AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0426800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426800 MtrunA17_Chr4g0018781 72.727 99 16 2 2 100 14 101 1.15e-44 140
Msa0426800 MtrunA17_Chr4g0018441 63.636 99 24 2 2 100 77 163 3.74e-34 120
Msa0426800 MtrunA17_Chr3g0079281 52.941 102 35 3 1 101 82 171 3.68e-26 99.8
Msa0426800 MtrunA17_Chr3g0126491 53.030 66 31 0 36 101 75 140 1.19e-15 70.5
Msa0426800 MtrunA17_Chr8g0347141 43.023 86 37 2 15 100 22 95 1.77e-14 67.0
Msa0426800 MtrunA17_Chr4g0056481 49.231 65 33 0 36 100 104 168 3.42e-14 66.6
Msa0426800 MtrunA17_Chr8g0382441 50.794 63 31 0 36 98 88 150 4.43e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426800 AT5G51460.1 47.674 86 34 2 15 100 94 168 1.40e-18 79.3
Msa0426800 AT5G51460.5 47.674 86 34 2 15 100 94 168 1.40e-18 79.3
Msa0426800 AT5G51460.3 47.674 86 34 2 15 100 94 168 1.40e-18 79.3
Msa0426800 AT5G51460.2 58.462 65 27 0 36 100 103 167 1.41e-18 79.3
Msa0426800 AT5G51460.4 58.462 65 27 0 36 100 103 167 1.41e-18 79.3
Msa0426800 AT1G35910.1 43.478 92 40 3 9 100 81 160 7.82e-16 71.6
Msa0426800 AT4G22590.1 55.714 70 28 2 31 100 89 155 5.63e-15 69.3
Msa0426800 AT1G78090.1 41.111 90 41 2 10 99 87 164 8.56e-13 63.2
Msa0426800 AT1G78090.2 41.111 90 41 2 10 99 87 164 1.11e-12 62.8
Msa0426800 AT5G65140.2 47.619 63 33 0 36 98 99 161 3.66e-12 61.2
Msa0426800 AT5G10100.1 47.619 63 33 0 36 98 107 169 4.43e-12 60.8
Msa0426800 AT5G10100.4 47.619 63 33 0 36 98 107 169 4.63e-12 60.8
Msa0426800 AT5G10100.3 47.619 63 33 0 36 98 96 158 4.87e-12 60.8
Msa0426800 AT5G65140.3 47.619 63 33 0 36 98 99 161 4.98e-12 60.8
Msa0426800 AT5G10100.2 47.619 63 33 0 36 98 96 158 6.11e-12 60.5
Msa0426800 AT5G65140.1 47.619 63 33 0 36 98 99 161 1.81e-11 59.3
Msa0426800 AT4G39770.1 46.032 63 34 0 36 98 74 136 3.90e-11 58.2
Msa0426800 AT2G22190.2 43.939 66 37 0 36 101 82 147 3.92e-11 58.2
Msa0426800 AT4G12430.1 60.870 46 18 0 55 100 107 152 4.85e-11 58.2
Msa0426800 AT2G22190.1 43.939 66 37 0 36 101 82 147 5.07e-11 57.8
Msa0426800 AT4G39770.2 46.032 63 34 0 36 98 74 136 5.10e-11 57.8

Find 295 sgRNAs with CRISPR-Local

Find 782 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGAAGATGATGCCTTTA+AGG 0.122362 3_2:+77423476 Msa0426800:five_prime_UTR
AGCTATTCCTCTCTTATTAA+TGG 0.136743 3_2:+77422679 Msa0426800:five_prime_UTR
CCATATACAATTCTACTTAT+TGG 0.138703 3_2:+77423750 Msa0426800:five_prime_UTR
CAAAATAATTGCACTGCTTT+TGG 0.165089 3_2:+77428927 Msa0426800:CDS
ACGGGCATTCAGTCTTTATT+TGG 0.167173 3_2:+77423590 Msa0426800:five_prime_UTR
TCTTGTAATGTTGTTCTTAA+TGG 0.177823 3_2:+77422574 None:intergenic
CCTTCGCACATGTGAGTTTC+TGG 0.183651 3_2:+77430021 Msa0426800:three_prime_UTR
AAGTAAATACTTAATGTTAT+TGG 0.191680 3_2:+77434792 Msa0426800:three_prime_UTR
CAAAATAATTGCCTTGCTTT+TGG 0.197948 3_2:+77430274 Msa0426800:three_prime_UTR
CAAAATAATTGCCTTGCTTT+TGG 0.205775 3_2:+77430186 Msa0426800:three_prime_UTR
CATATACAATTCTACTTATT+GGG 0.225786 3_2:+77423751 Msa0426800:five_prime_UTR
CAAATTCTTCTGAATTTAAA+TGG 0.226951 3_2:-77424052 None:intergenic
GAATCTACTCCTTCAGGTTC+TGG 0.242977 3_2:-77429640 None:intergenic
ACCTTCAATGCGCTTATAAA+TGG 0.247175 3_2:+77423087 Msa0426800:five_prime_UTR
GATGGATTAAGATGCATTTA+AGG 0.248376 3_2:+77431851 Msa0426800:three_prime_UTR
AGTAAATACTTAATGTTATT+GGG 0.262062 3_2:+77434793 Msa0426800:three_prime_UTR
CTTGTAATGTTGTTCTTAAT+GGG 0.269993 3_2:+77422575 None:intergenic
GCTTTGCGAGAGGGAATTAA+AGG 0.273294 3_2:+77431959 Msa0426800:three_prime_UTR
TCTTTATTCCCAAGCTTATA+AGG 0.274627 3_2:+77423986 Msa0426800:five_prime_UTR
TCGAGTTAACGATGTTCTTC+AGG 0.277012 3_2:+77431481 Msa0426800:three_prime_UTR
AGGTCTGACCTGTGATTAAC+TGG 0.286915 3_2:+77431634 Msa0426800:three_prime_UTR
CCACGGCCACGACCTGAATT+AGG 0.294064 3_2:+77429613 Msa0426800:three_prime_UTR
ACTTTCGTTGTTAAGGGTTC+TGG 0.295532 3_2:+77434665 Msa0426800:three_prime_UTR
GGTTCTGGTTATCCTAATTC+AGG 0.295903 3_2:-77429625 None:intergenic
GTAGACTTAATGATACAATT+AGG 0.297478 3_2:-77430970 None:intergenic
CAACACATTGATCTGACTTT+AGG 0.298627 3_2:-77429873 None:intergenic
GAGTGGGCTGTTGATCTTAT+TGG 0.313477 3_2:+77424008 Msa0426800:five_prime_UTR
GGAAGCTGAGGCGTTGCTTC+TGG 0.314730 3_2:-77429785 None:intergenic
CTTCAACAAGTTATTGTTGT+TGG 0.324295 3_2:-77430476 None:intergenic
TCTTCTGAATCTACTCCTTC+AGG 0.326381 3_2:-77429646 None:intergenic
GGCCGTGGAGGAGGACGTTT+TGG 0.327430 3_2:-77429598 None:intergenic
CTCTTGTCATGATTCGTTAG+AGG 0.328918 3_2:+77432030 Msa0426800:three_prime_UTR
GGAGATAGAGATTGTCTAAC+AGG 0.334217 3_2:-77430944 None:intergenic
AATATCCCCAGTTACGAAAA+TGG 0.334544 3_2:+77424197 Msa0426800:five_prime_UTR
TGTAGAAACTTTCGTTGTTA+AGG 0.338501 3_2:+77434658 Msa0426800:three_prime_UTR
GTTGCAGCGGTATGGGAATA+AGG 0.338961 3_2:-77424978 None:intergenic
ATTGGTAGGATGGAATCTTT+TGG 0.341810 3_2:+77424026 Msa0426800:five_prime_UTR
TATATTGCATTGCTTTCCTT+TGG 0.342098 3_2:-77432007 None:intergenic
TGCTACAATGCTGTAATTCA+AGG 0.345764 3_2:+77422889 Msa0426800:five_prime_UTR
CAGAAGAGGGAGGCACAGTT+TGG 0.347103 3_2:+77429662 Msa0426800:three_prime_UTR
ATAGTAATTAGACAGTAAAA+TGG 0.347399 3_2:-77430380 None:intergenic
AGAATTCCGGTCTTCTTCCT+TGG 0.350126 3_2:-77425029 None:intergenic
CCAATAAGTAGAATTGTATA+TGG 0.352188 3_2:-77423750 None:intergenic
CTTAGACAAGTTATTGTTGT+TGG 0.354678 3_2:-77425540 None:intergenic
CTTAGACAAGTTATTGTTGT+TGG 0.354678 3_2:-77429129 None:intergenic
GATTCGAGGTTTACTTGAAC+TGG 0.358191 3_2:+77423698 Msa0426800:five_prime_UTR
ATGTACAGATACAGAATTAT+TGG 0.360032 3_2:-77431300 None:intergenic
GTAGAAACTTTCGTTGTTAA+GGG 0.362154 3_2:+77434659 Msa0426800:three_prime_UTR
ATTGGAAGGAACCTGAGATT+TGG 0.363404 3_2:+77429439 Msa0426800:three_prime_UTR
AAACTGATCCTTACTCTAAC+TGG 0.370061 3_2:+77425154 Msa0426800:CDS
GTTTCGCATCAGTCTTTCTC+AGG 0.370751 3_2:+77423182 Msa0426800:five_prime_UTR
TGGTGCTAGTCTCCAGAAAA+AGG 0.371648 3_2:+77423224 Msa0426800:five_prime_UTR
TACACAGAGTTGGGATTTGA+TGG 0.373993 3_2:+77431454 Msa0426800:intron
GAATTCCGGTCTTCTTCCTT+GGG 0.376316 3_2:-77425028 None:intergenic
CTTGTACTGCTCAATTCAAT+TGG 0.379986 3_2:-77429322 None:intergenic
GATGAAAGAGTTTCTTTATG+TGG 0.381477 3_2:+77424164 Msa0426800:five_prime_UTR
CCGATCATCGCTGATAATAT+AGG 0.388591 3_2:-77431829 None:intergenic
ATCAGTCTTTCTCAGGGTTC+TGG 0.388972 3_2:+77423189 Msa0426800:five_prime_UTR
ATGGGAATAAGGCAACAAAT+TGG 0.389392 3_2:-77424967 None:intergenic
GAATTCTGCTGCGGATGTTA+TGG 0.390247 3_2:+77434484 Msa0426800:three_prime_UTR
TCTTTCTCAGGGTTCTGGTC+AGG 0.394353 3_2:+77423194 Msa0426800:five_prime_UTR
TCCATTTATAAGCGCATTGA+AGG 0.402726 3_2:-77423088 None:intergenic
CTTTCAATAGCATAAATTAC+CGG 0.403891 3_2:+77429831 Msa0426800:three_prime_UTR
CATCCATTTGTTATATTCTC+CGG 0.404923 3_2:-77425107 None:intergenic
AGGCAAAAGAATTATTTAAT+CGG 0.405224 3_2:+77423031 Msa0426800:five_prime_UTR
TATTGAAAGTAAATTTCATA+TGG 0.405884 3_2:-77429817 None:intergenic
AAAGAATTTATTTCACAAGA+TGG 0.406959 3_2:+77423140 Msa0426800:five_prime_UTR
AATTGGCAGTTGAAGACTAT+AGG 0.408482 3_2:+77434398 Msa0426800:intron
CTACATCAAAATACAAGAAA+AGG 0.412694 3_2:-77434640 None:intergenic
TTTGAAGAGCCTTCCTAGTC+GGG 0.414147 3_2:+77423617 Msa0426800:five_prime_UTR
TTTACTTGAACTGGACTTCA+AGG 0.417481 3_2:+77423707 Msa0426800:five_prime_UTR
ACCTGTGATTAACTGGGATA+AGG 0.417963 3_2:+77431641 Msa0426800:three_prime_UTR
TTGATTCTTTATCGTATGCT+TGG 0.418026 3_2:-77430089 None:intergenic
ATTGTTTCTGCGCGTGTGTT+GGG 0.421017 3_2:+77424848 Msa0426800:five_prime_UTR
TTCAGGGCTTTCCACGTTTG+CGG 0.421400 3_2:+77431498 Msa0426800:three_prime_UTR
CGAGAGGGAATTAAAGGCTA+TGG 0.422618 3_2:+77431965 Msa0426800:three_prime_UTR
GTGGTATACCAAGATGTTTA+AGG 0.424247 3_2:+77422738 Msa0426800:five_prime_UTR
AATATGATCTCAAAGTTCAT+AGG 0.426724 3_2:+77430055 Msa0426800:three_prime_UTR
ATTGGCAGTTGAAGACTATA+GGG 0.431703 3_2:+77434399 Msa0426800:intron
GAGGGCAGGGTTGGTGAAGC+TGG 0.435161 3_2:+77422817 Msa0426800:five_prime_UTR
AGGAGGTGATTACAAATCAT+TGG 0.435432 3_2:-77423954 None:intergenic
TAACAAATGGATGTTAATCA+TGG 0.436181 3_2:+77425117 Msa0426800:exon
GATCAAAAGATGTCCACAAT+TGG 0.438078 3_2:-77430229 None:intergenic
TAGACTTAATGATACAATTA+GGG 0.440809 3_2:-77430969 None:intergenic
GTGGAAAGGTTGCAGCGGTA+TGG 0.442610 3_2:-77424986 None:intergenic
TGAAGCTGGTAAGATGTTAG+AGG 0.444705 3_2:+77422831 Msa0426800:five_prime_UTR
AATTGTTTCTGCGCGTGTGT+TGG 0.446903 3_2:+77424847 Msa0426800:five_prime_UTR
TGGAGCTAACTTAAAATCTC+TGG 0.447231 3_2:-77423730 None:intergenic
GAACATCTCTAGAGAGAAAA+GGG 0.447650 3_2:-77434572 None:intergenic
CTGATCATGCTGGCGAGCTT+AGG 0.452443 3_2:+77423298 Msa0426800:five_prime_UTR
GAGTGTACATAAGACAATAA+AGG 0.452490 3_2:+77431263 Msa0426800:three_prime_UTR
CGAGTTAACGATGTTCTTCA+GGG 0.454655 3_2:+77431482 Msa0426800:three_prime_UTR
AAGAATTTATTTCACAAGAT+GGG 0.460371 3_2:+77423141 Msa0426800:five_prime_UTR
TTGTCAGAGGAGGGCAGGGT+TGG 0.460445 3_2:+77422808 Msa0426800:five_prime_UTR
CAGCCCACTCCTTATAAGCT+TGG 0.460498 3_2:-77423995 None:intergenic
ATTCAAGGTTTATGTGATGT+AGG 0.461091 3_2:+77422904 Msa0426800:five_prime_UTR
AATAAATAAACGAGCTCGAG+AGG 0.462437 3_2:-77434689 None:intergenic
TGGATCTGAAGATGATTTCA+TGG 0.464034 3_2:-77425084 None:intergenic
GAAACTGTTGATTGAACCTA+TGG 0.464701 3_2:+77429521 Msa0426800:three_prime_UTR
TCAGGTCGTGGCCGTGGAGG+AGG 0.466264 3_2:-77429607 None:intergenic
CCACGTTTGCGGTTAACTCA+TGG 0.466966 3_2:+77431509 Msa0426800:three_prime_UTR
GCGGGACTGGCTTGAGCTGA+TGG 0.468179 3_2:+77429416 Msa0426800:three_prime_UTR
CCTAATTCAGGTCGTGGCCG+TGG 0.468199 3_2:-77429613 None:intergenic
AGCCCACTCCTTATAAGCTT+GGG 0.468733 3_2:-77423994 None:intergenic
CAGATTAGGAACTTTGCAAA+AGG 0.469770 3_2:+77428904 Msa0426800:intron
ATTAAAACAAGAGGCGGGAC+TGG 0.470620 3_2:+77429403 Msa0426800:three_prime_UTR
CTCACGTCTGCACCTTCTAC+TGG 0.470668 3_2:-77429700 None:intergenic
TCACCCGATAGTGTTACATA+TGG 0.470678 3_2:+77423423 Msa0426800:five_prime_UTR
TCTATGAGTTTCCAAATCTC+AGG 0.471542 3_2:-77429450 None:intergenic
GGTTCTGGTCAGGTTTCTGA+TGG 0.472493 3_2:+77423204 Msa0426800:five_prime_UTR
CTCTATTACACTGGTAGCCA+TGG 0.473628 3_2:+77430905 Msa0426800:three_prime_UTR
TGAAACTTCTTCACCAATTG+TGG 0.477881 3_2:+77430216 Msa0426800:three_prime_UTR
GTGGTTTGTCAGAGGAGGGC+AGG 0.478472 3_2:+77422803 Msa0426800:five_prime_UTR
AGAAGAGGGAGGCACAGTTT+GGG 0.480443 3_2:+77429663 Msa0426800:three_prime_UTR
TGGAAAGGTTGCAGCGGTAT+GGG 0.480669 3_2:-77424985 None:intergenic
ATTTGATCAAAAGATGTAAG+TGG 0.481193 3_2:-77430145 None:intergenic
TCTACTTATTGGGTTCTGTC+AGG 0.481406 3_2:+77423761 Msa0426800:five_prime_UTR
TCTGCGCGTGTGTTGGGCGT+TGG 0.484041 3_2:+77424854 Msa0426800:five_prime_UTR
TGAACATCTCTAGAGAGAAA+AGG 0.484833 3_2:-77434573 None:intergenic
CAAATTAGGAACTTCGCAAA+AGG 0.485141 3_2:+77430251 Msa0426800:three_prime_UTR
CCACCGGAGAATATAACAAA+TGG 0.487048 3_2:+77425104 Msa0426800:exon
TTTGATCAGAGGTCTTTGTA+AGG 0.487255 3_2:+77423866 Msa0426800:five_prime_UTR
GATGTGTGCTGCTGTTAAAA+AGG 0.488348 3_2:+77429092 Msa0426800:intron
AATTCATGTCCATAGGATCC+AGG 0.488795 3_2:-77424888 None:intergenic
ACTGGCTTGAGCTGATGGAT+TGG 0.491525 3_2:+77429421 Msa0426800:three_prime_UTR
GTGTGGTTAATAAAGAAAGA+TGG 0.491829 3_2:+77422637 Msa0426800:five_prime_UTR
CAGTCACGATTATACACAAT+TGG 0.492029 3_2:-77430317 None:intergenic
CAGTCAGGATTATCCACAAT+TGG 0.492348 3_2:-77428970 None:intergenic
GTCCCATATGTAACACTATC+GGG 0.496756 3_2:-77423426 None:intergenic
CCTGTGATTAACTGGGATAA+GGG 0.497909 3_2:+77431642 Msa0426800:three_prime_UTR
GATACCAGCCAGTTAGAGTA+AGG 0.498408 3_2:-77425162 None:intergenic
GCATTGTAGCAATAAGCATC+AGG 0.500049 3_2:-77422877 None:intergenic
TACATCAAAATACAAGAAAA+GGG 0.500396 3_2:-77434639 None:intergenic
TGAATATCTGCCACGCATCA+AGG 0.500991 3_2:-77429943 None:intergenic
GACTATAGGGAAGAATTGTA+TGG 0.502297 3_2:+77434412 Msa0426800:three_prime_UTR
AATCCCCTCCTTAAACATCT+TGG 0.502367 3_2:-77422746 None:intergenic
CTTATTGGGTTCTGTCAGGC+AGG 0.502549 3_2:+77423765 Msa0426800:five_prime_UTR
GATGTGTGCTGCTGTTAAAA+AGG 0.503422 3_2:+77425503 Msa0426800:intron
TTTAATCGGATGGAGAAGCT+TGG 0.506864 3_2:+77423045 Msa0426800:five_prime_UTR
ATAGCGTACAAAACAACATC+AGG 0.507613 3_2:-77422772 None:intergenic
TTTCAGCGTATGCAGAAGAC+TGG 0.507756 3_2:+77423501 Msa0426800:five_prime_UTR
ACAGACATGTCACCAGTAGA+AGG 0.508224 3_2:+77429688 Msa0426800:three_prime_UTR
TTAGAGGAGATGACTCAGAT+AGG 0.509426 3_2:+77422847 Msa0426800:five_prime_UTR
ACACTGATTCTGATCTAGTA+AGG 0.514210 3_2:+77430410 Msa0426800:three_prime_UTR
TTCCCAAGCTTATAAGGAGT+GGG 0.514236 3_2:+77423992 Msa0426800:five_prime_UTR
CCCTTATCCCAGTTAATCAC+AGG 0.514463 3_2:-77431642 None:intergenic
CTAACGGAACTCTATTACAC+TGG 0.517755 3_2:+77430896 Msa0426800:three_prime_UTR
GTATCCACCTCATTAATCAT+TGG 0.519216 3_2:-77431138 None:intergenic
TCCGACATGAAAGCACAGTC+AGG 0.519344 3_2:-77428985 None:intergenic
TATTTCACAAGATGGGCGTC+GGG 0.520581 3_2:+77423148 Msa0426800:five_prime_UTR
TTGCAACATATTGTTACCAT+AGG 0.520761 3_2:-77429537 None:intergenic
CCACCTCATTAATCATTGGC+AGG 0.524619 3_2:-77431134 None:intergenic
AACGTTACGATCCAAGCAAA+AGG 0.525354 3_2:-77423355 None:intergenic
GGTTATCCTAATTCAGGTCG+TGG 0.526618 3_2:-77429619 None:intergenic
TTCCTGCCATTGAGAGTAGT+AGG 0.526904 3_2:-77434531 None:intergenic
AAAAGAATTATTTAATCGGA+TGG 0.528103 3_2:+77423035 Msa0426800:five_prime_UTR
TTTAGTGTCTTCAGAACCAA+AGG 0.529083 3_2:+77431991 Msa0426800:three_prime_UTR
AGGGAAGAATTGTATGGAGC+TGG 0.529675 3_2:+77434418 Msa0426800:three_prime_UTR
CATGGTCAAGTTGGCAGAGA+CGG 0.531686 3_2:-77429475 None:intergenic
CAAATTAGGAACTTCGCAAA+GGG 0.533636 3_2:+77430163 Msa0426800:three_prime_UTR
ACACAGAGTTGGGATTTGAT+GGG 0.536182 3_2:+77431455 Msa0426800:intron
TGGTTTGTCAGAGGAGGGCA+GGG 0.540486 3_2:+77422804 Msa0426800:five_prime_UTR
GTGAAGGAAATGTGTGAGGC+GGG 0.543604 3_2:+77423246 Msa0426800:five_prime_UTR
ATTCCCAAGCTTATAAGGAG+TGG 0.543611 3_2:+77423991 Msa0426800:five_prime_UTR
TAGCCATGGAATGGACATCA+TGG 0.544453 3_2:+77430919 Msa0426800:three_prime_UTR
TTTCGCATCAGTCTTTCTCA+GGG 0.545930 3_2:+77423183 Msa0426800:five_prime_UTR
GAAGCTTGGATGTGAACCTT+CGG 0.546553 3_2:+77423059 Msa0426800:five_prime_UTR
TGTTGATCTTATTGGTAGGA+TGG 0.548501 3_2:+77424016 Msa0426800:five_prime_UTR
CATGAGTGTCATGGTCAAGT+TGG 0.549992 3_2:-77429484 None:intergenic
AAATTGGAACAAGTGATTCG+AGG 0.553367 3_2:+77423684 Msa0426800:five_prime_UTR
ATTGGCAGGAATTCAGCAGC+AGG 0.554542 3_2:-77431120 None:intergenic
TGTCCCATATGTAACACTAT+CGG 0.555468 3_2:-77423427 None:intergenic
TGACACTCATGAGGTATAGC+AGG 0.557750 3_2:+77429496 Msa0426800:three_prime_UTR
TTCAGAAGCTCAACGGTCGA+TGG 0.560370 3_2:+77424718 Msa0426800:intron
GAGAGGGAATTAAAGGCTAT+GGG 0.560447 3_2:+77431966 Msa0426800:three_prime_UTR
TTATTTCACAAGATGGGCGT+CGG 0.560926 3_2:+77423147 Msa0426800:five_prime_UTR
CACCTACTACTCTCAATGGC+AGG 0.562709 3_2:+77434529 Msa0426800:three_prime_UTR
TAGAAAGAACAAGGTCTCAC+GGG 0.563854 3_2:+77423572 Msa0426800:five_prime_UTR
GAAATCATCTTCAGATCCAC+CGG 0.564366 3_2:+77425088 Msa0426800:five_prime_UTR
CATATGGGACAATTATCAAA+GGG 0.564621 3_2:+77423439 Msa0426800:five_prime_UTR
ATTTGAAGAGCCTTCCTAGT+CGG 0.565150 3_2:+77423616 Msa0426800:five_prime_UTR
CACAGAGTTGGGATTTGATG+GGG 0.565686 3_2:+77431456 Msa0426800:intron
GCGGTTAACTCATGGTTGCA+AGG 0.565697 3_2:+77431517 Msa0426800:three_prime_UTR
ATTGCAAGTAGAACTGTGGT+TGG 0.566442 3_2:-77434818 None:intergenic
ACATATGGGACAATTATCAA+AGG 0.566814 3_2:+77423438 Msa0426800:five_prime_UTR
AACATCCCAAGGAAGAAGAC+CGG 0.566931 3_2:+77425023 Msa0426800:five_prime_UTR
CATTAAGTCTACAGACAAGC+AGG 0.567188 3_2:+77430981 Msa0426800:three_prime_UTR
CACCCGATAGTGTTACATAT+GGG 0.567559 3_2:+77423424 Msa0426800:five_prime_UTR
TTGCCTCAATGTAGATGAGA+AGG 0.568379 3_2:+77431322 Msa0426800:three_prime_UTR
GCAGGAATTCAGCAGCAGGT+TGG 0.569824 3_2:-77431116 None:intergenic
GGCCCATGATGTCCATTCCA+TGG 0.570158 3_2:-77430922 None:intergenic
TCTAGTTCTAGTCCTAGCAC+TGG 0.574472 3_2:-77429380 None:intergenic
GAAGGAGTAGATTCAGAAGA+GGG 0.577256 3_2:+77429649 Msa0426800:three_prime_UTR
TTACACTGGTAGCCATGGAA+TGG 0.580251 3_2:+77430910 Msa0426800:three_prime_UTR
TGCCAAAACGTCCTCCTCCA+CGG 0.582622 3_2:+77429596 Msa0426800:three_prime_UTR
ACGTAACAGGCTTTGCGAGA+GGG 0.583395 3_2:+77431950 Msa0426800:intron
ATACCAAGATGTTTAAGGAG+GGG 0.586099 3_2:+77422743 Msa0426800:five_prime_UTR
TATTATCAGCGATGATCGGA+TGG 0.587816 3_2:+77431833 Msa0426800:three_prime_UTR
TTGCAAGACGGGGAGGCTAG+AGG 0.587832 3_2:+77422600 Msa0426800:five_prime_UTR
TGATTTGAATTCATGTCCAT+AGG 0.588247 3_2:-77424895 None:intergenic
GTAATTAGACAGTAAAATGG+AGG 0.588512 3_2:-77430377 None:intergenic
CCATGAGTTAACCGCAAACG+TGG 0.590717 3_2:-77431509 None:intergenic
TGAAGGAGTAGATTCAGAAG+AGG 0.592292 3_2:+77429648 Msa0426800:three_prime_UTR
GGGCTGTTGATCTTATTGGT+AGG 0.593411 3_2:+77424012 Msa0426800:five_prime_UTR
CCTATATTATCAGCGATGAT+CGG 0.593935 3_2:+77431829 Msa0426800:three_prime_UTR
TGTCCACCTACTACTCTCAA+TGG 0.594778 3_2:+77434525 Msa0426800:three_prime_UTR
TGCTCATACATACACAGGGA+AGG 0.594855 3_2:+77434461 Msa0426800:three_prime_UTR
ACATCAAAATTCTACAACAA+GGG 0.595087 3_2:-77434601 None:intergenic
CTGCTGCGGATGTTATGGCT+AGG 0.595642 3_2:+77434489 Msa0426800:three_prime_UTR
GCTTGAGCTGATGGATTGGA+AGG 0.596979 3_2:+77429425 Msa0426800:three_prime_UTR
CAATAGCATACCATGTGGAA+AGG 0.597956 3_2:-77425000 None:intergenic
ACTAGAATTAAAACAAGAGG+CGG 0.599953 3_2:+77429397 Msa0426800:three_prime_UTR
AAGTTAATCACTGATCATGC+TGG 0.600386 3_2:+77423288 Msa0426800:five_prime_UTR
CTGCTCTGATAACAAACTCA+AGG 0.600637 3_2:+77424937 Msa0426800:five_prime_UTR
AGATCAATGTGTTGTTGTGA+AGG 0.601563 3_2:+77429882 Msa0426800:three_prime_UTR
TGATCCTTACTCTAACTGGC+TGG 0.602267 3_2:+77425158 Msa0426800:CDS
ACAGGAAAACATTGAAGAGG+TGG 0.602297 3_2:+77424762 Msa0426800:five_prime_UTR
TTCATCATACTCCAAAAGCA+AGG 0.602890 3_2:-77430197 None:intergenic
CTTAATGATACAATTAGGGT+GGG 0.603401 3_2:-77430965 None:intergenic
CCATTTGTTATATTCTCCGG+TGG 0.604864 3_2:-77425104 None:intergenic
TCAAATTAGGAACTTCGCAA+AGG 0.605080 3_2:+77430162 Msa0426800:three_prime_UTR
TCCTGACTGTGCTTTCATGT+CGG 0.605113 3_2:+77428984 Msa0426800:CDS
CTAGAATTAAAACAAGAGGC+GGG 0.607647 3_2:+77429398 Msa0426800:three_prime_UTR
GTGTCTGCTCATACATACAC+AGG 0.608747 3_2:+77434456 Msa0426800:three_prime_UTR
ATTGAGTCGTTGTCCCGACT+AGG 0.608817 3_2:-77423630 None:intergenic
GATGTGTGCTGCTGTTAAAG+AGG 0.610000 3_2:+77430439 Msa0426800:three_prime_UTR
CAGAGCAGTATACGTGAGAA+CGG 0.611688 3_2:-77424922 None:intergenic
AGAACTAGAATTAAAACAAG+AGG 0.612154 3_2:+77429394 Msa0426800:three_prime_UTR
GCTACTCCAAGAGTAGTGAC+AGG 0.614933 3_2:+77424744 Msa0426800:five_prime_UTR
AGTTGTGTACATTTGATCAG+AGG 0.615429 3_2:+77423855 Msa0426800:five_prime_UTR
TGGTTCAGCTGTGGAAGCTG+AGG 0.616469 3_2:-77429797 None:intergenic
GAGGACTGTATACCAGTGCT+AGG 0.616513 3_2:+77429368 Msa0426800:three_prime_UTR
GCATTGAAGGTCACAACCGA+AGG 0.616695 3_2:-77423075 None:intergenic
GTAGAAAGAACAAGGTCTCA+CGG 0.616795 3_2:+77423571 Msa0426800:five_prime_UTR
ACTTAATGATACAATTAGGG+TGG 0.617586 3_2:-77430966 None:intergenic
AGCCATGGAATGGACATCAT+GGG 0.617755 3_2:+77430920 Msa0426800:three_prime_UTR
AATTTCATATGGTTCAGCTG+TGG 0.618834 3_2:-77429806 None:intergenic
TCCATCATAGTCCAAAAGCA+AGG 0.620284 3_2:-77430285 None:intergenic
TTTGAGGAACTGCAAAAGTG+GGG 0.621075 3_2:+77423396 Msa0426800:five_prime_UTR
ATAAATAAACGAGCTCGAGA+GGG 0.622060 3_2:-77434688 None:intergenic
TACATCAAAATTCTACAACA+AGG 0.622180 3_2:-77434602 None:intergenic
AGTCGTTGTCCCGACTAGGA+AGG 0.623377 3_2:-77423626 None:intergenic
TATACCAAGATGTTTAAGGA+GGG 0.624255 3_2:+77422742 Msa0426800:five_prime_UTR
GCTCATACATACACAGGGAA+GGG 0.626101 3_2:+77434462 Msa0426800:three_prime_UTR
TGAAATGTGTAAGCGAGGAA+TGG 0.627635 3_2:+77423002 Msa0426800:five_prime_UTR
AATGATACGTGGTTTGTCAG+AGG 0.628555 3_2:+77422795 Msa0426800:five_prime_UTR
GGTCGTGAATCAAGAACCAA+AGG 0.628779 3_2:+77424218 Msa0426800:five_prime_UTR
AATAAAGAAGACGCGTGAGG+AGG 0.631508 3_2:-77423971 None:intergenic
AACGTAACAGGCTTTGCGAG+AGG 0.632868 3_2:+77431949 Msa0426800:intron
TAACTGGGATAAGGGAGAAG+CGG 0.634020 3_2:+77431650 Msa0426800:three_prime_UTR
GCTATACCTCATGAGTGTCA+TGG 0.637914 3_2:-77429493 None:intergenic
ATACGTGGTTTGTCAGAGGA+GGG 0.638587 3_2:+77422799 Msa0426800:five_prime_UTR
CCAGAAACTCACATGTGCGA+AGG 0.638643 3_2:-77430021 None:intergenic
GGTGAAGGAAATGTGTGAGG+CGG 0.638687 3_2:+77423245 Msa0426800:five_prime_UTR
GTATACCAAGATGTTTAAGG+AGG 0.639438 3_2:+77422741 Msa0426800:five_prime_UTR
GATACGTGGTTTGTCAGAGG+AGG 0.640700 3_2:+77422798 Msa0426800:five_prime_UTR
ATGTTTAGATACATCAGTAG+AGG 0.641322 3_2:+77429349 Msa0426800:three_prime_UTR
TCAACTAGCACCTTGATGCG+TGG 0.641627 3_2:+77429933 Msa0426800:three_prime_UTR
TCAAAATTCTACAACAAGGG+AGG 0.644610 3_2:-77434598 None:intergenic
AATTCAGGTCGTGGCCGTGG+AGG 0.645709 3_2:-77429610 None:intergenic
GAGGTCTTTGTAAGGAACAG+AGG 0.646560 3_2:+77423874 Msa0426800:five_prime_UTR
ATACCTTCTCATCTACATTG+AGG 0.647535 3_2:-77431325 None:intergenic
GTGACAGGAAAACATTGAAG+AGG 0.649854 3_2:+77424759 Msa0426800:five_prime_UTR
TTGTTTGTGTAGAAAGAACA+AGG 0.650196 3_2:+77423563 Msa0426800:five_prime_UTR
GTATGCTATTGAACATCCCA+AGG 0.650582 3_2:+77425012 Msa0426800:five_prime_UTR
ATATGTGAAATGTGTAAGCG+AGG 0.651606 3_2:+77422997 Msa0426800:five_prime_UTR
TTAGGATAACCAGAACCTGA+AGG 0.655429 3_2:+77429631 Msa0426800:three_prime_UTR
GTGCGTGCAAACATTGTGCT+CGG 0.655549 3_2:-77422965 None:intergenic
ATTCCTGCCAATGATTAATG+AGG 0.655854 3_2:+77431131 Msa0426800:three_prime_UTR
GTGTGCTGCTGTTAAAGAGG+TGG 0.657379 3_2:+77430442 Msa0426800:three_prime_UTR
GGGAATAAAGAAGACGCGTG+AGG 0.658875 3_2:-77423974 None:intergenic
TTGTACGCTATAATGATACG+TGG 0.658988 3_2:+77422784 Msa0426800:five_prime_UTR
ACCGCTGCAACCTTTCCACA+TGG 0.659398 3_2:+77424990 Msa0426800:five_prime_UTR
TCGTGACTGTGCATTCATGT+TGG 0.664748 3_2:+77430331 Msa0426800:three_prime_UTR
TGAGATTTGGAAACTCATAG+AGG 0.669573 3_2:+77429452 Msa0426800:three_prime_UTR
GATATAGGGAAGCACATGTG+TGG 0.671853 3_2:+77422719 Msa0426800:five_prime_UTR
GGAGTAGATTCAGAAGAGGG+AGG 0.674883 3_2:+77429652 Msa0426800:three_prime_UTR
CTGCCATTGAGAGTAGTAGG+TGG 0.677887 3_2:-77434528 None:intergenic
TACTAGATCAGAATCAGTGT+AGG 0.679987 3_2:-77430407 None:intergenic
AAAGATTGCAAGTAGAACTG+TGG 0.682071 3_2:-77434822 None:intergenic
CAGGGAAGGGAATTCTGCTG+CGG 0.683195 3_2:+77434475 Msa0426800:three_prime_UTR
AAAGGTGAAGGAAATGTGTG+AGG 0.684045 3_2:+77423242 Msa0426800:five_prime_UTR
ACATCTCTAGAGAGAAAAGG+GGG 0.686928 3_2:-77434570 None:intergenic
ACCATGTGGAAAGGTTGCAG+CGG 0.688571 3_2:-77424991 None:intergenic
CTATACTTAAAAGTAACATG+AGG 0.696482 3_2:+77434766 Msa0426800:three_prime_UTR
AACATCTCTAGAGAGAAAAG+GGG 0.697964 3_2:-77434571 None:intergenic
GGTCTGACCTGTGATTAACT+GGG 0.698814 3_2:+77431635 Msa0426800:three_prime_UTR
ACTTGACCATGACACTCATG+AGG 0.698829 3_2:+77429487 Msa0426800:three_prime_UTR
TTGTCTAAGAAGTCATGACA+AGG 0.699767 3_2:+77425554 Msa0426800:CDS
GAGATAGAGATTGTCTAACA+GGG 0.702566 3_2:-77430943 None:intergenic
ATGTTCAATAGCATACCATG+TGG 0.709497 3_2:-77425005 None:intergenic
TGTCTGCTCATACATACACA+GGG 0.717492 3_2:+77434457 Msa0426800:three_prime_UTR
AGAAGTAAGAAATCATGACA+AGG 0.720840 3_2:+77429150 Msa0426800:exon
TTGTTGAAGAAATCGTGACA+AGG 0.725253 3_2:+77430490 Msa0426800:three_prime_UTR
TAAGCGAGGAATGGTTGCTG+AGG 0.728955 3_2:+77423011 Msa0426800:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTATTATAATTAAA+TGG + chr3_2:77427727-77427746 Msa0426800:intron 0.0%
!!! AGTTTTATAAATAATAATTG+AGG + chr3_2:77427352-77427371 Msa0426800:intron 10.0%
!!! ATTTTTATACCAATTATTAT+TGG + chr3_2:77427632-77427651 Msa0426800:intron 10.0%
!!! TTTTTATACCAATTATTATT+GGG + chr3_2:77427633-77427652 Msa0426800:intron 10.0%
!! AAAAAAAAATATGCAATAAT+AGG - chr3_2:77427704-77427723 None:intergenic 10.0%
!! AAAATCATTTATCTTTAAAT+TGG - chr3_2:77430570-77430589 None:intergenic 10.0%
!!! TATATATATAATTTTGATGT+AGG - chr3_2:77432624-77432643 None:intergenic 10.0%
!! AAAATCAAATTTAATTGTAA+AGG - chr3_2:77433661-77433680 None:intergenic 10.0%
!!! TCTTATTAATGGATTTTTTA+AGG + chr3_2:77422690-77422709 Msa0426800:five_prime_UTR 15.0%
!!! ACTCTAGAAAAATATTTATT+CGG + chr3_2:77423657-77423676 Msa0426800:five_prime_UTR 15.0%
!!! GTTTAAAGTAAAATTCTAAA+AGG - chr3_2:77424377-77424396 None:intergenic 15.0%
!! TATTGAAAGTAAATTTCATA+TGG - chr3_2:77426229-77426248 None:intergenic 15.0%
!!! TTTTTATTATTAATGTTACG+CGG + chr3_2:77426532-77426551 Msa0426800:intron 15.0%
!!! AAGAGTATTTTATGTTTTTT+TGG + chr3_2:77427246-77427265 Msa0426800:intron 15.0%
!!! AGAGTATTTTATGTTTTTTT+GGG + chr3_2:77427247-77427266 Msa0426800:intron 15.0%
!!! ATGACTTTTTAAAATAATGT+TGG - chr3_2:77427960-77427979 None:intergenic 15.0%
!! AAGAGAAAAATTATCAAATT+TGG - chr3_2:77429284-77429303 None:intergenic 15.0%
!! TATTGAAAGTAAATTTCATA+TGG - chr3_2:77426229-77426248 None:intergenic 15.0%
!! ATACATCTGTAATAATAAAA+GGG - chr3_2:77433027-77433046 None:intergenic 15.0%
!! AATACATCTGTAATAATAAA+AGG - chr3_2:77433028-77433047 None:intergenic 15.0%
!!! TTATTACAGATGTATTATTT+TGG + chr3_2:77433032-77433051 Msa0426800:intron 15.0%
!! GTCAAAAAAAAAAAAAAGAA+AGG + chr3_2:77433221-77433240 Msa0426800:intron 15.0%
!!! AATGTTAGTTTTTAATAACT+TGG + chr3_2:77433602-77433621 Msa0426800:intron 15.0%
!!! TTTGATTTTATCTTTTTGTT+TGG + chr3_2:77433672-77433691 Msa0426800:intron 15.0%
!!! TTTTCTTATCTAAATTTATG+TGG + chr3_2:77433822-77433841 Msa0426800:intron 15.0%
!! CTCATTATTATTTACAAATT+AGG + chr3_2:77434292-77434311 Msa0426800:intron 15.0%
!! AAGTAAATACTTAATGTTAT+TGG + chr3_2:77434792-77434811 Msa0426800:three_prime_UTR 15.0%
!! AGTAAATACTTAATGTTATT+GGG + chr3_2:77434793-77434812 Msa0426800:three_prime_UTR 15.0%
!! AAAAAATCCATTAATAAGAG+AGG - chr3_2:77422689-77422708 None:intergenic 20.0%
!! AGGCAAAAGAATTATTTAAT+CGG + chr3_2:77423031-77423050 Msa0426800:five_prime_UTR 20.0%
!! AAAAGAATTATTTAATCGGA+TGG + chr3_2:77423035-77423054 Msa0426800:five_prime_UTR 20.0%
!! AAAGAATTTATTTCACAAGA+TGG + chr3_2:77423140-77423159 Msa0426800:five_prime_UTR 20.0%
!! AAGAATTTATTTCACAAGAT+GGG + chr3_2:77423141-77423160 Msa0426800:five_prime_UTR 20.0%
!! ATATTTATTCGGAGAAAAAT+TGG + chr3_2:77423668-77423687 Msa0426800:five_prime_UTR 20.0%
!! CATATACAATTCTACTTATT+GGG + chr3_2:77423751-77423770 Msa0426800:five_prime_UTR 20.0%
!!! ATTTTTTTACAGTCTTGATA+AGG + chr3_2:77423917-77423936 Msa0426800:five_prime_UTR 20.0%
!!! TTTTTTTACAGTCTTGATAA+GGG + chr3_2:77423918-77423937 Msa0426800:five_prime_UTR 20.0%
!! CAAATTCTTCTGAATTTAAA+TGG - chr3_2:77424055-77424074 None:intergenic 20.0%
!!! TTTTTCTTTTCTTTCCTTTT+TGG - chr3_2:77424106-77424125 None:intergenic 20.0%
!!! TGTAATTTAATCTTTTCTGA+GGG - chr3_2:77424132-77424151 None:intergenic 20.0%
!! AAGAAAAAACATATACAGAA+GGG - chr3_2:77424254-77424273 None:intergenic 20.0%
!! TGAAATTTAACATACACATA+AGG - chr3_2:77424285-77424304 None:intergenic 20.0%
!! TGCAAAATGAACAAAAATAA+AGG - chr3_2:77425261-77425280 None:intergenic 20.0%
!!! TTACATCTTTTGATCAAATT+AGG + chr3_2:77425301-77425320 Msa0426800:intron 20.0%
!! ATCATTTATCCTTAAATCAT+CGG - chr3_2:77425634-77425653 None:intergenic 20.0%
!! AAGAGAAAAATTGTCAAATT+TGG - chr3_2:77425693-77425712 None:intergenic 20.0%
!! AGAACTAGAATTAAAACAAA+AGG + chr3_2:77425803-77425822 Msa0426800:intron 20.0%
!!! TTTTATTATTAATGTTACGC+GGG + chr3_2:77426533-77426552 Msa0426800:intron 20.0%
!! TTAATGTTTACATTACAAGA+TGG - chr3_2:77426643-77426662 None:intergenic 20.0%
!! TTCAAAATTAGTAAACTACA+AGG - chr3_2:77426764-77426783 None:intergenic 20.0%
!!! TTGTAGTTTACTAATTTTGA+AGG + chr3_2:77426763-77426782 Msa0426800:intron 20.0%
!! CTGAAAATTCGATAAAATAA+AGG - chr3_2:77427877-77427896 None:intergenic 20.0%
!!! AAAATAATGTTGGTTCTAAA+TGG - chr3_2:77427950-77427969 None:intergenic 20.0%
!!! TTTTTATTGACAAAAGAGTA+TGG + chr3_2:77428384-77428403 Msa0426800:intron 20.0%
!!! ACATCCATTGTTATATTTTT+CGG - chr3_2:77428700-77428719 None:intergenic 20.0%
!! TGCAAAATGAACAAAAATAA+AGG - chr3_2:77425261-77425280 None:intergenic 20.0%
!!! TTACATCTTTTGATCAAATT+AGG + chr3_2:77425301-77425320 Msa0426800:intron 20.0%
!! ATAGTAATTAGACAGTAAAA+TGG - chr3_2:77430383-77430402 None:intergenic 20.0%
!!! TGTGATTAAACACTATTTTA+AGG - chr3_2:77430721-77430740 None:intergenic 20.0%
!! TAGACTTAATGATACAATTA+GGG - chr3_2:77430972-77430991 None:intergenic 20.0%
!!! TTTTATTTTTTACACAGAGT+TGG + chr3_2:77431444-77431463 Msa0426800:intron 20.0%
!!! TTTATTTTTTACACAGAGTT+GGG + chr3_2:77431445-77431464 Msa0426800:intron 20.0%
!!! CATCAGAAAATATTGTTTTT+AGG + chr3_2:77431781-77431800 Msa0426800:intron 20.0%
!! TATGAACTCAGTTAAAAATT+GGG - chr3_2:77432061-77432080 None:intergenic 20.0%
!!! TGAGTTCATACATTATATTT+TGG + chr3_2:77432071-77432090 Msa0426800:intron 20.0%
!!! GAGTTCATACATTATATTTT+GGG + chr3_2:77432072-77432091 Msa0426800:intron 20.0%
!! ATGTATGATTATGATATTTC+TGG + chr3_2:77432438-77432457 Msa0426800:intron 20.0%
!! GATGAATGTTATATATGTTA+AGG - chr3_2:77433096-77433115 None:intergenic 20.0%
!! ATATACATAGAAATAAGAGA+AGG + chr3_2:77433554-77433573 Msa0426800:intron 20.0%
!! TTCAAATATATATGAGTTTG+AGG + chr3_2:77433853-77433872 Msa0426800:intron 20.0%
!! AACAATCCATTCATATAAAT+TGG + chr3_2:77434381-77434400 Msa0426800:intron 20.0%
!! TACATCAAAATACAAGAAAA+GGG - chr3_2:77434642-77434661 None:intergenic 20.0%
!!! TTAATGGATTTTTTAAGGCT+AGG + chr3_2:77422695-77422714 Msa0426800:five_prime_UTR 25.0%
!! AAGTGTTTTATAAACTGAGA+GGG - chr3_2:77423538-77423557 None:intergenic 25.0%
!! TAAGTGTTTTATAAACTGAG+AGG - chr3_2:77423539-77423558 None:intergenic 25.0%
! CCAATAAGTAGAATTGTATA+TGG - chr3_2:77423753-77423772 None:intergenic 25.0%
! CCATATACAATTCTACTTAT+TGG + chr3_2:77423750-77423769 Msa0426800:five_prime_UTR 25.0%
!!! TTTTCTTTCCTTTTTGGTAT+TGG - chr3_2:77424100-77424119 None:intergenic 25.0%
!! GTGTAATTTAATCTTTTCTG+AGG - chr3_2:77424133-77424152 None:intergenic 25.0%
! CAAGAAAAAACATATACAGA+AGG - chr3_2:77424255-77424274 None:intergenic 25.0%
! AGTTATTGTAGAACAGTATA+AGG + chr3_2:77424321-77424340 Msa0426800:intron 25.0%
!!! GAATTTTGAAGAGTGATTAT+CGG + chr3_2:77424471-77424490 Msa0426800:intron 25.0%
! AAGAAAGAAAGAAACTTTGT+GGG - chr3_2:77424509-77424528 None:intergenic 25.0%
! TAAGAAAGAAAGAAACTTTG+TGG - chr3_2:77424510-77424529 None:intergenic 25.0%
! TTCTAATGTTTGGAAATGTA+TGG + chr3_2:77424560-77424579 Msa0426800:intron 25.0%
! AAAAACATCTTCAAGAATTC+CGG - chr3_2:77425045-77425064 None:intergenic 25.0%
! TAACAAATGGATGTTAATCA+TGG + chr3_2:77425117-77425136 Msa0426800:exon 25.0%
!! TTCTCTTATCGATTAATCTT+AGG + chr3_2:77425706-77425725 Msa0426800:intron 25.0%
! ACTAGAATTAAAACAAAAGG+CGG + chr3_2:77425806-77425825 Msa0426800:intron 25.0%
!! ACTTTCTCAAGAATTTTCTA+CGG - chr3_2:77426262-77426281 None:intergenic 25.0%
! AATATGATCTCAAAGTTCAT+AGG + chr3_2:77426464-77426483 Msa0426800:intron 25.0%
! AATTAAGAATTCACCAGTTT+AGG - chr3_2:77426563-77426582 None:intergenic 25.0%
! AATCTTTCTTTACTTTGTCA+GGG + chr3_2:77426846-77426865 Msa0426800:intron 25.0%
!! ATAACAATGGAAACAACTTT+TGG - chr3_2:77427385-77427404 None:intergenic 25.0%
! TAAAGAGAATTATCCTACTT+GGG - chr3_2:77427592-77427611 None:intergenic 25.0%
! ATAAAGAGAATTATCCTACT+TGG - chr3_2:77427593-77427612 None:intergenic 25.0%
! GTAGGATAATTCTCTTTATT+TGG + chr3_2:77427594-77427613 Msa0426800:intron 25.0%
! TTCTTCTTCCCAATAATAAT+TGG - chr3_2:77427644-77427663 None:intergenic 25.0%
!!! TTTTAAAAAGTCATGTTTGC+TGG + chr3_2:77427966-77427985 Msa0426800:intron 25.0%
!! TTATTCTGTCACTTGATATT+CGG + chr3_2:77428072-77428091 Msa0426800:intron 25.0%
! TTCAATCTAATGTTGTCAAA+TGG + chr3_2:77428099-77428118 Msa0426800:intron 25.0%
!!! TATAAAGTGTTGTCAAATAG+AGG + chr3_2:77428180-77428199 Msa0426800:intron 25.0%
!!! ATAAAGTGTTGTCAAATAGA+GGG + chr3_2:77428181-77428200 Msa0426800:intron 25.0%
! AAAAACATCTTCAAGAATTC+CGG - chr3_2:77425045-77425064 None:intergenic 25.0%
!!! TTGAAGATGTTTTTTTCTTG+TGG + chr3_2:77428640-77428659 Msa0426800:intron 25.0%
! ATAACAATGGATGTTAATCA+CGG + chr3_2:77428706-77428725 Msa0426800:intron 25.0%
!! TTACATCTTTTGATCAGATT+AGG + chr3_2:77428890-77428909 Msa0426800:intron 25.0%
!! TTCTCTTATCGATTAATCTT+AGG + chr3_2:77425706-77425725 Msa0426800:intron 25.0%
! AGAACTAGAATTAAAACAAG+AGG + chr3_2:77429394-77429413 Msa0426800:three_prime_UTR 25.0%
! CTTTCAATAGCATAAATTAC+CGG + chr3_2:77426240-77426259 Msa0426800:intron 25.0%
! AATATGATCTCAAAGTTCAT+AGG + chr3_2:77426464-77426483 Msa0426800:intron 25.0%
! ATTTGATCAAAAGATGTAAG+TGG - chr3_2:77425300-77425319 None:intergenic 25.0%
! ATTGGTAAGACAAAAGAAAA+AGG - chr3_2:77430552-77430571 None:intergenic 25.0%
!! GTTCAAGTACATGAATTTTT+AGG + chr3_2:77430872-77430891 Msa0426800:intron 25.0%
!!! ACATGAATTTTTAGGACTAA+CGG + chr3_2:77430880-77430899 Msa0426800:three_prime_UTR 25.0%
! GTAGACTTAATGATACAATT+AGG - chr3_2:77430973-77430992 None:intergenic 25.0%
! ATGTACAGATACAGAATTAT+TGG - chr3_2:77431303-77431322 None:intergenic 25.0%
! TAACTTAATGTCGATGAAAA+GGG - chr3_2:77431406-77431425 None:intergenic 25.0%
! AACTAACTCAGTACATTTAA+AGG + chr3_2:77431586-77431605 Msa0426800:intron 25.0%
! TTAAAATACAAGCAAACAAG+TGG - chr3_2:77431911-77431930 None:intergenic 25.0%
! GTATGAACTCAGTTAAAAAT+TGG - chr3_2:77432062-77432081 None:intergenic 25.0%
! TAATTTGATACATACATTCC+CGG + chr3_2:77432173-77432192 Msa0426800:intron 25.0%
! AAATCCTTAATCTTCTGTTT+GGG - chr3_2:77432381-77432400 None:intergenic 25.0%
! TAAATCCTTAATCTTCTGTT+TGG - chr3_2:77432382-77432401 None:intergenic 25.0%
! GAAATAAAATGTACAATCAG+CGG + chr3_2:77432460-77432479 Msa0426800:intron 25.0%
!!! TATAATTTTGATGTAGGTGA+AGG - chr3_2:77432618-77432637 None:intergenic 25.0%
!!! GTTTTAATGGAACTTATAAG+TGG - chr3_2:77432921-77432940 None:intergenic 25.0%
! AAAACTGATATTTACAGCTA+CGG - chr3_2:77432948-77432967 None:intergenic 25.0%
! ATGTTATATATGTTAAGGTG+TGG - chr3_2:77433091-77433110 None:intergenic 25.0%
! CTCATCTATTTGAATTAACT+TGG + chr3_2:77433331-77433350 Msa0426800:intron 25.0%
!! ACATTATAATGGGGATAATA+TGG - chr3_2:77433506-77433525 None:intergenic 25.0%
! ATATTATCCCCATTATAATG+TGG + chr3_2:77433505-77433524 Msa0426800:intron 25.0%
! TATTATCCCCATTATAATGT+GGG + chr3_2:77433506-77433525 Msa0426800:intron 25.0%
!! TGGTTTACAAACTCTTATTT+AGG + chr3_2:77433622-77433641 Msa0426800:intron 25.0%
!!! GAATTTGTTGTCTTTTTGTT+TGG + chr3_2:77434231-77434250 Msa0426800:intron 25.0%
!! CATTTTATCAATCTGTTGAA+AGG - chr3_2:77434266-77434285 None:intergenic 25.0%
! ACATCAAAATTCTACAACAA+GGG - chr3_2:77434604-77434623 None:intergenic 25.0%
! TACATCAAAATTCTACAACA+AGG - chr3_2:77434605-77434624 None:intergenic 25.0%
! CTACATCAAAATACAAGAAA+AGG - chr3_2:77434643-77434662 None:intergenic 25.0%
! CTATACTTAAAAGTAACATG+AGG + chr3_2:77434766-77434785 Msa0426800:three_prime_UTR 25.0%
GTGTGGTTAATAAAGAAAGA+TGG + chr3_2:77422637-77422656 Msa0426800:five_prime_UTR 30.0%
AGCTATTCCTCTCTTATTAA+TGG + chr3_2:77422679-77422698 Msa0426800:five_prime_UTR 30.0%
!!! TTTTTAAGGCTAGGAGATAT+AGG + chr3_2:77422704-77422723 Msa0426800:five_prime_UTR 30.0%
!!! TTTTAAGGCTAGGAGATATA+GGG + chr3_2:77422705-77422724 Msa0426800:five_prime_UTR 30.0%
TATACCAAGATGTTTAAGGA+GGG + chr3_2:77422742-77422761 Msa0426800:five_prime_UTR 30.0%
ATTCAAGGTTTATGTGATGT+AGG + chr3_2:77422904-77422923 Msa0426800:five_prime_UTR 30.0%
CTCAAAAAGATTATAAGCAG+CGG - chr3_2:77423382-77423401 None:intergenic 30.0%
ACATATGGGACAATTATCAA+AGG + chr3_2:77423438-77423457 Msa0426800:five_prime_UTR 30.0%
CATATGGGACAATTATCAAA+GGG + chr3_2:77423439-77423458 Msa0426800:five_prime_UTR 30.0%
TTGTTTGTGTAGAAAGAACA+AGG + chr3_2:77423563-77423582 Msa0426800:five_prime_UTR 30.0%
TCTTTATTCCCAAGCTTATA+AGG + chr3_2:77423986-77424005 Msa0426800:five_prime_UTR 30.0%
! CTTTTACACCAATACCAAAA+AGG + chr3_2:77424089-77424108 Msa0426800:five_prime_UTR 30.0%
GATGAAAGAGTTTCTTTATG+TGG + chr3_2:77424164-77424183 Msa0426800:five_prime_UTR 30.0%
ACATATACAGAAGGGATAAA+GGG - chr3_2:77424246-77424265 None:intergenic 30.0%
AACATATACAGAAGGGATAA+AGG - chr3_2:77424247-77424266 None:intergenic 30.0%
GTTATAGACATGTGATTTCT+TGG - chr3_2:77424399-77424418 None:intergenic 30.0%
TCACATGTCTATAACTACTA+TGG + chr3_2:77424404-77424423 Msa0426800:intron 30.0%
ATTATGGAGAAATTACCGTT+TGG + chr3_2:77424598-77424617 Msa0426800:intron 30.0%
TTATGGAGAAATTACCGTTT+GGG + chr3_2:77424599-77424618 Msa0426800:intron 30.0%
! CAATATTTTCAGAAGCTCAA+CGG + chr3_2:77424711-77424730 Msa0426800:intron 30.0%
! TTTTTATCGACAAAAGAGCA+TGG + chr3_2:77424786-77424805 Msa0426800:five_prime_UTR 30.0%
TGATTTGAATTCATGTCCAT+AGG - chr3_2:77424898-77424917 None:intergenic 30.0%
!!! CTTGAAGATGTTTTTTCTTG+TGG + chr3_2:77425050-77425069 Msa0426800:five_prime_UTR 30.0%
!!! AAGATGTTTTTTCTTGTGGT+TGG + chr3_2:77425054-77425073 Msa0426800:five_prime_UTR 30.0%
!! CATCCATTTGTTATATTCTC+CGG - chr3_2:77425110-77425129 None:intergenic 30.0%
CAGGATACTAATTGAAATAG+AGG - chr3_2:77425194-77425213 None:intergenic 30.0%
TCAAAAGATGTAAGTGCTTA+TGG - chr3_2:77425294-77425313 None:intergenic 30.0%
! CAAAATAATTGCACTGCTTT+TGG + chr3_2:77425338-77425357 Msa0426800:intron 30.0%
TTCCTACAATTATTCTGATC+TGG + chr3_2:77425469-77425488 Msa0426800:intron 30.0%
TACCAGATCAGAATAATTGT+AGG - chr3_2:77425474-77425493 None:intergenic 30.0%
ACAATTATTCTGATCTGGTA+AGG + chr3_2:77425474-77425493 Msa0426800:intron 30.0%
CTTAGACAAGTTATTGTTGT+TGG - chr3_2:77425543-77425562 None:intergenic 30.0%
ATCGGTAAGAGAAAAGAAAA+GGG - chr3_2:77425616-77425635 None:intergenic 30.0%
TTTCTCTTACCGATGATTTA+AGG + chr3_2:77425622-77425641 Msa0426800:intron 30.0%
CACAAAAGTTTGTCTGAATT+TGG - chr3_2:77425670-77425689 None:intergenic 30.0%
!!! ATGTTTTGATACATCAGTAG+AGG + chr3_2:77425758-77425777 Msa0426800:intron 30.0%
CTAGAATTAAAACAAAAGGC+GGG + chr3_2:77425807-77425826 Msa0426800:intron 30.0%
ATTGAACCTATGGTAACAAT+AGG + chr3_2:77425940-77425959 Msa0426800:intron 30.0%
AACTGGTGAATTCTTAATTC+TGG + chr3_2:77426564-77426583 Msa0426800:intron 30.0%
!! TAATTCTGGTTTGTCTTCAT+AGG + chr3_2:77426578-77426597 Msa0426800:intron 30.0%
GAAAGATTCTTCAACGAAAT+AGG - chr3_2:77426834-77426853 None:intergenic 30.0%
GAATCTTTCTTTACTTTGTC+AGG + chr3_2:77426845-77426864 Msa0426800:intron 30.0%
ATCTTTCTTTACTTTGTCAG+GGG + chr3_2:77426847-77426866 Msa0426800:intron 30.0%
!! AGTGAGTTTGTTAATGAGTA+AGG + chr3_2:77427023-77427042 Msa0426800:intron 30.0%
AAAGAGAATTATCCTACTTG+GGG - chr3_2:77427591-77427610 None:intergenic 30.0%
!! CTTTGTTGTGCTTTTGATAA+CGG + chr3_2:77427766-77427785 Msa0426800:intron 30.0%
!! ATGTTGGTTCTAAATGGAAA+TGG - chr3_2:77427944-77427963 None:intergenic 30.0%
!! TTAGTTGATAGCAGCTATAT+CGG + chr3_2:77428018-77428037 Msa0426800:intron 30.0%
!! CAATATTTTGAGAAGCTCAA+CGG + chr3_2:77428309-77428328 Msa0426800:intron 30.0%
TGATTTGAATTCATGTCCAT+AGG - chr3_2:77424898-77424917 None:intergenic 30.0%
!!! AGATGTTTTTTTCTTGTGGT+TGG + chr3_2:77428644-77428663 Msa0426800:intron 30.0%
TCCACCGAAAAATATAACAA+TGG + chr3_2:77428693-77428712 Msa0426800:intron 30.0%
!! TCCATTGTTATATTTTTCGG+TGG - chr3_2:77428697-77428716 None:intergenic 30.0%
ACGGGATACTAAATGAAATA+GGG - chr3_2:77428784-77428803 None:intergenic 30.0%
TACGGGATACTAAATGAAAT+AGG - chr3_2:77428785-77428804 None:intergenic 30.0%
TCAAAAGATGTAAGTGCTTA+TGG - chr3_2:77425294-77425313 None:intergenic 30.0%
! CAAAATAATTGCACTGCTTT+TGG + chr3_2:77425338-77425357 Msa0426800:intron 30.0%
! TGGAAAATTTTCACCAATTG+TGG + chr3_2:77428957-77428976 Msa0426800:CDS 30.0%
TTCCTACAATTATTCTGATC+TGG + chr3_2:77425469-77425488 Msa0426800:intron 30.0%
TACCAGATCAGAATAATTGT+AGG - chr3_2:77425474-77425493 None:intergenic 30.0%
ACAATTATTCTGATCTGGTA+AGG + chr3_2:77425474-77425493 Msa0426800:intron 30.0%
CTTAGACAAGTTATTGTTGT+TGG - chr3_2:77425543-77425562 None:intergenic 30.0%
AGAAGTAAGAAATCATGACA+AGG + chr3_2:77429150-77429169 Msa0426800:exon 30.0%
ATCGATAAGAGAAAAGGAAA+AGG - chr3_2:77429212-77429231 None:intergenic 30.0%
CCTTAAATCGATAAGAGAAA+AGG - chr3_2:77429218-77429237 None:intergenic 30.0%
!!! CCTTTTCTCTTATCGATTTA+AGG + chr3_2:77429215-77429234 Msa0426800:intron 30.0%
ATGTTTAGATACATCAGTAG+AGG + chr3_2:77429349-77429368 Msa0426800:three_prime_UTR 30.0%
ACTAGAATTAAAACAAGAGG+CGG + chr3_2:77429397-77429416 Msa0426800:three_prime_UTR 30.0%
TTGCAACATATTGTTACCAT+AGG - chr3_2:77429540-77429559 None:intergenic 30.0%
! ACTTTCTCAAGAATTTTCTC+CGG - chr3_2:77429853-77429872 None:intergenic 30.0%
TTGATTCTTTATCGTATGCT+TGG - chr3_2:77430092-77430111 None:intergenic 30.0%
! CAAAATAATTGCCTTGCTTT+TGG + chr3_2:77430186-77430205 Msa0426800:three_prime_UTR 30.0%
! GGACATCTTTTGATCAAATT+AGG + chr3_2:77430237-77430256 Msa0426800:three_prime_UTR 30.0%
! CAAAATAATTGCCTTGCTTT+TGG + chr3_2:77430186-77430205 Msa0426800:three_prime_UTR 30.0%
GTAATTAGACAGTAAAATGG+AGG - chr3_2:77430380-77430399 None:intergenic 30.0%
CTTCAACAAGTTATTGTTGT+TGG - chr3_2:77430479-77430498 None:intergenic 30.0%
CACGAAAGTTTGTCTAAATT+TGG - chr3_2:77430602-77430621 None:intergenic 30.0%
CGTAAACCACTTGAAAAAAT+TGG - chr3_2:77430625-77430644 None:intergenic 30.0%
! TGTGGTTAACTCTAATTTTC+AGG + chr3_2:77430669-77430688 Msa0426800:intron 30.0%
!! ATTATAACTAGCTTTCCTAC+TGG + chr3_2:77430850-77430869 Msa0426800:intron 30.0%
CTTAATGATACAATTAGGGT+GGG - chr3_2:77430968-77430987 None:intergenic 30.0%
ACTTAATGATACAATTAGGG+TGG - chr3_2:77430969-77430988 None:intergenic 30.0%
TCTCTTATGATCCAATTACA+GGG + chr3_2:77431075-77431094 Msa0426800:intron 30.0%
GAGTGTACATAAGACAATAA+AGG + chr3_2:77431263-77431282 Msa0426800:three_prime_UTR 30.0%
GTAACTTAATGTCGATGAAA+AGG - chr3_2:77431407-77431426 None:intergenic 30.0%
!! GTTGCAAGGTACTATTTTAA+GGG + chr3_2:77431531-77431550 Msa0426800:intron 30.0%
ACTTTATTACTCGCTTCATT+AGG + chr3_2:77431557-77431576 Msa0426800:intron 30.0%
GAAACCATATACTACAGAAA+CGG - chr3_2:77431717-77431736 None:intergenic 30.0%
!! GATGGATTAAGATGCATTTA+AGG + chr3_2:77431851-77431870 Msa0426800:three_prime_UTR 30.0%
TATATTGCATTGCTTTCCTT+TGG - chr3_2:77432010-77432029 None:intergenic 30.0%
! TAATAATTTTGCCTTCTGCA+AGG - chr3_2:77432241-77432260 None:intergenic 30.0%
! ATTAATACATTTTCCCTGTG+CGG + chr3_2:77432320-77432339 Msa0426800:intron 30.0%
!! GCTTTTTCTAACGTTAAACT+AGG + chr3_2:77432346-77432365 Msa0426800:intron 30.0%
AATCCTTAATCTTCTGTTTG+GGG - chr3_2:77432380-77432399 None:intergenic 30.0%
ACGCATAAAATGCTGAATAA+AGG + chr3_2:77432402-77432421 Msa0426800:intron 30.0%
TGCTGAATAAAGGAAAGTAA+TGG + chr3_2:77432412-77432431 Msa0426800:intron 30.0%
ACATCATTCAATTCCCTATT+AGG + chr3_2:77432657-77432676 Msa0426800:intron 30.0%
TCAAAAGGATCAACCTAATA+GGG - chr3_2:77432673-77432692 None:intergenic 30.0%
TTCAAAAGGATCAACCTAAT+AGG - chr3_2:77432674-77432693 None:intergenic 30.0%
AGATGGAATTAACGGTATAT+TGG - chr3_2:77432823-77432842 None:intergenic 30.0%
! TTGAATGAAGAATTTGGTGA+AGG - chr3_2:77432888-77432907 None:intergenic 30.0%
! TATCAGTTTTCTCATCAACT+TGG + chr3_2:77432958-77432977 Msa0426800:intron 30.0%
AATATGGTAAATGCGTTACT+AGG - chr3_2:77433490-77433509 None:intergenic 30.0%
ATTATCCCCATTATAATGTG+GGG + chr3_2:77433507-77433526 Msa0426800:intron 30.0%
! AGAGAAGGAGCATATAATAA+AGG + chr3_2:77433569-77433588 Msa0426800:intron 30.0%
AGTCATTGAGATGATTTAGA+GGG + chr3_2:77433888-77433907 Msa0426800:intron 30.0%
GTGAAGAGAAAGAAAAGAAA+AGG + chr3_2:77434005-77434024 Msa0426800:intron 30.0%
! TTTCATTGTTGTTGAGATGA+TGG + chr3_2:77434028-77434047 Msa0426800:intron 30.0%
ATGGAAGAGAACAAGAAATA+AGG + chr3_2:77434047-77434066 Msa0426800:intron 30.0%
AGAACAAGAAATAAGGAAGT+TGG + chr3_2:77434054-77434073 Msa0426800:intron 30.0%
GAACAAGAAATAAGGAAGTT+GGG + chr3_2:77434055-77434074 Msa0426800:intron 30.0%
AGATGCAATATATATCTGAC+AGG + chr3_2:77434099-77434118 Msa0426800:intron 30.0%
GATGCAATATATATCTGACA+GGG + chr3_2:77434100-77434119 Msa0426800:intron 30.0%
AGAGAAGGAGCAAATAATAA+AGG + chr3_2:77434124-77434143 Msa0426800:intron 30.0%
! AATGAATGTTAGTCTCTGTT+TGG + chr3_2:77434337-77434356 Msa0426800:intron 30.0%
CAACTGCCAATTTATATGAA+TGG - chr3_2:77434390-77434409 None:intergenic 30.0%
TGTAGAAACTTTCGTTGTTA+AGG + chr3_2:77434658-77434677 Msa0426800:three_prime_UTR 30.0%
GTAGAAACTTTCGTTGTTAA+GGG + chr3_2:77434659-77434678 Msa0426800:three_prime_UTR 30.0%
!!! TCTTAATGGGTTTTGCAAGA+CGG + chr3_2:77422588-77422607 Msa0426800:five_prime_UTR 35.0%
GTGGTATACCAAGATGTTTA+AGG + chr3_2:77422738-77422757 Msa0426800:five_prime_UTR 35.0%
GTATACCAAGATGTTTAAGG+AGG + chr3_2:77422741-77422760 Msa0426800:five_prime_UTR 35.0%
ATACCAAGATGTTTAAGGAG+GGG + chr3_2:77422743-77422762 Msa0426800:five_prime_UTR 35.0%
ATAGCGTACAAAACAACATC+AGG - chr3_2:77422775-77422794 None:intergenic 35.0%
TTGTACGCTATAATGATACG+TGG + chr3_2:77422784-77422803 Msa0426800:five_prime_UTR 35.0%
TGCTACAATGCTGTAATTCA+AGG + chr3_2:77422889-77422908 Msa0426800:five_prime_UTR 35.0%
ATATGTGAAATGTGTAAGCG+AGG + chr3_2:77422997-77423016 Msa0426800:five_prime_UTR 35.0%
ACCTTCAATGCGCTTATAAA+TGG + chr3_2:77423087-77423106 Msa0426800:five_prime_UTR 35.0%
TCCATTTATAAGCGCATTGA+AGG - chr3_2:77423091-77423110 None:intergenic 35.0%
GTGCAAAGCTAAAAATCTTG+AGG + chr3_2:77423113-77423132 Msa0426800:five_prime_UTR 35.0%
! ACATTTCCTTCACCTTTTTC+TGG - chr3_2:77423239-77423258 None:intergenic 35.0%
AAGTTAATCACTGATCATGC+TGG + chr3_2:77423288-77423307 Msa0426800:five_prime_UTR 35.0%
! TCTAATCAATGCCTTTTGCT+TGG + chr3_2:77423344-77423363 Msa0426800:five_prime_UTR 35.0%
! CGCTGCTTATAATCTTTTTG+AGG + chr3_2:77423380-77423399 Msa0426800:five_prime_UTR 35.0%
!! TTTTTGAGGAACTGCAAAAG+TGG + chr3_2:77423394-77423413 Msa0426800:five_prime_UTR 35.0%
!! TTTTGAGGAACTGCAAAAGT+GGG + chr3_2:77423395-77423414 Msa0426800:five_prime_UTR 35.0%
TGTCCCATATGTAACACTAT+CGG - chr3_2:77423430-77423449 None:intergenic 35.0%
CATACGCTGAAAAACCTTAA+AGG - chr3_2:77423493-77423512 None:intergenic 35.0%
! GTTTTATAAACTGAGAGGGT+AGG - chr3_2:77423534-77423553 None:intergenic 35.0%
AAATTGGAACAAGTGATTCG+AGG + chr3_2:77423684-77423703 Msa0426800:five_prime_UTR 35.0%
TTTACTTGAACTGGACTTCA+AGG + chr3_2:77423707-77423726 Msa0426800:five_prime_UTR 35.0%
TGGAGCTAACTTAAAATCTC+TGG - chr3_2:77423733-77423752 None:intergenic 35.0%
AGTTGTGTACATTTGATCAG+AGG + chr3_2:77423855-77423874 Msa0426800:five_prime_UTR 35.0%
TTTGATCAGAGGTCTTTGTA+AGG + chr3_2:77423866-77423885 Msa0426800:five_prime_UTR 35.0%
AGGAGGTGATTACAAATCAT+TGG - chr3_2:77423957-77423976 None:intergenic 35.0%
TGTTGATCTTATTGGTAGGA+TGG + chr3_2:77424016-77424035 Msa0426800:five_prime_UTR 35.0%
! ATTGGTAGGATGGAATCTTT+TGG + chr3_2:77424026-77424045 Msa0426800:five_prime_UTR 35.0%
AATATCCCCAGTTACGAAAA+TGG + chr3_2:77424197-77424216 Msa0426800:five_prime_UTR 35.0%
CAGTATAAGGATCGATTAAG+AGG + chr3_2:77424334-77424353 Msa0426800:intron 35.0%
! ATTCTAAAAGGAAGCATGCA+AGG - chr3_2:77424365-77424384 None:intergenic 35.0%
TTCTTTCTTAAGCGTGCATT+CGG + chr3_2:77424520-77424539 Msa0426800:intron 35.0%
TTTGCATGCGTTCTAATGTT+TGG + chr3_2:77424550-77424569 Msa0426800:intron 35.0%
! AAATGTATGGACACGTCTTT+TGG + chr3_2:77424573-77424592 Msa0426800:intron 35.0%
! AGTGCATCTTTTCTTTCCAT+TGG - chr3_2:77424634-77424653 None:intergenic 35.0%
ATGGGAATAAGGCAACAAAT+TGG - chr3_2:77424970-77424989 None:intergenic 35.0%
ATGTTCAATAGCATACCATG+TGG - chr3_2:77425008-77425027 None:intergenic 35.0%
!!! TGTTTTTTCTTGTGGTTGGT+TGG + chr3_2:77425058-77425077 Msa0426800:five_prime_UTR 35.0%
TGGATCTGAAGATGATTTCA+TGG - chr3_2:77425087-77425106 None:intergenic 35.0%
AAACTGATCCTTACTCTAAC+TGG + chr3_2:77425154-77425173 Msa0426800:CDS 35.0%
CATCTTAAAACTGCAGAACT+AGG - chr3_2:77425220-77425239 None:intergenic 35.0%
!!! CTAGTTCTGCAGTTTTAAGA+TGG + chr3_2:77425218-77425237 Msa0426800:intron 35.0%
CAAATTAGGAACTTCGCAAA+AGG + chr3_2:77425315-77425334 Msa0426800:intron 35.0%
!!! TGGAACTTTTTCACCAATTG+TGG + chr3_2:77425368-77425387 Msa0426800:intron 35.0%
CAGTCAAGATTATCCACAAT+TGG - chr3_2:77425384-77425403 None:intergenic 35.0%
TTGTCTAAGAAGTCATGACA+AGG + chr3_2:77425554-77425573 Msa0426800:CDS 35.0%
CATCGGTAAGAGAAAAGAAA+AGG - chr3_2:77425617-77425636 None:intergenic 35.0%
ATTGGAAGGAACTTGAGATT+TGG + chr3_2:77425848-77425867 Msa0426800:intron 35.0%
TGAGATTTGGAAACTCATAG+AGG + chr3_2:77425861-77425880 Msa0426800:intron 35.0%
! GAAACTGTTGATTGAACCTA+TGG + chr3_2:77425930-77425949 Msa0426800:intron 35.0%
TTGCATCCTATTGTTACCAT+AGG - chr3_2:77425949-77425968 None:intergenic 35.0%
!!! GTCAGGTCAGTTTTAAGTTT+GGG - chr3_2:77425976-77425995 None:intergenic 35.0%
!!! TGTCAGGTCAGTTTTAAGTT+TGG - chr3_2:77425977-77425996 None:intergenic 35.0%
! TTTTGGCAATATTCAGTGTC+AGG - chr3_2:77425993-77426012 None:intergenic 35.0%
AATTTCATATGGTTCAGCTG+TGG - chr3_2:77426218-77426237 None:intergenic 35.0%
TTGATTCTTAATCGTGTGCT+TGG - chr3_2:77426501-77426520 None:intergenic 35.0%
AGGTATCATCTATCTGAATC+TGG - chr3_2:77426744-77426763 None:intergenic 35.0%
GTATCGTTTGCACATAACAA+TGG - chr3_2:77427398-77427417 None:intergenic 35.0%
CAACTACACATTATTGAAGC+TGG - chr3_2:77427513-77427532 None:intergenic 35.0%
ATGGGATTAAGGCAACAAAT+TGG - chr3_2:77428559-77428578 None:intergenic 35.0%
ATGTTCAATAGCATACCATG+TGG - chr3_2:77425008-77425027 None:intergenic 35.0%
!!! GTTTTTTTCTTGTGGTTGGT+TGG + chr3_2:77428648-77428667 Msa0426800:intron 35.0%
AAACTGATCCTTACTCTAAC+TGG + chr3_2:77425154-77425173 Msa0426800:CDS 35.0%
CGGGATACTAAATGAAATAG+GGG - chr3_2:77428783-77428802 None:intergenic 35.0%
CATCATAAAACTGCAGAACT+CGG - chr3_2:77428809-77428828 None:intergenic 35.0%
CAGATTAGGAACTTTGCAAA+AGG + chr3_2:77428904-77428923 Msa0426800:intron 35.0%
!! GGCACAAAAGTGTCTAAATT+TGG - chr3_2:77429263-77429282 None:intergenic 35.0%
CTTGTACTGCTCAATTCAAT+TGG - chr3_2:77429325-77429344 None:intergenic 35.0%
CTAGAATTAAAACAAGAGGC+GGG + chr3_2:77429398-77429417 Msa0426800:three_prime_UTR 35.0%
TCTATGAGTTTCCAAATCTC+AGG - chr3_2:77425862-77425881 None:intergenic 35.0%
TGAGATTTGGAAACTCATAG+AGG + chr3_2:77425861-77425880 Msa0426800:intron 35.0%
! GAAACTGTTGATTGAACCTA+TGG + chr3_2:77425930-77425949 Msa0426800:intron 35.0%
! TTTTGGCAATATTCAGTGTC+GGG - chr3_2:77425993-77426012 None:intergenic 35.0%
!! GTTTTGGCAATATTCAGTGT+CGG - chr3_2:77425994-77426013 None:intergenic 35.0%
AATTTCATATGGTTCAGCTG+TGG - chr3_2:77426218-77426237 None:intergenic 35.0%
CAACACATTGATCTGACTTT+AGG - chr3_2:77429876-77429895 None:intergenic 35.0%
! AGATCAATGTGTTGTTGTGA+AGG + chr3_2:77429882-77429901 Msa0426800:three_prime_UTR 35.0%
!! GTTGATACACTTGCTTTTGA+AGG - chr3_2:77429918-77429937 None:intergenic 35.0%
TCAAATTAGGAACTTCGCAA+AGG + chr3_2:77425314-77425333 Msa0426800:intron 35.0%
CAAATTAGGAACTTCGCAAA+GGG + chr3_2:77425315-77425334 Msa0426800:intron 35.0%
TTCATCATACTCCAAAAGCA+AGG - chr3_2:77430200-77430219 None:intergenic 35.0%
TGAAACTTCTTCACCAATTG+TGG + chr3_2:77430216-77430235 Msa0426800:three_prime_UTR 35.0%
GATCAAAAGATGTCCACAAT+TGG - chr3_2:77430232-77430251 None:intergenic 35.0%
CAAATTAGGAACTTCGCAAA+AGG + chr3_2:77425315-77425334 Msa0426800:intron 35.0%
CAGTCACGATTATACACAAT+TGG - chr3_2:77430320-77430339 None:intergenic 35.0%
TACTAGATCAGAATCAGTGT+AGG - chr3_2:77430410-77430429 None:intergenic 35.0%
!! ACACTGATTCTGATCTAGTA+AGG + chr3_2:77430410-77430429 Msa0426800:three_prime_UTR 35.0%
TTGTTGAAGAAATCGTGACA+AGG + chr3_2:77430490-77430509 Msa0426800:three_prime_UTR 35.0%
!!! TTCGTGCCAATTTTTTCAAG+TGG + chr3_2:77430616-77430635 Msa0426800:intron 35.0%
CTGTTCATTTACCACGAAAT+TGG + chr3_2:77430645-77430664 Msa0426800:intron 35.0%
ATTTACCACGAAATTGGATG+TGG + chr3_2:77430651-77430670 Msa0426800:intron 35.0%
ATCAAAAACAACAACGAACG+AGG - chr3_2:77430832-77430851 None:intergenic 35.0%
ATTCATGTACTTGAACCAGT+AGG - chr3_2:77430868-77430887 None:intergenic 35.0%
GAGATAGAGATTGTCTAACA+GGG - chr3_2:77430946-77430965 None:intergenic 35.0%
GTCTACATCTCATCCAATTA+TGG + chr3_2:77431019-77431038 Msa0426800:intron 35.0%
CTCGAACAGATATCCATAAT+TGG - chr3_2:77431035-77431054 None:intergenic 35.0%
CTCTCTTATGATCCAATTAC+AGG + chr3_2:77431074-77431093 Msa0426800:intron 35.0%
CTCTTATGATCCAATTACAG+GGG + chr3_2:77431076-77431095 Msa0426800:intron 35.0%
TAATCTTCTTCCCCTGTAAT+TGG - chr3_2:77431089-77431108 None:intergenic 35.0%
ATTCCTGCCAATGATTAATG+AGG + chr3_2:77431131-77431150 Msa0426800:three_prime_UTR 35.0%
GTATCCACCTCATTAATCAT+TGG - chr3_2:77431141-77431160 None:intergenic 35.0%
ATACCTTCTCATCTACATTG+AGG - chr3_2:77431328-77431347 None:intergenic 35.0%
! CAATGTAGATGAGAAGGTAT+AGG + chr3_2:77431328-77431347 Msa0426800:intron 35.0%
!! GGTTGCAAGGTACTATTTTA+AGG + chr3_2:77431530-77431549 Msa0426800:intron 35.0%
! TTTCTTTTACTCGAGTCACT+TGG + chr3_2:77431679-77431698 Msa0426800:three_prime_UTR 35.0%
! TTTGCCGTTTCTGTAGTATA+TGG + chr3_2:77431710-77431729 Msa0426800:intron 35.0%
CCTATATTATCAGCGATGAT+CGG + chr3_2:77431829-77431848 Msa0426800:three_prime_UTR 35.0%
GATATGAGATGAAACGTAAC+AGG + chr3_2:77431937-77431956 Msa0426800:intron 35.0%
TTTAGTGTCTTCAGAACCAA+AGG + chr3_2:77431991-77432010 Msa0426800:three_prime_UTR 35.0%
!! AATTTTGATGTAGGTGAAGG+TGG - chr3_2:77432615-77432634 None:intergenic 35.0%
TGTTCTCTCAATGCTTCAAA+AGG - chr3_2:77432688-77432707 None:intergenic 35.0%
TATATTGGACAAGAATGCTG+GGG - chr3_2:77432808-77432827 None:intergenic 35.0%
GTATATTGGACAAGAATGCT+GGG - chr3_2:77432809-77432828 None:intergenic 35.0%
CAGACTGAAGATGGAATTAA+CGG - chr3_2:77432831-77432850 None:intergenic 35.0%
AGGTAAGAACATTGTGGATT+GGG - chr3_2:77432868-77432887 None:intergenic 35.0%
AAGGTAAGAACATTGTGGAT+TGG - chr3_2:77432869-77432888 None:intergenic 35.0%
CGTGCATTGAATGAAGAATT+TGG - chr3_2:77432894-77432913 None:intergenic 35.0%
ATGCACATCATGAACAAGAA+AGG + chr3_2:77433186-77433205 Msa0426800:intron 35.0%
! TAAAAATAATCGTGCTGACC+TGG + chr3_2:77433269-77433288 Msa0426800:intron 35.0%
!! AAAGCGAAAGTAGCTGATTT+TGG - chr3_2:77433362-77433381 None:intergenic 35.0%
! CAAACCTCGCAACATTTTAT+TGG - chr3_2:77433396-77433415 None:intergenic 35.0%
ACTAGGTATAAGATAGCCTT+AGG - chr3_2:77433473-77433492 None:intergenic 35.0%
TTCCAACCCCACATTATAAT+GGG - chr3_2:77433516-77433535 None:intergenic 35.0%
CTCTAAATCATCTCAATGAC+TGG - chr3_2:77433889-77433908 None:intergenic 35.0%
CAGTCATTGAGATGATTTAG+AGG + chr3_2:77433887-77433906 Msa0426800:intron 35.0%
ATGATTTAGAGGGTCAATGA+GGG + chr3_2:77433898-77433917 Msa0426800:intron 35.0%
TAGTGGTAGTAACTGTGTTT+GGG + chr3_2:77433968-77433987 Msa0426800:intron 35.0%
AAGAAATAAGGAAGTTGGGT+GGG + chr3_2:77434059-77434078 Msa0426800:intron 35.0%
AATTGGCAGTTGAAGACTAT+AGG + chr3_2:77434398-77434417 Msa0426800:intron 35.0%
ATTGGCAGTTGAAGACTATA+GGG + chr3_2:77434399-77434418 Msa0426800:intron 35.0%
GACTATAGGGAAGAATTGTA+TGG + chr3_2:77434412-77434431 Msa0426800:three_prime_UTR 35.0%
! AACATCTCTAGAGAGAAAAG+GGG - chr3_2:77434574-77434593 None:intergenic 35.0%
! GAACATCTCTAGAGAGAAAA+GGG - chr3_2:77434575-77434594 None:intergenic 35.0%
! TGAACATCTCTAGAGAGAAA+AGG - chr3_2:77434576-77434595 None:intergenic 35.0%
!! TTTTCTCTCTAGAGATGTTC+AGG + chr3_2:77434575-77434594 Msa0426800:three_prime_UTR 35.0%
TCAAAATTCTACAACAAGGG+AGG - chr3_2:77434601-77434620 None:intergenic 35.0%
ATAAATAAACGAGCTCGAGA+GGG - chr3_2:77434691-77434710 None:intergenic 35.0%
AATAAATAAACGAGCTCGAG+AGG - chr3_2:77434692-77434711 None:intergenic 35.0%
! ACATTTTCAGTGTTCTCTTG+AGG - chr3_2:77434739-77434758 None:intergenic 35.0%
!!! CTTAATGGGTTTTGCAAGAC+GGG + chr3_2:77422589-77422608 Msa0426800:five_prime_UTR 40.0%
!!! TTAATGGGTTTTGCAAGACG+GGG + chr3_2:77422590-77422609 Msa0426800:five_prime_UTR 40.0%
!!! AGGAAGCACTTTCTTTTGTG+TGG + chr3_2:77422620-77422639 Msa0426800:five_prime_UTR 40.0%
AATCCCCTCCTTAAACATCT+TGG - chr3_2:77422749-77422768 None:intergenic 40.0%
! AATGATACGTGGTTTGTCAG+AGG + chr3_2:77422795-77422814 Msa0426800:five_prime_UTR 40.0%
TGAAGCTGGTAAGATGTTAG+AGG + chr3_2:77422831-77422850 Msa0426800:five_prime_UTR 40.0%
TTAGAGGAGATGACTCAGAT+AGG + chr3_2:77422847-77422866 Msa0426800:five_prime_UTR 40.0%
GCATTGTAGCAATAAGCATC+AGG - chr3_2:77422880-77422899 None:intergenic 40.0%
TGAAATGTGTAAGCGAGGAA+TGG + chr3_2:77423002-77423021 Msa0426800:five_prime_UTR 40.0%
TTTAATCGGATGGAGAAGCT+TGG + chr3_2:77423045-77423064 Msa0426800:five_prime_UTR 40.0%
TTATTTCACAAGATGGGCGT+CGG + chr3_2:77423147-77423166 Msa0426800:five_prime_UTR 40.0%
TTTCGCATCAGTCTTTCTCA+GGG + chr3_2:77423183-77423202 Msa0426800:five_prime_UTR 40.0%
TAGTCTCCAGAAAAAGGTGA+AGG + chr3_2:77423230-77423249 Msa0426800:five_prime_UTR 40.0%
AAAGGTGAAGGAAATGTGTG+AGG + chr3_2:77423242-77423261 Msa0426800:five_prime_UTR 40.0%
AACGTTACGATCCAAGCAAA+AGG - chr3_2:77423358-77423377 None:intergenic 40.0%
TTTGAGGAACTGCAAAAGTG+GGG + chr3_2:77423396-77423415 Msa0426800:five_prime_UTR 40.0%
TCACCCGATAGTGTTACATA+TGG + chr3_2:77423423-77423442 Msa0426800:five_prime_UTR 40.0%
CACCCGATAGTGTTACATAT+GGG + chr3_2:77423424-77423443 Msa0426800:five_prime_UTR 40.0%
GTCCCATATGTAACACTATC+GGG - chr3_2:77423429-77423448 None:intergenic 40.0%
CAGAGAAGATGATGCCTTTA+AGG + chr3_2:77423476-77423495 Msa0426800:five_prime_UTR 40.0%
GTAGAAAGAACAAGGTCTCA+CGG + chr3_2:77423571-77423590 Msa0426800:five_prime_UTR 40.0%
TAGAAAGAACAAGGTCTCAC+GGG + chr3_2:77423572-77423591 Msa0426800:five_prime_UTR 40.0%
ACGGGCATTCAGTCTTTATT+TGG + chr3_2:77423590-77423609 Msa0426800:five_prime_UTR 40.0%
ATTTGAAGAGCCTTCCTAGT+CGG + chr3_2:77423616-77423635 Msa0426800:five_prime_UTR 40.0%
GATTCGAGGTTTACTTGAAC+TGG + chr3_2:77423698-77423717 Msa0426800:five_prime_UTR 40.0%
TCTACTTATTGGGTTCTGTC+AGG + chr3_2:77423761-77423780 Msa0426800:five_prime_UTR 40.0%
ATTCCCAAGCTTATAAGGAG+TGG + chr3_2:77423991-77424010 Msa0426800:five_prime_UTR 40.0%
TTCCCAAGCTTATAAGGAGT+GGG + chr3_2:77423992-77424011 Msa0426800:five_prime_UTR 40.0%
! TCACGACCATTTTCGTAACT+GGG - chr3_2:77424206-77424225 None:intergenic 40.0%
! TTCACGACCATTTTCGTAAC+TGG - chr3_2:77424207-77424226 None:intergenic 40.0%
!! GACACGTCTTTTGGTGATTA+TGG + chr3_2:77424582-77424601 Msa0426800:intron 40.0%
! TGTTTTCCTGTCACTACTCT+TGG - chr3_2:77424753-77424772 None:intergenic 40.0%
GTGACAGGAAAACATTGAAG+AGG + chr3_2:77424759-77424778 Msa0426800:five_prime_UTR 40.0%
ACAGGAAAACATTGAAGAGG+TGG + chr3_2:77424762-77424781 Msa0426800:five_prime_UTR 40.0%
TGCTAAAAACCTGGATCCTA+TGG + chr3_2:77424879-77424898 Msa0426800:five_prime_UTR 40.0%
AATTCATGTCCATAGGATCC+AGG - chr3_2:77424891-77424910 None:intergenic 40.0%
CTGCTCTGATAACAAACTCA+AGG + chr3_2:77424937-77424956 Msa0426800:five_prime_UTR 40.0%
CAATAGCATACCATGTGGAA+AGG - chr3_2:77425003-77425022 None:intergenic 40.0%
GTATGCTATTGAACATCCCA+AGG + chr3_2:77425012-77425031 Msa0426800:five_prime_UTR 40.0%
GAAATCATCTTCAGATCCAC+CGG + chr3_2:77425088-77425107 Msa0426800:five_prime_UTR 40.0%
!! CCATTTGTTATATTCTCCGG+TGG - chr3_2:77425107-77425126 None:intergenic 40.0%
CCACCGGAGAATATAACAAA+TGG + chr3_2:77425104-77425123 Msa0426800:exon 40.0%
AAACTGCAGAACTAGGATAC+AGG - chr3_2:77425213-77425232 None:intergenic 40.0%
TCTTGACTGTGCTTTCATGT+CGG + chr3_2:77425395-77425414 Msa0426800:intron 40.0%
! GATGTGTGCTGCTGTTAAAA+AGG + chr3_2:77425503-77425522 Msa0426800:intron 40.0%
!! AATCTTAGGTGCCGATTGAA+TGG + chr3_2:77425720-77425739 Msa0426800:intron 40.0%
CTTGTACTGCTCCATTCAAT+CGG - chr3_2:77425734-77425753 None:intergenic 40.0%
ATTAAAACAAAAGGCGGGAC+TGG + chr3_2:77425812-77425831 Msa0426800:intron 40.0%
!! GGTTATCCTAATTCAGGTTG+TGG - chr3_2:77426031-77426050 None:intergenic 40.0%
! GGTTCTGGTTATCCTAATTC+AGG - chr3_2:77426037-77426056 None:intergenic 40.0%
TTAGGATAACCAGAACCTGA+AGG + chr3_2:77426040-77426059 Msa0426800:intron 40.0%
TCTTCTGAATCTACTCCTTC+AGG - chr3_2:77426058-77426077 None:intergenic 40.0%
TGAAGGAGTAGATTCAGAAG+AGG + chr3_2:77426057-77426076 Msa0426800:intron 40.0%
GAAGGAGTAGATTCAGAAGA+GGG + chr3_2:77426058-77426077 Msa0426800:intron 40.0%
CAGCACATTGATCTGACTTT+AGG - chr3_2:77426285-77426304 None:intergenic 40.0%
! AGATCAATGTGCTGTTGTGA+AGG + chr3_2:77426291-77426310 Msa0426800:intron 40.0%
! CTTCACTCAGCTTTTCTTGA+AGG - chr3_2:77426390-77426409 None:intergenic 40.0%
CAAGTGGAAACAGTACAACA+TGG - chr3_2:77426900-77426919 None:intergenic 40.0%
CATGTTGTACTGTTTCCACT+TGG + chr3_2:77426898-77426917 Msa0426800:intron 40.0%
TTGTACTGTTTCCACTTGGT+GGG + chr3_2:77426902-77426921 Msa0426800:intron 40.0%
! ACACCTTCAATCAGAAGTGT+CGG + chr3_2:77427137-77427156 Msa0426800:intron 40.0%
GAAACACGCAAAGTACATGT+TGG - chr3_2:77427549-77427568 None:intergenic 40.0%
AAAACAGCTTGCATGTCTGA+TGG - chr3_2:77427920-77427939 None:intergenic 40.0%
! TGTTTTCCTGTCACTACTCT+TGG - chr3_2:77424753-77424772 None:intergenic 40.0%
GTGACAGGAAAACATTGAAG+AGG + chr3_2:77424759-77424778 Msa0426800:five_prime_UTR 40.0%
ACAGGAAAACATTGAAGAGG+TGG + chr3_2:77424762-77424781 Msa0426800:five_prime_UTR 40.0%
! GACAAAAGAGTATGGTGAAG+TGG + chr3_2:77428392-77428411 Msa0426800:intron 40.0%
!! AATTGTTTCTGCGCATGTGT+TGG + chr3_2:77428445-77428464 Msa0426800:intron 40.0%
AATTCATGTCCATAGGATCC+AGG - chr3_2:77424891-77424910 None:intergenic 40.0%
CTGCTCTGATAACAAACTCA+AGG + chr3_2:77424937-77424956 Msa0426800:five_prime_UTR 40.0%
GTATGCTATTGAACATCCCA+AGG + chr3_2:77425012-77425031 Msa0426800:five_prime_UTR 40.0%
TGGAGCTGAAGATGATTTCA+TGG - chr3_2:77428677-77428696 None:intergenic 40.0%
AAAACTGCAGAACTCGGATA+CGG - chr3_2:77428803-77428822 None:intergenic 40.0%
!! CGAGTTCTGCAGTTTTATGA+TGG + chr3_2:77428807-77428826 Msa0426800:intron 40.0%
CAGTCAGGATTATCCACAAT+TGG - chr3_2:77428973-77428992 None:intergenic 40.0%
! GATGTGTGCTGCTGTTAAAA+AGG + chr3_2:77425503-77425522 Msa0426800:intron 40.0%
ATTGGAAGGAACCTGAGATT+TGG + chr3_2:77429439-77429458 Msa0426800:three_prime_UTR 40.0%
!!! GTCGGGTCTGTTTTAAGTTT+GGG - chr3_2:77429567-77429586 None:intergenic 40.0%
!!! TGTCGGGTCTGTTTTAAGTT+TGG - chr3_2:77429568-77429587 None:intergenic 40.0%
! GGTTCTGGTTATCCTAATTC+AGG - chr3_2:77426037-77426056 None:intergenic 40.0%
TTAGGATAACCAGAACCTGA+AGG + chr3_2:77426040-77426059 Msa0426800:intron 40.0%
TCTTCTGAATCTACTCCTTC+AGG - chr3_2:77426058-77426077 None:intergenic 40.0%
TGAAGGAGTAGATTCAGAAG+AGG + chr3_2:77426057-77426076 Msa0426800:intron 40.0%
GAAGGAGTAGATTCAGAAGA+GGG + chr3_2:77426058-77426077 Msa0426800:intron 40.0%
! CTTCACTCAGCTTTTCTTGA+AGG - chr3_2:77426390-77426409 None:intergenic 40.0%
! GATGTAAGTGGTTTTTCGCA+TGG - chr3_2:77430136-77430155 None:intergenic 40.0%
TCCATCATAGTCCAAAAGCA+AGG - chr3_2:77425352-77425371 None:intergenic 40.0%
GTTAACCACATCCAATTTCG+TGG - chr3_2:77430659-77430678 None:intergenic 40.0%
CTAACGGAACTCTATTACAC+TGG + chr3_2:77430896-77430915 Msa0426800:three_prime_UTR 40.0%
GGAGATAGAGATTGTCTAAC+AGG - chr3_2:77430947-77430966 None:intergenic 40.0%
CATTAAGTCTACAGACAAGC+AGG + chr3_2:77430981-77431000 Msa0426800:three_prime_UTR 40.0%
TGCACAAACATGCGTTAATC+AGG - chr3_2:77431214-77431233 None:intergenic 40.0%
TGATTAACGCATGTTTGTGC+AGG + chr3_2:77431213-77431232 Msa0426800:intron 40.0%
TTGCCTCAATGTAGATGAGA+AGG + chr3_2:77431322-77431341 Msa0426800:three_prime_UTR 40.0%
TACACAGAGTTGGGATTTGA+TGG + chr3_2:77431454-77431473 Msa0426800:intron 40.0%
ACACAGAGTTGGGATTTGAT+GGG + chr3_2:77431455-77431474 Msa0426800:intron 40.0%
TCGAGTTAACGATGTTCTTC+AGG + chr3_2:77431481-77431500 Msa0426800:three_prime_UTR 40.0%
CGAGTTAACGATGTTCTTCA+GGG + chr3_2:77431482-77431501 Msa0426800:three_prime_UTR 40.0%
! AAGGTTGTTACCTCTTTTGC+AGG + chr3_2:77431605-77431624 Msa0426800:intron 40.0%
!! ACCTCTTTTGCAGGTTTTAG+AGG + chr3_2:77431614-77431633 Msa0426800:intron 40.0%
!! ACCTCTAAAACCTGCAAAAG+AGG - chr3_2:77431618-77431637 None:intergenic 40.0%
ACCTGTGATTAACTGGGATA+AGG + chr3_2:77431641-77431660 Msa0426800:three_prime_UTR 40.0%
CCTGTGATTAACTGGGATAA+GGG + chr3_2:77431642-77431661 Msa0426800:three_prime_UTR 40.0%
CCGATCATCGCTGATAATAT+AGG - chr3_2:77431832-77431851 None:intergenic 40.0%
TATTATCAGCGATGATCGGA+TGG + chr3_2:77431833-77431852 Msa0426800:three_prime_UTR 40.0%
!! GTAATTTCTAGCTTGCTGTG+AGG + chr3_2:77431873-77431892 Msa0426800:intron 40.0%
GAGAGGGAATTAAAGGCTAT+GGG + chr3_2:77431966-77431985 Msa0426800:three_prime_UTR 40.0%
CTCTTGTCATGATTCGTTAG+AGG + chr3_2:77432030-77432049 Msa0426800:three_prime_UTR 40.0%
TACATACATTCCCGGAATCA+TGG + chr3_2:77432181-77432200 Msa0426800:intron 40.0%
ATGGAATTGACCATGATTCC+GGG - chr3_2:77432194-77432213 None:intergenic 40.0%
CATGGAATTGACCATGATTC+CGG - chr3_2:77432195-77432214 None:intergenic 40.0%
! TTTTGACCGTATAGCCAAAC+AGG - chr3_2:77432218-77432237 None:intergenic 40.0%
TCTTATGTGTGTTAACCCGT+GGG - chr3_2:77432291-77432310 None:intergenic 40.0%
ATCTTATGTGTGTTAACCCG+TGG - chr3_2:77432292-77432311 None:intergenic 40.0%
TAGAAAAAGCTTACCGCACA+GGG - chr3_2:77432336-77432355 None:intergenic 40.0%
TTAGAAAAAGCTTACCGCAC+AGG - chr3_2:77432337-77432356 None:intergenic 40.0%
GAACCCCAAACAGAAGATTA+AGG + chr3_2:77432374-77432393 Msa0426800:intron 40.0%
GTAATGAGCCCAGATGTTTA+GGG - chr3_2:77432557-77432576 None:intergenic 40.0%
TGTAATGAGCCCAGATGTTT+AGG - chr3_2:77432558-77432577 None:intergenic 40.0%
GAGAGAACATCTCTCATTGA+AGG + chr3_2:77432699-77432718 Msa0426800:intron 40.0%
ATCTCTCATTGAAGGCCTAT+CGG + chr3_2:77432707-77432726 Msa0426800:intron 40.0%
GGTATATTGGACAAGAATGC+TGG - chr3_2:77432810-77432829 None:intergenic 40.0%
TCCATCTTCAGTCTGTAGTT+TGG + chr3_2:77432836-77432855 Msa0426800:intron 40.0%
TCCAAACTACAGACTGAAGA+TGG - chr3_2:77432840-77432859 None:intergenic 40.0%
TGGTGAAGGTAAGAACATTG+TGG - chr3_2:77432874-77432893 None:intergenic 40.0%
TGATATTTACAGCTACGGAG+TGG - chr3_2:77432943-77432962 None:intergenic 40.0%
CTCATCAACTTGGAGTCTTT+CGG + chr3_2:77432968-77432987 Msa0426800:intron 40.0%
GAGCTTAAGTCTACGACTAT+TGG - chr3_2:77433314-77433333 None:intergenic 40.0%
! CCTCGCAACATTTTATTGGA+CGG - chr3_2:77433392-77433411 None:intergenic 40.0%
CAGTTATGACTACAATCCTG+TGG - chr3_2:77433435-77433454 None:intergenic 40.0%
! GTATAAGATAGCCTTAGGTG+TGG - chr3_2:77433468-77433487 None:intergenic 40.0%
TCCAACCCCACATTATAATG+GGG - chr3_2:77433515-77433534 None:intergenic 40.0%
CTTCCAACCCCACATTATAA+TGG - chr3_2:77433517-77433536 None:intergenic 40.0%
CATTATAATGTGGGGTTGGA+AGG + chr3_2:77433515-77433534 Msa0426800:intron 40.0%
GATGATTTAGAGGGTCAATG+AGG + chr3_2:77433897-77433916 Msa0426800:intron 40.0%
!! TGAGGGTGGATTTTATTGAG+AGG + chr3_2:77433915-77433934 Msa0426800:intron 40.0%
CTAGTGGTAGTAACTGTGTT+TGG + chr3_2:77433967-77433986 Msa0426800:intron 40.0%
CAAGAAATAAGGAAGTTGGG+TGG + chr3_2:77434058-77434077 Msa0426800:intron 40.0%
TATATCTGACAGGGAAGAGA+AGG + chr3_2:77434109-77434128 Msa0426800:intron 40.0%
GTCTCTACTCTCTAGTAACT+TGG + chr3_2:77434164-77434183 Msa0426800:intron 40.0%
TGTCTGCTCATACATACACA+GGG + chr3_2:77434457-77434476 Msa0426800:three_prime_UTR 40.0%
AGAAAAGGGGGATGAAACTT+GGG - chr3_2:77434561-77434580 None:intergenic 40.0%
! ACATCTCTAGAGAGAAAAGG+GGG - chr3_2:77434573-77434592 None:intergenic 40.0%
ACTTTCGTTGTTAAGGGTTC+TGG + chr3_2:77434665-77434684 Msa0426800:three_prime_UTR 40.0%
! GATATAGGGAAGCACATGTG+TGG + chr3_2:77422719-77422738 Msa0426800:five_prime_UTR 45.0%
! ATACGTGGTTTGTCAGAGGA+GGG + chr3_2:77422799-77422818 Msa0426800:five_prime_UTR 45.0%
GAAGCTTGGATGTGAACCTT+CGG + chr3_2:77423059-77423078 Msa0426800:five_prime_UTR 45.0%
TATTTCACAAGATGGGCGTC+GGG + chr3_2:77423148-77423167 Msa0426800:five_prime_UTR 45.0%
GTTTCGCATCAGTCTTTCTC+AGG + chr3_2:77423182-77423201 Msa0426800:five_prime_UTR 45.0%
ATCAGTCTTTCTCAGGGTTC+TGG + chr3_2:77423189-77423208 Msa0426800:five_prime_UTR 45.0%
! TGGTGCTAGTCTCCAGAAAA+AGG + chr3_2:77423224-77423243 Msa0426800:five_prime_UTR 45.0%
! TGAGGCGGGACAAATTTTGA+AGG + chr3_2:77423260-77423279 Msa0426800:five_prime_UTR 45.0%
TTTCAGCGTATGCAGAAGAC+TGG + chr3_2:77423501-77423520 Msa0426800:five_prime_UTR 45.0%
TTTGAAGAGCCTTCCTAGTC+GGG + chr3_2:77423617-77423636 Msa0426800:five_prime_UTR 45.0%
GAGGTCTTTGTAAGGAACAG+AGG + chr3_2:77423874-77423893 Msa0426800:five_prime_UTR 45.0%
AATAAAGAAGACGCGTGAGG+AGG - chr3_2:77423974-77423993 None:intergenic 45.0%
AGCCCACTCCTTATAAGCTT+GGG - chr3_2:77423997-77424016 None:intergenic 45.0%
!! GAGTGGGCTGTTGATCTTAT+TGG + chr3_2:77424008-77424027 Msa0426800:five_prime_UTR 45.0%
GGGCTGTTGATCTTATTGGT+AGG + chr3_2:77424012-77424031 Msa0426800:five_prime_UTR 45.0%
! CACGACCATTTTCGTAACTG+GGG - chr3_2:77424205-77424224 None:intergenic 45.0%
GGTCGTGAATCAAGAACCAA+AGG + chr3_2:77424218-77424237 Msa0426800:five_prime_UTR 45.0%
ATTGGAGCAGAAAGCCCAAA+CGG - chr3_2:77424616-77424635 None:intergenic 45.0%
!! AATTGTTTCTGCGCGTGTGT+TGG + chr3_2:77424847-77424866 Msa0426800:five_prime_UTR 45.0%
!! ATTGTTTCTGCGCGTGTGTT+GGG + chr3_2:77424848-77424867 Msa0426800:five_prime_UTR 45.0%
CAGAGCAGTATACGTGAGAA+CGG - chr3_2:77424925-77424944 None:intergenic 45.0%
AACATCCCAAGGAAGAAGAC+CGG + chr3_2:77425023-77425042 Msa0426800:five_prime_UTR 45.0%
GAATTCCGGTCTTCTTCCTT+GGG - chr3_2:77425031-77425050 None:intergenic 45.0%
AGAATTCCGGTCTTCTTCCT+TGG - chr3_2:77425032-77425051 None:intergenic 45.0%
TGATCCTTACTCTAACTGGC+TGG + chr3_2:77425158-77425177 Msa0426800:CDS 45.0%
GATACCAGCCAGTTAGAGTA+AGG - chr3_2:77425165-77425184 None:intergenic 45.0%
!! GCACTGCTTTTGGACTATGA+TGG + chr3_2:77425348-77425367 Msa0426800:intron 45.0%
!! TCTAGTTCTAGTCCTAGCAC+TGG - chr3_2:77425792-77425811 None:intergenic 45.0%
! GAATCTACTCCTTCAGGTTC+TGG - chr3_2:77426052-77426071 None:intergenic 45.0%
TTGGGATACAGACATGTCAC+CGG + chr3_2:77426090-77426109 Msa0426800:intron 45.0%
!! GCTGATGCACTTGCTTTTGT+AGG - chr3_2:77426327-77426346 None:intergenic 45.0%
AGAATATCTGCCACGCATCA+AGG - chr3_2:77426355-77426374 None:intergenic 45.0%
! TTACGCGGGTTTTCCTAAAC+TGG + chr3_2:77426547-77426566 Msa0426800:intron 45.0%
GTTGTACTGTTTCCACTTGG+TGG + chr3_2:77426901-77426920 Msa0426800:intron 45.0%
! TGTACTGTTTCCACTTGGTG+GGG + chr3_2:77426903-77426922 Msa0426800:intron 45.0%
TCGAACACAGATAGCAGACA+CGG + chr3_2:77427058-77427077 Msa0426800:intron 45.0%
GTTATCCGACGACTCAATCA+TGG + chr3_2:77427480-77427499 Msa0426800:intron 45.0%
TTGAGCCATGATTGAGTCGT+CGG - chr3_2:77427488-77427507 None:intergenic 45.0%
AGCAACCTGAAGCAAAACCA+GGG - chr3_2:77427822-77427841 None:intergenic 45.0%
AAGCAACCTGAAGCAAAACC+AGG - chr3_2:77427823-77427842 None:intergenic 45.0%
!! GTTGATAGCAGCTATATCGG+CGG + chr3_2:77428021-77428040 Msa0426800:intron 45.0%
TATATCGGCGGTCACAAACT+TGG + chr3_2:77428033-77428052 Msa0426800:intron 45.0%
!! ATGTGTTGGCTTGCTAAACC+TGG + chr3_2:77428459-77428478 Msa0426800:intron 45.0%
CTTGCTAAACCTGGATCCTA+TGG + chr3_2:77428468-77428487 Msa0426800:intron 45.0%
CAGAGCAGTATACGTGAGAA+CGG - chr3_2:77424925-77424944 None:intergenic 45.0%
TGGAAAAGTTGCAGCGGTAT+GGG - chr3_2:77428577-77428596 None:intergenic 45.0%
ACCATGTGGAAAAGTTGCAG+CGG - chr3_2:77428583-77428602 None:intergenic 45.0%
AACATCCCAAGGAAGAAGAC+CGG + chr3_2:77425023-77425042 Msa0426800:five_prime_UTR 45.0%
GAATTCCGGTCTTCTTCCTT+GGG - chr3_2:77425031-77425050 None:intergenic 45.0%
AGAATTCCGGTCTTCTTCCT+TGG - chr3_2:77425032-77425051 None:intergenic 45.0%
TGATCCTTACTCTAACTGGC+TGG + chr3_2:77425158-77425177 Msa0426800:CDS 45.0%
GATACCAGCCAGTTAGAGTA+AGG - chr3_2:77425165-77425184 None:intergenic 45.0%
AAACTGCAGAACTCGGATAC+GGG - chr3_2:77428802-77428821 None:intergenic 45.0%
TCCTGACTGTGCTTTCATGT+CGG + chr3_2:77428984-77429003 Msa0426800:CDS 45.0%
!! TCTAGTTCTAGTCCTAGCAC+TGG - chr3_2:77425792-77425811 None:intergenic 45.0%
ATTAAAACAAGAGGCGGGAC+TGG + chr3_2:77429403-77429422 Msa0426800:three_prime_UTR 45.0%
CATGAGTGTCATGGTCAAGT+TGG - chr3_2:77429487-77429506 None:intergenic 45.0%
ACTTGACCATGACACTCATG+AGG + chr3_2:77429487-77429506 Msa0426800:three_prime_UTR 45.0%
GCTATACCTCATGAGTGTCA+TGG - chr3_2:77429496-77429515 None:intergenic 45.0%
TGACACTCATGAGGTATAGC+AGG + chr3_2:77429496-77429515 Msa0426800:three_prime_UTR 45.0%
GGTTATCCTAATTCAGGTCG+TGG - chr3_2:77429622-77429641 None:intergenic 45.0%
! GAATCTACTCCTTCAGGTTC+TGG - chr3_2:77426052-77426071 None:intergenic 45.0%
ACAGACATGTCACCAGTAGA+AGG + chr3_2:77429688-77429707 Msa0426800:three_prime_UTR 45.0%
TGAATATCTGCCACGCATCA+AGG - chr3_2:77429946-77429965 None:intergenic 45.0%
!! GCCTTGCTTTTGGACTATGA+TGG + chr3_2:77430284-77430303 Msa0426800:three_prime_UTR 45.0%
TCGTGACTGTGCATTCATGT+TGG + chr3_2:77430331-77430350 Msa0426800:three_prime_UTR 45.0%
! GATGTGTGCTGCTGTTAAAG+AGG + chr3_2:77430439-77430458 Msa0426800:three_prime_UTR 45.0%
CTCTATTACACTGGTAGCCA+TGG + chr3_2:77430905-77430924 Msa0426800:three_prime_UTR 45.0%
TTACACTGGTAGCCATGGAA+TGG + chr3_2:77430910-77430929 Msa0426800:three_prime_UTR 45.0%
TAGCCATGGAATGGACATCA+TGG + chr3_2:77430919-77430938 Msa0426800:three_prime_UTR 45.0%
AGCCATGGAATGGACATCAT+GGG + chr3_2:77430920-77430939 Msa0426800:three_prime_UTR 45.0%
CCACCTCATTAATCATTGGC+AGG - chr3_2:77431137-77431156 None:intergenic 45.0%
CCTGCCAATGATTAATGAGG+TGG + chr3_2:77431134-77431153 Msa0426800:intron 45.0%
CACAGAGTTGGGATTTGATG+GGG + chr3_2:77431456-77431475 Msa0426800:intron 45.0%
AGGTCTGACCTGTGATTAAC+TGG + chr3_2:77431634-77431653 Msa0426800:three_prime_UTR 45.0%
GGTCTGACCTGTGATTAACT+GGG + chr3_2:77431635-77431654 Msa0426800:three_prime_UTR 45.0%
CCCTTATCCCAGTTAATCAC+AGG - chr3_2:77431645-77431664 None:intergenic 45.0%
TAACTGGGATAAGGGAGAAG+CGG + chr3_2:77431650-77431669 Msa0426800:three_prime_UTR 45.0%
GCTTTGCGAGAGGGAATTAA+AGG + chr3_2:77431959-77431978 Msa0426800:three_prime_UTR 45.0%
CGAGAGGGAATTAAAGGCTA+TGG + chr3_2:77431965-77431984 Msa0426800:three_prime_UTR 45.0%
TGGTCAATTCCATGCCTGTT+TGG + chr3_2:77432201-77432220 Msa0426800:intron 45.0%
TCCATGCCTGTTTGGCTATA+CGG + chr3_2:77432209-77432228 Msa0426800:intron 45.0%
TACGGTCAAAACCTTGCAGA+AGG + chr3_2:77432227-77432246 Msa0426800:intron 45.0%
CTTATGTGTGTTAACCCGTG+GGG - chr3_2:77432290-77432309 None:intergenic 45.0%
CAGTGAGGGAAATCTTACTG+AGG - chr3_2:77432512-77432531 None:intergenic 45.0%
TGCCTAATCATCCCTCTAAG+TGG + chr3_2:77432530-77432549 Msa0426800:intron 45.0%
GCCTAATCATCCCTCTAAGT+GGG + chr3_2:77432531-77432550 Msa0426800:intron 45.0%
! ATGTTTAGGGCCCACTTAGA+GGG - chr3_2:77432544-77432563 None:intergenic 45.0%
TAAGTGGGCCCTAAACATCT+GGG + chr3_2:77432546-77432565 Msa0426800:intron 45.0%
! TGACGGACAGACCTAATGAT+AGG - chr3_2:77432589-77432608 None:intergenic 45.0%
TTTGATGTAGGTGAAGGTGG+TGG - chr3_2:77432612-77432631 None:intergenic 45.0%
!!! CAGCTACGGAGTGGTTTTAA+TGG - chr3_2:77432934-77432953 None:intergenic 45.0%
TCTACGACTATTGGTACCCA+TGG - chr3_2:77433305-77433324 None:intergenic 45.0%
CCGTCCAATAAAATGTTGCG+AGG + chr3_2:77433389-77433408 Msa0426800:intron 45.0%
ATATCCCTGTGTACAACCAC+AGG + chr3_2:77433416-77433435 Msa0426800:intron 45.0%
CAATCCTGTGGTTGTACACA+GGG - chr3_2:77433423-77433442 None:intergenic 45.0%
ACAATCCTGTGGTTGTACAC+AGG - chr3_2:77433424-77433443 None:intergenic 45.0%
TCCCCATTATAATGTGGGGT+TGG + chr3_2:77433511-77433530 Msa0426800:intron 45.0%
ATTTAGAGGGTCAATGAGGG+TGG + chr3_2:77433901-77433920 Msa0426800:intron 45.0%
AGGGAAGAATTGTATGGAGC+TGG + chr3_2:77434418-77434437 Msa0426800:three_prime_UTR 45.0%
GTGTCTGCTCATACATACAC+AGG + chr3_2:77434456-77434475 Msa0426800:three_prime_UTR 45.0%
TGCTCATACATACACAGGGA+AGG + chr3_2:77434461-77434480 Msa0426800:three_prime_UTR 45.0%
GCTCATACATACACAGGGAA+GGG + chr3_2:77434462-77434481 Msa0426800:three_prime_UTR 45.0%
GAATTCTGCTGCGGATGTTA+TGG + chr3_2:77434484-77434503 Msa0426800:three_prime_UTR 45.0%
TGTCCACCTACTACTCTCAA+TGG + chr3_2:77434525-77434544 Msa0426800:three_prime_UTR 45.0%
TTCCTGCCATTGAGAGTAGT+AGG - chr3_2:77434534-77434553 None:intergenic 45.0%
AAAAGGGGGATGAAACTTGG+GGG - chr3_2:77434559-77434578 None:intergenic 45.0%
GAAAAGGGGGATGAAACTTG+GGG - chr3_2:77434560-77434579 None:intergenic 45.0%
GAGAAAAGGGGGATGAAACT+TGG - chr3_2:77434562-77434581 None:intergenic 45.0%
!! AAATATTAATTATAAATGAT+AGG + chr3_2:77427673-77427692 Msa0426800:intron 5.0%
!! TTTATTATTATTTATGAATT+AGG + chr3_2:77433738-77433757 Msa0426800:intron 5.0%
! GATACGTGGTTTGTCAGAGG+AGG + chr3_2:77422798-77422817 Msa0426800:five_prime_UTR 50.0%
GTGCGTGCAAACATTGTGCT+CGG - chr3_2:77422968-77422987 None:intergenic 50.0%
TAAGCGAGGAATGGTTGCTG+AGG + chr3_2:77423011-77423030 Msa0426800:five_prime_UTR 50.0%
GCATTGAAGGTCACAACCGA+AGG - chr3_2:77423078-77423097 None:intergenic 50.0%
! TCTTTCTCAGGGTTCTGGTC+AGG + chr3_2:77423194-77423213 Msa0426800:five_prime_UTR 50.0%
! GGTTCTGGTCAGGTTTCTGA+TGG + chr3_2:77423204-77423223 Msa0426800:five_prime_UTR 50.0%
GGTGAAGGAAATGTGTGAGG+CGG + chr3_2:77423245-77423264 Msa0426800:five_prime_UTR 50.0%
GTGAAGGAAATGTGTGAGGC+GGG + chr3_2:77423246-77423265 Msa0426800:five_prime_UTR 50.0%
ATTGAGTCGTTGTCCCGACT+AGG - chr3_2:77423633-77423652 None:intergenic 50.0%
CTTATTGGGTTCTGTCAGGC+AGG + chr3_2:77423765-77423784 Msa0426800:five_prime_UTR 50.0%
GGGAATAAAGAAGACGCGTG+AGG - chr3_2:77423977-77423996 None:intergenic 50.0%
CAGCCCACTCCTTATAAGCT+TGG - chr3_2:77423998-77424017 None:intergenic 50.0%
!! GAAGGGATAAAGGGCACCTT+TGG - chr3_2:77424237-77424256 None:intergenic 50.0%
GTTTGGGCTTTCTGCTCCAA+TGG + chr3_2:77424615-77424634 Msa0426800:intron 50.0%
TTCAGAAGCTCAACGGTCGA+TGG + chr3_2:77424718-77424737 Msa0426800:intron 50.0%
GCTACTCCAAGAGTAGTGAC+AGG + chr3_2:77424744-77424763 Msa0426800:five_prime_UTR 50.0%
!! GCGTTGGCTTGCTAAAAACC+TGG + chr3_2:77424870-77424889 Msa0426800:five_prime_UTR 50.0%
GTTGCAGCGGTATGGGAATA+AGG - chr3_2:77424981-77425000 None:intergenic 50.0%
TGGAAAGGTTGCAGCGGTAT+GGG - chr3_2:77424988-77425007 None:intergenic 50.0%
ACCATGTGGAAAGGTTGCAG+CGG - chr3_2:77424994-77425013 None:intergenic 50.0%
!! ACTGGCTTGAGCTGATGGAT+TGG + chr3_2:77425830-77425849 Msa0426800:intron 50.0%
!! GCTTGAGCTGATGGATTGGA+AGG + chr3_2:77425834-77425853 Msa0426800:intron 50.0%
!! TGTCATGGTCAAGTTGGCAG+AGG - chr3_2:77425890-77425909 None:intergenic 50.0%
CGTGAGTGTCATGGTCAAGT+TGG - chr3_2:77425896-77425915 None:intergenic 50.0%
ACTTGACCATGACACTCACG+AGG + chr3_2:77425896-77425915 Msa0426800:intron 50.0%
GCTATACCTCGTGAGTGTCA+TGG - chr3_2:77425905-77425924 None:intergenic 50.0%
TGACACTCACGAGGTATAGC+AGG + chr3_2:77425905-77425924 Msa0426800:intron 50.0%
TGCCAAAACGTCCTCCTTCA+CGG + chr3_2:77426005-77426024 Msa0426800:intron 50.0%
!! AATTCAGGTTGTGGCCGTGA+AGG - chr3_2:77426022-77426041 None:intergenic 50.0%
TCACGGCCACAACCTGAATT+AGG + chr3_2:77426022-77426041 Msa0426800:intron 50.0%
GGAGTAGATTCAGAAGAGGG+AGG + chr3_2:77426061-77426080 Msa0426800:intron 50.0%
! AGAAGAGGGAGGCACAGTTT+GGG + chr3_2:77426072-77426091 Msa0426800:intron 50.0%
ACAGACATGTCACCGGTAGA+AGG + chr3_2:77426097-77426116 Msa0426800:intron 50.0%
GGTGCAGACGTGAGATTAAC+CGG + chr3_2:77426118-77426137 Msa0426800:intron 50.0%
!! TGCAAGCACTGAATCAGTGC+CGG - chr3_2:77426140-77426159 None:intergenic 50.0%
CAAGACACTCACATGTGCGA+AGG - chr3_2:77426433-77426452 None:intergenic 50.0%
GTGAGTGTCTTGAAGTGTGC+AGG + chr3_2:77426441-77426460 Msa0426800:intron 50.0%
! GTACTGTTTCCACTTGGTGG+GGG + chr3_2:77426904-77426923 Msa0426800:intron 50.0%
! GCACCGACACTTCTGATTGA+AGG - chr3_2:77427143-77427162 None:intergenic 50.0%
GACGACTCAATCATGGCTCA+AGG + chr3_2:77427487-77427506 Msa0426800:intron 50.0%
TTGAGAAGCTCAACGGTCGA+TGG + chr3_2:77428316-77428335 Msa0426800:intron 50.0%
GCTACTCCAAGAGTAGTGAC+AGG + chr3_2:77424744-77424763 Msa0426800:five_prime_UTR 50.0%
GTTGCAGCGGTATGGGATTA+AGG - chr3_2:77428570-77428589 None:intergenic 50.0%
GTGGAAAAGTTGCAGCGGTA+TGG - chr3_2:77428578-77428597 None:intergenic 50.0%
! ACCGCTGCAACTTTTCCACA+TGG + chr3_2:77428579-77428598 Msa0426800:intron 50.0%
!! GCACTGCTTTTGGACTGTGA+TGG + chr3_2:77428937-77428956 Msa0426800:CDS 50.0%
! TCCGACATGAAAGCACAGTC+AGG - chr3_2:77425399-77425418 None:intergenic 50.0%
GAGGACTGTATACCAGTGCT+AGG + chr3_2:77429368-77429387 Msa0426800:three_prime_UTR 50.0%
!! ACTGGCTTGAGCTGATGGAT+TGG + chr3_2:77425830-77425849 Msa0426800:intron 50.0%
!! GCTTGAGCTGATGGATTGGA+AGG + chr3_2:77425834-77425853 Msa0426800:intron 50.0%
!! CATGGTCAAGTTGGCAGAGA+CGG - chr3_2:77429478-77429497 None:intergenic 50.0%
GGAGTAGATTCAGAAGAGGG+AGG + chr3_2:77426061-77426080 Msa0426800:intron 50.0%
! AGAAGAGGGAGGCACAGTTT+GGG + chr3_2:77426072-77426091 Msa0426800:intron 50.0%
TCAACTAGCACCTTGATGCG+TGG + chr3_2:77429933-77429952 Msa0426800:three_prime_UTR 50.0%
CCAGAAACTCACATGTGCGA+AGG - chr3_2:77430024-77430043 None:intergenic 50.0%
CCTTCGCACATGTGAGTTTC+TGG + chr3_2:77430021-77430040 Msa0426800:three_prime_UTR 50.0%
! GTGTGCTGCTGTTAAAGAGG+TGG + chr3_2:77430442-77430461 Msa0426800:three_prime_UTR 50.0%
! CTACAGACAAGCAGGTACTG+TGG + chr3_2:77430989-77431008 Msa0426800:intron 50.0%
ATTGGCAGGAATTCAGCAGC+AGG - chr3_2:77431123-77431142 None:intergenic 50.0%
TTCAGGGCTTTCCACGTTTG+CGG + chr3_2:77431498-77431517 Msa0426800:three_prime_UTR 50.0%
CCATGAGTTAACCGCAAACG+TGG - chr3_2:77431512-77431531 None:intergenic 50.0%
CCACGTTTGCGGTTAACTCA+TGG + chr3_2:77431509-77431528 Msa0426800:three_prime_UTR 50.0%
GCGGTTAACTCATGGTTGCA+AGG + chr3_2:77431517-77431536 Msa0426800:three_prime_UTR 50.0%
!! AGCTTGCTGTGAGGATTGTG+TGG + chr3_2:77431882-77431901 Msa0426800:intron 50.0%
AACGTAACAGGCTTTGCGAG+AGG + chr3_2:77431949-77431968 Msa0426800:intron 50.0%
ACGTAACAGGCTTTGCGAGA+GGG + chr3_2:77431950-77431969 Msa0426800:intron 50.0%
ACCGTATAGCCAAACAGGCA+TGG - chr3_2:77432213-77432232 None:intergenic 50.0%
GAGGGATGATTAGGCAGTGA+GGG - chr3_2:77432526-77432545 None:intergenic 50.0%
AGAGGGATGATTAGGCAGTG+AGG - chr3_2:77432527-77432546 None:intergenic 50.0%
GCCCACTTAGAGGGATGATT+AGG - chr3_2:77432535-77432554 None:intergenic 50.0%
! GATGTTTAGGGCCCACTTAG+AGG - chr3_2:77432545-77432564 None:intergenic 50.0%
CTAAGTGGGCCCTAAACATC+TGG + chr3_2:77432545-77432564 Msa0426800:intron 50.0%
ACCTGGAGCGATGTAACCAT+GGG + chr3_2:77433286-77433305 Msa0426800:intron 50.0%
GATTCCATGTGCCACACCTA+AGG + chr3_2:77433454-77433473 Msa0426800:intron 50.0%
! ATAGCCTTAGGTGTGGCACA+TGG - chr3_2:77433461-77433480 None:intergenic 50.0%
!! AGGAGAGTGCTGAGTTGTTG+TGG + chr3_2:77433935-77433954 Msa0426800:intron 50.0%
GTTGTGGCAGAGGAAACTAG+TGG + chr3_2:77433951-77433970 Msa0426800:intron 50.0%
CTGCCATTGAGAGTAGTAGG+TGG - chr3_2:77434531-77434550 None:intergenic 50.0%
CACCTACTACTCTCAATGGC+AGG + chr3_2:77434529-77434548 Msa0426800:three_prime_UTR 50.0%
AAAGGGGGATGAAACTTGGG+GGG - chr3_2:77434558-77434577 None:intergenic 50.0%
! ATGGGTTTTGCAAGACGGGG+AGG + chr3_2:77422593-77422612 Msa0426800:five_prime_UTR 55.0%
! TGGTTTGTCAGAGGAGGGCA+GGG + chr3_2:77422804-77422823 Msa0426800:five_prime_UTR 55.0%
CTGATCATGCTGGCGAGCTT+AGG + chr3_2:77423298-77423317 Msa0426800:five_prime_UTR 55.0%
AGTCGTTGTCCCGACTAGGA+AGG - chr3_2:77423629-77423648 None:intergenic 55.0%
GTGGAAAGGTTGCAGCGGTA+TGG - chr3_2:77424989-77425008 None:intergenic 55.0%
ACCGCTGCAACCTTTCCACA+TGG + chr3_2:77424990-77425009 Msa0426800:five_prime_UTR 55.0%
GAGGACTGTACACCAGTGCT+AGG + chr3_2:77425777-77425796 Msa0426800:intron 55.0%
!! CATGGTCAAGTTGGCAGAGG+TGG - chr3_2:77425887-77425906 None:intergenic 55.0%
! CAGAAGAGGGAGGCACAGTT+TGG + chr3_2:77426071-77426090 Msa0426800:intron 55.0%
CTCACGTCTGCACCTTCTAC+CGG - chr3_2:77426112-77426131 None:intergenic 55.0%
TGGTTCAGCTGTGGAAGCTG+AGG - chr3_2:77426209-77426228 None:intergenic 55.0%
TCAGCTAGCACCTTGATGCG+TGG + chr3_2:77426342-77426361 Msa0426800:intron 55.0%
ACTGTACTACCCCCACCAAG+TGG - chr3_2:77426916-77426935 None:intergenic 55.0%
CTCACTCAGCGAAACGACAG+AGG - chr3_2:77427009-77427028 None:intergenic 55.0%
CTGTCTCTCTTACTGCTCCC+TGG + chr3_2:77427802-77427821 Msa0426800:intron 55.0%
!!! CTGCTCCCTGGTTTTGCTTC+AGG + chr3_2:77427814-77427833 Msa0426800:intron 55.0%
TGCCAAAACGTCCTCCTCCA+CGG + chr3_2:77429596-77429615 Msa0426800:three_prime_UTR 55.0%
! CAGAAGAGGGAGGCACAGTT+TGG + chr3_2:77426071-77426090 Msa0426800:intron 55.0%
CTCACGTCTGCACCTTCTAC+TGG - chr3_2:77426112-77426131 None:intergenic 55.0%
TGGTTCAGCTGTGGAAGCTG+AGG - chr3_2:77426209-77426228 None:intergenic 55.0%
GGCCCATGATGTCCATTCCA+TGG - chr3_2:77430925-77430944 None:intergenic 55.0%
GCAGGAATTCAGCAGCAGGT+TGG - chr3_2:77431119-77431138 None:intergenic 55.0%
! TTTTTCCCCATGCGTCCCCA+CGG + chr3_2:77432272-77432291 Msa0426800:intron 55.0%
! GTAGGTGAAGGTGGTGGTGA+CGG - chr3_2:77432606-77432625 None:intergenic 55.0%
CAAGCAGACATCGAGCCGAT+AGG - chr3_2:77432725-77432744 None:intergenic 55.0%
GACCTGGAGCGATGTAACCA+TGG + chr3_2:77433285-77433304 Msa0426800:intron 55.0%
ACCCATGGTTACATCGCTCC+AGG - chr3_2:77433290-77433309 None:intergenic 55.0%
GTGCTGAGTTGTTGTGGCAG+AGG + chr3_2:77433941-77433960 Msa0426800:intron 55.0%
CAGGGAAGGGAATTCTGCTG+CGG + chr3_2:77434475-77434494 Msa0426800:three_prime_UTR 55.0%
CTGCTGCGGATGTTATGGCT+AGG + chr3_2:77434489-77434508 Msa0426800:three_prime_UTR 55.0%
TTGCAAGACGGGGAGGCTAG+AGG + chr3_2:77422600-77422619 Msa0426800:five_prime_UTR 60.0%
! GTGGTTTGTCAGAGGAGGGC+AGG + chr3_2:77422803-77422822 Msa0426800:five_prime_UTR 60.0%
TTGTCAGAGGAGGGCAGGGT+TGG + chr3_2:77422808-77422827 Msa0426800:five_prime_UTR 60.0%
! GGCCGTGAAGGAGGACGTTT+TGG - chr3_2:77426010-77426029 None:intergenic 60.0%
! TCAGGTTGTGGCCGTGAAGG+AGG - chr3_2:77426019-77426038 None:intergenic 60.0%
!! GGAAGCTGAGGCGTTGCTTC+TGG - chr3_2:77426197-77426216 None:intergenic 60.0%
AATTCAGGTCGTGGCCGTGG+AGG - chr3_2:77429613-77429632 None:intergenic 60.0%
CCTAATTCAGGTCGTGGCCG+TGG - chr3_2:77429616-77429635 None:intergenic 60.0%
CCACGGCCACGACCTGAATT+AGG + chr3_2:77429613-77429632 Msa0426800:three_prime_UTR 60.0%
!! GGAAGCTGAGGCGTTGCTTC+TGG - chr3_2:77426197-77426216 None:intergenic 60.0%
! TTTTCCCCATGCGTCCCCAC+GGG + chr3_2:77432273-77432292 Msa0426800:intron 60.0%
TTAACCCGTGGGGACGCATG+GGG - chr3_2:77432280-77432299 None:intergenic 60.0%
GTTAACCCGTGGGGACGCAT+GGG - chr3_2:77432281-77432300 None:intergenic 60.0%
TGTTAACCCGTGGGGACGCA+TGG - chr3_2:77432282-77432301 None:intergenic 60.0%
!! GAGGGCAGGGTTGGTGAAGC+TGG + chr3_2:77422817-77422836 Msa0426800:five_prime_UTR 65.0%
TCTGCGCGTGTGTTGGGCGT+TGG + chr3_2:77424854-77424873 Msa0426800:five_prime_UTR 65.0%
!! GCGGGACTGGCTTGAGCTGA+TGG + chr3_2:77425825-77425844 Msa0426800:intron 65.0%
!! GCGGGACTGGCTTGAGCTGA+TGG + chr3_2:77425825-77425844 Msa0426800:intron 65.0%
! GGCCGTGGAGGAGGACGTTT+TGG - chr3_2:77429601-77429620 None:intergenic 65.0%
TCAGGTCGTGGCCGTGGAGG+AGG - chr3_2:77429610-77429629 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 77422584 77434833 77422584 ID=Msa0426800;Name=Msa0426800
chr3_2 mRNA 77422584 77434833 77422584 ID=Msa0426800-mRNA-1;Parent=Msa0426800;Name=Msa0426800-mRNA-1;_AED=0.22;_eAED=0.22;_QI=2056|0.84|0.92|1|0.23|0.35|14|2229|102
chr3_2 exon 77422584 77424239 77422584 ID=Msa0426800-mRNA-1:exon:20167;Parent=Msa0426800-mRNA-1
chr3_2 exon 77424723 77425179 77424723 ID=Msa0426800-mRNA-1:exon:20168;Parent=Msa0426800-mRNA-1
chr3_2 exon 77425504 77425575 77425504 ID=Msa0426800-mRNA-1:exon:20169;Parent=Msa0426800-mRNA-1
chr3_2 exon 77428907 77429011 77428907 ID=Msa0426800-mRNA-1:exon:20170;Parent=Msa0426800-mRNA-1
chr3_2 exon 77429093 77429171 77429093 ID=Msa0426800-mRNA-1:exon:20171;Parent=Msa0426800-mRNA-1
chr3_2 exon 77429319 77430511 77429319 ID=Msa0426800-mRNA-1:exon:20172;Parent=Msa0426800-mRNA-1
chr3_2 exon 77430879 77431002 77430879 ID=Msa0426800-mRNA-1:exon:20173;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431096 77431152 77431096 ID=Msa0426800-mRNA-1:exon:20174;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431235 77431343 77431235 ID=Msa0426800-mRNA-1:exon:20175;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431461 77431538 77431461 ID=Msa0426800-mRNA-1:exon:20176;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431627 77431700 77431627 ID=Msa0426800-mRNA-1:exon:20177;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431803 77431872 77431803 ID=Msa0426800-mRNA-1:exon:20178;Parent=Msa0426800-mRNA-1
chr3_2 exon 77431959 77432051 77431959 ID=Msa0426800-mRNA-1:exon:20179;Parent=Msa0426800-mRNA-1
chr3_2 exon 77434407 77434833 77434407 ID=Msa0426800-mRNA-1:exon:20180;Parent=Msa0426800-mRNA-1
chr3_2 five_prime_UTR 77422584 77424239 77422584 ID=Msa0426800-mRNA-1:five_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 five_prime_UTR 77424723 77425122 77424723 ID=Msa0426800-mRNA-1:five_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 CDS 77425123 77425179 77425123 ID=Msa0426800-mRNA-1:cds;Parent=Msa0426800-mRNA-1
chr3_2 CDS 77425504 77425575 77425504 ID=Msa0426800-mRNA-1:cds;Parent=Msa0426800-mRNA-1
chr3_2 CDS 77428907 77429011 77428907 ID=Msa0426800-mRNA-1:cds;Parent=Msa0426800-mRNA-1
chr3_2 CDS 77429093 77429167 77429093 ID=Msa0426800-mRNA-1:cds;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77429168 77429171 77429168 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77429319 77430511 77429319 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77430879 77431002 77430879 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431096 77431152 77431096 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431235 77431343 77431235 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431461 77431538 77431461 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431627 77431700 77431627 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431803 77431872 77431803 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77431959 77432051 77431959 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
chr3_2 three_prime_UTR 77434407 77434833 77434407 ID=Msa0426800-mRNA-1:three_prime_utr;Parent=Msa0426800-mRNA-1
Gene Sequence

>Msa0426800

ATGGATGTTAATCATGGTTTCACATCATCTGAAACTGATCCTTACTCTAACTGGCTGATGTGTGCTGCTGTTAAAAAGGTCGCAGAGTATTTTCCAACAACAATAACTTGTCTAAGAAGTCATGACAAGATTAGGAACTTTGCAAAAGGCAAAATAATTGCACTGCTTTTGGACTGTGATGGAAAATTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCGGACAATATGTGTGCTGCTGTTAAAAAGGTTGCAGAGTATTTTCCAACAACAATAACTTGTCTAAGAAGTAAGAAATCATGA
Protein sequence

>Msa0426800

MDVNHGFTSSETDPYSNWLMCAAVKKVAEYFPTTITCLRSHDKIRNFAKGKIIALLLDCDGKFSPIVDNPDCAFMSDNMCAAVKKVAEYFPTTITCLRSKKS*