Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270520 | XP_024632151.1 | 67.337 | 199 | 21 | 4 | 1 | 196 | 28 | 185 | 1.17e-79 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270520 | sp|P25011|CCNB1_SOYBN | 29.268 | 246 | 112 | 9 | 9 | 195 | 20 | 262 | 4.44e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270520 | G7INA5 | 55.785 | 242 | 19 | 5 | 1 | 195 | 5 | 205 | 6.09e-72 | 230 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0270520 | 0.828730 | 7.644027e-55 | -8.615850e-47 |
| Msa0016570 | Msa0270520 | 0.854990 | 8.516306e-62 | -8.615850e-47 |
| Msa0016580 | Msa0270520 | 0.841074 | 5.921927e-58 | -8.615850e-47 |
| Msa0017070 | Msa0270520 | 0.807056 | 6.089311e-50 | -8.615850e-47 |
| Msa0047770 | Msa0270520 | 0.814681 | 1.361355e-51 | -8.615850e-47 |
| Msa0048100 | Msa0270520 | 0.803273 | 3.770980e-49 | -8.615850e-47 |
| Msa0064970 | Msa0270520 | 0.820464 | 6.764730e-53 | -8.615850e-47 |
| Msa0102070 | Msa0270520 | 0.848862 | 4.675069e-60 | -8.615850e-47 |
| Msa0107580 | Msa0270520 | 0.809048 | 2.294291e-50 | -8.615850e-47 |
| Msa0110270 | Msa0270520 | 0.846625 | 1.931680e-59 | -8.615850e-47 |
| Msa0111510 | Msa0270520 | 0.829534 | 4.877530e-55 | -8.615850e-47 |
| Msa0123810 | Msa0270520 | 0.847700 | 9.798936e-60 | -8.615850e-47 |
| Msa0124100 | Msa0270520 | 0.803979 | 2.692059e-49 | -8.615850e-47 |
| Msa0142220 | Msa0270520 | 0.860186 | 2.462363e-63 | -8.615850e-47 |
| Msa0145750 | Msa0270520 | 0.813330 | 2.702862e-51 | -8.615850e-47 |
| Msa0153910 | Msa0270520 | 0.853371 | 2.497117e-61 | -8.615850e-47 |
| Msa0188460 | Msa0270520 | 0.897318 | 1.579422e-76 | -8.615850e-47 |
| Msa0192970 | Msa0270520 | 0.805267 | 1.449713e-49 | -8.615850e-47 |
| Msa0197010 | Msa0270520 | 0.803382 | 3.580224e-49 | -8.615850e-47 |
| Msa0227480 | Msa0270520 | 0.831552 | 1.564346e-55 | -8.615850e-47 |
| Msa0231000 | Msa0270520 | 0.915179 | 8.004088e-85 | -8.615850e-47 |
| Msa0232850 | Msa0270520 | 0.855233 | 7.238719e-62 | -8.615850e-47 |
| Msa0233300 | Msa0270520 | 0.857498 | 1.566354e-62 | -8.615850e-47 |
| Msa0235140 | Msa0270520 | 0.843321 | 1.505210e-58 | -8.615850e-47 |
| Msa0251320 | Msa0270520 | 0.813297 | 2.748817e-51 | -8.615850e-47 |
| Msa0264450 | Msa0270520 | 0.803103 | 4.090087e-49 | -8.615850e-47 |
| Msa0267000 | Msa0270520 | 0.844572 | 6.956831e-59 | -8.615850e-47 |
| Msa0267010 | Msa0270520 | 0.856054 | 4.168024e-62 | -8.615850e-47 |
| Msa0270520 | Msa0288100 | 0.803516 | 3.358359e-49 | -8.615850e-47 |
| Msa0270520 | Msa0304170 | 0.814759 | 1.308305e-51 | -8.615850e-47 |
| Msa0270520 | Msa0305190 | 0.811619 | 6.394872e-51 | -8.615850e-47 |
| Msa0270520 | Msa0306460 | 0.848094 | 7.627462e-60 | -8.615850e-47 |
| Msa0270520 | Msa0309020 | 0.905283 | 5.056982e-80 | -8.615850e-47 |
| Msa0270520 | Msa0313760 | 0.854729 | 1.013994e-61 | -8.615850e-47 |
| Msa0270520 | Msa0337900 | 0.840979 | 6.275669e-58 | -8.615850e-47 |
| Msa0270520 | Msa0339620 | 0.803435 | 3.491363e-49 | -8.615850e-47 |
| Msa0270520 | Msa0342240 | 0.843190 | 1.632003e-58 | -8.615850e-47 |
| Msa0270520 | Msa0355220 | 0.809575 | 1.768651e-50 | -8.615850e-47 |
| Msa0270520 | Msa0360510 | 0.877922 | 4.258546e-69 | -8.615850e-47 |
| Msa0270520 | Msa0362420 | 0.814618 | 1.405970e-51 | -8.615850e-47 |
| Msa0270520 | Msa0365500 | 0.831656 | 1.475377e-55 | -8.615850e-47 |
| Msa0270520 | Msa0371730 | 0.824081 | 9.792922e-54 | -8.615850e-47 |
| Msa0270520 | Msa0378360 | 0.806549 | 7.794470e-50 | -8.615850e-47 |
| Msa0270520 | Msa0379940 | 0.815157 | 1.067626e-51 | -8.615850e-47 |
| Msa0270520 | Msa0384800 | 0.872761 | 2.480408e-67 | -8.615850e-47 |
| Msa0270520 | Msa0384890 | 0.838967 | 2.098809e-57 | -8.615850e-47 |
| Msa0270520 | Msa0386580 | 0.802151 | 6.427413e-49 | -8.615850e-47 |
| Msa0270520 | Msa0391180 | 0.813198 | 2.890549e-51 | -8.615850e-47 |
| Msa0270520 | Msa0394970 | 0.804932 | 1.703722e-49 | -8.615850e-47 |
| Msa0270520 | Msa0397210 | 0.801697 | 7.968745e-49 | -8.615850e-47 |
| Msa0270520 | Msa0397350 | 0.803962 | 2.713284e-49 | -8.615850e-47 |
| Msa0270520 | Msa0402290 | 0.816668 | 4.911348e-52 | -8.615850e-47 |
| Msa0270520 | Msa0406120 | 0.800440 | 1.439864e-48 | -8.615850e-47 |
| Msa0270520 | Msa0407750 | 0.811154 | 8.067873e-51 | -8.615850e-47 |
| Msa0270520 | Msa0408110 | 0.803285 | 3.750394e-49 | -8.615850e-47 |
| Msa0270520 | Msa0414410 | 0.860416 | 2.097073e-63 | -8.615850e-47 |
| Msa0270520 | Msa0414420 | 0.851925 | 6.459334e-61 | -8.615850e-47 |
| Msa0270520 | Msa0417080 | 0.810738 | 9.926226e-51 | -8.615850e-47 |
| Msa0270520 | Msa0423020 | 0.839102 | 1.937112e-57 | -8.615850e-47 |
| Msa0270520 | Msa0427710 | 0.810658 | 1.032942e-50 | -8.615850e-47 |
| Msa0270520 | Msa0428000 | 0.807357 | 5.257341e-50 | -8.615850e-47 |
| Msa0270520 | Msa0429880 | 0.800817 | 1.206400e-48 | -8.615850e-47 |
| Msa0270520 | Msa0430420 | 0.807169 | 5.763491e-50 | -8.615850e-47 |
| Msa0270520 | Msa0431690 | 0.822448 | 2.356252e-53 | -8.615850e-47 |
| Msa0270520 | Msa0432290 | 0.801226 | 9.951842e-49 | -8.615850e-47 |
| Msa0270520 | Msa0435230 | 0.820350 | 7.184293e-53 | -8.615850e-47 |
| Msa0270520 | Msa0436780 | 0.837451 | 5.157375e-57 | -8.615850e-47 |
| Msa0270520 | Msa0436800 | 0.833859 | 4.185835e-56 | -8.615850e-47 |
| Msa0270520 | Msa0438620 | 0.824576 | 7.488268e-54 | -8.615850e-47 |
| Msa0270520 | Msa0444130 | 0.835787 | 1.368979e-56 | -8.615850e-47 |
| Msa0270520 | Msa0450000 | 0.845047 | 5.182270e-59 | -8.615850e-47 |
| Msa0270520 | Msa0452900 | 0.850951 | 1.217632e-60 | -8.615850e-47 |
| Msa0270520 | Msa0453120 | 0.834306 | 3.235078e-56 | -8.615850e-47 |
| Msa0270520 | Msa0454910 | 0.825848 | 3.747516e-54 | -8.615850e-47 |
| Msa0270520 | Msa0459160 | 0.827452 | 1.552762e-54 | -8.615850e-47 |
| Msa0270520 | Msa0459170 | 0.831920 | 1.269410e-55 | -8.615850e-47 |
| Msa0270520 | Msa0466120 | 0.806727 | 7.146861e-50 | -8.615850e-47 |
| Msa0270520 | Msa0479340 | 0.832484 | 9.207189e-56 | -8.615850e-47 |
| Msa0270520 | Msa0486280 | 0.816489 | 5.386246e-52 | -8.615850e-47 |
| Msa0270520 | Msa0493000 | 0.803964 | 2.711289e-49 | -8.615850e-47 |
| Msa0270520 | Msa0502270 | 0.825235 | 5.234743e-54 | -8.615850e-47 |
| Msa0270520 | Msa0502760 | 0.818408 | 1.991084e-52 | -8.615850e-47 |
| Msa0270520 | Msa0503430 | 0.810779 | 9.725284e-51 | -8.615850e-47 |
| Msa0270520 | Msa0506270 | 0.833509 | 5.119326e-56 | -8.615850e-47 |
| Msa0270520 | Msa0518540 | 0.805256 | 1.457396e-49 | -8.615850e-47 |
| Msa0270520 | Msa0526580 | 0.815245 | 1.020534e-51 | -8.615850e-47 |
| Msa0270520 | Msa0534540 | 0.801468 | 8.875579e-49 | -8.615850e-47 |
| Msa0270520 | Msa0541130 | 0.805106 | 1.566335e-49 | -8.615850e-47 |
| Msa0270520 | Msa0564890 | 0.844559 | 7.011869e-59 | -8.615850e-47 |
| Msa0270520 | Msa0589780 | 0.802247 | 6.142759e-49 | -8.615850e-47 |
| Msa0270520 | Msa0592680 | 0.805369 | 1.379751e-49 | -8.615850e-47 |
| Msa0270520 | Msa0596150 | 0.806628 | 7.500964e-50 | -8.615850e-47 |
| Msa0270520 | Msa0598780 | 0.831625 | 1.501129e-55 | -8.615850e-47 |
| Msa0270520 | Msa0612930 | 0.808168 | 3.536398e-50 | -8.615850e-47 |
| Msa0270520 | Msa0636170 | 0.813882 | 2.043670e-51 | -8.615850e-47 |
| Msa0270520 | Msa0639610 | 0.843970 | 1.009430e-58 | -8.615850e-47 |
| Msa0270520 | Msa0657970 | 0.802689 | 4.978750e-49 | -8.615850e-47 |
| Msa0270520 | Msa0668260 | 0.804767 | 1.844634e-49 | -8.615850e-47 |
| Msa0270520 | Msa0678930 | 0.835847 | 1.322096e-56 | -8.615850e-47 |
| Msa0270520 | Msa0681250 | 0.808495 | 3.011881e-50 | -8.615850e-47 |
| Msa0270520 | Msa0681270 | 0.807694 | 4.460888e-50 | -8.615850e-47 |
| Msa0270520 | Msa0688270 | 0.805139 | 1.541964e-49 | -8.615850e-47 |
| Msa0270520 | Msa0694370 | 0.825622 | 4.240928e-54 | -8.615850e-47 |
| Msa0270520 | Msa0697060 | 0.821287 | 4.375780e-53 | -8.615850e-47 |
| Msa0270520 | Msa0725850 | 0.828380 | 9.282615e-55 | -8.615850e-47 |
| Msa0270520 | Msa0726140 | 0.857359 | 1.721953e-62 | -8.615850e-47 |
| Msa0270520 | Msa0729800 | 0.812757 | 3.609666e-51 | -8.615850e-47 |
| Msa0270520 | Msa0732710 | 0.801467 | 8.879937e-49 | -8.615850e-47 |
| Msa0270520 | Msa0733290 | 0.806874 | 6.653937e-50 | -8.615850e-47 |
| Msa0270520 | Msa0735080 | 0.823123 | 1.640443e-53 | -8.615850e-47 |
| Msa0270520 | Msa0741570 | 0.815779 | 7.760647e-52 | -8.615850e-47 |
| Msa0270520 | Msa0741990 | 0.814410 | 1.562648e-51 | -8.615850e-47 |
| Msa0270520 | Msa0743810 | 0.873784 | 1.123777e-67 | -8.615850e-47 |
| Msa0270520 | Msa0745060 | 0.842824 | 2.041830e-58 | -8.615850e-47 |
| Msa0270520 | Msa0762360 | 0.803180 | 3.943006e-49 | -8.615850e-47 |
| Msa0270520 | Msa0763440 | 0.814502 | 1.490949e-51 | -8.615850e-47 |
| Msa0270520 | Msa0764960 | 0.809700 | 1.662289e-50 | -8.615850e-47 |
| Msa0270520 | Msa0766630 | 0.841085 | 5.883793e-58 | -8.615850e-47 |
| Msa0270520 | Msa0767720 | 0.863275 | 2.796300e-64 | -8.615850e-47 |
| Msa0270520 | Msa0768370 | 0.801151 | 1.030763e-48 | -8.615850e-47 |
| Msa0270520 | Msa0775300 | 0.826548 | 2.554372e-54 | -8.615850e-47 |
| Msa0270520 | Msa0777870 | 0.805943 | 1.045719e-49 | -8.615850e-47 |
| Msa0270520 | Msa0783160 | 0.868686 | 5.429254e-66 | -8.615850e-47 |
| Msa0270520 | Msa0784290 | 0.822944 | 1.806249e-53 | -8.615850e-47 |
| Msa0270520 | Msa0787600 | 0.837961 | 3.816662e-57 | -8.615850e-47 |
| Msa0270520 | Msa0789250 | 0.840780 | 7.076849e-58 | -8.615850e-47 |
| Msa0270520 | Msa0802830 | 0.803080 | 4.134883e-49 | -8.615850e-47 |
| Msa0270520 | Msa0806090 | 0.812262 | 4.631345e-51 | -8.615850e-47 |
| Msa0270520 | Msa0808010 | 0.824197 | 9.196092e-54 | -8.615850e-47 |
| Msa0270520 | Msa0808020 | 0.819657 | 1.035354e-52 | -8.615850e-47 |
| Msa0270520 | Msa0810540 | 0.807917 | 3.999751e-50 | -8.615850e-47 |
| Msa0270520 | Msa0811080 | 0.838248 | 3.219750e-57 | -8.615850e-47 |
| Msa0270520 | Msa0811270 | 0.811073 | 8.399207e-51 | -8.615850e-47 |
| Msa0270520 | Msa0813400 | 0.825910 | 3.622798e-54 | -8.615850e-47 |
| Msa0270520 | Msa0820850 | 0.810836 | 9.454016e-51 | -8.615850e-47 |
| Msa0270520 | Msa0822650 | 0.809699 | 1.663389e-50 | -8.615850e-47 |
| Msa0270520 | Msa0825860 | 0.842079 | 3.218221e-58 | -8.615850e-47 |
| Msa0270520 | Msa0833290 | 0.831969 | 1.235059e-55 | -8.615850e-47 |
| Msa0270520 | Msa0833300 | 0.800112 | 1.679046e-48 | -8.615850e-47 |
| Msa0270520 | Msa0843260 | 0.813003 | 3.189219e-51 | -8.615850e-47 |
| Msa0270520 | Msa0845930 | 0.813846 | 2.081470e-51 | -8.615850e-47 |
| Msa0270520 | Msa0846210 | 0.863375 | 2.604367e-64 | -8.615850e-47 |
| Msa0270520 | Msa0846330 | 0.820377 | 7.083700e-53 | -8.615850e-47 |
| Msa0270520 | Msa0846350 | 0.842903 | 1.945426e-58 | -8.615850e-47 |
| Msa0270520 | Msa0848060 | 0.811515 | 6.736285e-51 | -8.615850e-47 |
| Msa0270520 | Msa0854980 | 0.822946 | 1.804835e-53 | -8.615850e-47 |
| Msa0270520 | Msa0858980 | 0.830800 | 2.395197e-55 | -8.615850e-47 |
| Msa0270520 | Msa0861130 | 0.808726 | 2.687533e-50 | -8.615850e-47 |
| Msa0270520 | Msa0865320 | 0.823964 | 1.042910e-53 | -8.615850e-47 |
| Msa0270520 | Msa0885280 | 0.878795 | 2.103206e-69 | -8.615850e-47 |
| Msa0270520 | Msa0885290 | 0.879073 | 1.677946e-69 | -8.615850e-47 |
| Msa0270520 | Msa0887920 | 0.814133 | 1.799214e-51 | -8.615850e-47 |
| Msa0270520 | Msa0888370 | 0.810609 | 1.058818e-50 | -8.615850e-47 |
| Msa0270520 | Msa0889850 | 0.827264 | 1.722278e-54 | -8.615850e-47 |
| Msa0270520 | Msa0896080 | 0.805195 | 1.500717e-49 | -8.615850e-47 |
| Msa0270520 | Msa0897880 | 0.801750 | 7.768943e-49 | -8.615850e-47 |
| Msa0270520 | Msa0898380 | 0.826155 | 3.167191e-54 | -8.615850e-47 |
| Msa0270520 | Msa0899450 | 0.811384 | 7.192078e-51 | -8.615850e-47 |
| Msa0270520 | Msa0907260 | 0.857411 | 1.662650e-62 | -8.615850e-47 |
| Msa0270520 | Msa0922720 | 0.811324 | 7.411241e-51 | -8.615850e-47 |
| Msa0270520 | Msa0925290 | 0.801727 | 7.854311e-49 | -8.615850e-47 |
| Msa0270520 | Msa0927290 | 0.804787 | 1.827115e-49 | -8.615850e-47 |
| Msa0270520 | Msa0930390 | 0.805693 | 1.180271e-49 | -8.615850e-47 |
| Msa0270520 | Msa0935910 | 0.821807 | 3.317485e-53 | -8.615850e-47 |
| Msa0270520 | Msa0954020 | 0.828718 | 7.692006e-55 | -8.615850e-47 |
| Msa0270520 | Msa0954910 | 0.877709 | 5.055317e-69 | -8.615850e-47 |
| Msa0270520 | Msa0956270 | 0.842180 | 3.026578e-58 | -8.615850e-47 |
| Msa0270520 | Msa0964220 | 0.802460 | 5.552255e-49 | -8.615850e-47 |
| Msa0270520 | Msa0976670 | 0.811565 | 6.568402e-51 | -8.615850e-47 |
| Msa0270520 | Msa0979410 | 0.811144 | 8.108268e-51 | -8.615850e-47 |
| Msa0270520 | Msa0981370 | 0.823587 | 1.278274e-53 | -8.615850e-47 |
| Msa0270520 | Msa0986360 | 0.800765 | 1.236115e-48 | -8.615850e-47 |
| Msa0270520 | Msa0989060 | 0.875781 | 2.351100e-68 | -8.615850e-47 |
| Msa0270520 | Msa0998690 | 0.828122 | 1.071189e-54 | -8.615850e-47 |
| Msa0270520 | Msa1002310 | 0.819363 | 1.207743e-52 | -8.615850e-47 |
| Msa0270520 | Msa1014540 | 0.836094 | 1.144450e-56 | -8.615850e-47 |
| Msa0270520 | Msa1014990 | 0.811477 | 6.865091e-51 | -8.615850e-47 |
| Msa0270520 | Msa1016280 | 0.828735 | 7.621240e-55 | -8.615850e-47 |
| Msa0270520 | Msa1023010 | 0.825620 | 4.244144e-54 | -8.615850e-47 |
| Msa0270520 | Msa1024240 | 0.812215 | 4.742668e-51 | -8.615850e-47 |
| Msa0270520 | Msa1025360 | 0.847438 | 1.156171e-59 | -8.615850e-47 |
| Msa0270520 | Msa1025370 | 0.836299 | 1.015053e-56 | -8.615850e-47 |
| Msa0270520 | Msa1029240 | 0.804435 | 2.163702e-49 | -8.615850e-47 |
| Msa0270520 | Msa1043410 | 0.806578 | 7.685253e-50 | -8.615850e-47 |
| Msa0270520 | Msa1044830 | 0.836307 | 1.010615e-56 | -8.615850e-47 |
| Msa0270520 | Msa1044840 | 0.849495 | 3.117899e-60 | -8.615850e-47 |
| Msa0270520 | Msa1052500 | 0.800556 | 1.363443e-48 | -8.615850e-47 |
| Msa0270520 | Msa1057920 | 0.808142 | 3.581299e-50 | -8.615850e-47 |
| Msa0270520 | Msa1065570 | 0.804782 | 1.830713e-49 | -8.615850e-47 |
| Msa0270520 | Msa1075220 | -0.802198 | 6.287547e-49 | -8.615850e-47 |
| Msa0270520 | Msa1075650 | 0.801058 | 1.076826e-48 | -8.615850e-47 |
| Msa0270520 | Msa1092990 | 0.858705 | 6.856957e-63 | -8.615850e-47 |
| Msa0270520 | Msa1099970 | 0.828749 | 7.563595e-55 | -8.615850e-47 |
| Msa0270520 | Msa1100980 | 0.872721 | 2.558388e-67 | -8.615850e-47 |
| Msa0270520 | Msa1109440 | 0.836410 | 9.513426e-57 | -8.615850e-47 |
| Msa0270520 | Msa1114030 | 0.809414 | 1.914288e-50 | -8.615850e-47 |
| Msa0270520 | Msa1116260 | 0.812959 | 3.260760e-51 | -8.615850e-47 |
| Msa0270520 | Msa1121200 | 0.822557 | 2.222896e-53 | -8.615850e-47 |
| Msa0270520 | Msa1121490 | 0.800002 | 1.767480e-48 | -8.615850e-47 |
| Msa0270520 | Msa1135740 | 0.850615 | 1.514533e-60 | -8.615850e-47 |
| Msa0270520 | Msa1136090 | 0.876217 | 1.664388e-68 | -8.615850e-47 |
| Msa0270520 | Msa1137690 | 0.809382 | 1.945175e-50 | -8.615850e-47 |
| Msa0270520 | Msa1146110 | 0.834729 | 2.532943e-56 | -8.615850e-47 |
| Msa0270520 | Msa1148020 | 0.806504 | 7.968232e-50 | -8.615850e-47 |
| Msa0270520 | Msa1149360 | 0.800875 | 1.173828e-48 | -8.615850e-47 |
| Msa0270520 | Msa1160670 | 0.848099 | 7.603873e-60 | -8.615850e-47 |
| Msa0270520 | Msa1162550 | -0.805954 | 1.040397e-49 | -8.615850e-47 |
| Msa0270520 | Msa1173920 | 0.829640 | 4.596672e-55 | -8.615850e-47 |
| Msa0270520 | Msa1174040 | 0.813272 | 2.783145e-51 | -8.615850e-47 |
| Msa0270520 | Msa1182090 | 0.821535 | 3.834298e-53 | -8.615850e-47 |
| Msa0270520 | Msa1184420 | 0.802218 | 6.226090e-49 | -8.615850e-47 |
| Msa0270520 | Msa1187940 | 0.846790 | 1.740940e-59 | -8.615850e-47 |
| Msa0270520 | Msa1187950 | 0.866475 | 2.774821e-65 | -8.615850e-47 |
| Msa0270520 | Msa1192640 | 0.867532 | 1.276545e-65 | -8.615850e-47 |
| Msa0270520 | Msa1195190 | 0.830012 | 3.732595e-55 | -8.615850e-47 |
| Msa0270520 | Msa1211030 | 0.804665 | 1.937254e-49 | -8.615850e-47 |
| Msa0270520 | Msa1228590 | 0.807166 | 5.771750e-50 | -8.615850e-47 |
| Msa0270520 | Msa1230430 | 0.827248 | 1.736938e-54 | -8.615850e-47 |
| Msa0270520 | Msa1246880 | 0.818520 | 1.878503e-52 | -8.615850e-47 |
| Msa0270520 | Msa1249490 | 0.824169 | 9.337955e-54 | -8.615850e-47 |
| Msa0270520 | Msa1253000 | 0.806376 | 8.476894e-50 | -8.615850e-47 |
| Msa0270520 | Msa1269670 | 0.837706 | 4.437135e-57 | -8.615850e-47 |
| Msa0270520 | Msa1270230 | 0.856270 | 3.603587e-62 | -8.615850e-47 |
| Msa0270520 | Msa1270240 | 0.858518 | 7.799891e-63 | -8.615850e-47 |
| Msa0270520 | Msa1270270 | 0.829142 | 6.073252e-55 | -8.615850e-47 |
| Msa0270520 | Msa1273230 | 0.842403 | 2.641272e-58 | -8.615850e-47 |
| Msa0270520 | Msa1281860 | 0.806001 | 1.016754e-49 | -8.615850e-47 |
| Msa0270520 | Msa1283330 | 0.873707 | 1.193885e-67 | -8.615850e-47 |
| Msa0270520 | Msa1284680 | 0.827847 | 1.247809e-54 | -8.615850e-47 |
| Msa0270520 | Msa1285930 | 0.887273 | 1.649548e-72 | -8.615850e-47 |
| Msa0270520 | Msa1287800 | 0.851273 | 9.881469e-61 | -8.615850e-47 |
| Msa0270520 | Msa1287810 | 0.859971 | 2.858251e-63 | -8.615850e-47 |
| Msa0270520 | Msa1287820 | 0.815027 | 1.140658e-51 | -8.615850e-47 |
| Msa0270520 | Msa1289430 | 0.831594 | 1.528137e-55 | -8.615850e-47 |
| Msa0270520 | Msa1297210 | 0.824646 | 7.211302e-54 | -8.615850e-47 |
| Msa0270520 | Msa1298260 | 0.801038 | 1.087282e-48 | -8.615850e-47 |
| Msa0270520 | Msa1307890 | 0.828778 | 7.439515e-55 | -8.615850e-47 |
| Msa0270520 | Msa1310120 | 0.806106 | 9.664649e-50 | -8.615850e-47 |
| Msa0270520 | Msa1320300 | 0.809200 | 2.128620e-50 | -8.615850e-47 |
| Msa0270520 | Msa1342200 | 0.813619 | 2.334940e-51 | -8.615850e-47 |
| Msa0270520 | Msa1344520 | 0.825168 | 5.430307e-54 | -8.615850e-47 |
| Msa0270520 | Msa1345920 | 0.804738 | 1.870080e-49 | -8.615850e-47 |
| Msa0270520 | Msa1369430 | 0.809387 | 1.940438e-50 | -8.615850e-47 |
| Msa0270520 | Msa1382690 | 0.824096 | 9.712731e-54 | -8.615850e-47 |
| Msa0270520 | Msa1382700 | 0.811717 | 6.088595e-51 | -8.615850e-47 |
| Msa0270520 | Msa1386330 | 0.801182 | 1.015840e-48 | -8.615850e-47 |
| Msa0270520 | Msa1397610 | 0.807283 | 5.451306e-50 | -8.615850e-47 |
| Msa0270520 | Msa1397860 | 0.802836 | 4.642821e-49 | -8.615850e-47 |
| Msa0270520 | Msa1402790 | 0.857437 | 1.633480e-62 | -8.615850e-47 |
| Msa0270520 | Msa1404000 | 0.855438 | 6.308532e-62 | -8.615850e-47 |
| Msa0270520 | Msa1408780 | 0.803252 | 3.809006e-49 | -8.615850e-47 |
| Msa0270520 | Msa1411020 | 0.805713 | 1.169024e-49 | -8.615850e-47 |
| Msa0270520 | Msa1415310 | 0.823435 | 1.387376e-53 | -8.615850e-47 |
| Msa0270520 | Msa1422180 | 0.838935 | 2.140068e-57 | -8.615850e-47 |
| Msa0270520 | Msa1423390 | 0.800044 | 1.733554e-48 | -8.615850e-47 |
| Msa0270520 | Msa1424290 | 0.803700 | 3.076520e-49 | -8.615850e-47 |
| Msa0270520 | Msa1427230 | 0.806349 | 8.587871e-50 | -8.615850e-47 |
| Msa0270520 | Msa1433120 | 0.841277 | 5.237584e-58 | -8.615850e-47 |
| Msa0270520 | Msa1434350 | 0.804888 | 1.739843e-49 | -8.615850e-47 |
| Msa0270520 | Msa1439320 | 0.805740 | 1.153540e-49 | -8.615850e-47 |
| Msa0270520 | Msa1451570 | 0.824075 | 9.825290e-54 | -8.615850e-47 |
| Msa0270520 | Msa1451620 | -0.802896 | 4.513890e-49 | -8.615850e-47 |
| Msa0270520 | Msa1460830 | 0.805725 | 1.161792e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270520 | MtrunA17_Chr2g0277271 | 56.044 | 91 | 4 | 2 | 105 | 195 | 11 | 65 | 1.02e-21 | 87.0 |
| Msa0270520 | MtrunA17_Chr7g0255771 | 48.235 | 85 | 37 | 3 | 114 | 193 | 183 | 265 | 7.62e-15 | 73.9 |
| Msa0270520 | MtrunA17_Chr7g0255771 | 42.667 | 75 | 43 | 0 | 194 | 268 | 381 | 455 | 1.55e-14 | 73.2 |
| Msa0270520 | MtrunA17_Chr5g0441371 | 38.667 | 75 | 46 | 0 | 194 | 268 | 343 | 417 | 1.74e-13 | 69.7 |
| Msa0270520 | MtrunA17_Chr5g0441371 | 40.426 | 94 | 48 | 3 | 109 | 197 | 144 | 234 | 2.72e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270520 | AT4G37490.1 | 31.455 | 213 | 116 | 7 | 9 | 193 | 21 | 231 | 7.52e-15 | 74.3 |
| Msa0270520 | AT2G26760.1 | 47.674 | 86 | 38 | 3 | 114 | 194 | 114 | 197 | 1.29e-14 | 73.6 |
| Msa0270520 | AT3G11520.1 | 28.241 | 216 | 116 | 7 | 11 | 195 | 20 | 227 | 4.71e-13 | 68.9 |
| Msa0270520 | AT3G11520.2 | 28.241 | 216 | 116 | 7 | 11 | 195 | 20 | 227 | 6.94e-13 | 68.6 |
| Msa0270520 | AT5G06150.1 | 29.279 | 222 | 108 | 9 | 17 | 193 | 31 | 248 | 1.36e-12 | 67.8 |
| Msa0270520 | AT5G06150.2 | 29.279 | 222 | 108 | 9 | 17 | 193 | 31 | 248 | 1.38e-12 | 67.4 |
| Msa0270520 | AT1G34460.9 | 31.980 | 197 | 105 | 9 | 19 | 191 | 131 | 322 | 4.26e-12 | 66.2 |
| Msa0270520 | AT1G34460.6 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.33e-12 | 66.2 |
| Msa0270520 | AT1G34460.3 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.33e-12 | 66.2 |
| Msa0270520 | AT1G34460.8 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.33e-12 | 66.2 |
| Msa0270520 | AT1G34460.1 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.33e-12 | 66.2 |
| Msa0270520 | AT1G76310.3 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 4.47e-12 | 66.2 |
| Msa0270520 | AT1G34460.7 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.51e-12 | 66.2 |
| Msa0270520 | AT1G34460.5 | 31.980 | 197 | 105 | 9 | 19 | 191 | 145 | 336 | 4.97e-12 | 66.2 |
| Msa0270520 | AT1G76310.1 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 5.34e-12 | 65.9 |
| Msa0270520 | AT1G76310.4 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 6.03e-12 | 65.5 |
| Msa0270520 | AT1G76310.2 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 7.36e-12 | 65.5 |
| Msa0270520 | AT1G34460.2 | 31.313 | 198 | 102 | 9 | 19 | 191 | 145 | 333 | 8.35e-12 | 65.5 |
| Msa0270520 | AT1G34460.4 | 31.313 | 198 | 102 | 9 | 19 | 191 | 145 | 333 | 8.35e-12 | 65.5 |
Find 54 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGATGCTATTAATAATT+TGG | 0.165741 | 2_3:-1730923 | Msa0270520:CDS |
| TTAGCTGGCACTTCTAATTC+TGG | 0.308253 | 2_3:+1731666 | None:intergenic |
| TATGCTTTCATGTTTCTTGC+AGG | 0.333887 | 2_3:-1732026 | None:intergenic |
| CAATATCTGCAGAACCTATC+TGG | 0.343173 | 2_3:-1729747 | Msa0270520:CDS |
| ATGCTCGTTCTATACTCAAT+AGG | 0.349417 | 2_3:-1729785 | Msa0270520:CDS |
| TCTGCAATTCAAGACGATAA+TGG | 0.378719 | 2_3:+1730680 | None:intergenic |
| TACTCAATAGGGTTCCATAT+TGG | 0.384695 | 2_3:-1729773 | Msa0270520:CDS |
| GTTCTTTGCAGTAGCCAGAT+AGG | 0.397989 | 2_3:+1729733 | None:intergenic |
| AGAGGTGGCCATCAAGTTCT+TGG | 0.398498 | 2_3:-1731975 | Msa0270520:CDS |
| TGCAGATATTGAGTCCAATA+TGG | 0.414124 | 2_3:+1729759 | None:intergenic |
| CGATATCTCCAAGAACTTGA+TGG | 0.417687 | 2_3:+1731967 | None:intergenic |
| TTTCTTGCAGGGAGAGATAA+GGG | 0.418838 | 2_3:-1732014 | Msa0270520:CDS |
| ATGTCAACAGTCTGATCCTT+GGG | 0.430682 | 2_3:+1731339 | None:intergenic |
| ATGTCAACATCATGATTCTC+TGG | 0.433621 | 2_3:+1730952 | None:intergenic |
| AGATGATGCTATTAATAATA+TGG | 0.435281 | 2_3:-1731310 | Msa0270520:CDS |
| TGCTCGTTCTATACTCAATA+GGG | 0.441679 | 2_3:-1729784 | Msa0270520:CDS |
| CATCAAGTTCTTGGAGATAT+CGG | 0.449503 | 2_3:-1731966 | Msa0270520:CDS |
| GCACTTCTAATTCTGGTACC+AGG | 0.460854 | 2_3:+1731673 | None:intergenic |
| CATGTCAACAGTCTGATCCT+TGG | 0.464984 | 2_3:+1731338 | None:intergenic |
| GGAGATATCGGTAATCTTGA+GGG | 0.474467 | 2_3:-1731954 | Msa0270520:CDS |
| CCTTGGGCTCGAACAAGAGC+TGG | 0.474510 | 2_3:+1731355 | None:intergenic |
| AGGAAATCAAAATGTGTATG+AGG | 0.481586 | 2_3:-1730732 | Msa0270520:CDS |
| GTTTCTTGCAGGGAGAGATA+AGG | 0.481740 | 2_3:-1732015 | Msa0270520:CDS |
| CCAGCTCTTGTTCGAGCCCA+AGG | 0.497089 | 2_3:-1731355 | Msa0270520:CDS |
| TCCTCTTCGTTTGCAGACCC+TGG | 0.504181 | 2_3:-1731691 | Msa0270520:CDS |
| CACTTCTAATTCTGGTACCA+GGG | 0.504441 | 2_3:+1731674 | None:intergenic |
| GTGTATGAGGATTATTATTG+TGG | 0.508172 | 2_3:-1730719 | Msa0270520:CDS |
| CTGGCTCAAATGTCAAGATC+CGG | 0.512046 | 2_3:+1730971 | None:intergenic |
| AGAGCAATATGACCTTTCTC+AGG | 0.515131 | 2_3:+1729522 | None:intergenic |
| TGGAGATATCGGTAATCTTG+AGG | 0.517970 | 2_3:-1731955 | Msa0270520:CDS |
| GATTATTATTGTGGAATGGT+TGG | 0.523494 | 2_3:-1730710 | Msa0270520:CDS |
| ATGCTTTCATGTTTCTTGCA+GGG | 0.525196 | 2_3:-1732025 | None:intergenic |
| CAAGGATCAGACTGTTGACA+TGG | 0.539460 | 2_3:-1731337 | Msa0270520:CDS |
| AAAATTACAGAACCTTGTGA+TGG | 0.541379 | 2_3:+1731914 | None:intergenic |
| ACGCCTTGGTCATAATTAGC+TGG | 0.543546 | 2_3:+1731651 | None:intergenic |
| GAATCAAGTTTCAGACTACA+TGG | 0.549031 | 2_3:-1730764 | Msa0270520:CDS |
| TGAATCAGGTTTGAAATGAA+TGG | 0.554219 | 2_3:-1731714 | Msa0270520:intron |
| AAATTCTCAAGTCCTGAGAA+AGG | 0.562056 | 2_3:-1729534 | Msa0270520:CDS |
| CAGATACTGCGCCACACAGT+TGG | 0.564634 | 2_3:-1729607 | Msa0270520:CDS |
| TGAGGATTATTATTGTGGAA+TGG | 0.566827 | 2_3:-1730714 | Msa0270520:CDS |
| GATTCTTTAGTACAACGCCT+TGG | 0.584480 | 2_3:+1731637 | None:intergenic |
| GAGAGATAAGGGAAAGCAGA+AGG | 0.586551 | 2_3:-1732003 | Msa0270520:CDS |
| GGAAAGCAGAAGGCAGAAAG+AGG | 0.589384 | 2_3:-1731993 | Msa0270520:CDS |
| AAGCAGAAGGCAGAAAGAGG+TGG | 0.604430 | 2_3:-1731990 | Msa0270520:CDS |
| AGACTACATGGAATCACAGA+AGG | 0.610858 | 2_3:-1730752 | Msa0270520:CDS |
| AAATTACAGAACCTTGTGAT+GGG | 0.613242 | 2_3:+1731915 | None:intergenic |
| TAGGTATACTAGTCAAGGAG+AGG | 0.620371 | 2_3:+1730611 | None:intergenic |
| GAGATATCGGTAATCTTGAG+GGG | 0.639049 | 2_3:-1731953 | Msa0270520:CDS |
| AGATTTCACGACCCATCACA+AGG | 0.642914 | 2_3:-1731926 | Msa0270520:intron |
| AGAGAATCATGATGTTGACA+TGG | 0.645414 | 2_3:-1730950 | Msa0270520:CDS |
| ACCAGGGTCTGCAAACGAAG+AGG | 0.649187 | 2_3:+1731690 | None:intergenic |
| AAGGATCAGACTGTTGACAT+GGG | 0.656300 | 2_3:-1731336 | Msa0270520:CDS |
| GTGCCAGCTAATTATGACCA+AGG | 0.665369 | 2_3:-1731654 | Msa0270520:CDS |
| TCGTCTTGAATTGCAGACAG+AGG | 0.683191 | 2_3:-1730674 | Msa0270520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAATAATAATAATAA+TGG | + | chr2_3:1731054-1731073 | None:intergenic | 0.0% |
| !! | ACATATAATGAAAAAATAAA+AGG | + | chr2_3:1730657-1730676 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTCATTATATG+TGG | - | chr2_3:1730656-1730675 | Msa0270520:CDS | 10.0% |
| !!! | AAATAATAATAATAATGGAT+AGG | + | chr2_3:1731049-1731068 | None:intergenic | 10.0% |
| !! | ATATTATAAAAACACTAAAA+TGG | - | chr2_3:1731175-1731194 | Msa0270520:intron | 10.0% |
| !! | TTAATATTTATGTATGAATC+AGG | - | chr2_3:1729774-1729793 | Msa0270520:CDS | 15.0% |
| !! | AAAAGATGCTATTAATAATT+TGG | - | chr2_3:1730579-1730598 | Msa0270520:intron | 15.0% |
| !! | TAAAGAAATATCATATCTTA+AGG | - | chr2_3:1730966-1730985 | Msa0270520:CDS | 15.0% |
| !! | AAATTGAACTAAAAATACAT+AGG | + | chr2_3:1731220-1731239 | None:intergenic | 15.0% |
| !! | AAATTTATGAAATAGCAATT+TGG | - | chr2_3:1731322-1731341 | Msa0270520:CDS | 15.0% |
| !!! | AACAAAATAGTGATTTGTTA+GGG | + | chr2_3:1729902-1729921 | None:intergenic | 20.0% |
| !!! | AAACAAAATAGTGATTTGTT+AGG | + | chr2_3:1729903-1729922 | None:intergenic | 20.0% |
| !! | TGTAATGAAATAAAAATCCA+TGG | + | chr2_3:1730118-1730137 | None:intergenic | 20.0% |
| !! | AGATGATGCTATTAATAATA+TGG | - | chr2_3:1730192-1730211 | Msa0270520:intron | 20.0% |
| !! | ATGAAAAAATAAAAGGAGAT+AGG | + | chr2_3:1730650-1730669 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTATATGTGGAT+AGG | - | chr2_3:1730661-1730680 | Msa0270520:CDS | 20.0% |
| !!! | TTTTTCATTATATGTGGATA+GGG | - | chr2_3:1730662-1730681 | Msa0270520:CDS | 20.0% |
| !!! | AATTGATAAATTTTAGATGC+AGG | - | chr2_3:1730711-1730730 | Msa0270520:CDS | 20.0% |
| !!! | TTCTTTATATTTGTTTGCTA+AGG | + | chr2_3:1730953-1730972 | None:intergenic | 20.0% |
| !! | AACACTAAAATGGAATTTAA+CGG | - | chr2_3:1731185-1731204 | Msa0270520:intron | 20.0% |
| !!! | GTATTTTTAGTTCAATTTAC+CGG | - | chr2_3:1731222-1731241 | Msa0270520:intron | 20.0% |
| !!! | GCTATTTCATAAATTTTAAG+AGG | + | chr2_3:1731318-1731337 | None:intergenic | 20.0% |
| !!! | TTCACTAACATTCATTTTAA+GGG | + | chr2_3:1731349-1731368 | None:intergenic | 20.0% |
| !!! | ATTCACTAACATTCATTTTA+AGG | + | chr2_3:1731350-1731369 | None:intergenic | 20.0% |
| !!! | GATTGGTATTCTTTAATTTA+AGG | - | chr2_3:1731495-1731514 | Msa0270520:intron | 20.0% |
| ! | AAACTTTCATGCAAAACTAT+TGG | - | chr2_3:1729689-1729708 | Msa0270520:intron | 25.0% |
| ! | TTAACTAAAACTCTAACAGT+TGG | - | chr2_3:1729946-1729965 | Msa0270520:intron | 25.0% |
| !!! | TTGTAGTTAGCTTGTATAAT+TGG | + | chr2_3:1730246-1730265 | None:intergenic | 25.0% |
| !! | TGTCTAAAACATATAGTGAT+AGG | - | chr2_3:1730286-1730305 | Msa0270520:intron | 25.0% |
| ! | CTATGAGTTTCACAAAATTA+CGG | - | chr2_3:1730343-1730362 | Msa0270520:intron | 25.0% |
| ! | AGAAAATCACCAAGAAAAAT+CGG | + | chr2_3:1730488-1730507 | None:intergenic | 25.0% |
| ! | AATAAAAGGAGATAGGTAAT+AGG | + | chr2_3:1730643-1730662 | None:intergenic | 25.0% |
| !!! | TCCTTATGATTTTTTGAACT+TGG | - | chr2_3:1731077-1731096 | Msa0270520:intron | 25.0% |
| ! | TCCAAGTTCAAAAAATCATA+AGG | + | chr2_3:1731081-1731100 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTGAACTTGGAA+TGG | - | chr2_3:1731082-1731101 | Msa0270520:intron | 25.0% |
| ! | ACTAAAAATACATAGGATGT+AGG | + | chr2_3:1731213-1731232 | None:intergenic | 25.0% |
| !! | AAAAATTGTGGTGCTAAATT+TGG | + | chr2_3:1731385-1731404 | None:intergenic | 25.0% |
| ! | CAAAACCTTCAAAAAAATTG+TGG | + | chr2_3:1731397-1731416 | None:intergenic | 25.0% |
| !! | TTTTGTGTTTATCTTAAGCA+TGG | - | chr2_3:1731412-1731431 | Msa0270520:intron | 25.0% |
| ! | GAGAACCTATTCAAATAAAT+GGG | - | chr2_3:1731434-1731453 | Msa0270520:intron | 25.0% |
| ! | TTGATGTTTACTAAACTGAT+TGG | - | chr2_3:1731478-1731497 | Msa0270520:intron | 25.0% |
| ! | AAATTGTAAAAGTGGAACAA+TGG | + | chr2_3:1731554-1731573 | None:intergenic | 25.0% |
| ! | ACTATTAGCATTTAACGAAA+GGG | + | chr2_3:1731809-1731828 | None:intergenic | 25.0% |
| !! | AATCTTTCTTTGATGTTTTG+TGG | + | chr2_3:1732016-1732035 | None:intergenic | 25.0% |
| AAATTACAGAACCTTGTGAT+GGG | + | chr2_3:1729590-1729609 | None:intergenic | 30.0% | |
| AAAATTACAGAACCTTGTGA+TGG | + | chr2_3:1729591-1729610 | None:intergenic | 30.0% | |
| ! | TGAATCAGGTTTGAAATGAA+TGG | - | chr2_3:1729788-1729807 | Msa0270520:CDS | 30.0% |
| ! | ATTTTGTCAAAGCTACACTT+CGG | + | chr2_3:1730400-1730419 | None:intergenic | 30.0% |
| !! | GTGTAGCTTTGACAAAATTA+CGG | - | chr2_3:1730402-1730421 | Msa0270520:intron | 30.0% |
| AGGAAATCAAAATGTGTATG+AGG | - | chr2_3:1730770-1730789 | Msa0270520:CDS | 30.0% | |
| GTGTATGAGGATTATTATTG+TGG | - | chr2_3:1730783-1730802 | Msa0270520:intron | 30.0% | |
| TGAGGATTATTATTGTGGAA+TGG | - | chr2_3:1730788-1730807 | Msa0270520:intron | 30.0% | |
| GATTATTATTGTGGAATGGT+TGG | - | chr2_3:1730792-1730811 | Msa0270520:intron | 30.0% | |
| !! | TCTTTTAGGTATACTAGTCA+AGG | + | chr2_3:1730899-1730918 | None:intergenic | 30.0% |
| ! | ACTAACATCAGATCTCTTTT+AGG | + | chr2_3:1730913-1730932 | None:intergenic | 30.0% |
| TAAAAGAGATCTGATGTTAG+TGG | - | chr2_3:1730912-1730931 | Msa0270520:CDS | 30.0% | |
| CTTTCTCCATTGAAATAAAC+TGG | + | chr2_3:1731155-1731174 | None:intergenic | 30.0% | |
| !!! | TAGCACCACAATTTTTTTGA+AGG | - | chr2_3:1731389-1731408 | Msa0270520:intron | 30.0% |
| GGAGAACCTATTCAAATAAA+TGG | - | chr2_3:1731433-1731452 | Msa0270520:intron | 30.0% | |
| GTCTACCCATTTATTTGAAT+AGG | + | chr2_3:1731442-1731461 | None:intergenic | 30.0% | |
| GGTTCTCAAAATTGTAAAAG+TGG | + | chr2_3:1731562-1731581 | None:intergenic | 30.0% | |
| ! | CAAAGGAGTTGCATATATTT+TGG | + | chr2_3:1731583-1731602 | None:intergenic | 30.0% |
| CAAAATATATGCAACTCCTT+TGG | - | chr2_3:1731581-1731600 | Msa0270520:intron | 30.0% | |
| TCTTGTAAATTATCATGTCG+TGG | - | chr2_3:1731650-1731669 | Msa0270520:CDS | 30.0% | |
| CTATTAGCATTTAACGAAAG+GGG | + | chr2_3:1731808-1731827 | None:intergenic | 30.0% | |
| GACTATTAGCATTTAACGAA+AGG | + | chr2_3:1731810-1731829 | None:intergenic | 30.0% | |
| !!! | AGAATTTTTTGTACACAGCA+TGG | + | chr2_3:1731955-1731974 | None:intergenic | 30.0% |
| CATCAAGTTCTTGGAGATAT+CGG | - | chr2_3:1729536-1729555 | Msa0270520:CDS | 35.0% | |
| ! | TCTTGTAGTACTTTTCTTGC+AGG | - | chr2_3:1729628-1729647 | Msa0270520:intron | 35.0% |
| ! | CTTGTAGTACTTTTCTTGCA+GGG | - | chr2_3:1729629-1729648 | Msa0270520:intron | 35.0% |
| TTGCAAGCAACAAATAAGCT+TGG | + | chr2_3:1729669-1729688 | None:intergenic | 35.0% | |
| TGAGTTTCACAAAATTACGG+TGG | - | chr2_3:1730346-1730365 | Msa0270520:intron | 35.0% | |
| CACATTGTGATTCTACCTAA+CGG | - | chr2_3:1730428-1730447 | Msa0270520:intron | 35.0% | |
| ATGTCAACATCATGATTCTC+TGG | + | chr2_3:1730553-1730572 | None:intergenic | 35.0% | |
| AGAGAATCATGATGTTGACA+TGG | - | chr2_3:1730552-1730571 | Msa0270520:intron | 35.0% | |
| GAATCAAGTTTCAGACTACA+TGG | - | chr2_3:1730738-1730757 | Msa0270520:CDS | 35.0% | |
| TCTGCAATTCAAGACGATAA+TGG | + | chr2_3:1730825-1730844 | None:intergenic | 35.0% | |
| !!! | TTTTTTGAACTTGGAATGGC+AGG | - | chr2_3:1731086-1731105 | Msa0270520:intron | 35.0% |
| CAGACACCAGTTTATTTCAA+TGG | - | chr2_3:1731146-1731165 | Msa0270520:intron | 35.0% | |
| TCCTTTGGTATTTGCATAGA+TGG | - | chr2_3:1731596-1731615 | Msa0270520:intron | 35.0% | |
| TCCATCTATGCAAATACCAA+AGG | + | chr2_3:1731600-1731619 | None:intergenic | 35.0% | |
| ATTTGCATAGATGGAGAACA+TGG | - | chr2_3:1731605-1731624 | Msa0270520:intron | 35.0% | |
| ATGCTCGTTCTATACTCAAT+AGG | - | chr2_3:1731717-1731736 | Msa0270520:intron | 35.0% | |
| TGCTCGTTCTATACTCAATA+GGG | - | chr2_3:1731718-1731737 | Msa0270520:intron | 35.0% | |
| TACTCAATAGGGTTCCATAT+TGG | - | chr2_3:1731729-1731748 | Msa0270520:intron | 35.0% | |
| TGCAGATATTGAGTCCAATA+TGG | + | chr2_3:1731746-1731765 | None:intergenic | 35.0% | |
| AAATTCTCAAGTCCTGAGAA+AGG | - | chr2_3:1731968-1731987 | Msa0270520:CDS | 35.0% | |
| TTTCTTGCAGGGAGAGATAA+GGG | - | chr2_3:1729488-1729507 | Msa0270520:CDS | 40.0% | |
| CGATATCTCCAAGAACTTGA+TGG | + | chr2_3:1729538-1729557 | None:intergenic | 40.0% | |
| TGGAGATATCGGTAATCTTG+AGG | - | chr2_3:1729547-1729566 | Msa0270520:CDS | 40.0% | |
| GGAGATATCGGTAATCTTGA+GGG | - | chr2_3:1729548-1729567 | Msa0270520:CDS | 40.0% | |
| GAGATATCGGTAATCTTGAG+GGG | - | chr2_3:1729549-1729568 | Msa0270520:CDS | 40.0% | |
| CACTTCTAATTCTGGTACCA+GGG | + | chr2_3:1729831-1729850 | None:intergenic | 40.0% | |
| TTAGCTGGCACTTCTAATTC+TGG | + | chr2_3:1729839-1729858 | None:intergenic | 40.0% | |
| GATTCTTTAGTACAACGCCT+TGG | + | chr2_3:1729868-1729887 | None:intergenic | 40.0% | |
| AACCAAGGTTAGAAGAACCA+TGG | - | chr2_3:1730098-1730117 | Msa0270520:intron | 40.0% | |
| ATCCATGGTTCTTCTAACCT+TGG | + | chr2_3:1730103-1730122 | None:intergenic | 40.0% | |
| ATGTCAACAGTCTGATCCTT+GGG | + | chr2_3:1730166-1730185 | None:intergenic | 40.0% | |
| AAGGATCAGACTGTTGACAT+GGG | - | chr2_3:1730166-1730185 | Msa0270520:intron | 40.0% | |
| GCTAACTACAAAACGCAATG+TGG | - | chr2_3:1730255-1730274 | Msa0270520:intron | 40.0% | |
| GTAGGTTTAGACTAACCGTT+AGG | + | chr2_3:1730446-1730465 | None:intergenic | 40.0% | |
| TCACCAAGAAAAATCGGTCT+GGG | + | chr2_3:1730482-1730501 | None:intergenic | 40.0% | |
| ATCACCAAGAAAAATCGGTC+TGG | + | chr2_3:1730483-1730502 | None:intergenic | 40.0% | |
| AGACTACATGGAATCACAGA+AGG | - | chr2_3:1730750-1730769 | Msa0270520:CDS | 40.0% | |
| TAGGTATACTAGTCAAGGAG+AGG | + | chr2_3:1730894-1730913 | None:intergenic | 40.0% | |
| GCAGCAAGCAATACTATATC+TGG | - | chr2_3:1731004-1731023 | Msa0270520:intron | 40.0% | |
| GTCATGCACAATAGATGATC+CGG | + | chr2_3:1731244-1731263 | None:intergenic | 40.0% | |
| CTATTGTGCATGACAAAGAG+AGG | - | chr2_3:1731250-1731269 | Msa0270520:intron | 40.0% | |
| CAATATCTGCAGAACCTATC+TGG | - | chr2_3:1731755-1731774 | Msa0270520:intron | 40.0% | |
| ! | GTGTATTTTCACCAACTGTG+TGG | + | chr2_3:1731909-1731928 | None:intergenic | 40.0% |
| AGAGCAATATGACCTTTCTC+AGG | + | chr2_3:1731983-1732002 | None:intergenic | 40.0% | |
| ! | TCTTTGATGTTTTGTGGCAG+TGG | + | chr2_3:1732010-1732029 | None:intergenic | 40.0% |
| GTTTCTTGCAGGGAGAGATA+AGG | - | chr2_3:1729487-1729506 | Msa0270520:CDS | 45.0% | |
| GAGAGATAAGGGAAAGCAGA+AGG | - | chr2_3:1729499-1729518 | Msa0270520:CDS | 45.0% | |
| AGATTTCACGACCCATCACA+AGG | - | chr2_3:1729576-1729595 | Msa0270520:CDS | 45.0% | |
| GCACTTCTAATTCTGGTACC+AGG | + | chr2_3:1729832-1729851 | None:intergenic | 45.0% | |
| GTGCCAGCTAATTATGACCA+AGG | - | chr2_3:1729848-1729867 | Msa0270520:intron | 45.0% | |
| ACGCCTTGGTCATAATTAGC+TGG | + | chr2_3:1729854-1729873 | None:intergenic | 45.0% | |
| ATCGTCTCAACTCTCAACCA+AGG | - | chr2_3:1730083-1730102 | Msa0270520:intron | 45.0% | |
| CATGTCAACAGTCTGATCCT+TGG | + | chr2_3:1730167-1730186 | None:intergenic | 45.0% | |
| CAAGGATCAGACTGTTGACA+TGG | - | chr2_3:1730165-1730184 | Msa0270520:intron | 45.0% | |
| TTGTCAAAGCTACACTTCGG+AGG | + | chr2_3:1730397-1730416 | None:intergenic | 45.0% | |
| ACCAAGAAAAATCGGTCTGG+GGG | + | chr2_3:1730480-1730499 | None:intergenic | 45.0% | |
| CACCAAGAAAAATCGGTCTG+GGG | + | chr2_3:1730481-1730500 | None:intergenic | 45.0% | |
| TGTGATGCGTTTCTGTTAGC+CGG | - | chr2_3:1730512-1730531 | Msa0270520:intron | 45.0% | |
| CTGGCTCAAATGTCAAGATC+CGG | + | chr2_3:1730534-1730553 | None:intergenic | 45.0% | |
| TCGTCTTGAATTGCAGACAG+AGG | - | chr2_3:1730828-1730847 | Msa0270520:intron | 45.0% | |
| GCATTCCATCTAGCAGAACT+TGG | - | chr2_3:1731627-1731646 | Msa0270520:intron | 45.0% | |
| CAAGACCAAGTTCTGCTAGA+TGG | + | chr2_3:1731635-1731654 | None:intergenic | 45.0% | |
| CTGCGCATCAATCATTGAAG+GGG | + | chr2_3:1731685-1731704 | None:intergenic | 45.0% | |
| GCTGCGCATCAATCATTGAA+GGG | + | chr2_3:1731686-1731705 | None:intergenic | 45.0% | |
| TGCTGCGCATCAATCATTGA+AGG | + | chr2_3:1731687-1731706 | None:intergenic | 45.0% | |
| GTTCTTTGCAGTAGCCAGAT+AGG | + | chr2_3:1731772-1731791 | None:intergenic | 45.0% | |
| GGAAAGCAGAAGGCAGAAAG+AGG | - | chr2_3:1729509-1729528 | Msa0270520:CDS | 50.0% | |
| AAGCAGAAGGCAGAAAGAGG+TGG | - | chr2_3:1729512-1729531 | Msa0270520:CDS | 50.0% | |
| AGAGGTGGCCATCAAGTTCT+TGG | - | chr2_3:1729527-1729546 | Msa0270520:CDS | 50.0% | |
| AAAATCGGTCTGGGGGATAG+AGG | + | chr2_3:1730473-1730492 | None:intergenic | 50.0% | |
| !! | TCCCCCAGACCGATTTTTCT+TGG | - | chr2_3:1730476-1730495 | Msa0270520:intron | 50.0% |
| AGAACACTCACTGCTGCAGC+TGG | + | chr2_3:1729723-1729742 | None:intergenic | 55.0% | |
| TCCTCTTCGTTTGCAGACCC+TGG | - | chr2_3:1729811-1729830 | Msa0270520:intron | 55.0% | |
| ACCAGGGTCTGCAAACGAAG+AGG | + | chr2_3:1729815-1729834 | None:intergenic | 55.0% | |
| ! | CTGGGGGATAGAGGAAGTGT+AGG | + | chr2_3:1730464-1730483 | None:intergenic | 55.0% |
| CAGATACTGCGCCACACAGT+TGG | - | chr2_3:1731895-1731914 | Msa0270520:intron | 55.0% | |
| CCTTGGGCTCGAACAAGAGC+TGG | + | chr2_3:1730150-1730169 | None:intergenic | 60.0% | |
| CCAGCTCTTGTTCGAGCCCA+AGG | - | chr2_3:1730147-1730166 | Msa0270520:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1729485 | 1732039 | 1729485 | ID=Msa0270520;Name=Msa0270520 |
| chr2_3 | mRNA | 1729485 | 1732039 | 1729485 | ID=Msa0270520-mRNA-1;Parent=Msa0270520;Name=Msa0270520-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|0.71|1|1|7|0|272 |
| chr2_3 | exon | 1731927 | 1732039 | 1731927 | ID=Msa0270520-mRNA-1:exon:845;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1731635 | 1731728 | 1731635 | ID=Msa0270520-mRNA-1:exon:844;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1731288 | 1731385 | 1731288 | ID=Msa0270520-mRNA-1:exon:843;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1730888 | 1730993 | 1730888 | ID=Msa0270520-mRNA-1:exon:842;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1730620 | 1730791 | 1730620 | ID=Msa0270520-mRNA-1:exon:841;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1729726 | 1729819 | 1729726 | ID=Msa0270520-mRNA-1:exon:840;Parent=Msa0270520-mRNA-1 |
| chr2_3 | exon | 1729485 | 1729626 | 1729485 | ID=Msa0270520-mRNA-1:exon:839;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1731927 | 1732039 | 1731927 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1731635 | 1731728 | 1731635 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1731288 | 1731385 | 1731288 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1730888 | 1730993 | 1730888 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1730620 | 1730791 | 1730620 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1729726 | 1729819 | 1729726 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| chr2_3 | CDS | 1729485 | 1729626 | 1729485 | ID=Msa0270520-mRNA-1:cds;Parent=Msa0270520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
