msa0397350:CDS 30.0%
AAGTTGAATGTACTCATCAA+TGG - chr3_2:16708957-16708976 Msa0397350:intron 30.0%
! GTAGATCACAACAAAACTTT+TGG + chr3_2:16709040-16709059 None:intergenic 30.0%
TTGTGATCTACAATGCAATA+TGG - chr3_2:16709049-16709068 Msa0397350:CDS 30.0%
ATGGTTGGCATTTATGGTAT+CGG - chr3_2:16708028-16708047 Msa0397350:CDS 35.0%
!! ATTTATGGTATCGGTGGAAT+AGG - chr3_2:16708037-16708056 Msa0397350:CDS 35.0%
!! TTTGAAGGTGTGTGTTTTCT+TGG - chr3_2:16708106-16708125 Msa0397350:CDS 35.0%
! TTCTTGGTGACATAAGAAAG+CGG - chr3_2:16708122-16708141 Msa0397350:CDS 35.0%
TTTCACACAGTAGTGTTTCT+TGG + chr3_2:16708174-16708193 None:intergenic 35.0%
ACACTACTGTGTGAAATACT+TGG - chr3_2:16708178-16708197 Msa0397350:CDS 35.0%
CACTACTGTGTGAAATACTT+GGG - chr3_2:16708179-16708198 Msa0397350:CDS 35.0%
ACTACTGTGTGAAATACTTG+GGG - chr3_2:16708180-16708199 Msa0397350:CDS 35.0%
TGGGGAAAAGGATATTAAAG+TGG - chr3_2:16708198-16708217 Msa0397350:CDS 35.0%
GGGGAAAAGGATATTAAAGT+GGG - chr3_2:16708199-16708218 Msa0397350:CDS 35.0%
TACAAGAGACAAGCATTTGT+TGG - chr3_2:16708373-16708392 Msa0397350:CDS 35.0%
! TGGGATTGTGAAAGTATATG+CGG - chr3_2:16708403-16708422 Msa0397350:CDS 35.0%
TAGTAATATCGCATCATCGT+AGG - chr3_2:16708583-16708602 Msa0397350:CDS 35.0%
AGTAATATCGCATCATCGTA+GGG - chr3_2:16708584-16708603 Msa0397350:CDS 35.0%
GCATACTTCTATGACATTGT+TGG + chr3_2:16708727-16708746 None:intergenic 35.0%
TTTCGAAACCAAAAATGCAC+TGG + chr3_2:16708864-16708883 None:intergenic 35.0%
AAACAGCATAGAGCAATCTT+GGG + chr3_2:16708894-16708913 None:intergenic 35.0%
AAAACAGCATAGAGCAATCT+TGG + chr3_2:16708895-16708914 None:intergenic 35.0%
GATCTACAATGCAATATGGA+TGG - chr3_2:16709053-16709072 Msa0397350:CDS 35.0%
GTATATTCTCAGAGAATGAG+TGG - chr3_2:16709075-16709094 Msa0397350:CDS 35.0%
ATGGTTGGCATTTATGGTAT+CGG - chr3_2:16708028-16708047 Msa0397350:CDS 35.0%
!! ATTTATGGTATCGGTGGAAT+AGG - chr3_2:16708037-16708056 Msa0397350:CDS 35.0%
!! TTTGAAGGTGTGTGTTTTCT+TGG - chr3_2:16708106-16708125 Msa0397350:CDS 35.0%
! TTCTTGGTGACATAAGAAAG+CGG - chr3_2:16708122-16708141 Msa0397350:CDS 35.0%
TTTCACACAGTAGTGTTTCT+TGG + chr3_2:16708174-16708193 None:intergenic 35.0%
ACACTACTGTGTGAAATACT+TGG - chr3_2:16708178-16708197 Msa0397350:CDS 35.0%
CACTACTGTGTGAAATACTT+GGG - chr3_2:16708179-16708198 Msa0397350:CDS 35.0%
ACTACTGTGTGAAATACTTG+GGG - chr3_2:16708180-16708199 Msa0397350:CDS 35.0%
TGGGGAAAAGGATATTAAAG+TGG - chr3_2:16708198-16708217 Msa0397350:CDS 35.0%
GGGGAAAAGGATATTAAAGT+GGG - chr3_2:16708199-16708218 Msa0397350:CDS 35.0%
TACAAGAGACAAGCATTTGT+TGG - chr3_2:16708373-16708392 Msa0397350:CDS 35.0%
! TGGGATTGTGAAAGTATATG+CGG - chr3_2:16708403-16708422 Msa0397350:CDS 35.0%
TAGTAATATCGCATCATCGT+AGG - chr3_2:16708583-16708602 Msa0397350:CDS 35.0%
AGTAATATCGCATCATCGTA+GGG - chr3_2:16708584-16708603 Msa0397350:CDS 35.0%
GCATACTTCTATGACATTGT+TGG + chr3_2:16708727-16708746 None:intergenic 35.0%
TTTCGAAACCAAAAATGCAC+TGG + chr3_2:16708864-16708883 None:intergenic 35.0%
AAACAGCATAGAGCAATCTT+GGG + chr3_2:16708894-16708913 None:intergenic 35.0%
AAAACAGCATAGAGCAATCT+TGG + chr3_2:16708895-16708914 None:intergenic 35.0%
GATCTACAATGCAATATGGA+TGG - chr3_2:16709053-16709072 Msa0397350:CDS 35.0%
GTATATTCTCAGAGAATGAG+TGG - chr3_2:16709075-16709094 Msa0397350:CDS 35.0%
! TCTTGGTGACATAAGAAAGC+GGG - chr3_2:16708123-16708142 Msa0397350:CDS 40.0%
GTGTGAAATACTTGGGGAAA+AGG - chr3_2:16708186-16708205 Msa0397350:CDS 40.0%
AAAGTGGGAGTTGTATACAG+AGG - chr3_2:16708214-16708233 Msa0397350:CDS 40.0%
AAGTGGGAGTTGTATACAGA+GGG - chr3_2:16708215-16708234 Msa0397350:CDS 40.0%
! AAGCATTTGTTGGCTACTCA+TGG - chr3_2:16708383-16708402 Msa0397350:CDS 40.0%
! AGCATTTGTTGGCTACTCAT+GGG - chr3_2:16708384-16708403 Msa0397350:CDS 40.0%
!! AGGCTCTGGAATTGTTTAGT+TGG - chr3_2:16708447-16708466 Msa0397350:CDS 40.0%
CGTGCAGTATCTTATTGTCA+TGG - chr3_2:16708521-16708540 Msa0397350:CDS 40.0%
GTAATATCGCATCATCGTAG+GGG - chr3_2:16708585-16708604 Msa0397350:CDS 40.0%
! ATGGCATTTGCAGACTCTTT+TGG + chr3_2:16708645-16708664 None:intergenic 40.0%
TTACTCTCCTATGATGAGCT+GGG + chr3_2:16708812-16708831 None:intergenic 40.0%
ATTACTCTCCTATGATGAGC+TGG + chr3_2:16708813-16708832 None:intergenic 40.0%
AACAGCATAGAGCAATCTTG+GGG + chr3_2:16708893-16708912 None:intergenic 40.0%
TCATGCCATGTGATTCTGAA+AGG - chr3_2:16709132-16709151 Msa0397350:CDS 40.0%
! CATGCCATGTGATTCTGAAA+GGG - chr3_2:16709133-16709152 Msa0397350:CDS 40.0%
! ATGCCATGTGATTCTGAAAG+GGG - chr3_2:16709134-16709153 Msa0397350:CDS 40.0%
! TCTTGGTGACATAAGAAAGC+GGG - chr3_2:16708123-16708142 Msa0397350:CDS 40.0%
GTGTGAAATACTTGGGGAAA+AGG - chr3_2:16708186-16708205 Msa0397350:CDS 40.0%
AAAGTGGGAGTTGTATACAG+AGG - chr3_2:16708214-16708233 Msa0397350:CDS 40.0%
AAGTGGGAGTTGTATACAGA+GGG - chr3_2:16708215-16708234 Msa0397350:CDS 40.0%
! AAGCATTTGTTGGCTACTCA+TGG - chr3_2:16708383-16708402 Msa0397350:CDS 40.0%
! AGCATTTGTTGGCTACTCAT+GGG - chr3_2:16708384-16708403 Msa0397350:CDS 40.0%
!! AGGCTCTGGAATTGTTTAGT+TGG - chr3_2:16708447-16708466 Msa0397350:CDS 40.0%
CGTGCAGTATCTTATTGTCA+TGG - chr3_2:16708521-16708540 Msa0397350:CDS 40.0%
GTAATATCGCATCATCGTAG+GGG - chr3_2:16708585-16708604 Msa0397350:CDS 40.0%
! ATGGCATTTGCAGACTCTTT+TGG + chr3_2:16708645-16708664 None:intergenic 40.0%
TTACTCTCCTATGATGAGCT+GGG + chr3_2:16708812-16708831 None:intergenic 40.0%
ATTACTCTCCTATGATGAGC+TGG + chr3_2:16708813-16708832 None:intergenic 40.0%
AACAGCATAGAGCAATCTTG+GGG + chr3_2:16708893-16708912 None:intergenic 40.0%
TCATGCCATGTGATTCTGAA+AGG - chr3_2:16709132-16709151 Msa0397350:CDS 40.0%
! CATGCCATGTGATTCTGAAA+GGG - chr3_2:16709133-16709152 Msa0397350:CDS 40.0%
! ATGCCATGTGATTCTGAAAG+GGG - chr3_2:16709134-16709153 Msa0397350:CDS 40.0%
! GTTGGCATTTATGGTATCGG+TGG - chr3_2:16708031-16708050 Msa0397350:CDS 45.0%
CAGCAGTTACATGCACTTGT+AGG - chr3_2:16708308-16708327 Msa0397350:CDS 45.0%
CAGTTACATGCACTTGTAGG+AGG - chr3_2:16708311-16708330 Msa0397350:CDS 45.0%
!! GGACCTGATTGGTTTGGATT+CGG - chr3_2:16708332-16708351 Msa0397350:CDS 45.0%
CTTCCGAATCCAAACCAATC+AGG + chr3_2:16708338-16708357 None:intergenic 45.0%
TTATTGTCATGGTCTCCCCT+TGG - chr3_2:16708532-16708551 Msa0397350:CDS 45.0%
CAATAACCTCCAAAGCCAAG+GGG + chr3_2:16708550-16708569 None:intergenic 45.0%
GCAATAACCTCCAAAGCCAA+GGG + chr3_2:16708551-16708570 None:intergenic 45.0%
! TAGAAGTATGCAGTCCTTCG+TGG - chr3_2:16708736-16708755 Msa0397350:intron 45.0%
TTTGTCACCCAGCTCATCAT+AGG - chr3_2:16708802-16708821 Msa0397350:intron 45.0%
! ACGAATCGCCAGTGCATTTT+TGG - chr3_2:16708853-16708872 Msa0397350:CDS 45.0%
TCAAACACCGCGTTGTGAAA+CGG + chr3_2:16708933-16708952 None:intergenic 45.0%
AGAGAATGAGTGGAACCATG+TGG - chr3_2:16709085-16709104 Msa0397350:CDS 45.0%
GCTCACATGAAATCTCCACA+TGG + chr3_2:16709103-16709122 None:intergenic 45.0%
AAGCCCCTTTCAGAATCACA+TGG + chr3_2:16709140-16709159 None:intergenic 45.0%
CAACGACTGGATCACTAAAG+TGG - chr3_2:16709166-16709185 Msa0397350:CDS 45.0%
! GTTGGCATTTATGGTATCGG+TGG - chr3_2:16708031-16708050 Msa0397350:CDS 45.0%
CAGCAGTTACATGCACTTGT+AGG - chr3_2:16708308-16708327 Msa0397350:CDS 45.0%
CAGTTACATGCACTTGTAGG+AGG - chr3_2:16708311-16708330 Msa0397350:CDS 45.0%
!! GGACCTGATTGGTTTGGATT+CGG - chr3_2:16708332-16708351 Msa0397350:CDS 45.0%
CTTCCGAATCCAAACCAATC+AGG + chr3_2:16708338-16708357 None:intergenic 45.0%
TTATTGTCATGGTCTCCCCT+TGG - chr3_2:16708532-16708551 Msa0397350:CDS 45.0%
CAATAACCTCCAAAGCCAAG+GGG + chr3_2:16708550-16708569 None:intergenic 45.0%
GCAATAACCTCCAAAGCCAA+GGG + chr3_2:16708551-16708570 None:intergenic 45.0%
! TAGAAGTATGCAGTCCTTCG+TGG - chr3_2:16708736-16708755 Msa0397350:intron 45.0%
TTTGTCACCCAGCTCATCAT+AGG - chr3_2:16708802-16708821 Msa0397350:intron 45.0%
! ACGAATCGCCAGTGCATTTT+TGG - chr3_2:16708853-16708872 Msa0397350:CDS 45.0%
TCAAACACCGCGTTGTGAAA+CGG + chr3_2:16708933-16708952 None:intergenic 45.0%
AGAGAATGAGTGGAACCATG+TGG - chr3_2:16709085-16709104 Msa0397350:CDS 45.0%
GCTCACATGAAATCTCCACA+TGG + chr3_2:16709103-16709122 None:intergenic 45.0%
AAGCCCCTTTCAGAATCACA+TGG + chr3_2:16709140-16709159 None:intergenic 45.0%
CAACGACTGGATCACTAAAG+TGG - chr3_2:16709166-16709185 Msa0397350:CDS 45.0%
CACTTGTAGGAGGACCTGAT+TGG - chr3_2:16708321-16708340 Msa0397350:CDS 50.0%
! GTAGGAGGACCTGATTGGTT+TGG - chr3_2:16708326-16708345 Msa0397350:CDS 50.0%
GGCAATAACCTCCAAAGCCA+AGG + chr3_2:16708552-16708571 None:intergenic 50.0%
TGCTCGTCTTGATTCCACGA+AGG + chr3_2:16708753-16708772 None:intergenic 50.0%
CACTTGTAGGAGGACCTGAT+TGG - chr3_2:16708321-16708340 Msa0397350:CDS 50.0%
! GTAGGAGGACCTGATTGGTT+TGG - chr3_2:16708326-16708345 Msa0397350:CDS 50.0%
GGCAATAACCTCCAAAGCCA+AGG + chr3_2:16708552-16708571 None:intergenic 50.0%
TGCTCGTCTTGATTCCACGA+AGG + chr3_2:16708753-16708772 None:intergenic 50.0%
TCATGGTCTCCCCTTGGCTT+TGG - chr3_2:16708538-16708557 Msa0397350:CDS 55.0%
TGGAGAGCCGTTTCACAACG+CGG - chr3_2:16708923-16708942 Msa0397350:intron 55.0%
TCATGGTCTCCCCTTGGCTT+TGG - chr3_2:16708538-16708557 Msa0397350:CDS 55.0%
TGGAGAGCCGTTTCACAACG+CGG - chr3_2:16708923-16708942 Msa0397350:intron 55.0%
!! TGGTCTCCCCTTGGCTTTGG+AGG - chr3_2:16708541-16708560 Msa0397350:CDS 60.0%
!! GGGGCTTGACTTGCAACGAC+TGG - chr3_2:16709153-16709172 Msa0397350:CDS 60.0%
!! TGGTCTCCCCTTGGCTTTGG+AGG - chr3_2:16708541-16708560 Msa0397350:CDS 60.0%
!! GGGGCTTGACTTGCAACGAC+TGG - chr3_2:16709153-16709172 Msa0397350:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 16708028 16709220 16708028 ID=Msa0397350;Name=Msa0397350
chr3_2 mRNA 16708028 16709220 16708028 ID=Msa0397350-mRNA-1;Parent=Msa0397350;Name=Msa0397350-mRNA-1;_AED=0.39;_eAED=0.46;_QI=0|0|0|0.33|1|1|3|0|334
chr3_2 exon 16709023 16709220 16709023 ID=Msa0397350-mRNA-1:exon:3801;Parent=Msa0397350-mRNA-1
chr3_2 exon 16708824 16708937 16708824 ID=Msa0397350-mRNA-1:exon:3800;Parent=Msa0397350-mRNA-1
chr3_2 exon 16708028 16708720 16708028 ID=Msa0397350-mRNA-1:exon:3799;Parent=Msa0397350-mRNA-1
chr3_2 CDS 16709023 16709220 16709023 ID=Msa0397350-mRNA-1:cds;Parent=Msa0397350-mRNA-1
chr3_2 CDS 16708824 16708937 16708824 ID=Msa0397350-mRNA-1:cds;Parent=Msa0397350-mRNA-1
chr3_2 CDS 16708028 16708720 16708028 ID=Msa0397350-mRNA-1:cds;Parent=Msa0397350-mRNA-1
Gene Sequence

>Msa0397350

ATGGTTGGCATTTATGGTATCGGTGGAATAGGCAAATCAACAACTGCTCGTGCTGTGCATAACTTGTTTGCTGATCAATTTGAAGGTGTGTGTTTTCTTGGTGACATAAGAAAGCGGGCAACAAATCATGATCTGACACAACTCCAAGAAACACTACTGTGTGAAATACTTGGGGAAAAGGATATTAAAGTGGGAGTTCAGTTACATGCACTTGTAGGAGGACCTGATTGGTTTGGATTCGGAAGCAAGATCATAATCACTACAAGAGACAAGCATTTGTTGGCTACTCATGGGATTGTGAAAGTATATGCGTATCTTATTGTCATGGTCTCCCCTTGGCTTTGGAGGTTATTGCCAAAAGTTGAGATAGTAATATCGCATCATCGTAGGGGAGTTCGATCATCAAATGATGCAGAAAAAGTGAGTCCAAAAGAGTCTGCAAATGCCATGTGTGTTTTTAATGAATACGGGAAGTCCTTCCTTAATGTGTATTCTCTTAATGTAAGTTCCAACAATGTCATAGAAGTATGCAGTCCTTCGTGGAATCAAGACGAGCATAAACTCAAAAGTATTGGTTATCATCTCTTTTGTCACCCAGCTCATCATAGGAGAGTAATTATGGATAAGGTTAGAAGCAACGAATCGCCAGTGCATTTTTGGTTTCGAAAAAAATTCCCCAAGATTGCTCTATGCTGTTTTTTTGAAACTGGAGAGCCGTTTCACAACGCGGTGTTTGATTTCAAGTTGAATGTACTCATCAATGGCACTAAGCAACTCTCTACTTCCTGTGAATACATATATTATACAAAAAGAAAGACGCGCCAAAAGTTTTGTTGTGATCTACAATGCAATATGGATGGTATATTCTCAGAGAATGAGTGGAACCATGTGGAGATTTCATGTGAGCTTGAACGTCTCATGCCATGTGATTCTGAAAGGGGCTTGACTTGCAACGACTGGATCACTAAAGTGGTCTGTCATACATGTCTACAAAGAAAACAATGA
Protein sequence

>Msa0397350

MVGIYGIGGIGKSTTARAVHNLFADQFEGVCFLGDIRKRATNHDLTQLQETLLCEILGEKDIKVGVQLHALVGGPDWFGFGSKIIITTRDKHLLATHGIVKVYAYLIVMVSPWLWRLLPKVEIVISHHRRGVRSSNDAEKVSPKESANAMCVFNEYGKSFLNVYSLNVSSNNVIEVCSPSWNQDEHKLKSIGYHLFCHPAHHRRVIMDKVRSNESPVHFWFRKKFPKIALCCFFETGEPFHNAVFDFKLNVLINGTKQLSTSCEYIYYTKRKTRQKFCCDLQCNMDGIFSENEWNHVEISCELERLMPCDSERGLTCNDWITKVVCHTCLQRKQ*