Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401150 | XP_003599380.1 | 94.118 | 340 | 2 | 1 | 1 | 322 | 1 | 340 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401150 | sp|Q9LM02|SMT1_ARATH | 82.090 | 335 | 42 | 1 | 1 | 317 | 1 | 335 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401150 | B7FHU0 | 94.118 | 340 | 2 | 1 | 1 | 322 | 1 | 340 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094940 | Msa0401150 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
| Msa0128320 | Msa0401150 | 0.850291 | 1.867389e-60 | -8.615850e-47 |
| Msa0401150 | Msa0447930 | 0.850923 | 1.240244e-60 | -8.615850e-47 |
| Msa0401150 | Msa0544930 | -0.824451 | 8.015931e-54 | -8.615850e-47 |
| Msa0401150 | Msa0641030 | -0.807133 | 5.864604e-50 | -8.615850e-47 |
| Msa0401150 | Msa0884620 | -0.827715 | 1.342243e-54 | -8.615850e-47 |
| Msa0401150 | Msa0902470 | 0.874674 | 5.615426e-68 | -8.615850e-47 |
| Msa0401150 | Msa1445250 | -0.812018 | 5.235335e-51 | -8.615850e-47 |
| Msa0304270 | Msa0401150 | 0.818371 | 2.029653e-52 | -8.615850e-47 |
| Msa0304310 | Msa0401150 | 0.817736 | 2.824383e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401150 | MtrunA17_Chr3g0089671 | 94.118 | 340 | 2 | 1 | 1 | 322 | 1 | 340 | 0.0 | 661 |
| Msa0401150 | MtrunA17_Chr3g0143441 | 39.286 | 336 | 168 | 5 | 8 | 322 | 39 | 359 | 4.69e-77 | 239 |
| Msa0401150 | MtrunA17_Chr6g0478481 | 27.545 | 167 | 94 | 4 | 33 | 183 | 238 | 393 | 2.21e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401150 | AT5G13710.1 | 82.090 | 335 | 42 | 1 | 1 | 317 | 1 | 335 | 0.0 | 584 |
| Msa0401150 | AT5G13710.2 | 82.090 | 335 | 42 | 1 | 1 | 317 | 1 | 335 | 0.0 | 584 |
| Msa0401150 | AT1G20330.1 | 40.120 | 334 | 162 | 6 | 8 | 319 | 39 | 356 | 7.35e-79 | 244 |
| Msa0401150 | AT1G76090.1 | 38.529 | 340 | 172 | 6 | 4 | 321 | 34 | 358 | 1.87e-75 | 236 |
| Msa0401150 | AT1G48600.1 | 27.976 | 168 | 95 | 5 | 83 | 233 | 256 | 414 | 8.23e-11 | 63.2 |
| Msa0401150 | AT1G48600.2 | 27.976 | 168 | 95 | 5 | 83 | 233 | 272 | 430 | 9.14e-11 | 63.2 |
Find 85 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTCAATATGTTAAAAT+TGG | 0.172129 | 3_2:+26178715 | Msa0401150:three_prime_UTR |
| CAGAAGCAATACCATATTTC+TGG | 0.200578 | 3_2:-26177145 | None:intergenic |
| TTATGAGTTACTGTGATTCT+AGG | 0.274822 | 3_2:+26178488 | Msa0401150:three_prime_UTR |
| TTTAAGTTGCTTGATTGTTT+AGG | 0.289919 | 3_2:+26178559 | Msa0401150:three_prime_UTR |
| ATGGACACCTTGTTGCAAAA+TGG | 0.313547 | 3_2:-26173675 | None:intergenic |
| CAGGCACTCAATCGCAAAAC+TGG | 0.331030 | 3_2:+26174852 | Msa0401150:intron |
| CTGCAGGCAGAAATTGAAAT+TGG | 0.342373 | 3_2:+26176508 | Msa0401150:intron |
| AAAAGAATTATAATTGTGTT+TGG | 0.348275 | 3_2:+26178512 | Msa0401150:three_prime_UTR |
| GAAAGCTAATTATAGTGATA+TGG | 0.357093 | 3_2:+26172931 | Msa0401150:CDS |
| CACTTCCTTGCTTTACAACT+TGG | 0.357247 | 3_2:+26173817 | Msa0401150:CDS |
| ACTGAATAAGTGGAACAAAT+AGG | 0.360573 | 3_2:+26178456 | Msa0401150:exon |
| CAATGTGCTTCCTGCATTAG+TGG | 0.366041 | 3_2:+26178616 | Msa0401150:three_prime_UTR |
| GTTAAGGCTCTGGAGTTTGT+TGG | 0.384379 | 3_2:+26177470 | Msa0401150:CDS |
| ATACCTTTCCCCTGGTGATC+TGG | 0.394747 | 3_2:-26174505 | None:intergenic |
| AAGGAAAGAGGACAAAGATA+TGG | 0.396648 | 3_2:-26170784 | None:intergenic |
| TAATGAATCTATCAATTTAA+CGG | 0.401625 | 3_2:-26178743 | None:intergenic |
| TAGAGCTTCAAGACACTTTG+TGG | 0.411789 | 3_2:-26176557 | None:intergenic |
| ATTCAGTTGCTTTCTGAAGC+AGG | 0.422845 | 3_2:-26178440 | None:intergenic |
| GCCAAATCCATTGCTTGAAA+AGG | 0.428187 | 3_2:-26170993 | None:intergenic |
| ACTTAGCAGCTTCCGTCTTA+CGG | 0.429065 | 3_2:+26177104 | Msa0401150:CDS |
| AATATTTCACATACAGCATC+TGG | 0.437219 | 3_2:-26176027 | None:intergenic |
| ACTTAAAACAGCAATACTTA+TGG | 0.442121 | 3_2:-26178543 | None:intergenic |
| TGAACCCTTTGACTCCCCTT+CGG | 0.449592 | 3_2:-26177500 | None:intergenic |
| ATGGATTTGGCTTCGAATCT+CGG | 0.452661 | 3_2:+26171005 | Msa0401150:CDS |
| TCAGAAAGCAACTGAATAAG+TGG | 0.457259 | 3_2:+26178446 | Msa0401150:exon |
| AAAGATGAAAACCTTCTGTC+CGG | 0.459180 | 3_2:-26173848 | None:intergenic |
| AGCTTCCGTCTTACGGCTGT+TGG | 0.465882 | 3_2:+26177111 | Msa0401150:CDS |
| ACATTTGTAGGTTAAGGCTC+TGG | 0.470813 | 3_2:+26177460 | Msa0401150:intron |
| TCTTCTGATGCAGATGGGTA+GGG | 0.474313 | 3_2:+26173761 | Msa0401150:intron |
| TCAATATGTTAAAATTGGAC+CGG | 0.481799 | 3_2:+26178720 | Msa0401150:three_prime_UTR |
| ATACCATATTTCTGGTGAAA+AGG | 0.482576 | 3_2:-26177137 | None:intergenic |
| GCTGCAGAGGGTCTAGTTGA+AGG | 0.505379 | 3_2:+26177539 | Msa0401150:CDS |
| GAGAAGTATCATGCATCCTA+TGG | 0.508363 | 3_2:+26172890 | Msa0401150:CDS |
| GTTTGTTGGACTTGCTCCGA+AGG | 0.508709 | 3_2:+26177484 | Msa0401150:CDS |
| TTGCTCCGAAGGGGAGTCAA+AGG | 0.509030 | 3_2:+26177495 | Msa0401150:CDS |
| CTTCTGATGCAGATGGGTAG+GGG | 0.513432 | 3_2:+26173762 | Msa0401150:intron |
| TTTGTATGTGAAGGTCATAT+GGG | 0.514447 | 3_2:+26177017 | Msa0401150:intron |
| GGTCATATGGGAGAAAGATC+TGG | 0.515289 | 3_2:+26177029 | Msa0401150:intron |
| GAATCTATCAATTTAACGGC+CGG | 0.518607 | 3_2:-26178739 | None:intergenic |
| TACAGCATCTGGTGCATGGC+AGG | 0.521675 | 3_2:-26176016 | None:intergenic |
| ATTTATAGAGTGTTAAAGCC+TGG | 0.522060 | 3_2:+26176330 | Msa0401150:CDS |
| TAAGCAGCAAAACATTGGCC+AGG | 0.524306 | 3_2:-26176348 | None:intergenic |
| GCAGAAATTGAAATTGGTGA+TGG | 0.525090 | 3_2:+26176514 | Msa0401150:CDS |
| GAGAAGTGACTCTTGTCTAA+AGG | 0.526724 | 3_2:-26177081 | None:intergenic |
| TTCTTCTGATGCAGATGGGT+AGG | 0.532055 | 3_2:+26173760 | Msa0401150:intron |
| GGTTCAAGATTTCCTTGAGA+AGG | 0.535966 | 3_2:+26177517 | Msa0401150:CDS |
| CAGAAATTGAAATTGGTGAT+GGG | 0.537595 | 3_2:+26176515 | Msa0401150:CDS |
| GACCCTCTGCAGCCTTCTCA+AGG | 0.541641 | 3_2:-26177529 | None:intergenic |
| ACTACACTATCCACTAATGC+AGG | 0.541848 | 3_2:-26178626 | None:intergenic |
| TTTGTGGTCAATCTAATGTC+AGG | 0.541951 | 3_2:-26176541 | None:intergenic |
| TTCATCCTCTTGACCTCCAT+AGG | 0.544369 | 3_2:-26172906 | None:intergenic |
| AAAGGCAAGTACCACGGAAG+AGG | 0.547176 | 3_2:-26177063 | None:intergenic |
| CTTGAAGCTCTAAAGCAAGC+AGG | 0.547652 | 3_2:+26176568 | Msa0401150:CDS |
| TGGTCTTAAGCCCGGACAGA+AGG | 0.551005 | 3_2:+26173837 | Msa0401150:CDS |
| TTACAACTTGGTCTTAAGCC+CGG | 0.554828 | 3_2:+26173829 | Msa0401150:CDS |
| TTCCTTGAGAAGGCTGCAGA+GGG | 0.556231 | 3_2:+26177527 | Msa0401150:CDS |
| AAGATGAAAACCTTCTGTCC+GGG | 0.556269 | 3_2:-26173847 | None:intergenic |
| GGCGTCCAACAGCCGTAAGA+CGG | 0.556704 | 3_2:-26177116 | None:intergenic |
| ATTCATAAGCAGCAAAACAT+TGG | 0.559750 | 3_2:-26176353 | None:intergenic |
| TTTGTTGGACTTGCTCCGAA+GGG | 0.560389 | 3_2:+26177485 | Msa0401150:CDS |
| ATGGAGGTCAAGAGGATGAA+AGG | 0.562038 | 3_2:+26172909 | Msa0401150:CDS |
| TAAAACAGCAATACTTATGG+TGG | 0.567579 | 3_2:-26178540 | None:intergenic |
| CACATACAGCATCTGGTGCA+TGG | 0.575106 | 3_2:-26176020 | None:intergenic |
| TCAAAACTATTGTCTTCGAA+TGG | 0.577172 | 3_2:-26175970 | None:intergenic |
| TTTCCTTGAGAAGGCTGCAG+AGG | 0.588645 | 3_2:+26177526 | Msa0401150:CDS |
| ATAACGAGTACCAGATCACC+AGG | 0.590364 | 3_2:+26174495 | Msa0401150:CDS |
| TGCTCCGAAGGGGAGTCAAA+GGG | 0.593371 | 3_2:+26177496 | Msa0401150:CDS |
| TAAGACCAAGTTGTAAAGCA+AGG | 0.600321 | 3_2:-26173822 | None:intergenic |
| GTACCAGATCACCAGGGGAA+AGG | 0.607731 | 3_2:+26174502 | Msa0401150:CDS |
| TGCATCCTATGGAGGTCAAG+AGG | 0.610680 | 3_2:+26172901 | Msa0401150:CDS |
| CAAAACACATACCTTTCCCC+TGG | 0.613010 | 3_2:-26174513 | None:intergenic |
| AGCATCTGGTGCATGGCAGG+TGG | 0.619604 | 3_2:-26176013 | None:intergenic |
| TTGTTGGACTTGCTCCGAAG+GGG | 0.623793 | 3_2:+26177486 | Msa0401150:CDS |
| CATCAGACTCTCCTCTTCCG+TGG | 0.635051 | 3_2:+26177052 | Msa0401150:CDS |
| GCAGAGGGTCTAGTTGAAGG+TGG | 0.639355 | 3_2:+26177542 | Msa0401150:CDS |
| AAGTATCATGCATCCTATGG+AGG | 0.651186 | 3_2:+26172893 | Msa0401150:CDS |
| GAGAGTGACGCACTTATCGA+CGG | 0.652498 | 3_2:-26171060 | None:intergenic |
| CAAGACTTGCAACTTCGTCA+AGG | 0.656952 | 3_2:+26174881 | Msa0401150:CDS |
| ACTCAATCGCAAAACTGGAG+TGG | 0.680106 | 3_2:+26174857 | Msa0401150:CDS |
| TTGTCTAAAGGCAAGTACCA+CGG | 0.688137 | 3_2:-26177069 | None:intergenic |
| GATTTGGCTTCGAATCTCGG+TGG | 0.689368 | 3_2:+26171008 | Msa0401150:CDS |
| AACGAGTACCAGATCACCAG+GGG | 0.706914 | 3_2:+26174497 | Msa0401150:CDS |
| TAACGAGTACCAGATCACCA+GGG | 0.744545 | 3_2:+26174496 | Msa0401150:CDS |
| GTGTAATTTAGATCGAAACG+AGG | 0.758490 | 3_2:+26170947 | Msa0401150:intron |
| AGTGACGCACTTATCGACGG+CGG | 0.770311 | 3_2:-26171057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTGATTTTGA+AGG | + | chr3_2:26171229-26171248 | Msa0401150:intron | 10.0% |
| !! | ATAAAAAAAAAAAATAACAC+AGG | - | chr3_2:26171274-26171293 | None:intergenic | 10.0% |
| !! | TAAATTATAAATTAAGATTG+AGG | + | chr3_2:26177842-26177861 | Msa0401150:intron | 10.0% |
| !! | TTTATTCAATATGTTAAAAT+TGG | + | chr3_2:26178715-26178734 | Msa0401150:three_prime_UTR | 10.0% |
| !! | TTGAATAATAATGCATTTAT+TGG | - | chr3_2:26171832-26171851 | None:intergenic | 15.0% |
| !! | AGTATATTCTAAATTTGATT+TGG | - | chr3_2:26173218-26173237 | None:intergenic | 15.0% |
| !! | TTTCAATGATTAATGAATAT+TGG | + | chr3_2:26173455-26173474 | Msa0401150:intron | 15.0% |
| !!! | ATTTGTAAATTTTGTATAGT+TGG | + | chr3_2:26173512-26173531 | Msa0401150:intron | 15.0% |
| !!! | TTTGTAAATTTTGTATAGTT+GGG | + | chr3_2:26173513-26173532 | Msa0401150:intron | 15.0% |
| !! | TCTAATTTAAACTTAAGATA+TGG | - | chr3_2:26173543-26173562 | None:intergenic | 15.0% |
| !! | TCTTAAGTTTAAATTAGATT+CGG | + | chr3_2:26173545-26173564 | Msa0401150:intron | 15.0% |
| !!! | CTTTTTCTTTATTTGTTTTT+AGG | + | chr3_2:26173944-26173963 | Msa0401150:intron | 15.0% |
| !!! | AGAAATCATTGATTTATAAA+AGG | - | chr3_2:26174911-26174930 | None:intergenic | 15.0% |
| !!! | ATCAATGATTTCTATTTTTT+AGG | + | chr3_2:26174918-26174937 | Msa0401150:intron | 15.0% |
| !!! | GAGTACAATTTTAAAAATAT+TGG | - | chr3_2:26174977-26174996 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCATTGAAGTTA+TGG | + | chr3_2:26176648-26176667 | Msa0401150:intron | 15.0% |
| !! | AAAAATATCAAGATAATATC+AGG | + | chr3_2:26176915-26176934 | Msa0401150:intron | 15.0% |
| !!! | TATCTGTATTTAACATATTT+TGG | + | chr3_2:26177802-26177821 | Msa0401150:intron | 15.0% |
| !!! | ATTTAAAAGAGTTTTAAAGA+TGG | - | chr3_2:26178266-26178285 | None:intergenic | 15.0% |
| !! | AAAAGAATTATAATTGTGTT+TGG | + | chr3_2:26178512-26178531 | Msa0401150:three_prime_UTR | 15.0% |
| !! | TAATGAATCTATCAATTTAA+CGG | - | chr3_2:26178746-26178765 | None:intergenic | 15.0% |
| !! | GATGAAAAAAAAAGTGAAAT+GGG | - | chr3_2:26170910-26170929 | None:intergenic | 20.0% |
| !! | AGATGAAAAAAAAAGTGAAA+TGG | - | chr3_2:26170911-26170930 | None:intergenic | 20.0% |
| !!! | ATGTTTTAGATTTTGTAGTA+AGG | + | chr3_2:26172057-26172076 | Msa0401150:intron | 20.0% |
| !!! | TAATGAGTTGAATCAAAATA+TGG | + | chr3_2:26172159-26172178 | Msa0401150:intron | 20.0% |
| !! | AAAAGAAATTTATCCAAACA+GGG | - | chr3_2:26172383-26172402 | None:intergenic | 20.0% |
| !! | AAAAAGAAATTTATCCAAAC+AGG | - | chr3_2:26172384-26172403 | None:intergenic | 20.0% |
| !! | TAAGCATTTATCATGATAAA+CGG | - | chr3_2:26172425-26172444 | None:intergenic | 20.0% |
| !!! | ACTATTTTCATAAGATATCT+TGG | + | chr3_2:26172516-26172535 | Msa0401150:intron | 20.0% |
| !!! | AATGATCAATACATTTTATC+AGG | - | chr3_2:26172856-26172875 | None:intergenic | 20.0% |
| !!! | GATAAAATGTATTGATCATT+TGG | + | chr3_2:26172856-26172875 | Msa0401150:intron | 20.0% |
| !!! | GCTAATTATCAGTAATATTT+TGG | - | chr3_2:26172980-26172999 | None:intergenic | 20.0% |
| !! | AGTGAACATAAATATCATAA+AGG | - | chr3_2:26173360-26173379 | None:intergenic | 20.0% |
| !!! | TTAGATCTTCATATATTTTC+AGG | + | chr3_2:26173594-26173613 | Msa0401150:intron | 20.0% |
| !! | ATGTGCAAAAATGAATAAAA+TGG | - | chr3_2:26173697-26173716 | None:intergenic | 20.0% |
| !!! | CTTTATTTGTTTTTAGGTTT+TGG | + | chr3_2:26173950-26173969 | Msa0401150:intron | 20.0% |
| !! | ACAAAAATATTGTCAAATAG+CGG | + | chr3_2:26174144-26174163 | Msa0401150:intron | 20.0% |
| !! | TTGCTTACAAAAATCATTAA+GGG | + | chr3_2:26174434-26174453 | Msa0401150:intron | 20.0% |
| !! | TTTAAAAACTAGATATGAGA+AGG | - | chr3_2:26174569-26174588 | None:intergenic | 20.0% |
| !!! | TCTAGTTTTTAAAGCTTTAT+AGG | + | chr3_2:26174576-26174595 | Msa0401150:intron | 20.0% |
| !! | GTGTATAAAATTTATACCAA+AGG | - | chr3_2:26174694-26174713 | None:intergenic | 20.0% |
| !!! | TAATAGTCTTTTCATCAATA+AGG | - | chr3_2:26174741-26174760 | None:intergenic | 20.0% |
| !!! | TATTTTATTTAGACGTTGTT+TGG | + | chr3_2:26175023-26175042 | Msa0401150:intron | 20.0% |
| !! | ATTAAGAATCATAATTGACA+TGG | + | chr3_2:26175907-26175926 | Msa0401150:intron | 20.0% |
| !!! | TTAATCTTATTTGATAATGC+AGG | + | chr3_2:26175930-26175949 | Msa0401150:intron | 20.0% |
| !! | TTTATGTATTATGCATAGTA+TGG | + | chr3_2:26176294-26176313 | Msa0401150:intron | 20.0% |
| !!! | AAGGTATAGAAAAAATTTTC+AGG | + | chr3_2:26176439-26176458 | Msa0401150:intron | 20.0% |
| !! | AAATATATAATACTCGTGAA+AGG | - | chr3_2:26176629-26176648 | None:intergenic | 20.0% |
| !! | AGATCTTTCACTATTTATTT+AGG | - | chr3_2:26176801-26176820 | None:intergenic | 20.0% |
| !! | AATAAATAGTGAAAGATCTA+AGG | + | chr3_2:26176802-26176821 | Msa0401150:intron | 20.0% |
| !!! | GATATTTTTCTAGAATATCT+TGG | - | chr3_2:26176904-26176923 | None:intergenic | 20.0% |
| !!! | GTATTTTTGTTTTTGCATTT+TGG | + | chr3_2:26177358-26177377 | Msa0401150:intron | 20.0% |
| !! | TGTTATGAATTTACATTTGT+AGG | + | chr3_2:26177448-26177467 | Msa0401150:intron | 20.0% |
| !!! | TTTTCATAAGCTCAAAAATA+AGG | - | chr3_2:26177984-26178003 | None:intergenic | 20.0% |
| !! | AATACTAAATTGATTAACAC+TGG | + | chr3_2:26178316-26178335 | Msa0401150:intron | 20.0% |
| ! | AAAAGAAAGAAAAAGGAAAG+AGG | - | chr3_2:26170799-26170818 | None:intergenic | 25.0% |
| !!! | GCGTTTTAAAAGAAAGAAAA+AGG | - | chr3_2:26170806-26170825 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAATTCACAATG+TGG | - | chr3_2:26171101-26171120 | None:intergenic | 25.0% |
| ! | CACAAAATTGGGTAATTAAT+AGG | + | chr3_2:26171746-26171765 | Msa0401150:intron | 25.0% |
| ! | AAATATGGTGTGTATTGAAT+TGG | + | chr3_2:26172174-26172193 | Msa0401150:intron | 25.0% |
| ! | TACAATGTGAAGTCAAAATA+TGG | - | chr3_2:26172352-26172371 | None:intergenic | 25.0% |
| ! | AAATTTAAAAGACACTGTTC+AGG | - | chr3_2:26172764-26172783 | None:intergenic | 25.0% |
| ! | GAAAGCTAATTATAGTGATA+TGG | + | chr3_2:26172931-26172950 | Msa0401150:CDS | 25.0% |
| !!! | ATGTTCACTCTTTTTCAATA+TGG | + | chr3_2:26173371-26173390 | Msa0401150:intron | 25.0% |
| !!! | TGTTCACTCTTTTTCAATAT+GGG | + | chr3_2:26173372-26173391 | Msa0401150:intron | 25.0% |
| ! | AATCGAGAAATTTCTCTTAA+TGG | - | chr3_2:26173999-26174018 | None:intergenic | 25.0% |
| ! | TTGTAATAAATAGCATATCG+CGG | - | chr3_2:26174128-26174147 | None:intergenic | 25.0% |
| ! | AACTAAAGGTAAAACAAACA+AGG | - | chr3_2:26174416-26174435 | None:intergenic | 25.0% |
| !! | TGATTTTTGTAAGCAACTAA+AGG | - | chr3_2:26174430-26174449 | None:intergenic | 25.0% |
| ! | GTTGCTTACAAAAATCATTA+AGG | + | chr3_2:26174433-26174452 | Msa0401150:intron | 25.0% |
| ! | TGCTTACAAAAATCATTAAG+GGG | + | chr3_2:26174435-26174454 | Msa0401150:intron | 25.0% |
| ! | CTAAAATACTTTGATCTAAC+TGG | + | chr3_2:26174811-26174830 | Msa0401150:intron | 25.0% |
| !!! | TGATTTCTATTTTTTAGGAG+TGG | + | chr3_2:26174923-26174942 | Msa0401150:intron | 25.0% |
| !!! | GATTTCTATTTTTTAGGAGT+GGG | + | chr3_2:26174924-26174943 | Msa0401150:intron | 25.0% |
| ! | AACGTCTAAATAAAATATCC+AGG | - | chr3_2:26175020-26175039 | None:intergenic | 25.0% |
| ! | CACAAAAAATGAGAAGAATA+CGG | - | chr3_2:26175267-26175286 | None:intergenic | 25.0% |
| ! | AAACACATTATATTCACCTT+GGG | + | chr3_2:26175369-26175388 | Msa0401150:intron | 25.0% |
| ! | TAGTATGGAAAAAAGAAGTA+GGG | - | chr3_2:26176076-26176095 | None:intergenic | 25.0% |
| ! | ATAGTATGGAAAAAAGAAGT+AGG | - | chr3_2:26176077-26176096 | None:intergenic | 25.0% |
| !!! | ACTTCTTTTTTCCATACTAT+AGG | + | chr3_2:26176077-26176096 | Msa0401150:intron | 25.0% |
| ! | ATAGATAGAAACCTATAGTA+TGG | - | chr3_2:26176091-26176110 | None:intergenic | 25.0% |
| ! | CACTGCAATATTTAATATTG+CGG | - | chr3_2:26176216-26176235 | None:intergenic | 25.0% |
| !! | GTATCCACTATTTAAAATCT+TGG | + | chr3_2:26176241-26176260 | Msa0401150:intron | 25.0% |
| !! | TATGCCAAGATTTTAAATAG+TGG | - | chr3_2:26176248-26176267 | None:intergenic | 25.0% |
| !!! | CATATCATACCTTGATTTTT+TGG | - | chr3_2:26176419-26176438 | None:intergenic | 25.0% |
| ! | AAAATCAAGGTATGATATGA+AGG | + | chr3_2:26176420-26176439 | Msa0401150:intron | 25.0% |
| ! | AAACACTAATCCCTATTTAT+AGG | + | chr3_2:26176759-26176778 | Msa0401150:intron | 25.0% |
| ! | AACACTAATCCCTATTTATA+GGG | + | chr3_2:26176760-26176779 | Msa0401150:intron | 25.0% |
| ! | TCTATGTTTCCCTATAAATA+GGG | - | chr3_2:26176772-26176791 | None:intergenic | 25.0% |
| ! | TTCTATGTTTCCCTATAAAT+AGG | - | chr3_2:26176773-26176792 | None:intergenic | 25.0% |
| ! | ATTTAAGAGATAAGCCTAAT+TGG | + | chr3_2:26176972-26176991 | Msa0401150:intron | 25.0% |
| !! | TCTTTTCTTTTTGTATGTGA+AGG | + | chr3_2:26177008-26177027 | Msa0401150:intron | 25.0% |
| ! | TTCTGTAATACTTTGTTACT+CGG | + | chr3_2:26177239-26177258 | Msa0401150:intron | 25.0% |
| ! | TAATCAAATGTGTTGGAAAT+AGG | + | chr3_2:26177316-26177335 | Msa0401150:intron | 25.0% |
| ! | AATCAAATGTGTTGGAAATA+GGG | + | chr3_2:26177317-26177336 | Msa0401150:intron | 25.0% |
| ! | GAATTTACATTTGTAGGTTA+AGG | + | chr3_2:26177454-26177473 | Msa0401150:intron | 25.0% |
| !!! | ATAGTTTTTCAACTTAAACG+AGG | + | chr3_2:26177601-26177620 | Msa0401150:intron | 25.0% |
| ! | ATGTACAATTCTCATGAATA+AGG | + | chr3_2:26177638-26177657 | Msa0401150:intron | 25.0% |
| ! | ATTTATTAGCAATTCACTCA+AGG | - | chr3_2:26177706-26177725 | None:intergenic | 25.0% |
| ! | GAGTGAATTGCTAATAAATT+AGG | + | chr3_2:26177707-26177726 | Msa0401150:intron | 25.0% |
| ! | ATTGCTAATAAATTAGGCTA+TGG | + | chr3_2:26177713-26177732 | Msa0401150:intron | 25.0% |
| !! | GGCTTTCATCTAATAATTTT+CGG | - | chr3_2:26177775-26177794 | None:intergenic | 25.0% |
| ! | AAATTATGGTACAAGAGTTA+AGG | + | chr3_2:26177946-26177965 | Msa0401150:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr3_2:26178098-26178117 | None:intergenic | 25.0% |
| ! | ACTTAAAACAGCAATACTTA+TGG | - | chr3_2:26178546-26178565 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGCTTGATTGTTT+AGG | + | chr3_2:26178559-26178578 | Msa0401150:three_prime_UTR | 25.0% |
| !! | GATTCAACTTTTGAATAACT+TGG | - | chr3_2:26178685-26178704 | None:intergenic | 25.0% |
| ! | TCAATATGTTAAAATTGGAC+CGG | + | chr3_2:26178720-26178739 | Msa0401150:three_prime_UTR | 25.0% |
| GGAATCAAATGTGATAAAGA+TGG | - | chr3_2:26170878-26170897 | None:intergenic | 30.0% | |
| !! | CTTTAAACCTTTTCAAGCAA+TGG | + | chr3_2:26170986-26171005 | Msa0401150:exon | 30.0% |
| !! | CTACTAGTATTACTTTTCTG+TGG | + | chr3_2:26171508-26171527 | Msa0401150:intron | 30.0% |
| ACTGAAAAACATTGAATCCT+TGG | + | chr3_2:26171536-26171555 | Msa0401150:intron | 30.0% | |
| !! | TAGTGTATAGCTTTGAACTT+TGG | + | chr3_2:26171580-26171599 | Msa0401150:intron | 30.0% |
| !! | AGTGTATAGCTTTGAACTTT+GGG | + | chr3_2:26171581-26171600 | Msa0401150:intron | 30.0% |
| AAAAAGAAGCAATAATCCTG+TGG | + | chr3_2:26171684-26171703 | Msa0401150:intron | 30.0% | |
| TCATGTAGATTGCACAAAAT+TGG | + | chr3_2:26171734-26171753 | Msa0401150:intron | 30.0% | |
| CATGTAGATTGCACAAAATT+GGG | + | chr3_2:26171735-26171754 | Msa0401150:intron | 30.0% | |
| TTGTACAAAATGTGTCATGT+TGG | + | chr3_2:26171806-26171825 | Msa0401150:intron | 30.0% | |
| ACTGTCAACAATATGATGTT+AGG | - | chr3_2:26171905-26171924 | None:intergenic | 30.0% | |
| AACTTTACATAACCAAAACG+TGG | - | chr3_2:26172026-26172045 | None:intergenic | 30.0% | |
| TACAACTGACAACAATATGT+TGG | - | chr3_2:26172235-26172254 | None:intergenic | 30.0% | |
| TATCATCTCAAACAATGTCT+AGG | - | chr3_2:26172266-26172285 | None:intergenic | 30.0% | |
| GTTACACATTTATGTTGTTG+TGG | + | chr3_2:26172294-26172313 | Msa0401150:intron | 30.0% | |
| TTGACTTCACATTGTAAACT+TGG | + | chr3_2:26172356-26172375 | Msa0401150:intron | 30.0% | |
| TGACTTCACATTGTAAACTT+GGG | + | chr3_2:26172357-26172376 | Msa0401150:intron | 30.0% | |
| ! | TTTTGTCACATTCTCTTCAT+AGG | - | chr3_2:26172546-26172565 | None:intergenic | 30.0% |
| AGAATGTGACAAAAAGCTTA+TGG | + | chr3_2:26172552-26172571 | Msa0401150:intron | 30.0% | |
| GAATGTGACAAAAAGCTTAT+GGG | + | chr3_2:26172553-26172572 | Msa0401150:intron | 30.0% | |
| !! | ATGTCATAAGCTGTTTTCAT+AGG | + | chr3_2:26172578-26172597 | Msa0401150:intron | 30.0% |
| TGAACAACGTTACAAAACAA+GGG | - | chr3_2:26172665-26172684 | None:intergenic | 30.0% | |
| ATGAACAACGTTACAAAACA+AGG | - | chr3_2:26172666-26172685 | None:intergenic | 30.0% | |
| !!! | GTATTGATCATTTGGTTTTC+AGG | + | chr3_2:26172864-26172883 | Msa0401150:intron | 30.0% |
| AGCACTGTTATCACTATAAT+TGG | - | chr3_2:26173002-26173021 | None:intergenic | 30.0% | |
| ! | AACCTTTTCAGATTTGGATT+TGG | + | chr3_2:26173110-26173129 | Msa0401150:intron | 30.0% |
| TTCCAATCTTCATCTAACAA+TGG | + | chr3_2:26173253-26173272 | Msa0401150:intron | 30.0% | |
| GAAGCAATTTCCAATTGATA+TGG | + | chr3_2:26173394-26173413 | Msa0401150:intron | 30.0% | |
| AATTTCCAATTGATATGGCA+TGG | + | chr3_2:26173399-26173418 | Msa0401150:intron | 30.0% | |
| ACAAATACCACATCAGAAAA+AGG | - | chr3_2:26173498-26173517 | None:intergenic | 30.0% | |
| ! | TCTAATGATGTTCCTTTTTC+AGG | - | chr3_2:26173579-26173598 | None:intergenic | 30.0% |
| ! | AATCTTTCCATTTTGCAACA+AGG | + | chr3_2:26173668-26173687 | Msa0401150:CDS | 30.0% |
| ! | TAATTTTCTTCTGATGCAGA+TGG | + | chr3_2:26173755-26173774 | Msa0401150:intron | 30.0% |
| ! | AATTTTCTTCTGATGCAGAT+GGG | + | chr3_2:26173756-26173775 | Msa0401150:intron | 30.0% |
| !!! | TGTTTTTAGGTTTTGGATGT+TGG | + | chr3_2:26173957-26173976 | Msa0401150:intron | 30.0% |
| TAAGAGAAATTTCTCGATTC+AGG | + | chr3_2:26174000-26174019 | Msa0401150:intron | 30.0% | |
| !!! | TTTTAAAGCTTTATAGGTGC+TGG | + | chr3_2:26174582-26174601 | Msa0401150:intron | 30.0% |
| TCATGGTTGTGTGATAAAAA+TGG | - | chr3_2:26174630-26174649 | None:intergenic | 30.0% | |
| GTACTTATATGACAATCCTT+TGG | + | chr3_2:26174675-26174694 | Msa0401150:intron | 30.0% | |
| !! | TAGTCCCTCTAGAATAAATT+TGG | + | chr3_2:26174715-26174734 | Msa0401150:intron | 30.0% |
| AAGGCCAAATTTATTCTAGA+GGG | - | chr3_2:26174722-26174741 | None:intergenic | 30.0% | |
| TAAGGCCAAATTTATTCTAG+AGG | - | chr3_2:26174723-26174742 | None:intergenic | 30.0% | |
| !!! | GCCAGTTTTTTATGTTTAAC+AGG | + | chr3_2:26174833-26174852 | Msa0401150:intron | 30.0% |
| GCCTGTTAAACATAAAAAAC+TGG | - | chr3_2:26174837-26174856 | None:intergenic | 30.0% | |
| ! | CTTTGCATTGTGAGATTTTA+AGG | - | chr3_2:26175111-26175130 | None:intergenic | 30.0% |
| !! | AGTTTGTAAGTCTGGAATTT+TGG | + | chr3_2:26175129-26175148 | Msa0401150:intron | 30.0% |
| TTCCTAAAAGTTTCCACTTA+TGG | - | chr3_2:26175303-26175322 | None:intergenic | 30.0% | |
| GAAACACATTATATTCACCT+TGG | + | chr3_2:26175368-26175387 | Msa0401150:intron | 30.0% | |
| TTGAAAAAGGGGTAAACATT+AGG | + | chr3_2:26175471-26175490 | Msa0401150:intron | 30.0% | |
| TGAAAAAGGGGTAAACATTA+GGG | + | chr3_2:26175472-26175491 | Msa0401150:intron | 30.0% | |
| !! | TAAACATTAGGGTTTGCTTT+TGG | + | chr3_2:26175483-26175502 | Msa0401150:intron | 30.0% |
| TTGTAAAGACTCATTCATAG+TGG | + | chr3_2:26175531-26175550 | Msa0401150:intron | 30.0% | |
| ACTCTCTTATCTTTGTTCTT+TGG | + | chr3_2:26175634-26175653 | Msa0401150:intron | 30.0% | |
| !! | TTTGTTCTTTGGTTTGATTG+TGG | + | chr3_2:26175645-26175664 | Msa0401150:intron | 30.0% |
| ! | ATAGGTTGAATATTGTTGCT+TGG | + | chr3_2:26175700-26175719 | Msa0401150:intron | 30.0% |
| AAATGTGGAGCAAATAACAA+TGG | - | chr3_2:26175745-26175764 | None:intergenic | 30.0% | |
| TCAAAACTATTGTCTTCGAA+TGG | - | chr3_2:26175973-26175992 | None:intergenic | 30.0% | |
| AATATTTCACATACAGCATC+TGG | - | chr3_2:26176030-26176049 | None:intergenic | 30.0% | |
| CCAAAATAACTGACAATACA+TGG | - | chr3_2:26176122-26176141 | None:intergenic | 30.0% | |
| ! | CCATGTATTGTCAGTTATTT+TGG | + | chr3_2:26176119-26176138 | Msa0401150:intron | 30.0% |
| ! | ATTTATAGAGTGTTAAAGCC+TGG | + | chr3_2:26176330-26176349 | Msa0401150:CDS | 30.0% |
| ATTCATAAGCAGCAAAACAT+TGG | - | chr3_2:26176356-26176375 | None:intergenic | 30.0% | |
| !! | AATGTTTTGCTGCTTATGAA+TGG | + | chr3_2:26176355-26176374 | Msa0401150:CDS | 30.0% |
| !!! | TTTTGGTGTTCTTGGTTATT+GGG | - | chr3_2:26176402-26176421 | None:intergenic | 30.0% |
| !!! | TTTTTGGTGTTCTTGGTTAT+TGG | - | chr3_2:26176403-26176422 | None:intergenic | 30.0% |
| ! | CAGAAATTGAAATTGGTGAT+GGG | + | chr3_2:26176515-26176534 | Msa0401150:CDS | 30.0% |
| TGATCCTAAGAGATAATCTA+AGG | + | chr3_2:26176843-26176862 | Msa0401150:intron | 30.0% | |
| TGTACCTTAGATTATCTCTT+AGG | - | chr3_2:26176850-26176869 | None:intergenic | 30.0% | |
| ! | ATAAGCCTAATTGGCTTAAT+GGG | + | chr3_2:26176981-26177000 | Msa0401150:intron | 30.0% |
| ! | TTTTGTATGTGAAGGTCATA+TGG | + | chr3_2:26177016-26177035 | Msa0401150:intron | 30.0% |
| TTTGTATGTGAAGGTCATAT+GGG | + | chr3_2:26177017-26177036 | Msa0401150:intron | 30.0% | |
| !! | ATACCATATTTCTGGTGAAA+AGG | - | chr3_2:26177140-26177159 | None:intergenic | 30.0% |
| TTTCACATAGATCTCACTAT+GGG | - | chr3_2:26177287-26177306 | None:intergenic | 30.0% | |
| ATTTCACATAGATCTCACTA+TGG | - | chr3_2:26177288-26177307 | None:intergenic | 30.0% | |
| CAAACGATAATCAAATGTGT+TGG | + | chr3_2:26177309-26177328 | Msa0401150:intron | 30.0% | |
| ACTATTTCCATGAGACAAAT+GGG | - | chr3_2:26177586-26177605 | None:intergenic | 30.0% | |
| AACTATTTCCATGAGACAAA+TGG | - | chr3_2:26177587-26177606 | None:intergenic | 30.0% | |
| !!! | AAGGCGATTTTTTAACTGTT+AGG | + | chr3_2:26177657-26177676 | Msa0401150:intron | 30.0% |
| GTTAAATACAGATATCTCAC+TGG | - | chr3_2:26177796-26177815 | None:intergenic | 30.0% | |
| CAAAAATAAGGCAATCCAAA+CGG | - | chr3_2:26177972-26177991 | None:intergenic | 30.0% | |
| ! | TTCTGAAAAAACAGCTTATG+AGG | - | chr3_2:26178071-26178090 | None:intergenic | 30.0% |
| AAAAAATAAGTCGATCCAAG+CGG | + | chr3_2:26178160-26178179 | Msa0401150:intron | 30.0% | |
| ! | CTTGCTTATGTTATCTTTTC+AGG | + | chr3_2:26178375-26178394 | Msa0401150:intron | 30.0% |
| ACTGAATAAGTGGAACAAAT+AGG | + | chr3_2:26178456-26178475 | Msa0401150:exon | 30.0% | |
| TTATGAGTTACTGTGATTCT+AGG | + | chr3_2:26178488-26178507 | Msa0401150:three_prime_UTR | 30.0% | |
| TAAAACAGCAATACTTATGG+TGG | - | chr3_2:26178543-26178562 | None:intergenic | 30.0% | |
| ! | AACAAGTAACGTGAAGTTTT+TGG | - | chr3_2:26178588-26178607 | None:intergenic | 30.0% |
| ! | CCAGCTTTTACAGTTAAAAA+AGG | - | chr3_2:26178662-26178681 | None:intergenic | 30.0% |
| !!! | CCTTTTTTAACTGTAAAAGC+TGG | + | chr3_2:26178659-26178678 | Msa0401150:three_prime_UTR | 30.0% |
| AAGGAAAGAGGACAAAGATA+TGG | - | chr3_2:26170787-26170806 | None:intergenic | 35.0% | |
| AAGTGAAATGGGAGAGAAAA+TGG | - | chr3_2:26170899-26170918 | None:intergenic | 35.0% | |
| GTGTAATTTAGATCGAAACG+AGG | + | chr3_2:26170947-26170966 | Msa0401150:intron | 35.0% | |
| !! | ACCTTTTCAAGCAATGGATT+TGG | + | chr3_2:26170992-26171011 | Msa0401150:exon | 35.0% |
| TCAAGAATCTCTATGATGCT+GGG | + | chr3_2:26171403-26171422 | Msa0401150:intron | 35.0% | |
| TCTTACTTAGACTAGATCCA+AGG | - | chr3_2:26171556-26171575 | None:intergenic | 35.0% | |
| !! | GTGTATAGCTTTGAACTTTG+GGG | + | chr3_2:26171582-26171601 | Msa0401150:intron | 35.0% |
| !!! | CTTTTTTTATCCAACACCAC+AGG | - | chr3_2:26171703-26171722 | None:intergenic | 35.0% |
| CAACAATATGATGTTAGGTG+AGG | - | chr3_2:26171900-26171919 | None:intergenic | 35.0% | |
| TATCATCTCTAGCAAAGTCT+AGG | - | chr3_2:26171940-26171959 | None:intergenic | 35.0% | |
| !! | ACCGTTTGATTTTGATCAGA+CGG | + | chr3_2:26171997-26172016 | Msa0401150:intron | 35.0% |
| TCAGATGAAGATAGTCAGAT+CGG | + | chr3_2:26172088-26172107 | Msa0401150:intron | 35.0% | |
| TGGTGTGTATTGAATTGGAT+TGG | + | chr3_2:26172179-26172198 | Msa0401150:intron | 35.0% | |
| ! | CAACAATATGTTGGTAGGTA+AGG | - | chr3_2:26172226-26172245 | None:intergenic | 35.0% |
| ACTGACAACAATATGTTGGT+AGG | - | chr3_2:26172231-26172250 | None:intergenic | 35.0% | |
| CATTTATGTTGTTGTGGATC+TGG | + | chr3_2:26172300-26172319 | Msa0401150:intron | 35.0% | |
| ATCGTTCGATCTTGATCATA+TGG | + | chr3_2:26172323-26172342 | Msa0401150:intron | 35.0% | |
| TCGTTCGATCTTGATCATAT+GGG | + | chr3_2:26172324-26172343 | Msa0401150:intron | 35.0% | |
| TTACAAAACAAGGGTCTGTT+TGG | - | chr3_2:26172656-26172675 | None:intergenic | 35.0% | |
| TGTATGACTGTAAATGTGTG+AGG | + | chr3_2:26172701-26172720 | Msa0401150:intron | 35.0% | |
| TGAGGTCAATTTCAATTAGC+AGG | + | chr3_2:26172719-26172738 | Msa0401150:intron | 35.0% | |
| GAGGTCAATTTCAATTAGCA+GGG | + | chr3_2:26172720-26172739 | Msa0401150:intron | 35.0% | |
| ! | AGCACTAACCTTTTCAGATT+TGG | + | chr3_2:26173104-26173123 | Msa0401150:intron | 35.0% |
| CACCAAATCCAAATCTGAAA+AGG | - | chr3_2:26173115-26173134 | None:intergenic | 35.0% | |
| !! | TTTCAGATTTGGATTTGGTG+CGG | + | chr3_2:26173115-26173134 | Msa0401150:intron | 35.0% |
| AGTCAACAAAACTCTGTTGT+TGG | + | chr3_2:26173162-26173181 | Msa0401150:intron | 35.0% | |
| CTCCATTGTTAGATGAAGAT+TGG | - | chr3_2:26173258-26173277 | None:intergenic | 35.0% | |
| ! | CAATGGAGATTTATTGACTG+TGG | + | chr3_2:26173270-26173289 | Msa0401150:intron | 35.0% |
| ! | TTTTCAACAGCAGACAATCT+AGG | + | chr3_2:26173305-26173324 | Msa0401150:intron | 35.0% |
| AATATAGCATGCATCTGACA+AGG | - | chr3_2:26173332-26173351 | None:intergenic | 35.0% | |
| TGTTTCCATGCCATATCAAT+TGG | - | chr3_2:26173407-26173426 | None:intergenic | 35.0% | |
| ATGGCATGGAAACAATATCA+TGG | + | chr3_2:26173413-26173432 | Msa0401150:intron | 35.0% | |
| ! | CTATCTTCCTTTTTCTGATG+TGG | + | chr3_2:26173488-26173507 | Msa0401150:intron | 35.0% |
| ! | TCGGTTTGATTACCTGAAAA+AGG | + | chr3_2:26173564-26173583 | Msa0401150:intron | 35.0% |
| ! | AAGCTTTTATGAGTTTGGCT+GGG | + | chr3_2:26173642-26173661 | Msa0401150:CDS | 35.0% |
| TAAGACCAAGTTGTAAAGCA+AGG | - | chr3_2:26173825-26173844 | None:intergenic | 35.0% | |
| AAAGATGAAAACCTTCTGTC+CGG | - | chr3_2:26173851-26173870 | None:intergenic | 35.0% | |
| ATCGCTGAGAATTTGTAAGA+TGG | - | chr3_2:26174038-26174057 | None:intergenic | 35.0% | |
| TAGCATTGTAGCATCACTAT+TGG | - | chr3_2:26174071-26174090 | None:intergenic | 35.0% | |
| TGCAGTATTATTGTCAATCG+CGG | - | chr3_2:26174223-26174242 | None:intergenic | 35.0% | |
| TCTTGTTAGGACAACAAAAC+TGG | - | chr3_2:26174266-26174285 | None:intergenic | 35.0% | |
| TCGCACTTGATTTATCAAGT+CGG | + | chr3_2:26174315-26174334 | Msa0401150:intron | 35.0% | |
| AACCATGATGCATTGTGTTT+AGG | + | chr3_2:26174642-26174661 | Msa0401150:intron | 35.0% | |
| GGTGTAACATTTATAACTGG+AGG | - | chr3_2:26174999-26175018 | None:intergenic | 35.0% | |
| CCAGGTGTAACATTTATAAC+TGG | - | chr3_2:26175002-26175021 | None:intergenic | 35.0% | |
| CCAGTTATAAATGTTACACC+TGG | + | chr3_2:26174999-26175018 | Msa0401150:intron | 35.0% | |
| CAATGCAAAGTTTGTAAGTC+TGG | + | chr3_2:26175121-26175140 | Msa0401150:intron | 35.0% | |
| AGAAGAATACGGCTGAAATA+TGG | - | chr3_2:26175256-26175275 | None:intergenic | 35.0% | |
| TAATCTTGAGAGACCATAAG+TGG | + | chr3_2:26175287-26175306 | Msa0401150:intron | 35.0% | |
| ! | GACCATAAGTGGAAACTTTT+AGG | + | chr3_2:26175298-26175317 | Msa0401150:intron | 35.0% |
| !! | GTGGAAACTTTTAGGAAACA+AGG | + | chr3_2:26175306-26175325 | Msa0401150:intron | 35.0% |
| !! | ACTTTTAGGAAACAAGGCTA+AGG | + | chr3_2:26175312-26175331 | Msa0401150:intron | 35.0% |
| !! | CTTTTAGGAAACAAGGCTAA+GGG | + | chr3_2:26175313-26175332 | Msa0401150:intron | 35.0% |
| !! | GCTAAGGGTTGATTACTTTT+GGG | + | chr3_2:26175328-26175347 | Msa0401150:intron | 35.0% |
| !! | TTACTTTTGGGTGAGATTCT+TGG | + | chr3_2:26175340-26175359 | Msa0401150:intron | 35.0% |
| !! | TACTTTTGGGTGAGATTCTT+GGG | + | chr3_2:26175341-26175360 | Msa0401150:intron | 35.0% |
| TTTCTCTCCTGATTTCTCTT+AGG | + | chr3_2:26175424-26175443 | Msa0401150:intron | 35.0% | |
| AGAAGATCCTAAGAGAAATC+AGG | - | chr3_2:26175434-26175453 | None:intergenic | 35.0% | |
| TGTTGAGAGAGACTTGAAAA+AGG | + | chr3_2:26175458-26175477 | Msa0401150:intron | 35.0% | |
| GTTGAGAGAGACTTGAAAAA+GGG | + | chr3_2:26175459-26175478 | Msa0401150:intron | 35.0% | |
| TTGAGAGAGACTTGAAAAAG+GGG | + | chr3_2:26175460-26175479 | Msa0401150:intron | 35.0% | |
| CTAAACTGGGTAAACAATCT+TGG | + | chr3_2:26175596-26175615 | Msa0401150:intron | 35.0% | |
| GAACAAAGATAAGAGAGTAG+AGG | - | chr3_2:26175632-26175651 | None:intergenic | 35.0% | |
| ! | TGTGGTTTTTCTATACACAC+AGG | + | chr3_2:26175663-26175682 | Msa0401150:intron | 35.0% |
| !! | CAGGTTGCTAGATTTGTTAT+AGG | + | chr3_2:26175682-26175701 | Msa0401150:intron | 35.0% |
| ! | ATATTGTTGCTTGGACTGTT+TGG | + | chr3_2:26175709-26175728 | Msa0401150:intron | 35.0% |
| AAGTCTCTACAGCCTTAATT+AGG | + | chr3_2:26176177-26176196 | Msa0401150:intron | 35.0% | |
| !!! | CCTTGATTTTTTGGTGTTCT+TGG | - | chr3_2:26176410-26176429 | None:intergenic | 35.0% |
| CCAAGAACACCAAAAAATCA+AGG | + | chr3_2:26176407-26176426 | Msa0401150:CDS | 35.0% | |
| GCAGAAATTGAAATTGGTGA+TGG | + | chr3_2:26176514-26176533 | Msa0401150:CDS | 35.0% | |
| TTTGTGGTCAATCTAATGTC+AGG | - | chr3_2:26176544-26176563 | None:intergenic | 35.0% | |
| TAAGACTGTAAACTTACCCT+AGG | + | chr3_2:26176871-26176890 | Msa0401150:intron | 35.0% | |
| AAGACTGTAAACTTACCCTA+GGG | + | chr3_2:26176872-26176891 | Msa0401150:intron | 35.0% | |
| ATATCTTGGTTTATCCCCTA+GGG | - | chr3_2:26176890-26176909 | None:intergenic | 35.0% | |
| AATATCTTGGTTTATCCCCT+AGG | - | chr3_2:26176891-26176910 | None:intergenic | 35.0% | |
| ! | GATAAGCCTAATTGGCTTAA+TGG | + | chr3_2:26176980-26176999 | Msa0401150:intron | 35.0% |
| AAACTCCCATTAAGCCAATT+AGG | - | chr3_2:26176989-26177008 | None:intergenic | 35.0% | |
| CAGAAGCAATACCATATTTC+TGG | - | chr3_2:26177148-26177167 | None:intergenic | 35.0% | |
| ! | TGCACATAGCTGAGAATTTT+CGG | + | chr3_2:26177385-26177404 | Msa0401150:intron | 35.0% |
| ! | TTTTCGTGCTCAAAACTCAA+TGG | + | chr3_2:26177417-26177436 | Msa0401150:intron | 35.0% |
| CTCAAAACTCAATGGTTGTT+TGG | + | chr3_2:26177425-26177444 | Msa0401150:intron | 35.0% | |
| ATTTCGACATGTCAACCAAA+GGG | - | chr3_2:26178187-26178206 | None:intergenic | 35.0% | |
| TATTTCGACATGTCAACCAA+AGG | - | chr3_2:26178188-26178207 | None:intergenic | 35.0% | |
| !! | TTTTAAAGATGGTGCACTGT+TGG | - | chr3_2:26178255-26178274 | None:intergenic | 35.0% |
| AAGTTGTGTTAGAGAAAACG+CGG | - | chr3_2:26178358-26178377 | None:intergenic | 35.0% | |
| ! | CACACCAATGTACTTCTTTT+TGG | + | chr3_2:26178409-26178428 | Msa0401150:CDS | 35.0% |
| !! | CAATGTACTTCTTTTTGGCA+CGG | + | chr3_2:26178414-26178433 | Msa0401150:CDS | 35.0% |
| TCAGAAAGCAACTGAATAAG+TGG | + | chr3_2:26178446-26178465 | Msa0401150:exon | 35.0% | |
| GAATCTATCAATTTAACGGC+CGG | - | chr3_2:26178742-26178761 | None:intergenic | 35.0% | |
| ATAAAGATGGTGAACTCACG+TGG | - | chr3_2:26170865-26170884 | None:intergenic | 40.0% | |
| GCCAAATCCATTGCTTGAAA+AGG | - | chr3_2:26170996-26171015 | None:intergenic | 40.0% | |
| ! | ATGGATTTGGCTTCGAATCT+CGG | + | chr3_2:26171005-26171024 | Msa0401150:CDS | 40.0% |
| CTCAAGAATCTCTATGATGC+TGG | + | chr3_2:26171402-26171421 | Msa0401150:intron | 40.0% | |
| AAGCAATAATCCTGTGGTGT+TGG | + | chr3_2:26171690-26171709 | Msa0401150:intron | 40.0% | |
| AAATCAGAATCATTCCACGC+AGG | - | chr3_2:26171788-26171807 | None:intergenic | 40.0% | |
| TCAGCAGCAAAATCCAAAAC+TGG | - | chr3_2:26171872-26171891 | None:intergenic | 40.0% | |
| ! | GTTACATGTTCGCTTTGTTG+CGG | + | chr3_2:26171968-26171987 | Msa0401150:intron | 40.0% |
| CCCGTCTGATCAAAATCAAA+CGG | - | chr3_2:26172001-26172020 | None:intergenic | 40.0% | |
| !! | CCGTTTGATTTTGATCAGAC+GGG | + | chr3_2:26171998-26172017 | Msa0401150:intron | 40.0% |
| !! | CGTTTGATTTTGATCAGACG+GGG | + | chr3_2:26171999-26172018 | Msa0401150:intron | 40.0% |
| CGTTCGATCTTGATCATATG+GGG | + | chr3_2:26172325-26172344 | Msa0401150:intron | 40.0% | |
| ! | ACACTGTTCAGGTTAACTTG+AGG | - | chr3_2:26172753-26172772 | None:intergenic | 40.0% |
| !! | GAGAAGTATCATGCATCCTA+TGG | + | chr3_2:26172890-26172909 | Msa0401150:CDS | 40.0% |
| AAGTATCATGCATCCTATGG+AGG | + | chr3_2:26172893-26172912 | Msa0401150:CDS | 40.0% | |
| ! | GCGACAAGCTTTTATGAGTT+TGG | + | chr3_2:26173637-26173656 | Msa0401150:CDS | 40.0% |
| ! | CAAGCTTTTATGAGTTTGGC+TGG | + | chr3_2:26173641-26173660 | Msa0401150:CDS | 40.0% |
| ! | AGCTTTTATGAGTTTGGCTG+GGG | + | chr3_2:26173643-26173662 | Msa0401150:CDS | 40.0% |
| ATGGACACCTTGTTGCAAAA+TGG | - | chr3_2:26173678-26173697 | None:intergenic | 40.0% | |
| CACTTCCTTGCTTTACAACT+TGG | + | chr3_2:26173817-26173836 | Msa0401150:CDS | 40.0% | |
| !! | TTACAACTTGGTCTTAAGCC+CGG | + | chr3_2:26173829-26173848 | Msa0401150:CDS | 40.0% |
| AAGATGAAAACCTTCTGTCC+GGG | - | chr3_2:26173850-26173869 | None:intergenic | 40.0% | |
| !!! | TAGGTTTTGGATGTTGGTTG+TGG | + | chr3_2:26173963-26173982 | Msa0401150:intron | 40.0% |
| ! | TTGGATGTTGGTTGTGGTAT+TGG | + | chr3_2:26173969-26173988 | Msa0401150:intron | 40.0% |
| ! | TGGATGTTGGTTGTGGTATT+GGG | + | chr3_2:26173970-26173989 | Msa0401150:intron | 40.0% |
| GCTACAATGCTAAAGCATGA+TGG | + | chr3_2:26174079-26174098 | Msa0401150:intron | 40.0% | |
| CAAAAGACGAGGAAACATAG+AGG | - | chr3_2:26174388-26174407 | None:intergenic | 40.0% | |
| TGCCTAAACACAATGCATCA+TGG | - | chr3_2:26174647-26174666 | None:intergenic | 40.0% | |
| ! | GGGTTGAAAAATGGGGTTTT+AGG | + | chr3_2:26175177-26175196 | Msa0401150:intron | 40.0% |
| !! | GGCTAAGGGTTGATTACTTT+TGG | + | chr3_2:26175327-26175346 | Msa0401150:intron | 40.0% |
| !! | AAGACTCATTCATAGTGGAC+CGG | + | chr3_2:26175536-26175555 | Msa0401150:intron | 40.0% |
| CCAAATTGACCTACATCTAG+GGG | - | chr3_2:26175575-26175594 | None:intergenic | 40.0% | |
| CCCAAATTGACCTACATCTA+GGG | - | chr3_2:26175576-26175595 | None:intergenic | 40.0% | |
| CCCTAGATGTAGGTCAATTT+GGG | + | chr3_2:26175573-26175592 | Msa0401150:intron | 40.0% | |
| TAGGTCAATTTGGGCTAAAC+TGG | + | chr3_2:26175582-26175601 | Msa0401150:intron | 40.0% | |
| AGGTCAATTTGGGCTAAACT+GGG | + | chr3_2:26175583-26175602 | Msa0401150:intron | 40.0% | |
| !!! | TGCTTGGACTGTTTGGTTTT+TGG | + | chr3_2:26175716-26175735 | Msa0401150:intron | 40.0% |
| TTGGATCAAGACTGTGATTC+TGG | + | chr3_2:26176138-26176157 | Msa0401150:intron | 40.0% | |
| CTGTAGAGACTTCAAAAACC+TGG | - | chr3_2:26176169-26176188 | None:intergenic | 40.0% | |
| CAAGTGTGAAGGCCTAATTA+AGG | - | chr3_2:26176192-26176211 | None:intergenic | 40.0% | |
| AATATTGCGGTCAAGTGTGA+AGG | - | chr3_2:26176203-26176222 | None:intergenic | 40.0% | |
| AAGACAAAATTCCTTGCTGC+AGG | + | chr3_2:26176492-26176511 | Msa0401150:intron | 40.0% | |
| CTGCAGGCAGAAATTGAAAT+TGG | + | chr3_2:26176508-26176527 | Msa0401150:intron | 40.0% | |
| TAGAGCTTCAAGACACTTTG+TGG | - | chr3_2:26176560-26176579 | None:intergenic | 40.0% | |
| !! | TCTAAAGCAAGCAGGTTTTG+AGG | + | chr3_2:26176576-26176595 | Msa0401150:CDS | 40.0% |
| AGACTGTAAACTTACCCTAG+GGG | + | chr3_2:26176873-26176892 | Msa0401150:intron | 40.0% | |
| TTGTCTAAAGGCAAGTACCA+CGG | - | chr3_2:26177072-26177091 | None:intergenic | 40.0% | |
| GAGAAGTGACTCTTGTCTAA+AGG | - | chr3_2:26177084-26177103 | None:intergenic | 40.0% | |
| ! | ACGCCTTTTCACCAGAAATA+TGG | + | chr3_2:26177134-26177153 | Msa0401150:CDS | 40.0% |
| ! | GTTACTCGGTGAAATGAATG+TGG | + | chr3_2:26177253-26177272 | Msa0401150:intron | 40.0% |
| ACATTTGTAGGTTAAGGCTC+TGG | + | chr3_2:26177460-26177479 | Msa0401150:intron | 40.0% | |
| GGTTCAAGATTTCCTTGAGA+AGG | + | chr3_2:26177517-26177536 | Msa0401150:CDS | 40.0% | |
| CTCAATTCCCATTTGTCTCA+TGG | + | chr3_2:26177576-26177595 | Msa0401150:intron | 40.0% | |
| AACTGTTAGGTCTCTACTCT+TGG | + | chr3_2:26177670-26177689 | Msa0401150:intron | 40.0% | |
| ! | CGTGCCAAAAAGAAGTACAT+TGG | - | chr3_2:26178416-26178435 | None:intergenic | 40.0% |
| !! | ATTCAGTTGCTTTCTGAAGC+AGG | - | chr3_2:26178443-26178462 | None:intergenic | 40.0% |
| ACTACACTATCCACTAATGC+AGG | - | chr3_2:26178629-26178648 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGAGGTTTAG+AGG | - | chr3_2:26170828-26170847 | None:intergenic | 45.0% | |
| TATTCAAAACCACCGAGAGC+TGG | + | chr3_2:26171845-26171864 | Msa0401150:intron | 45.0% | |
| ! | TGTTCGCTTTGTTGCGGATT+TGG | + | chr3_2:26171974-26171993 | Msa0401150:intron | 45.0% |
| GAAGATAGTCAGATCGGTAG+AGG | + | chr3_2:26172094-26172113 | Msa0401150:intron | 45.0% | |
| TTGTAAACTTGGGCCCTGTT+TGG | + | chr3_2:26172367-26172386 | Msa0401150:intron | 45.0% | |
| TTCATCCTCTTGACCTCCAT+AGG | - | chr3_2:26172909-26172928 | None:intergenic | 45.0% | |
| ATGGAGGTCAAGAGGATGAA+AGG | + | chr3_2:26172909-26172928 | Msa0401150:CDS | 45.0% | |
| ! | TGTTGACTGATGAAGCTGTG+TGG | - | chr3_2:26173150-26173169 | None:intergenic | 45.0% |
| ! | GCTTTTATGAGTTTGGCTGG+GGG | + | chr3_2:26173644-26173663 | Msa0401150:CDS | 45.0% |
| ! | CTTTTATGAGTTTGGCTGGG+GGG | + | chr3_2:26173645-26173664 | Msa0401150:CDS | 45.0% |
| TTCTTCTGATGCAGATGGGT+AGG | + | chr3_2:26173760-26173779 | Msa0401150:intron | 45.0% | |
| TCTTCTGATGCAGATGGGTA+GGG | + | chr3_2:26173761-26173780 | Msa0401150:intron | 45.0% | |
| ! | GGATGTTGGTTGTGGTATTG+GGG | + | chr3_2:26173971-26173990 | Msa0401150:intron | 45.0% |
| ! | GATGTTGGTTGTGGTATTGG+GGG | + | chr3_2:26173972-26173991 | Msa0401150:intron | 45.0% |
| GCATCACTATTGGACAGCAT+TGG | - | chr3_2:26174061-26174080 | None:intergenic | 45.0% | |
| GGACAACAAAACTGGCAACT+AGG | - | chr3_2:26174258-26174277 | None:intergenic | 45.0% | |
| GCGAGTCATCTGATCTTGTT+AGG | - | chr3_2:26174279-26174298 | None:intergenic | 45.0% | |
| GATTCTGACTGCAGGGAATT+TGG | + | chr3_2:26174356-26174375 | Msa0401150:intron | 45.0% | |
| AGACGAGGAAACATAGAGGA+TGG | - | chr3_2:26174384-26174403 | None:intergenic | 45.0% | |
| ACAAGGAAGAGCAAAAGACG+AGG | - | chr3_2:26174399-26174418 | None:intergenic | 45.0% | |
| ATAACGAGTACCAGATCACC+AGG | + | chr3_2:26174495-26174514 | Msa0401150:CDS | 45.0% | |
| TAACGAGTACCAGATCACCA+GGG | + | chr3_2:26174496-26174515 | Msa0401150:CDS | 45.0% | |
| CAAAACACATACCTTTCCCC+TGG | - | chr3_2:26174516-26174535 | None:intergenic | 45.0% | |
| ACTCAATCGCAAAACTGGAG+TGG | + | chr3_2:26174857-26174876 | Msa0401150:CDS | 45.0% | |
| CAAGACTTGCAACTTCGTCA+AGG | + | chr3_2:26174881-26174900 | Msa0401150:CDS | 45.0% | |
| ACTTGCAACTTCGTCAAGGT+CGG | + | chr3_2:26174885-26174904 | Msa0401150:intron | 45.0% | |
| TTTGGGTGAGATTCTTGGGT+TGG | + | chr3_2:26175345-26175364 | Msa0401150:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | + | chr3_2:26175346-26175365 | Msa0401150:intron | 45.0% | |
| TGATGAGATCTCACTACCCA+AGG | - | chr3_2:26175388-26175407 | None:intergenic | 45.0% | |
| AGTGAGATCTCATCAGAGGA+AGG | + | chr3_2:26175393-26175412 | Msa0401150:intron | 45.0% | |
| CCCCTAGATGTAGGTCAATT+TGG | + | chr3_2:26175572-26175591 | Msa0401150:intron | 45.0% | |
| GCCCAAATTGACCTACATCT+AGG | - | chr3_2:26175577-26175596 | None:intergenic | 45.0% | |
| AATGCTGAAGAGAGAGCTTC+TGG | + | chr3_2:26175817-26175836 | Msa0401150:intron | 45.0% | |
| ATCAAGACTGTGATTCTGGC+TGG | + | chr3_2:26176142-26176161 | Msa0401150:intron | 45.0% | |
| TAAGCAGCAAAACATTGGCC+AGG | - | chr3_2:26176351-26176370 | None:intergenic | 45.0% | |
| TTCAATTTCTGCCTGCAGCA+AGG | - | chr3_2:26176506-26176525 | None:intergenic | 45.0% | |
| !! | CTTGAAGCTCTAAAGCAAGC+AGG | + | chr3_2:26176568-26176587 | Msa0401150:CDS | 45.0% |
| GGTCATATGGGAGAAAGATC+TGG | + | chr3_2:26177029-26177048 | Msa0401150:intron | 45.0% | |
| ACTTAGCAGCTTCCGTCTTA+CGG | + | chr3_2:26177104-26177123 | Msa0401150:CDS | 45.0% | |
| !! | GTTAAGGCTCTGGAGTTTGT+TGG | + | chr3_2:26177470-26177489 | Msa0401150:CDS | 45.0% |
| ! | TTTGTTGGACTTGCTCCGAA+GGG | + | chr3_2:26177485-26177504 | Msa0401150:CDS | 45.0% |
| GTACAAGAGTTAAGGCCGTT+TGG | + | chr3_2:26177954-26177973 | Msa0401150:intron | 45.0% | |
| CAATGTGCTTCCTGCATTAG+TGG | + | chr3_2:26178616-26178635 | Msa0401150:three_prime_UTR | 45.0% | |
| !!! | CATTATTAATTTTAAAATTA+TGG | + | chr3_2:26177932-26177951 | Msa0401150:intron | 5.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3_2:26170834-26170853 | None:intergenic | 50.0% | |
| ! | GATTTGGCTTCGAATCTCGG+TGG | + | chr3_2:26171008-26171027 | Msa0401150:CDS | 50.0% |
| GAGAGTGACGCACTTATCGA+CGG | - | chr3_2:26171063-26171082 | None:intergenic | 50.0% | |
| CCACGCAGGATGATAAAGAC+TGG | - | chr3_2:26171774-26171793 | None:intergenic | 50.0% | |
| CCAGTCTTTATCATCCTGCG+TGG | + | chr3_2:26171771-26171790 | Msa0401150:intron | 50.0% | |
| TCCAAAACTGGACCAGCTCT+CGG | - | chr3_2:26171860-26171879 | None:intergenic | 50.0% | |
| TGCATCCTATGGAGGTCAAG+AGG | + | chr3_2:26172901-26172920 | Msa0401150:CDS | 50.0% | |
| CTTCTGATGCAGATGGGTAG+GGG | + | chr3_2:26173762-26173781 | Msa0401150:intron | 50.0% | |
| AACAGCGTGATTCTGACTGC+AGG | + | chr3_2:26174348-26174367 | Msa0401150:intron | 50.0% | |
| ACAGCGTGATTCTGACTGCA+GGG | + | chr3_2:26174349-26174368 | Msa0401150:intron | 50.0% | |
| TGCAGCTCGACATCTGTTAC+AGG | + | chr3_2:26174464-26174483 | Msa0401150:intron | 50.0% | |
| AACGAGTACCAGATCACCAG+GGG | + | chr3_2:26174497-26174516 | Msa0401150:CDS | 50.0% | |
| ATACCTTTCCCCTGGTGATC+TGG | - | chr3_2:26174508-26174527 | None:intergenic | 50.0% | |
| CAGGCACTCAATCGCAAAAC+TGG | + | chr3_2:26174852-26174871 | Msa0401150:intron | 50.0% | |
| !! | TGCGAGGCGGGTTGAAAAAT+GGG | + | chr3_2:26175169-26175188 | Msa0401150:intron | 50.0% |
| GGGTAGTGAGATCTCATCAG+AGG | + | chr3_2:26175389-26175408 | Msa0401150:intron | 50.0% | |
| CACATACAGCATCTGGTGCA+TGG | - | chr3_2:26176023-26176042 | None:intergenic | 50.0% | |
| AAAGGCAAGTACCACGGAAG+AGG | - | chr3_2:26177066-26177085 | None:intergenic | 50.0% | |
| ! | GTTTGTTGGACTTGCTCCGA+AGG | + | chr3_2:26177484-26177503 | Msa0401150:CDS | 50.0% |
| ! | TTGTTGGACTTGCTCCGAAG+GGG | + | chr3_2:26177486-26177505 | Msa0401150:CDS | 50.0% |
| TGAACCCTTTGACTCCCCTT+CGG | - | chr3_2:26177503-26177522 | None:intergenic | 50.0% | |
| TTTCCTTGAGAAGGCTGCAG+AGG | + | chr3_2:26177526-26177545 | Msa0401150:CDS | 50.0% | |
| TTCCTTGAGAAGGCTGCAGA+GGG | + | chr3_2:26177527-26177546 | Msa0401150:CDS | 50.0% | |
| AGTGACGCACTTATCGACGG+CGG | - | chr3_2:26171060-26171079 | None:intergenic | 55.0% | |
| AAAACTGGACCAGCTCTCGG+TGG | - | chr3_2:26171857-26171876 | None:intergenic | 55.0% | |
| ! | ACCGAGAGCTGGTCCAGTTT+TGG | + | chr3_2:26171856-26171875 | Msa0401150:intron | 55.0% |
| ! | ATCAGACGGGGTCCACGTTT+TGG | + | chr3_2:26172011-26172030 | Msa0401150:intron | 55.0% |
| ! | AGTCAGATCGGTAGAGGCGT+AGG | + | chr3_2:26172100-26172119 | Msa0401150:intron | 55.0% |
| ! | TGGTCTTAAGCCCGGACAGA+AGG | + | chr3_2:26173837-26173856 | Msa0401150:CDS | 55.0% |
| GTACCAGATCACCAGGGGAA+AGG | + | chr3_2:26174502-26174521 | Msa0401150:CDS | 55.0% | |
| TTTCAACCCGCCTCGCAGAT+GGG | - | chr3_2:26175166-26175185 | None:intergenic | 55.0% | |
| ! | TTTTCAACCCGCCTCGCAGA+TGG | - | chr3_2:26175167-26175186 | None:intergenic | 55.0% |
| !! | CTGCGAGGCGGGTTGAAAAA+TGG | + | chr3_2:26175168-26175187 | Msa0401150:intron | 55.0% |
| !! | GCGAGGCGGGTTGAAAAATG+GGG | + | chr3_2:26175170-26175189 | Msa0401150:intron | 55.0% |
| TTGACACTGTGTCATCCGCG+AGG | + | chr3_2:26175204-26175223 | Msa0401150:intron | 55.0% | |
| CTGCTCTCTCCCCTAGATGT+AGG | + | chr3_2:26175563-26175582 | Msa0401150:intron | 55.0% | |
| TACAGCATCTGGTGCATGGC+AGG | - | chr3_2:26176019-26176038 | None:intergenic | 55.0% | |
| ! | ACTGTGATTCTGGCTGGTCC+AGG | + | chr3_2:26176148-26176167 | Msa0401150:intron | 55.0% |
| CATCAGACTCTCCTCTTCCG+TGG | + | chr3_2:26177052-26177071 | Msa0401150:CDS | 55.0% | |
| AGCTTCCGTCTTACGGCTGT+TGG | + | chr3_2:26177111-26177130 | Msa0401150:CDS | 55.0% | |
| TTGCTCCGAAGGGGAGTCAA+AGG | + | chr3_2:26177495-26177514 | Msa0401150:CDS | 55.0% | |
| TGCTCCGAAGGGGAGTCAAA+GGG | + | chr3_2:26177496-26177515 | Msa0401150:CDS | 55.0% | |
| GCTGCAGAGGGTCTAGTTGA+AGG | + | chr3_2:26177539-26177558 | Msa0401150:CDS | 55.0% | |
| GCAGAGGGTCTAGTTGAAGG+TGG | + | chr3_2:26177542-26177561 | Msa0401150:CDS | 55.0% | |
| TGTCAACCAAAGGGTCCGCT+TGG | - | chr3_2:26178178-26178197 | None:intergenic | 55.0% | |
| ATGCCTCTGTCCCATCTGCG+AGG | + | chr3_2:26175153-26175172 | Msa0401150:intron | 60.0% | |
| ACCCGGAAGAACGTTGCAGC+AGG | + | chr3_2:26175228-26175247 | Msa0401150:intron | 60.0% | |
| GCCTGCTGCAACGTTCTTCC+GGG | - | chr3_2:26175232-26175251 | None:intergenic | 60.0% | |
| CGCCTGCTGCAACGTTCTTC+CGG | - | chr3_2:26175233-26175252 | None:intergenic | 60.0% | |
| TAGGGGAGAGAGCAGCTCTC+CGG | - | chr3_2:26175558-26175577 | None:intergenic | 60.0% | |
| AGCATCTGGTGCATGGCAGG+TGG | - | chr3_2:26176016-26176035 | None:intergenic | 60.0% | |
| GGCGTCCAACAGCCGTAAGA+CGG | - | chr3_2:26177119-26177138 | None:intergenic | 60.0% | |
| GACCCTCTGCAGCCTTCTCA+AGG | - | chr3_2:26177532-26177551 | None:intergenic | 60.0% | |
| GTCGATCCAAGCGGACCCTT+TGG | + | chr3_2:26178169-26178188 | Msa0401150:intron | 60.0% | |
| CCTCTGTCCCATCTGCGAGG+CGG | + | chr3_2:26175156-26175175 | Msa0401150:intron | 65.0% | |
| CTCTGTCCCATCTGCGAGGC+GGG | + | chr3_2:26175157-26175176 | Msa0401150:intron | 65.0% | |
| ! | TGTGTCATCCGCGAGGCACC+CGG | + | chr3_2:26175211-26175230 | Msa0401150:intron | 65.0% |
| ACGTTCTTCCGGGTGCCTCG+CGG | - | chr3_2:26175222-26175241 | None:intergenic | 65.0% | |
| CCGCCTCGCAGATGGGACAG+AGG | - | chr3_2:26175159-26175178 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 26170776 | 26178801 | 26170776 | ID=Msa0401150;Name=Msa0401150 |
| chr3_2 | mRNA | 26170776 | 26178801 | 26170776 | ID=Msa0401150-mRNA-1;Parent=Msa0401150;Name=Msa0401150-mRNA-1;_AED=0.15;_eAED=0.15;_QI=137|0.92|0.85|1|0.84|0.71|14|341|322 |
| chr3_2 | exon | 26170776 | 26170865 | 26170776 | ID=Msa0401150-mRNA-1:exon:5474;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26170958 | 26171069 | 26170958 | ID=Msa0401150-mRNA-1:exon:5475;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26172886 | 26172952 | 26172886 | ID=Msa0401150-mRNA-1:exon:5476;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26173616 | 26173689 | 26173616 | ID=Msa0401150-mRNA-1:exon:5477;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26173774 | 26173858 | 26173774 | ID=Msa0401150-mRNA-1:exon:5478;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26173966 | 26173984 | 26173966 | ID=Msa0401150-mRNA-1:exon:5479;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26174486 | 26174523 | 26174486 | ID=Msa0401150-mRNA-1:exon:5480;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26174855 | 26174902 | 26174855 | ID=Msa0401150-mRNA-1:exon:5481;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26175952 | 26176035 | 26175952 | ID=Msa0401150-mRNA-1:exon:5482;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26176312 | 26176428 | 26176312 | ID=Msa0401150-mRNA-1:exon:5483;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26176514 | 26176597 | 26176514 | ID=Msa0401150-mRNA-1:exon:5484;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26177030 | 26177155 | 26177030 | ID=Msa0401150-mRNA-1:exon:5485;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26177470 | 26177567 | 26177470 | ID=Msa0401150-mRNA-1:exon:5486;Parent=Msa0401150-mRNA-1 |
| chr3_2 | exon | 26178397 | 26178801 | 26178397 | ID=Msa0401150-mRNA-1:exon:5487;Parent=Msa0401150-mRNA-1 |
| chr3_2 | five_prime_UTR | 26170776 | 26170865 | 26170776 | ID=Msa0401150-mRNA-1:five_prime_utr;Parent=Msa0401150-mRNA-1 |
| chr3_2 | five_prime_UTR | 26170958 | 26171004 | 26170958 | ID=Msa0401150-mRNA-1:five_prime_utr;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26171005 | 26171069 | 26171005 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26172886 | 26172952 | 26172886 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26173616 | 26173689 | 26173616 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26173774 | 26173858 | 26173774 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26173966 | 26173984 | 26173966 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26174486 | 26174523 | 26174486 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26174855 | 26174902 | 26174855 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26175952 | 26176035 | 26175952 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26176312 | 26176428 | 26176312 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26176514 | 26176597 | 26176514 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26177030 | 26177155 | 26177030 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26177470 | 26177567 | 26177470 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | CDS | 26178397 | 26178460 | 26178397 | ID=Msa0401150-mRNA-1:cds;Parent=Msa0401150-mRNA-1 |
| chr3_2 | three_prime_UTR | 26178461 | 26178801 | 26178461 | ID=Msa0401150-mRNA-1:three_prime_utr;Parent=Msa0401150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
