AlfalfaGEDB | Msa0487440

M. sativa cultivar zhongmu-4 / Msa0487440

KEGG: K04733|K17302
GO: GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010275 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022607 GO:0031224 GO:0031225 GO:0031226 GO:0031976 GO:0031984 GO:0034357 GO:0034622 GO:0036211 GO:0042651 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:0140096 GO:1901564
PFAM: PF01657.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487440	KEH32942.1	92.366	262	20	0	1	262	1	262	1.32e-174	491

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487440	sp\|Q9M0X5\|CRK25_ARATH	31.985	272	166	6	9	262	8	278	2.15e-41	153

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487440	G7ZZG2	92.366	262	20	0	1	262	1	262	6.32e-175	491

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0054310	Msa0487440	0.810251	1.265029e-50	-8.615850e-47
Msa0100080	Msa0487440	0.821000	5.095284e-53	-8.615850e-47
Msa0100090	Msa0487440	0.815824	7.585397e-52	-8.615850e-47
Msa0141250	Msa0487440	0.810939	8.983812e-51	-8.615850e-47
Msa0165510	Msa0487440	0.800025	1.748641e-48	-8.615850e-47
Msa0173990	Msa0487440	0.805548	1.265738e-49	-8.615850e-47
Msa0197660	Msa0487440	0.803996	2.669869e-49	-8.615850e-47
Msa0212310	Msa0487440	0.819604	1.064176e-52	-8.615850e-47
Msa0389280	Msa0487440	0.804095	2.546216e-49	-8.615850e-47
Msa0397350	Msa0487440	0.813574	2.389050e-51	-8.615850e-47
Msa0398370	Msa0487440	0.833426	5.369621e-56	-8.615850e-47
Msa0398380	Msa0487440	0.811564	6.573741e-51	-8.615850e-47
Msa0432300	Msa0487440	0.802985	4.326157e-49	-8.615850e-47
Msa0445280	Msa0487440	0.806632	7.486119e-50	-8.615850e-47
Msa0239800	Msa0487440	0.806866	6.679585e-50	-8.615850e-47
Msa0317510	Msa0487440	0.810730	9.965821e-51	-8.615850e-47
Msa0484780	Msa0487440	0.804775	1.836861e-49	-8.615850e-47
Msa0487440	Msa0503190	0.802045	6.757058e-49	-8.615850e-47
Msa0487440	Msa0558690	0.821740	3.438021e-53	-8.615850e-47
Msa0487440	Msa0559190	0.805451	1.326621e-49	-8.615850e-47
Msa0487440	Msa0623080	0.801717	7.894381e-49	-8.615850e-47
Msa0487440	Msa0626280	0.805655	1.202037e-49	-8.615850e-47
Msa0487440	Msa0648860	0.809032	2.312273e-50	-8.615850e-47
Msa0487440	Msa0654010	0.803441	3.481750e-49	-8.615850e-47
Msa0487440	Msa0682550	0.810072	1.382115e-50	-8.615850e-47
Msa0487440	Msa0693380	0.825578	4.343893e-54	-8.615850e-47
Msa0487440	Msa0766630	0.800582	1.347204e-48	-8.615850e-47
Msa0487440	Msa0842650	0.808988	2.362796e-50	-8.615850e-47
Msa0487440	Msa0907070	0.805099	1.572155e-49	-8.615850e-47
Msa0487440	Msa1027290	0.804090	2.553017e-49	-8.615850e-47
Msa0487440	Msa1077950	0.802584	5.233306e-49	-8.615850e-47
Msa0487440	Msa1082500	0.820109	8.158861e-53	-8.615850e-47
Msa0487440	Msa1229600	0.814319	1.637235e-51	-8.615850e-47
Msa0487440	Msa1249490	0.815414	9.359066e-52	-8.615850e-47
Msa0487440	Msa1299070	0.807119	5.904773e-50	-8.615850e-47
Msa0487440	Msa1308580	0.806527	7.876128e-50	-8.615850e-47
Msa0487440	Msa1310210	0.807462	4.995007e-50	-8.615850e-47
Msa0487440	Msa1336490	0.804826	1.792777e-49	-8.615850e-47
Msa0487440	Msa1381960	0.804470	2.127458e-49	-8.615850e-47
Msa0487440	Msa1384290	0.809464	1.868077e-50	-8.615850e-47
Msa0487440	Msa1393410	0.813619	2.335395e-51	-8.615850e-47
Msa0487440	Msa1424680	0.803344	3.645675e-49	-8.615850e-47
Msa0487440	Msa1435420	0.814414	1.559542e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487440	MtrunA17_Chr3g0081011	91.188	261	23	0	1	261	1	261	2.25e-169	483
Msa0487440	MtrunA17_Chr3g0081001	86.312	263	35	1	1	262	1	263	4.69e-167	477
Msa0487440	MtrunA17_Chr8g0354271	55.039	258	108	5	4	257	9	262	5.21e-91	282
Msa0487440	MtrunA17_Chr8g0354411	52.500	240	110	2	23	258	22	261	1.30e-88	265
Msa0487440	MtrunA17_Chr8g0354421	51.351	259	118	4	4	258	28	282	1.43e-88	276
Msa0487440	MtrunA17_Chr8g0354351	48.249	257	120	6	12	258	5	258	1.01e-80	255
Msa0487440	MtrunA17_Chr8g0354281	51.452	241	112	3	21	256	20	260	1.10e-79	252
Msa0487440	MtrunA17_Chr8g0354441	47.876	259	123	3	12	258	11	269	2.17e-79	252
Msa0487440	MtrunA17_Chr8g0354431	48.438	256	123	3	12	258	6	261	7.37e-78	248
Msa0487440	MtrunA17_Chr8g0354341	44.262	244	129	4	21	258	19	261	2.13e-69	214
Msa0487440	MtrunA17_Chr3g0082951	81.553	103	19	0	32	134	119	221	1.12e-55	178
Msa0487440	MtrunA17_Chr3g0081051	38.426	216	131	2	46	259	40	255	2.45e-51	168
Msa0487440	MtrunA17_Chr3g0081031	38.117	223	136	2	35	255	47	269	7.43e-47	165
Msa0487440	MtrunA17_Chr3g0082941	80.435	92	15	1	164	252	1	92	4.00e-44	155
Msa0487440	MtrunA17_Chr1g0206531	33.333	258	164	5	6	257	8	263	7.25e-42	151
Msa0487440	MtrunA17_Chr2g0323011	34.167	240	153	5	7	243	6	243	1.49e-40	140
Msa0487440	MtrunA17_Chr7g0234231	34.413	247	157	5	10	253	3	247	1.22e-39	138
Msa0487440	MtrunA17_Chr2g0322981	30.705	241	164	3	7	245	6	245	1.15e-37	132
Msa0487440	MtrunA17_Chr1g0206291	30.651	261	167	7	5	258	23	276	4.07e-36	134
Msa0487440	MtrunA17_Chr1g0205771	33.761	234	149	5	30	257	40	273	9.04e-36	134
Msa0487440	MtrunA17_Chr6g0475001	34.201	269	150	9	2	256	4	259	1.43e-35	134
Msa0487440	MtrunA17_Chr6g0475001	27.197	239	159	6	24	255	274	504	6.94e-23	97.8
Msa0487440	MtrunA17_Chr5g0394001	32.917	240	152	5	14	246	14	251	1.75e-35	134
Msa0487440	MtrunA17_Chr5g0428591	30.769	247	155	6	5	245	9	245	5.08e-35	126
Msa0487440	MtrunA17_Chr1g0206461	30.894	246	161	4	16	258	17	256	5.54e-35	132
Msa0487440	MtrunA17_Chr1g0154361	33.603	247	155	6	7	245	8	253	1.52e-34	126
Msa0487440	MtrunA17_Chr1g0154311	34.222	225	135	5	30	245	33	253	2.74e-34	130
Msa0487440	MtrunA17_Chr2g0280391	33.000	200	130	4	46	244	50	246	2.78e-34	125
Msa0487440	MtrunA17_Chr1g0206331	33.205	259	160	8	10	258	11	266	3.73e-34	130
Msa0487440	MtrunA17_Chr6g0474971	32.453	265	150	7	4	256	5	252	5.91e-34	124
Msa0487440	MtrunA17_Chr6g0474901	33.206	262	152	7	4	256	5	252	8.09e-34	129
Msa0487440	MtrunA17_Chr6g0474901	27.386	241	162	6	25	261	268	499	4.40e-24	101
Msa0487440	MtrunA17_Chr2g0280361	31.776	214	130	5	51	257	50	254	1.92e-33	122
Msa0487440	MtrunA17_Chr1g0154341	32.422	256	164	6	10	257	11	265	1.13e-32	120
Msa0487440	MtrunA17_Chr1g0206351	34.483	232	135	5	25	245	29	254	6.06e-32	123
Msa0487440	MtrunA17_Chr1g0206521	30.588	255	173	3	6	257	650	903	2.71e-31	122
Msa0487440	MtrunA17_Chr1g0206521	31.330	233	156	3	28	257	30	261	7.21e-28	112
Msa0487440	MtrunA17_Chr5g0428531	32.000	250	153	7	5	246	9	249	8.44e-31	116
Msa0487440	MtrunA17_Chr5g0428571	33.043	230	143	7	22	245	22	246	1.80e-30	119
Msa0487440	MtrunA17_Chr1g0154351	30.924	249	163	5	7	247	8	255	2.63e-30	119
Msa0487440	MtrunA17_Chr6g0474811	31.716	268	156	5	2	253	4	260	4.44e-30	118
Msa0487440	MtrunA17_Chr6g0474811	30.380	237	152	9	25	257	277	504	2.18e-24	102
Msa0487440	MtrunA17_Chr1g0206451	30.620	258	172	3	6	257	42	298	6.67e-30	117
Msa0487440	MtrunA17_Chr1g0206571	29.412	221	145	6	35	245	39	258	2.76e-29	112
Msa0487440	MtrunA17_Chr5g0394021	33.690	187	119	3	60	244	64	247	7.16e-29	114
Msa0487440	MtrunA17_Chr5g0393981	30.400	250	163	5	1	244	73	317	9.19e-29	114
Msa0487440	MtrunA17_Chr6g0475091	33.475	236	148	4	25	251	31	266	2.78e-28	113
Msa0487440	MtrunA17_Chr6g0475091	29.148	223	146	6	26	244	285	499	4.06e-24	101
Msa0487440	MtrunA17_Chr1g0154371	32.850	207	131	7	45	244	61	266	4.79e-28	112
Msa0487440	MtrunA17_Chr1g0206361	27.848	237	162	3	23	253	29	262	1.40e-27	111
Msa0487440	MtrunA17_Chr6g0475201	31.128	257	157	9	7	251	8	256	1.81e-27	111
Msa0487440	MtrunA17_Chr6g0475201	27.711	249	161	7	21	262	271	507	8.01e-25	103
Msa0487440	MtrunA17_Chr6g0474861	32.661	248	151	9	4	244	5	243	2.19e-27	110
Msa0487440	MtrunA17_Chr6g0475121	33.992	253	155	8	10	251	6	257	1.29e-26	108
Msa0487440	MtrunA17_Chr6g0475121	30.693	202	126	5	50	244	296	490	9.34e-25	102
Msa0487440	MtrunA17_Chr6g0474871	30.980	255	156	6	2	245	4	249	2.56e-26	107
Msa0487440	MtrunA17_Chr6g0474871	27.778	234	157	6	25	254	272	497	1.83e-24	102
Msa0487440	MtrunA17_Chr5g0394011	30.698	215	138	8	46	251	46	258	3.48e-26	107
Msa0487440	MtrunA17_Chr6g0475111	29.609	179	124	2	68	244	74	252	6.55e-26	106
Msa0487440	MtrunA17_Chr6g0475111	30.041	243	149	8	23	254	279	511	7.77e-25	103
Msa0487440	MtrunA17_Chr1g0206651	28.235	255	165	7	5	245	1	251	1.09e-25	101
Msa0487440	MtrunA17_Chr1g0154321	30.736	231	145	7	30	247	31	259	1.25e-25	105
Msa0487440	MtrunA17_Chr2g0280381	28.139	231	151	7	31	257	34	253	1.61e-25	101
Msa0487440	MtrunA17_Chr1g0206561	30.000	250	168	5	8	253	1	247	2.73e-25	104
Msa0487440	MtrunA17_Chr1g0206601	25.379	264	183	6	5	255	24	286	7.65e-25	100
Msa0487440	MtrunA17_Chr8g0347571	31.720	186	122	2	68	252	69	250	1.49e-24	102
Msa0487440	MtrunA17_Chr8g0347571	29.310	232	144	7	25	245	266	488	1.90e-23	99.4
Msa0487440	MtrunA17_Chr1g0206401	29.289	239	145	9	34	257	31	260	7.02e-23	97.8
Msa0487440	MtrunA17_Chr1g0206251	30.736	231	141	9	25	244	287	509	8.32e-23	97.1
Msa0487440	MtrunA17_Chr1g0206251	28.095	210	134	8	59	255	67	272	1.05e-12	67.4
Msa0487440	MtrunA17_Chr1g0206231	27.391	230	159	5	34	257	39	266	8.41e-23	97.4
Msa0487440	MtrunA17_Chr1g0206201	28.854	253	163	8	6	245	6	254	1.03e-22	94.4
Msa0487440	MtrunA17_Chr1g0206381	27.311	238	140	7	45	259	44	271	1.79e-19	86.3
Msa0487440	MtrunA17_Chr7g0262011	28.511	235	157	6	8	238	74	301	7.95e-19	84.7
Msa0487440	MtrunA17_Chr3g0119041	29.310	232	141	5	34	245	34	262	1.60e-18	84.7
Msa0487440	MtrunA17_Chr1g0206421	33.121	157	80	5	73	210	1	151	3.31e-18	84.0
Msa0487440	MtrunA17_Chr5g0426941	25.541	231	160	7	36	255	26	255	4.84e-18	83.6
Msa0487440	MtrunA17_Chr3g0110311	25.652	230	155	4	10	238	7	221	1.46e-16	77.4
Msa0487440	MtrunA17_Chr7g0230381	30.435	207	122	7	47	245	56	248	4.50e-15	73.2
Msa0487440	MtrunA17_Chr5g0434531	24.370	238	159	5	10	238	1	226	1.93e-14	71.2
Msa0487440	MtrunA17_Chr6g0477591	39.683	63	38	0	81	143	2	64	1.09e-13	65.1
Msa0487440	MtrunA17_Chr8g0391511	22.624	221	163	3	21	240	23	236	2.23e-12	65.9
Msa0487440	MtrunA17_Chr5g0428601	31.655	139	82	5	125	257	1	132	6.16e-12	64.7
Msa0487440	MtrunA17_Chr8g0354321	56.098	41	18	0	206	246	25	65	4.59e-11	58.5
Msa0487440	MtrunA17_Chr4g0058891	25.000	260	167	10	8	255	10	253	4.81e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487440	AT4G05200.1	31.985	272	166	6	9	262	8	278	2.19e-42	153
Msa0487440	AT4G05200.2	31.985	272	166	6	9	262	26	296	2.51e-42	153
Msa0487440	AT3G22060.1	35.458	251	149	8	3	245	5	250	3.16e-42	145
Msa0487440	AT4G23180.3	35.111	225	136	6	25	244	34	253	1.38e-38	141
Msa0487440	AT4G23180.2	35.111	225	136	6	25	244	34	253	3.05e-38	141
Msa0487440	AT4G23180.1	35.111	225	136	6	25	244	34	253	5.95e-38	141
Msa0487440	AT3G58310.1	30.000	250	166	6	1	243	6	253	7.76e-36	129
Msa0487440	AT4G23160.1	34.553	246	151	5	22	261	37	278	9.78e-34	129
Msa0487440	AT4G23160.3	34.553	246	151	5	22	261	617	858	1.39e-33	129
Msa0487440	AT4G23160.2	34.553	246	151	5	22	261	617	858	1.39e-33	129
Msa0487440	AT4G20670.1	27.799	259	175	4	8	255	8	265	2.21e-32	120
Msa0487440	AT4G38830.1	30.870	230	148	5	23	244	19	245	4.59e-32	124
Msa0487440	AT4G23170.1	32.051	234	148	4	22	248	20	249	5.31e-32	119
Msa0487440	AT4G20640.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20630.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20580.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20600.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20620.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20610.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20590.1	28.112	249	167	4	8	245	8	255	5.56e-32	118
Msa0487440	AT4G20570.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT4G20560.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT4G20540.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT4G20645.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT4G20530.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT4G20550.1	28.340	247	165	4	8	243	22	267	8.41e-32	118
Msa0487440	AT3G21990.1	27.711	249	168	4	8	245	8	255	3.49e-31	116
Msa0487440	AT4G21410.2	29.961	257	168	6	10	257	7	260	6.08e-31	120
Msa0487440	AT4G21410.3	30.488	246	162	5	10	246	7	252	1.36e-30	120
Msa0487440	AT4G23280.3	34.000	250	150	8	18	258	17	260	1.42e-30	120
Msa0487440	AT4G23280.1	34.000	250	150	8	18	258	17	260	1.53e-30	120
Msa0487440	AT4G23280.2	33.200	250	152	8	18	258	17	260	1.54e-30	120
Msa0487440	AT1G61750.1	32.314	229	134	7	22	238	21	240	5.57e-29	112
Msa0487440	AT2G31620.1	31.897	232	142	7	23	243	26	252	6.82e-29	110
Msa0487440	AT4G21400.3	28.516	256	168	7	10	257	14	262	2.60e-28	113
Msa0487440	AT4G21400.6	28.745	247	164	6	10	248	14	256	3.15e-28	113
Msa0487440	AT4G21400.4	28.745	247	164	6	10	248	14	256	3.15e-28	113
Msa0487440	AT4G21400.5	28.745	247	164	6	10	248	14	256	3.15e-28	113
Msa0487440	AT4G21400.2	28.980	245	162	6	10	246	14	254	4.14e-28	113
Msa0487440	AT4G21400.1	28.980	245	162	6	10	246	14	254	4.24e-28	113
Msa0487440	AT5G48540.1	29.918	244	164	6	16	253	9	251	2.00e-27	106
Msa0487440	AT4G23310.1	31.780	236	150	7	25	255	136	365	2.20e-27	111
Msa0487440	AT4G23310.1	28.755	233	141	7	22	240	20	241	2.40e-17	82.0
Msa0487440	AT4G23310.2	31.780	236	150	7	25	255	136	365	2.73e-27	110
Msa0487440	AT4G23310.2	28.755	233	141	7	22	240	20	241	2.77e-17	81.6
Msa0487440	AT4G23150.1	31.624	234	149	4	22	248	20	249	1.88e-26	108
Msa0487440	AT4G23230.1	31.416	226	144	6	30	249	26	246	2.31e-26	108
Msa0487440	AT4G21400.7	30.052	193	123	5	64	246	38	228	6.13e-26	107
Msa0487440	AT4G23270.2	31.679	262	161	9	9	258	3	258	8.47e-26	106
Msa0487440	AT4G23270.1	31.679	262	161	9	9	258	3	258	8.47e-26	106
Msa0487440	AT3G21970.1	29.961	257	155	9	8	243	9	261	1.01e-25	102
Msa0487440	AT4G23270.3	31.679	262	161	9	9	258	3	258	1.06e-25	106
Msa0487440	AT3G21910.1	28.519	270	172	10	1	253	7	272	2.54e-25	101
Msa0487440	AT5G41290.1	28.085	235	156	5	16	241	14	244	3.18e-25	101
Msa0487440	AT3G21960.1	25.869	259	174	7	1	245	7	261	8.50e-25	99.8
Msa0487440	AT1G63550.1	28.571	217	147	4	28	238	29	243	3.20e-24	99.4
Msa0487440	AT4G23140.1	32.599	227	142	5	25	244	24	246	3.91e-24	101
Msa0487440	AT4G23140.2	32.599	227	142	5	25	244	24	246	4.05e-24	101
Msa0487440	AT4G23130.1	32.895	228	140	7	26	247	27	247	7.32e-24	100
Msa0487440	AT4G23130.2	32.895	228	140	7	26	247	27	247	7.56e-24	100
Msa0487440	AT4G23130.3	32.895	228	140	7	26	247	27	247	7.77e-24	100
Msa0487440	AT3G29050.2	26.429	280	174	8	1	253	6	280	1.39e-23	97.1
Msa0487440	AT5G41300.1	27.869	244	159	7	7	238	7	245	5.14e-23	95.5
Msa0487440	AT4G20680.1	25.271	277	172	8	1	252	7	273	4.05e-22	92.8
Msa0487440	AT3G21930.1	31.383	188	117	4	67	243	81	267	1.32e-21	91.7
Msa0487440	AT3G21940.1	29.675	246	146	8	21	245	35	274	1.49e-21	91.3
Msa0487440	AT3G21920.1	31.383	188	117	4	67	243	81	267	3.04e-21	90.5
Msa0487440	AT3G21920.2	31.383	188	117	4	67	243	103	289	3.50e-21	90.9
Msa0487440	AT3G22000.1	25.271	277	172	8	1	252	7	273	4.01e-21	90.1
Msa0487440	AT1G63580.1	26.400	250	155	7	4	239	3	237	5.44e-21	89.7
Msa0487440	AT3G21940.2	32.203	177	100	4	89	245	3	179	6.91e-21	87.4
Msa0487440	AT3G29040.1	27.843	255	158	9	9	243	4	252	1.41e-20	88.2
Msa0487440	AT3G22050.1	26.587	252	173	6	1	243	7	255	1.47e-20	88.2
Msa0487440	AT4G23240.1	28.440	218	146	6	47	255	41	257	1.79e-20	90.9
Msa0487440	AT1G63570.3	28.455	246	164	8	4	242	3	243	2.24e-20	88.2
Msa0487440	AT1G63570.1	28.455	246	164	8	4	242	3	243	2.24e-20	88.2
Msa0487440	AT1G63570.2	27.092	251	161	8	4	242	56	296	3.25e-20	88.6
Msa0487440	AT3G22040.1	27.143	210	140	7	45	245	51	256	3.64e-20	87.4
Msa0487440	AT3G21900.2	25.103	243	174	5	5	243	9	247	5.51e-20	86.7
Msa0487440	AT4G21230.1	29.032	217	137	7	46	254	46	253	1.23e-19	88.6
Msa0487440	AT4G23220.1	30.275	218	142	7	47	255	37	253	2.11e-19	87.8
Msa0487440	AT3G45860.1	30.374	214	136	6	42	248	44	251	2.70e-19	87.4
Msa0487440	AT4G11521.1	26.923	208	142	4	45	243	35	241	4.72e-19	84.3
Msa0487440	AT1G63590.1	27.602	221	137	6	34	239	32	244	6.83e-19	84.0
Msa0487440	AT5G41280.1	29.231	195	120	6	56	239	56	243	1.54e-18	83.2
Msa0487440	AT4G11480.2	24.806	258	177	6	7	257	6	253	2.67e-18	84.3
Msa0487440	AT3G60720.2	28.037	214	132	6	47	251	45	245	3.17e-18	81.6
Msa0487440	AT4G11480.4	24.806	258	177	6	7	257	6	253	3.72e-18	84.3
Msa0487440	AT1G63600.1	27.570	214	126	8	44	239	50	252	3.85e-18	82.8
Msa0487440	AT4G11480.3	24.806	258	177	6	7	257	6	253	4.46e-18	84.0
Msa0487440	AT4G11480.1	24.806	258	177	6	7	257	6	253	4.69e-18	84.0
Msa0487440	AT3G60720.3	27.962	211	130	6	47	248	45	242	9.42e-18	81.3
Msa0487440	AT4G11460.3	28.037	214	138	7	45	243	38	250	1.00e-17	82.8
Msa0487440	AT3G60720.1	27.962	211	130	6	47	248	45	242	1.05e-17	80.9
Msa0487440	AT4G11460.1	28.037	214	138	7	45	243	38	250	1.09e-17	82.8
Msa0487440	AT3G22010.1	25.926	216	133	7	45	243	55	260	1.28e-17	80.5
Msa0487440	AT4G11530.1	27.404	208	137	4	45	239	36	242	3.56e-17	81.3
Msa0487440	AT4G23210.1	29.439	214	135	7	45	243	38	250	6.85e-17	80.5
Msa0487440	AT4G23210.2	29.439	214	135	7	45	243	38	250	6.96e-17	80.5
Msa0487440	AT4G23210.4	29.439	214	135	7	45	243	38	250	6.96e-17	80.5
Msa0487440	AT4G23210.3	29.439	214	135	7	45	243	38	250	8.05e-17	80.1
Msa0487440	AT4G23210.5	29.439	214	135	7	45	243	38	250	8.67e-17	80.1
Msa0487440	AT4G04490.1	28.571	217	134	5	42	243	36	246	9.10e-17	80.1
Msa0487440	AT4G23300.1	26.923	234	148	6	45	259	38	267	1.01e-16	80.1
Msa0487440	AT5G37660.1	25.410	244	165	4	1	238	3	235	1.34e-16	78.2
Msa0487440	AT5G37660.2	25.410	244	165	4	1	238	3	235	1.42e-16	78.2
Msa0487440	AT1G70690.1	28.352	261	164	9	9	262	8	252	1.78e-16	77.8
Msa0487440	AT4G23200.2	26.471	238	157	7	35	257	24	258	3.02e-16	78.6
Msa0487440	AT4G23200.1	26.471	238	157	7	35	257	24	258	3.66e-16	78.2
Msa0487440	AT4G23290.2	28.125	224	140	8	47	255	41	258	1.22e-15	76.6
Msa0487440	AT3G21900.1	23.457	243	170	5	5	243	9	239	1.41e-15	74.7
Msa0487440	AT4G04570.1	26.582	237	159	7	35	257	30	265	5.08e-15	75.1
Msa0487440	AT4G04570.2	26.582	237	159	7	35	257	30	265	6.79e-15	74.3
Msa0487440	AT4G23250.1	26.667	255	160	8	10	244	9	256	2.18e-14	73.2
Msa0487440	AT4G23250.2	26.667	255	160	8	10	244	9	256	2.24e-14	73.2
Msa0487440	AT4G23250.2	26.066	211	134	7	47	255	741	931	1.70e-13	70.5
Msa0487440	AT4G23250.3	26.667	255	160	8	10	244	9	256	2.75e-14	72.8
Msa0487440	AT4G11470.1	24.775	222	154	5	35	244	26	246	4.77e-14	72.0
Msa0487440	AT4G11470.2	24.775	222	154	5	35	244	31	251	5.40e-14	72.0
Msa0487440	AT4G21410.1	29.921	127	84	3	125	246	1	127	7.19e-14	71.2
Msa0487440	AT4G11490.1	24.903	257	172	8	14	255	7	257	1.15e-13	70.9
Msa0487440	AT3G22020.2	28.662	157	88	5	84	225	55	202	2.14e-13	67.8
Msa0487440	AT3G22020.1	28.662	157	88	5	84	225	55	202	2.14e-13	67.8
Msa0487440	AT4G21400.8	29.457	129	82	4	125	246	1	127	2.55e-13	69.7
Msa0487440	AT2G01660.2	25.128	195	135	4	47	238	43	229	8.79e-13	67.0
Msa0487440	AT2G01660.3	25.128	195	135	4	47	238	43	229	1.07e-12	67.0
Msa0487440	AT2G01660.1	25.128	195	135	4	47	238	43	229	1.15e-12	67.0
Msa0487440	AT4G00970.2	25.893	224	152	7	44	258	57	275	2.26e-12	67.0
Msa0487440	AT4G11460.2	27.907	172	109	6	87	243	4	175	2.35e-12	67.0
Msa0487440	AT4G00970.1	25.893	224	152	7	44	258	57	275	2.81e-12	66.6
Msa0487440	AT4G23260.2	25.225	222	152	7	35	243	30	250	3.12e-12	66.6
Msa0487440	AT4G23190.1	27.830	212	139	7	45	243	38	248	3.30e-12	66.6
Msa0487440	AT4G23260.1	25.225	222	152	7	35	243	30	250	3.38e-12	66.6
Msa0487440	AT4G23190.2	28.302	212	138	7	45	243	38	248	4.80e-12	65.9
Msa0487440	AT3G21980.1	23.529	255	150	8	1	243	1	222	1.24e-11	63.2
Msa0487440	AT4G04540.3	25.764	229	151	9	45	255	39	266	1.45e-11	64.7
Msa0487440	AT4G04540.4	25.764	229	151	9	45	255	39	266	1.48e-11	64.7
Msa0487440	AT4G04540.1	25.764	229	151	9	45	255	39	266	1.53e-11	64.7
Msa0487440	AT4G04540.2	25.764	229	151	9	45	255	39	266	2.05e-11	64.3
Msa0487440	AT5G40380.1	27.059	170	112	6	76	244	79	237	6.51e-11	62.8
Msa0487440	AT5G40380.3	27.059	170	112	6	76	244	79	237	8.05e-11	62.4
Msa0487440	AT5G40380.2	27.059	170	112	6	76	244	79	237	8.96e-11	62.4

Find 51 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTCAAACCATAATTTCTT+TGG	0.178604	3_4:+6314059	Msa0487440:CDS
CCCCATTGCATACAACTTAT+TGG	0.202749	3_4:-6314201	None:intergenic
GATTACATTGTTTGTCATTA+AGG	0.244483	3_4:-6314277	None:intergenic
ATGGATTGGTGCAGTGTAAT+AGG	0.253549	3_4:+6314252	Msa0487440:CDS
TGAGGTTCCCAAAGAAATTA+TGG	0.272174	3_4:-6314067	None:intergenic
GCAATGAAAGGACTTTATTA+AGG	0.295900	3_4:-6313656	None:intergenic
CTTCCATACAAACCTGGATT+TGG	0.296960	3_4:-6314440	None:intergenic
ATGTTTGTCCCACAGCATTT+AGG	0.307727	3_4:-6314329	None:intergenic
ATAGAGCTTCAGCGGTAATA+TGG	0.329805	3_4:+6313844	Msa0487440:CDS
TTTAATAAGTGAAGCTACTT+TGG	0.335015	3_4:+6314175	Msa0487440:CDS
ATTACCGCTGAAGCTCTATT+AGG	0.359592	3_4:-6313840	None:intergenic
ATTCAAACCATAATTTCTTT+GGG	0.367276	3_4:+6314060	Msa0487440:CDS
ACCAATAAGTTGTATGCAAT+GGG	0.387145	3_4:+6314200	Msa0487440:CDS
TGAAAGGACTTTATTAAGGT+TGG	0.393193	3_4:-6313652	None:intergenic
CAATCATCACCTACATAATC+TGG	0.394451	3_4:-6313588	None:intergenic
AATACAGTTGATGCTGTCTA+TGG	0.398726	3_4:+6313732	Msa0487440:CDS
CAAACAATGTAATCAATGTT+TGG	0.403809	3_4:+6314286	Msa0487440:CDS
TTGCCAAATCCAGGTTTGTA+TGG	0.407425	3_4:+6314437	Msa0487440:CDS
TCATGAAGCTAAGAAATCTA+AGG	0.440409	3_4:-6313536	None:intergenic
TCTGCTCCTTTGCCAAATCC+AGG	0.449840	3_4:+6314428	Msa0487440:CDS
TGGATTGGTGCAGTGTAATA+GGG	0.457393	3_4:+6314253	Msa0487440:CDS
GGATATAATCACACAAGTAT+AGG	0.465096	3_4:+6313705	Msa0487440:CDS
GACCAATAAGTTGTATGCAA+TGG	0.469020	3_4:+6314199	Msa0487440:CDS
TGGGACAAACATTGGTTGGC+AGG	0.477603	3_4:+6314340	Msa0487440:CDS
GACCCCGGCATTTGCCATGA+TGG	0.485492	3_4:-6314098	None:intergenic
AAGTCCATCATGGCAAATGC+CGG	0.490942	3_4:+6314094	Msa0487440:CDS
AGTCCATCATGGCAAATGCC+GGG	0.495603	3_4:+6314095	Msa0487440:CDS
TCAGCTTTATCAAGTTCTTG+TGG	0.506622	3_4:-6314137	None:intergenic
TCATATTTCATCAAACAACT+TGG	0.509513	3_4:-6314371	None:intergenic
CAGAAGTTGCAGAAGTAAGT+TGG	0.514885	3_4:-6314409	None:intergenic
TGTAGCTGTAAGAGATTGTT+CGG	0.528498	3_4:-6313622	None:intergenic
AATTATCTTCCATACAAACC+TGG	0.545072	3_4:-6314446	None:intergenic
GAGATTGTTCGGTTGAGTTG+TGG	0.550536	3_4:-6313611	None:intergenic
GACAAAGTTCCTAAATGCTG+TGG	0.560237	3_4:+6314320	Msa0487440:CDS
ACCTCACAACAAGTCCATCA+TGG	0.579042	3_4:+6314084	Msa0487440:CDS
GCACAATCACCAGATTATGT+AGG	0.594913	3_4:+6313579	Msa0487440:CDS
CAATAAGTTGTATGCAATGG+GGG	0.596120	3_4:+6314202	Msa0487440:CDS
TACAAACCTGGATTTGGCAA+AGG	0.598161	3_4:-6314434	None:intergenic
GAAGCTAAGAAATCTAAGGA+TGG	0.601101	3_4:-6313532	None:intergenic
AAATGCTGTGGGACAAACAT+TGG	0.609717	3_4:+6314332	Msa0487440:CDS
ACAAAGTTCCTAAATGCTGT+GGG	0.612594	3_4:+6314321	Msa0487440:CDS
ACAATGTAATCAATGTTTGG+AGG	0.612800	3_4:+6314289	Msa0487440:CDS
TCTGATGCTATTGTAAGCAA+AGG	0.620402	3_4:+6313684	Msa0487440:CDS
GCCATGATGGACTTGTTGTG+AGG	0.620580	3_4:-6314085	None:intergenic
CTGTCCTAATAGAGCTTCAG+CGG	0.627849	3_4:+6313836	Msa0487440:CDS
CATCAGATGAGAGCAATGAA+AGG	0.631650	3_4:-6313668	None:intergenic
GCTGTGGGACAAACATTGGT+TGG	0.637363	3_4:+6314336	Msa0487440:CDS
ATAATCTGGTGATTGTGCAA+TGG	0.639968	3_4:-6313574	None:intergenic
TATGGTCTCTATGATTGTAG+AGG	0.653148	3_4:+6313750	Msa0487440:CDS
GTCCATCATGGCAAATGCCG+GGG	0.661685	3_4:+6314096	Msa0487440:CDS
CCAATAAGTTGTATGCAATG+GGG	0.687895	3_4:+6314201	Msa0487440:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTATATTAATGAAAAAATA+TGG	+	chr3_4:6313937-6313956	Msa0487440:intron	10.0%
!!	TGTATATTAATGAAAAAATA+TGG	+	chr3_4:6313937-6313956	Msa0487440:intron	10.0%
!!	TATTCAAACCATAATTTCTT+TGG	+	chr3_4:6314059-6314078	Msa0487440:CDS	20.0%
!!	ATTCAAACCATAATTTCTTT+GGG	+	chr3_4:6314060-6314079	Msa0487440:CDS	20.0%
!!	TATTCAAACCATAATTTCTT+TGG	+	chr3_4:6314059-6314078	Msa0487440:CDS	20.0%
!!	ATTCAAACCATAATTTCTTT+GGG	+	chr3_4:6314060-6314079	Msa0487440:CDS	20.0%
!	AATACCATATAAGATGTTGT+TGG	-	chr3_4:6313908-6313927	None:intergenic	25.0%
!	AAATATGGTCAAAGTATATC+TGG	+	chr3_4:6313952-6313971	Msa0487440:intron	25.0%
!	TTGTAAATATGTGTTTGAGT+AGG	+	chr3_4:6314036-6314055	Msa0487440:intron	25.0%
!	TTTAATAAGTGAAGCTACTT+TGG	+	chr3_4:6314175-6314194	Msa0487440:CDS	25.0%
!	GATTACATTGTTTGTCATTA+AGG	-	chr3_4:6314280-6314299	None:intergenic	25.0%
!	CAAACAATGTAATCAATGTT+TGG	+	chr3_4:6314286-6314305	Msa0487440:CDS	25.0%
!	TCATATTTCATCAAACAACT+TGG	-	chr3_4:6314374-6314393	None:intergenic	25.0%
!	AATACCATATAAGATGTTGT+TGG	-	chr3_4:6313908-6313927	None:intergenic	25.0%
!	AAATATGGTCAAAGTATATC+TGG	+	chr3_4:6313952-6313971	Msa0487440:intron	25.0%
!	TTGTAAATATGTGTTTGAGT+AGG	+	chr3_4:6314036-6314055	Msa0487440:intron	25.0%
!	TTTAATAAGTGAAGCTACTT+TGG	+	chr3_4:6314175-6314194	Msa0487440:CDS	25.0%
!	GATTACATTGTTTGTCATTA+AGG	-	chr3_4:6314280-6314299	None:intergenic	25.0%
!	CAAACAATGTAATCAATGTT+TGG	+	chr3_4:6314286-6314305	Msa0487440:CDS	25.0%
!	TCATATTTCATCAAACAACT+TGG	-	chr3_4:6314374-6314393	None:intergenic	25.0%
	TCATGAAGCTAAGAAATCTA+AGG	-	chr3_4:6313539-6313558	None:intergenic	30.0%
!!	TGCAATGGATTTTGTGAAAA+GGG	-	chr3_4:6313562-6313581	None:intergenic	30.0%
	TGAAAGGACTTTATTAAGGT+TGG	-	chr3_4:6313655-6313674	None:intergenic	30.0%
	GCAATGAAAGGACTTTATTA+AGG	-	chr3_4:6313659-6313678	None:intergenic	30.0%
	GGATATAATCACACAAGTAT+AGG	+	chr3_4:6313705-6313724	Msa0487440:CDS	30.0%
	GAATCCAACAACATCTTATA+TGG	+	chr3_4:6313901-6313920	Msa0487440:intron	30.0%
	CAATAGTGCATATTGTCAAA+TGG	+	chr3_4:6313976-6313995	Msa0487440:intron	30.0%
	ACCAATAAGTTGTATGCAAT+GGG	+	chr3_4:6314200-6314219	Msa0487440:CDS	30.0%
	TTGAGCAGTGAAAAAAGATA+TGG	+	chr3_4:6314233-6314252	Msa0487440:CDS	30.0%
	CAGTGAAAAAAGATATGGAT+TGG	+	chr3_4:6314238-6314257	Msa0487440:CDS	30.0%
	ACAATGTAATCAATGTTTGG+AGG	+	chr3_4:6314289-6314308	Msa0487440:CDS	30.0%
	TCATGAAGCTAAGAAATCTA+AGG	-	chr3_4:6313539-6313558	None:intergenic	30.0%
!!	TGCAATGGATTTTGTGAAAA+GGG	-	chr3_4:6313562-6313581	None:intergenic	30.0%
	TGAAAGGACTTTATTAAGGT+TGG	-	chr3_4:6313655-6313674	None:intergenic	30.0%
	GCAATGAAAGGACTTTATTA+AGG	-	chr3_4:6313659-6313678	None:intergenic	30.0%
	GGATATAATCACACAAGTAT+AGG	+	chr3_4:6313705-6313724	Msa0487440:CDS	30.0%
	GAATCCAACAACATCTTATA+TGG	+	chr3_4:6313901-6313920	Msa0487440:intron	30.0%
	CAATAGTGCATATTGTCAAA+TGG	+	chr3_4:6313976-6313995	Msa0487440:intron	30.0%
	ACCAATAAGTTGTATGCAAT+GGG	+	chr3_4:6314200-6314219	Msa0487440:CDS	30.0%
	TTGAGCAGTGAAAAAAGATA+TGG	+	chr3_4:6314233-6314252	Msa0487440:CDS	30.0%
	CAGTGAAAAAAGATATGGAT+TGG	+	chr3_4:6314238-6314257	Msa0487440:CDS	30.0%
	ACAATGTAATCAATGTTTGG+AGG	+	chr3_4:6314289-6314308	Msa0487440:CDS	30.0%
	GAAGCTAAGAAATCTAAGGA+TGG	-	chr3_4:6313535-6313554	None:intergenic	35.0%
!!	GTGCAATGGATTTTGTGAAA+AGG	-	chr3_4:6313563-6313582	None:intergenic	35.0%
	ATAATCTGGTGATTGTGCAA+TGG	-	chr3_4:6313577-6313596	None:intergenic	35.0%
	CAATCATCACCTACATAATC+TGG	-	chr3_4:6313591-6313610	None:intergenic	35.0%
	TGTAGCTGTAAGAGATTGTT+CGG	-	chr3_4:6313625-6313644	None:intergenic	35.0%
	TCTGATGCTATTGTAAGCAA+AGG	+	chr3_4:6313684-6313703	Msa0487440:CDS	35.0%
!	AATACAGTTGATGCTGTCTA+TGG	+	chr3_4:6313732-6313751	Msa0487440:CDS	35.0%
	TATGGTCTCTATGATTGTAG+AGG	+	chr3_4:6313750-6313769	Msa0487440:CDS	35.0%
!	GGTACAACTTTTGCATTTTC+AGG	+	chr3_4:6313865-6313884	Msa0487440:CDS	35.0%
	GTCATCTAATATGAGACAGA+GGG	+	chr3_4:6313998-6314017	Msa0487440:intron	35.0%
	TGAGGTTCCCAAAGAAATTA+TGG	-	chr3_4:6314070-6314089	None:intergenic	35.0%
!!!	TTAGTGATGTTTTTTGACCC+CGG	-	chr3_4:6314116-6314135	None:intergenic	35.0%
!	TCAGCTTTATCAAGTTCTTG+TGG	-	chr3_4:6314140-6314159	None:intergenic	35.0%
	GACCAATAAGTTGTATGCAA+TGG	+	chr3_4:6314199-6314218	Msa0487440:CDS	35.0%
	CCAATAAGTTGTATGCAATG+GGG	+	chr3_4:6314201-6314220	Msa0487440:CDS	35.0%
	CAATAAGTTGTATGCAATGG+GGG	+	chr3_4:6314202-6314221	Msa0487440:CDS	35.0%
	ACAAAGTTCCTAAATGCTGT+GGG	+	chr3_4:6314321-6314340	Msa0487440:CDS	35.0%
	GAAGCTAAGAAATCTAAGGA+TGG	-	chr3_4:6313535-6313554	None:intergenic	35.0%
!!	GTGCAATGGATTTTGTGAAA+AGG	-	chr3_4:6313563-6313582	None:intergenic	35.0%
	ATAATCTGGTGATTGTGCAA+TGG	-	chr3_4:6313577-6313596	None:intergenic	35.0%
	CAATCATCACCTACATAATC+TGG	-	chr3_4:6313591-6313610	None:intergenic	35.0%
	TGTAGCTGTAAGAGATTGTT+CGG	-	chr3_4:6313625-6313644	None:intergenic	35.0%
	TCTGATGCTATTGTAAGCAA+AGG	+	chr3_4:6313684-6313703	Msa0487440:CDS	35.0%
!	AATACAGTTGATGCTGTCTA+TGG	+	chr3_4:6313732-6313751	Msa0487440:CDS	35.0%
	TATGGTCTCTATGATTGTAG+AGG	+	chr3_4:6313750-6313769	Msa0487440:CDS	35.0%
!	GGTACAACTTTTGCATTTTC+AGG	+	chr3_4:6313865-6313884	Msa0487440:CDS	35.0%
	GTCATCTAATATGAGACAGA+GGG	+	chr3_4:6313998-6314017	Msa0487440:intron	35.0%
	TGAGGTTCCCAAAGAAATTA+TGG	-	chr3_4:6314070-6314089	None:intergenic	35.0%
!!!	TTAGTGATGTTTTTTGACCC+CGG	-	chr3_4:6314116-6314135	None:intergenic	35.0%
!	TCAGCTTTATCAAGTTCTTG+TGG	-	chr3_4:6314140-6314159	None:intergenic	35.0%
	GACCAATAAGTTGTATGCAA+TGG	+	chr3_4:6314199-6314218	Msa0487440:CDS	35.0%
	CCAATAAGTTGTATGCAATG+GGG	+	chr3_4:6314201-6314220	Msa0487440:CDS	35.0%
	CAATAAGTTGTATGCAATGG+GGG	+	chr3_4:6314202-6314221	Msa0487440:CDS	35.0%
	ACAAAGTTCCTAAATGCTGT+GGG	+	chr3_4:6314321-6314340	Msa0487440:CDS	35.0%
	GCACAATCACCAGATTATGT+AGG	+	chr3_4:6313579-6313598	Msa0487440:CDS	40.0%
	CATCAGATGAGAGCAATGAA+AGG	-	chr3_4:6313671-6313690	None:intergenic	40.0%
	ATTACCGCTGAAGCTCTATT+AGG	-	chr3_4:6313843-6313862	None:intergenic	40.0%
	ATAGAGCTTCAGCGGTAATA+TGG	+	chr3_4:6313844-6313863	Msa0487440:CDS	40.0%
	GGTCATCTAATATGAGACAG+AGG	+	chr3_4:6313997-6314016	Msa0487440:intron	40.0%
	CCCCATTGCATACAACTTAT+TGG	-	chr3_4:6314204-6314223	None:intergenic	40.0%
!!	ATGGATTGGTGCAGTGTAAT+AGG	+	chr3_4:6314252-6314271	Msa0487440:CDS	40.0%
!!	TGGATTGGTGCAGTGTAATA+GGG	+	chr3_4:6314253-6314272	Msa0487440:CDS	40.0%
	GACAAAGTTCCTAAATGCTG+TGG	+	chr3_4:6314320-6314339	Msa0487440:CDS	40.0%
	ATGTTTGTCCCACAGCATTT+AGG	-	chr3_4:6314332-6314351	None:intergenic	40.0%
	AAATGCTGTGGGACAAACAT+TGG	+	chr3_4:6314332-6314351	Msa0487440:CDS	40.0%
	CAGAAGTTGCAGAAGTAAGT+TGG	-	chr3_4:6314412-6314431	None:intergenic	40.0%
	TACAAACCTGGATTTGGCAA+AGG	-	chr3_4:6314437-6314456	None:intergenic	40.0%
	TTGCCAAATCCAGGTTTGTA+TGG	+	chr3_4:6314437-6314456	Msa0487440:CDS	40.0%
	CTTCCATACAAACCTGGATT+TGG	-	chr3_4:6314443-6314462	None:intergenic	40.0%
	GCACAATCACCAGATTATGT+AGG	+	chr3_4:6313579-6313598	Msa0487440:CDS	40.0%
	CATCAGATGAGAGCAATGAA+AGG	-	chr3_4:6313671-6313690	None:intergenic	40.0%
	ATTACCGCTGAAGCTCTATT+AGG	-	chr3_4:6313843-6313862	None:intergenic	40.0%
	ATAGAGCTTCAGCGGTAATA+TGG	+	chr3_4:6313844-6313863	Msa0487440:CDS	40.0%
	GGTCATCTAATATGAGACAG+AGG	+	chr3_4:6313997-6314016	Msa0487440:intron	40.0%
	CCCCATTGCATACAACTTAT+TGG	-	chr3_4:6314204-6314223	None:intergenic	40.0%
!!	ATGGATTGGTGCAGTGTAAT+AGG	+	chr3_4:6314252-6314271	Msa0487440:CDS	40.0%
!!	TGGATTGGTGCAGTGTAATA+GGG	+	chr3_4:6314253-6314272	Msa0487440:CDS	40.0%
	GACAAAGTTCCTAAATGCTG+TGG	+	chr3_4:6314320-6314339	Msa0487440:CDS	40.0%
	ATGTTTGTCCCACAGCATTT+AGG	-	chr3_4:6314332-6314351	None:intergenic	40.0%
	AAATGCTGTGGGACAAACAT+TGG	+	chr3_4:6314332-6314351	Msa0487440:CDS	40.0%
	CAGAAGTTGCAGAAGTAAGT+TGG	-	chr3_4:6314412-6314431	None:intergenic	40.0%
	TACAAACCTGGATTTGGCAA+AGG	-	chr3_4:6314437-6314456	None:intergenic	40.0%
	TTGCCAAATCCAGGTTTGTA+TGG	+	chr3_4:6314437-6314456	Msa0487440:CDS	40.0%
	CTTCCATACAAACCTGGATT+TGG	-	chr3_4:6314443-6314462	None:intergenic	40.0%
!	GAGATTGTTCGGTTGAGTTG+TGG	-	chr3_4:6313614-6313633	None:intergenic	45.0%
	CTGTCCTAATAGAGCTTCAG+CGG	+	chr3_4:6313836-6313855	Msa0487440:CDS	45.0%
	ACCTCACAACAAGTCCATCA+TGG	+	chr3_4:6314084-6314103	Msa0487440:CDS	45.0%
	AAGTCCATCATGGCAAATGC+CGG	+	chr3_4:6314094-6314113	Msa0487440:CDS	45.0%
!	GAGATTGTTCGGTTGAGTTG+TGG	-	chr3_4:6313614-6313633	None:intergenic	45.0%
	CTGTCCTAATAGAGCTTCAG+CGG	+	chr3_4:6313836-6313855	Msa0487440:CDS	45.0%
	ACCTCACAACAAGTCCATCA+TGG	+	chr3_4:6314084-6314103	Msa0487440:CDS	45.0%
	AAGTCCATCATGGCAAATGC+CGG	+	chr3_4:6314094-6314113	Msa0487440:CDS	45.0%
!!	GCCATGATGGACTTGTTGTG+AGG	-	chr3_4:6314088-6314107	None:intergenic	50.0%
	AGTCCATCATGGCAAATGCC+GGG	+	chr3_4:6314095-6314114	Msa0487440:CDS	50.0%
	GCTGTGGGACAAACATTGGT+TGG	+	chr3_4:6314336-6314355	Msa0487440:CDS	50.0%
!	TGGGACAAACATTGGTTGGC+AGG	+	chr3_4:6314340-6314359	Msa0487440:CDS	50.0%
	TCTGCTCCTTTGCCAAATCC+AGG	+	chr3_4:6314428-6314447	Msa0487440:CDS	50.0%
!!	GCCATGATGGACTTGTTGTG+AGG	-	chr3_4:6314088-6314107	None:intergenic	50.0%
	AGTCCATCATGGCAAATGCC+GGG	+	chr3_4:6314095-6314114	Msa0487440:CDS	50.0%
	GCTGTGGGACAAACATTGGT+TGG	+	chr3_4:6314336-6314355	Msa0487440:CDS	50.0%
!	TGGGACAAACATTGGTTGGC+AGG	+	chr3_4:6314340-6314359	Msa0487440:CDS	50.0%
	TCTGCTCCTTTGCCAAATCC+AGG	+	chr3_4:6314428-6314447	Msa0487440:CDS	50.0%
	GTCCATCATGGCAAATGCCG+GGG	+	chr3_4:6314096-6314115	Msa0487440:CDS	55.0%
	GTCCATCATGGCAAATGCCG+GGG	+	chr3_4:6314096-6314115	Msa0487440:CDS	55.0%
	GACCCCGGCATTTGCCATGA+TGG	-	chr3_4:6314101-6314120	None:intergenic	60.0%
	GACCCCGGCATTTGCCATGA+TGG	-	chr3_4:6314101-6314120	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	6313507	6314466	6313507	ID=Msa0487440;Name=Msa0487440
chr3_4	mRNA	6313507	6314466	6313507	ID=Msa0487440-mRNA-1;Parent=Msa0487440;Name=Msa0487440-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0\|1\|0\|1\|1\|1\|2\|0\|262
chr3_4	exon	6313507	6313886	6313507	ID=Msa0487440-mRNA-1:exon:2174;Parent=Msa0487440-mRNA-1
chr3_4	exon	6314058	6314466	6314058	ID=Msa0487440-mRNA-1:exon:2175;Parent=Msa0487440-mRNA-1
chr3_4	CDS	6313507	6313886	6313507	ID=Msa0487440-mRNA-1:cds;Parent=Msa0487440-mRNA-1
chr3_4	CDS	6314058	6314466	6314058	ID=Msa0487440-mRNA-1:cds;Parent=Msa0487440-mRNA-1

Gene Sequence

>Msa0487440

ATGGCAAAAAGACTCGTACTCATTTCCATCCTTAGATTTCTTAGCTTCATGACCCTTTTCACAAAATCCATTGCACAATCACCAGATTATGTAGGTGATGATTGCCACAACTCAACCGAACAATCTCTTACAGCTACATACAAATCCAACCTTAATAAAGTCCTTTCATTGCTCTCATCTGATGCTATTGTAAGCAAAGGATATAATCACACAAGTATAGGTGACAATACAGTTGATGCTGTCTATGGTCTCTATGATTGTAGAGGTGATGTCACTGCATCATTTTGTCAATTTTGTGTCTCTACTGCTACTTCAGATGTTCTTCAACGCTGTCCTAATAGAGCTTCAGCGGTAATATGGTACAACTTTTGCATTTTCAGGTATTCAAACCATAATTTCTTTGGGAACCTCACAACAAGTCCATCATGGCAAATGCCGGGGTCAAAAAACATCACTAATCCACAAGAACTTGATAAAGCTGAAGATAATATGCAAAGTTTAATAAGTGAAGCTACTTTGGAGACCAATAAGTTGTATGCAATGGGGGAGTTCAATTTGAGCAGTGAAAAAAGATATGGATTGGTGCAGTGTAATAGGGACCTTAATGACAAACAATGTAATCAATGTTTGGAGGCAATGTTAGACAAAGTTCCTAAATGCTGTGGGACAAACATTGGTTGGCAGGTTCATGCTCCAAGTTGTTTGATGAAATATGATGATTTTATGTTCTACCAACTTACTTCTGCAACTTCTGCTCCTTTGCCAAATCCAGGTTTGTATGGAAGATAA

Protein sequence

>Msa0487440

MAKRLVLISILRFLSFMTLFTKSIAQSPDYVGDDCHNSTEQSLTATYKSNLNKVLSLLSSDAIVSKGYNHTSIGDNTVDAVYGLYDCRGDVTASFCQFCVSTATSDVLQRCPNRASAVIWYNFCIFRYSNHNFFGNLTTSPSWQMPGSKNITNPQELDKAEDNMQSLISEATLETNKLYAMGEFNLSSEKRYGLVQCNRDLNDKQCNQCLEAMLDKVPKCCGTNIGWQVHAPSCLMKYDDFMFYQLTSATSAPLPNPGLYGR*