Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377550 | XP_024636878.1 | 43.125 | 320 | 46 | 9 | 2 | 212 | 77 | 369 | 1.03e-60 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377550 | sp|O64896|TPPA_ARATH | 33.835 | 266 | 65 | 6 | 52 | 212 | 112 | 371 | 3.86e-34 | 128 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377550 | A0A072UK12 | 43.125 | 320 | 46 | 9 | 2 | 212 | 77 | 369 | 4.92e-61 | 205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015120 | Msa0377550 | 0.810784 | 9.702950e-51 | -8.615850e-47 |
| Msa0064290 | Msa0377550 | 0.812537 | 4.032644e-51 | -8.615850e-47 |
| Msa0084080 | Msa0377550 | 0.802553 | 5.313031e-49 | -8.615850e-47 |
| Msa0191250 | Msa0377550 | 0.802943 | 4.413433e-49 | -8.615850e-47 |
| Msa0195000 | Msa0377550 | 0.815842 | 7.513963e-52 | -8.615850e-47 |
| Msa0212990 | Msa0377550 | 0.812431 | 4.253668e-51 | -8.615850e-47 |
| Msa0377550 | Msa0410500 | 0.816866 | 4.434383e-52 | -8.615850e-47 |
| Msa0377550 | Msa0412440 | 0.803461 | 3.448610e-49 | -8.615850e-47 |
| Msa0377550 | Msa0426800 | 0.855931 | 4.530239e-62 | -8.615850e-47 |
| Msa0377550 | Msa0456910 | 0.816927 | 4.295398e-52 | -8.615850e-47 |
| Msa0377550 | Msa0480000 | 0.800804 | 1.213587e-48 | -8.615850e-47 |
| Msa0377550 | Msa0512870 | 0.825663 | 4.146311e-54 | -8.615850e-47 |
| Msa0377550 | Msa0631200 | 0.801956 | 7.050406e-49 | -8.615850e-47 |
| Msa0377550 | Msa0648880 | 0.823896 | 1.082318e-53 | -8.615850e-47 |
| Msa0377550 | Msa0657610 | 0.804115 | 2.521597e-49 | -8.615850e-47 |
| Msa0377550 | Msa0669440 | 0.801529 | 8.624649e-49 | -8.615850e-47 |
| Msa0377550 | Msa0691380 | 0.826910 | 2.093090e-54 | -8.615850e-47 |
| Msa0377550 | Msa0692230 | 0.808710 | 2.709475e-50 | -8.615850e-47 |
| Msa0377550 | Msa0711790 | 0.819792 | 9.640167e-53 | -8.615850e-47 |
| Msa0377550 | Msa0784380 | 0.818187 | 2.233846e-52 | -8.615850e-47 |
| Msa0377550 | Msa0824660 | 0.825798 | 3.850392e-54 | -8.615850e-47 |
| Msa0377550 | Msa0829620 | 0.806609 | 7.571405e-50 | -8.615850e-47 |
| Msa0377550 | Msa0830530 | 0.819026 | 1.441322e-52 | -8.615850e-47 |
| Msa0377550 | Msa0863930 | 0.800509 | 1.394312e-48 | -8.615850e-47 |
| Msa0377550 | Msa0867890 | 0.805536 | 1.273370e-49 | -8.615850e-47 |
| Msa0377550 | Msa0895790 | 0.823253 | 1.530252e-53 | -8.615850e-47 |
| Msa0377550 | Msa0900620 | 0.801659 | 8.112274e-49 | -8.615850e-47 |
| Msa0377550 | Msa0908050 | 0.806163 | 9.399317e-50 | -8.615850e-47 |
| Msa0377550 | Msa1036410 | 0.808788 | 2.606848e-50 | -8.615850e-47 |
| Msa0377550 | Msa1079860 | 0.803444 | 3.476325e-49 | -8.615850e-47 |
| Msa0377550 | Msa1203250 | 0.809604 | 1.742651e-50 | -8.615850e-47 |
| Msa0377550 | Msa1224830 | 0.804098 | 2.543034e-49 | -8.615850e-47 |
| Msa0377550 | Msa1279600 | 0.803249 | 3.815050e-49 | -8.615850e-47 |
| Msa0377550 | Msa1286610 | 0.805895 | 1.070064e-49 | -8.615850e-47 |
| Msa0377550 | Msa1306390 | 0.801428 | 9.045778e-49 | -8.615850e-47 |
| Msa0377550 | Msa1320740 | 0.807652 | 4.551975e-50 | -8.615850e-47 |
| Msa0377550 | Msa1445080 | 0.813039 | 3.131651e-51 | -8.615850e-47 |
| Msa0241470 | Msa0377550 | 0.828404 | 9.161787e-55 | -8.615850e-47 |
| Msa0253290 | Msa0377550 | 0.819519 | 1.112927e-52 | -8.615850e-47 |
| Msa0279220 | Msa0377550 | 0.821295 | 4.355467e-53 | -8.615850e-47 |
| Msa0292120 | Msa0377550 | 0.818595 | 1.805729e-52 | -8.615850e-47 |
| Msa0302980 | Msa0377550 | 0.801541 | 8.578732e-49 | -8.615850e-47 |
| Msa0311860 | Msa0377550 | 0.811522 | 6.713168e-51 | -8.615850e-47 |
| Msa0321860 | Msa0377550 | 0.811255 | 7.671755e-51 | -8.615850e-47 |
| Msa0330340 | Msa0377550 | 0.805745 | 1.150868e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377550 | MtrunA17_Chr4g0018441 | 43.125 | 320 | 46 | 9 | 2 | 212 | 77 | 369 | 9.48e-65 | 205 |
| Msa0377550 | MtrunA17_Chr3g0079281 | 35.312 | 320 | 71 | 8 | 1 | 212 | 82 | 373 | 7.31e-47 | 159 |
| Msa0377550 | MtrunA17_Chr4g0056481 | 32.090 | 268 | 67 | 5 | 52 | 212 | 112 | 371 | 4.51e-32 | 120 |
| Msa0377550 | MtrunA17_Chr4g0018781 | 52.525 | 99 | 28 | 3 | 2 | 100 | 14 | 93 | 9.88e-24 | 91.3 |
| Msa0377550 | MtrunA17_Chr8g0382441 | 29.057 | 265 | 70 | 5 | 52 | 212 | 96 | 346 | 2.31e-23 | 95.9 |
| Msa0377550 | MtrunA17_Chr5g0425711 | 29.057 | 265 | 67 | 6 | 52 | 211 | 111 | 359 | 2.80e-19 | 84.7 |
| Msa0377550 | MtrunA17_Chr3g0115661 | 27.969 | 261 | 68 | 5 | 56 | 211 | 102 | 347 | 4.74e-19 | 84.3 |
| Msa0377550 | MtrunA17_Chr8g0347141 | 34.328 | 134 | 42 | 3 | 52 | 153 | 39 | 158 | 1.41e-14 | 71.2 |
| Msa0377550 | MtrunA17_Chr3g0126491 | 35.714 | 140 | 57 | 4 | 52 | 165 | 83 | 215 | 2.15e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377550 | AT5G51460.2 | 33.835 | 266 | 65 | 6 | 52 | 212 | 111 | 370 | 3.70e-35 | 128 |
| Msa0377550 | AT5G51460.4 | 33.835 | 266 | 65 | 6 | 52 | 212 | 111 | 370 | 3.70e-35 | 128 |
| Msa0377550 | AT5G51460.1 | 33.835 | 266 | 65 | 6 | 52 | 212 | 112 | 371 | 3.92e-35 | 128 |
| Msa0377550 | AT5G51460.5 | 33.835 | 266 | 65 | 6 | 52 | 212 | 112 | 371 | 3.92e-35 | 128 |
| Msa0377550 | AT5G51460.3 | 33.835 | 266 | 65 | 6 | 52 | 212 | 112 | 371 | 3.92e-35 | 128 |
| Msa0377550 | AT4G22590.1 | 33.462 | 260 | 64 | 4 | 56 | 211 | 103 | 357 | 8.65e-34 | 124 |
| Msa0377550 | AT4G12430.1 | 32.016 | 253 | 57 | 5 | 63 | 211 | 107 | 348 | 4.55e-28 | 109 |
| Msa0377550 | AT1G78090.2 | 27.652 | 264 | 71 | 5 | 52 | 211 | 109 | 356 | 8.44e-22 | 92.0 |
| Msa0377550 | AT1G78090.1 | 27.652 | 264 | 71 | 5 | 52 | 211 | 109 | 356 | 9.66e-22 | 92.0 |
| Msa0377550 | AT5G10100.4 | 29.796 | 245 | 73 | 5 | 52 | 212 | 115 | 344 | 2.56e-21 | 90.9 |
| Msa0377550 | AT4G39770.2 | 29.167 | 264 | 70 | 7 | 52 | 211 | 82 | 332 | 1.38e-20 | 88.6 |
| Msa0377550 | AT4G39770.1 | 29.057 | 265 | 71 | 7 | 52 | 212 | 82 | 333 | 1.63e-20 | 88.6 |
| Msa0377550 | AT5G65140.1 | 26.950 | 282 | 85 | 7 | 38 | 215 | 94 | 358 | 4.42e-19 | 84.7 |
| Msa0377550 | AT5G10100.3 | 27.547 | 265 | 73 | 5 | 52 | 212 | 104 | 353 | 1.81e-18 | 82.8 |
| Msa0377550 | AT5G10100.1 | 27.547 | 265 | 73 | 5 | 52 | 212 | 115 | 364 | 2.01e-18 | 82.8 |
| Msa0377550 | AT1G35910.1 | 25.081 | 307 | 90 | 6 | 9 | 211 | 81 | 351 | 5.87e-18 | 81.6 |
| Msa0377550 | AT2G22190.1 | 28.731 | 268 | 65 | 7 | 52 | 212 | 90 | 338 | 6.07e-18 | 81.3 |
| Msa0377550 | AT5G10100.2 | 27.239 | 268 | 76 | 5 | 52 | 215 | 104 | 356 | 6.54e-18 | 81.3 |
| Msa0377550 | AT2G22190.2 | 28.731 | 268 | 65 | 7 | 52 | 212 | 90 | 338 | 7.58e-18 | 80.9 |
| Msa0377550 | AT5G65140.3 | 28.856 | 201 | 70 | 5 | 38 | 181 | 94 | 278 | 1.56e-17 | 80.1 |
| Msa0377550 | AT5G65140.2 | 28.856 | 201 | 70 | 5 | 38 | 181 | 94 | 278 | 1.74e-17 | 79.7 |
| Msa0377550 | AT1G22210.1 | 27.807 | 187 | 60 | 3 | 52 | 181 | 58 | 226 | 1.58e-15 | 74.3 |
Find 175 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGAAGATGATGCCTTTA+AGG | 0.122362 | 3_1:-78099566 | Msa0377550:five_prime_UTR |
| AGCTATTCCTCTCTTATTAA+TGG | 0.136743 | 3_1:-78100363 | Msa0377550:five_prime_UTR |
| CCATATACAATTCTACTTAT+TGG | 0.138703 | 3_1:-78099292 | Msa0377550:five_prime_UTR |
| ACGGGCATTCAGTCTTTATT+TGG | 0.167173 | 3_1:-78099452 | Msa0377550:five_prime_UTR |
| TGAGTTCATACATTATATTT+TGG | 0.177212 | 3_1:-78093428 | Msa0377550:three_prime_UTR |
| TCTTGTAATGTTGTTCTTAA+TGG | 0.177823 | 3_1:-78100468 | None:intergenic |
| CAAAATAATTGCCTTGCTTT+TGG | 0.197948 | 3_1:-78095225 | Msa0377550:CDS |
| CATATACAATTCTACTTATT+GGG | 0.225786 | 3_1:-78099291 | Msa0377550:five_prime_UTR |
| CAAATTCTTCTGAATTTAAA+TGG | 0.226951 | 3_1:+78098990 | None:intergenic |
| ACCTTCAATGCGCTTATAAA+TGG | 0.247175 | 3_1:-78099955 | Msa0377550:five_prime_UTR |
| CTTGTAATGTTGTTCTTAAT+GGG | 0.269993 | 3_1:-78100467 | None:intergenic |
| GCTTTGCGAGAGGGAATTAA+AGG | 0.273294 | 3_1:-78093540 | Msa0377550:CDS |
| TCTTTATTCCCAAGCTTATA+AGG | 0.274627 | 3_1:-78099056 | Msa0377550:five_prime_UTR |
| TCGAGTTAACGATGTTCTTC+AGG | 0.277012 | 3_1:-78094018 | Msa0377550:CDS |
| GTAGACTTAATGATACAATT+AGG | 0.297478 | 3_1:+78094529 | Msa0377540:intron |
| GAGTGGGCTGTTGATCTTAT+TGG | 0.313477 | 3_1:-78099034 | Msa0377550:five_prime_UTR |
| CTCTTGTCATGATTCGTTAG+AGG | 0.328918 | 3_1:-78093469 | Msa0377550:CDS |
| GGAGATAGAGATTGTCTAAC+AGG | 0.334217 | 3_1:+78094555 | Msa0377540:CDS |
| AATATCCCCAGTTACGAAAA+TGG | 0.334544 | 3_1:-78098845 | Msa0377550:five_prime_UTR |
| GTTGCAGCGGTATGGGAATA+AGG | 0.338961 | 3_1:+78098064 | None:intergenic |
| ATTGGTAGGATGGAATCTTT+TGG | 0.341810 | 3_1:-78099016 | Msa0377550:five_prime_UTR |
| TATATTGCATTGCTTTCCTT+TGG | 0.342098 | 3_1:+78093492 | Msa0377540:intron |
| TGCTACAATGCTGTAATTCA+AGG | 0.345764 | 3_1:-78100153 | Msa0377550:five_prime_UTR |
| AGAATTCCGGTCTTCTTCCT+TGG | 0.350126 | 3_1:+78098013 | None:intergenic |
| CCAATAAGTAGAATTGTATA+TGG | 0.352188 | 3_1:+78099292 | None:intergenic |
| TATACAGAGTTGGGATTTGA+TGG | 0.352873 | 3_1:-78094045 | Msa0377550:intron |
| CTTAGACAAGTTATTGTTGT+TGG | 0.354678 | 3_1:+78097501 | None:intergenic |
| GATTCGAGGTTTACTTGAAC+TGG | 0.358191 | 3_1:-78099344 | Msa0377550:five_prime_UTR |
| AAACTGATCCTTACTCTAAC+TGG | 0.370061 | 3_1:-78097887 | Msa0377550:CDS |
| GTTTCGCATCAGTCTTTCTC+AGG | 0.370751 | 3_1:-78099860 | Msa0377550:five_prime_UTR |
| TGGTGCTAGTCTCCAGAAAA+AGG | 0.371648 | 3_1:-78099818 | Msa0377550:five_prime_UTR |
| GAATTCCGGTCTTCTTCCTT+GGG | 0.376316 | 3_1:+78098014 | None:intergenic |
| GATGAAAGAGTTTCTTTATG+TGG | 0.384284 | 3_1:-78098878 | Msa0377550:five_prime_UTR |
| ATCAGTCTTTCTCAGGGTTC+TGG | 0.388972 | 3_1:-78099853 | Msa0377550:five_prime_UTR |
| ATGGGAATAAGGCAACAAAT+TGG | 0.389392 | 3_1:+78098075 | None:intergenic |
| TCTTTCTCAGGGTTCTGGTC+AGG | 0.394353 | 3_1:-78099848 | Msa0377550:five_prime_UTR |
| CGCTATAATGATACGTGGTT+TGG | 0.396601 | 3_1:-78100253 | Msa0377550:five_prime_UTR |
| TCCATTTATAAGCGCATTGA+AGG | 0.402726 | 3_1:+78099954 | None:intergenic |
| TTGGCAGAGGAGGGCAGGGT+TGG | 0.404298 | 3_1:-78100234 | Msa0377550:five_prime_UTR |
| CATCCATTTGTTATATTCTC+CGG | 0.404923 | 3_1:+78097934 | None:intergenic |
| AGGCAAAAGAATTATTTAAT+CGG | 0.405224 | 3_1:-78100011 | Msa0377550:five_prime_UTR |
| AAAGAATTTATTTCACAAGA+TGG | 0.406959 | 3_1:-78099902 | Msa0377550:five_prime_UTR |
| TTTGAAGAGCCTTCCTAGTC+GGG | 0.414147 | 3_1:-78099425 | Msa0377550:five_prime_UTR |
| TTTACTTGAACTGGACTTCA+AGG | 0.417481 | 3_1:-78099335 | Msa0377550:five_prime_UTR |
| GTGGTTTGGCAGAGGAGGGC+AGG | 0.418713 | 3_1:-78100239 | Msa0377550:five_prime_UTR |
| ATTGTTTCTGCGCGTGTGTT+GGG | 0.421017 | 3_1:-78098194 | Msa0377550:five_prime_UTR |
| TTCAGGGCTTTCCACGTTTG+CGG | 0.421400 | 3_1:-78094001 | Msa0377550:CDS |
| CGAGAGGGAATTAAAGGCTA+TGG | 0.422618 | 3_1:-78093534 | Msa0377550:CDS |
| GTGGTATACCAAGATGTTTA+AGG | 0.424247 | 3_1:-78100304 | Msa0377550:five_prime_UTR |
| GAGGGCAGGGTTGGTGAAGC+TGG | 0.435161 | 3_1:-78100225 | Msa0377550:five_prime_UTR |
| AGGAGGTGATTACAAATCAT+TGG | 0.435432 | 3_1:+78099088 | None:intergenic |
| TAACAAATGGATGTTAATCA+TGG | 0.436181 | 3_1:-78097924 | Msa0377550:exon |
| TAGACTTAATGATACAATTA+GGG | 0.440809 | 3_1:+78094530 | Msa0377540:intron |
| GTGGAAAGGTTGCAGCGGTA+TGG | 0.442610 | 3_1:+78098056 | None:intergenic |
| TGAAGCTGGTAAGATGTTAG+AGG | 0.444705 | 3_1:-78100211 | Msa0377550:five_prime_UTR |
| AATTGTTTCTGCGCGTGTGT+TGG | 0.446903 | 3_1:-78098195 | Msa0377550:five_prime_UTR |
| TGGAGCTAACTTAAAATCTC+TGG | 0.447231 | 3_1:+78099312 | None:intergenic |
| CTGATCATGCTGGCGAGCTT+AGG | 0.452443 | 3_1:-78099744 | Msa0377550:five_prime_UTR |
| CGAGTTAACGATGTTCTTCA+GGG | 0.454655 | 3_1:-78094017 | Msa0377550:CDS |
| AAGAATTTATTTCACAAGAT+GGG | 0.460371 | 3_1:-78099901 | Msa0377550:five_prime_UTR |
| CAGCCCACTCCTTATAAGCT+TGG | 0.460498 | 3_1:+78099047 | None:intergenic |
| ATTCAAGGTTTATGTGATGT+AGG | 0.461091 | 3_1:-78100138 | Msa0377550:five_prime_UTR |
| TGGATCTGAAGATGATTTCA+TGG | 0.464034 | 3_1:+78097957 | None:intergenic |
| CCACGTTTGCGGTTAACTCA+TGG | 0.466966 | 3_1:-78093990 | Msa0377550:CDS |
| AGCCCACTCCTTATAAGCTT+GGG | 0.468733 | 3_1:+78099048 | None:intergenic |
| TCACCCGATAGTGTTACATA+TGG | 0.470678 | 3_1:-78099619 | Msa0377550:five_prime_UTR |
| GGTTCTGGTCAGGTTTCTGA+TGG | 0.472493 | 3_1:-78099838 | Msa0377550:five_prime_UTR |
| CTCTATTACACTGGTAGCCA+TGG | 0.473628 | 3_1:-78094594 | Msa0377550:CDS |
| TGGAAAGGTTGCAGCGGTAT+GGG | 0.480669 | 3_1:+78098057 | None:intergenic |
| TCTACTTATTGGGTTCTGTC+AGG | 0.481406 | 3_1:-78099281 | Msa0377550:five_prime_UTR |
| TCTGCGCGTGTGTTGGGCGT+TGG | 0.484041 | 3_1:-78098188 | Msa0377550:five_prime_UTR |
| CAAATTAGGAACTTCGCAAA+AGG | 0.485141 | 3_1:-78095248 | Msa0377550:intron |
| CCACCGGAGAATATAACAAA+TGG | 0.487048 | 3_1:-78097937 | Msa0377550:exon |
| TTTGATCAGAGGTCTTTGTA+AGG | 0.487255 | 3_1:-78099176 | Msa0377550:five_prime_UTR |
| AATTCATGTCCATAGGATCC+AGG | 0.488795 | 3_1:+78098154 | None:intergenic |
| GTGTGGTTAATAAAGAAAGA+TGG | 0.491829 | 3_1:-78100405 | Msa0377550:five_prime_UTR |
| CAGTCACGATTATACACAAT+TGG | 0.492029 | 3_1:+78095182 | None:intergenic |
| GTCCCATATGTAACACTATC+GGG | 0.496756 | 3_1:+78099616 | None:intergenic |
| GATACCAGCCAGTTAGAGTA+AGG | 0.498408 | 3_1:+78097879 | None:intergenic |
| GCATTGTAGCAATAAGCATC+AGG | 0.500049 | 3_1:+78100165 | None:intergenic |
| AATCCCCTCCTTAAACATCT+TGG | 0.502367 | 3_1:+78100296 | None:intergenic |
| CTTATTGGGTTCTGTCAGGC+AGG | 0.502549 | 3_1:-78099277 | Msa0377550:five_prime_UTR |
| GATGTGTGCTGCTGTTAAAA+AGG | 0.503422 | 3_1:-78097538 | Msa0377550:CDS |
| TTTAATCGGATGGAGAAGCT+TGG | 0.506864 | 3_1:-78099997 | Msa0377550:five_prime_UTR |
| ATAGCGTACAAAACAACATC+AGG | 0.507613 | 3_1:+78100270 | None:intergenic |
| TTTCAGCGTATGCAGAAGAC+TGG | 0.507756 | 3_1:-78099541 | Msa0377550:five_prime_UTR |
| TGGTTTGGCAGAGGAGGGCA+GGG | 0.507872 | 3_1:-78100238 | Msa0377550:five_prime_UTR |
| TTAGAGGAGATGACTCAGAT+AGG | 0.509426 | 3_1:-78100195 | Msa0377550:five_prime_UTR |
| TTCCCAAGCTTATAAGGAGT+GGG | 0.514236 | 3_1:-78099050 | Msa0377550:five_prime_UTR |
| CTAACGGAACTCTATTACAC+TGG | 0.517755 | 3_1:-78094603 | Msa0377550:CDS |
| GTATCCACCTCATTAATCAT+TGG | 0.519216 | 3_1:+78094361 | Msa0377540:intron |
| TATTTCACAAGATGGGCGTC+GGG | 0.520581 | 3_1:-78099894 | Msa0377550:five_prime_UTR |
| CCACCTCATTAATCATTGGC+AGG | 0.524619 | 3_1:+78094365 | Msa0377540:intron |
| AACGTTACGATCCAAGCAAA+AGG | 0.525354 | 3_1:+78099687 | None:intergenic |
| AAAAGAATTATTTAATCGGA+TGG | 0.528103 | 3_1:-78100007 | Msa0377550:five_prime_UTR |
| TTTAGTGTCTTCAGAACCAA+AGG | 0.529083 | 3_1:-78093508 | Msa0377550:CDS |
| ATACAGAGTTGGGATTTGAT+GGG | 0.537639 | 3_1:-78094044 | Msa0377550:intron |
| GTGAAGGAAATGTGTGAGGC+GGG | 0.543604 | 3_1:-78099796 | Msa0377550:five_prime_UTR |
| ATTCCCAAGCTTATAAGGAG+TGG | 0.543611 | 3_1:-78099051 | Msa0377550:five_prime_UTR |
| TAGCCATGGAATGGACATCA+TGG | 0.544453 | 3_1:-78094580 | Msa0377550:CDS |
| TTTCGCATCAGTCTTTCTCA+GGG | 0.545930 | 3_1:-78099859 | Msa0377550:five_prime_UTR |
| GAAGCTTGGATGTGAACCTT+CGG | 0.546553 | 3_1:-78099983 | Msa0377550:five_prime_UTR |
| TGTTGATCTTATTGGTAGGA+TGG | 0.548501 | 3_1:-78099026 | Msa0377550:five_prime_UTR |
| AAATTGGAACAAGTGATTCG+AGG | 0.553367 | 3_1:-78099358 | Msa0377550:five_prime_UTR |
| ATTGGCAGGAATTCAGCAGC+AGG | 0.554542 | 3_1:+78094379 | Msa0377540:intron |
| TGTCCCATATGTAACACTAT+CGG | 0.555468 | 3_1:+78099615 | None:intergenic |
| TTCAGAAGCTCAACGGTCGA+TGG | 0.560370 | 3_1:-78098324 | Msa0377550:intron |
| GAGAGGGAATTAAAGGCTAT+GGG | 0.560447 | 3_1:-78093533 | Msa0377550:CDS |
| TTATTTCACAAGATGGGCGT+CGG | 0.560926 | 3_1:-78099895 | Msa0377550:five_prime_UTR |
| TAGAAAGAACAAGGTCTCAC+GGG | 0.563854 | 3_1:-78099470 | Msa0377550:five_prime_UTR |
| GAAATCATCTTCAGATCCAC+CGG | 0.564366 | 3_1:-78097953 | Msa0377550:five_prime_UTR |
| CATATGGGACAATTATCAAA+GGG | 0.564621 | 3_1:-78099603 | Msa0377550:five_prime_UTR |
| ATTTGAAGAGCCTTCCTAGT+CGG | 0.565150 | 3_1:-78099426 | Msa0377550:five_prime_UTR |
| GCGGTTAACTCATGGTTGCA+AGG | 0.565697 | 3_1:-78093982 | Msa0377550:intron |
| ACATATGGGACAATTATCAA+AGG | 0.566814 | 3_1:-78099604 | Msa0377550:five_prime_UTR |
| AACATCCCAAGGAAGAAGAC+CGG | 0.566931 | 3_1:-78098019 | Msa0377550:five_prime_UTR |
| CATTAAGTCTACAGACAAGC+AGG | 0.567188 | 3_1:-78094518 | Msa0377550:CDS |
| CACCCGATAGTGTTACATAT+GGG | 0.567559 | 3_1:-78099618 | Msa0377550:five_prime_UTR |
| GCAGGAATTCAGCAGCAGGT+TGG | 0.569824 | 3_1:+78094383 | Msa0377540:intron |
| GGCCCATGATGTCCATTCCA+TGG | 0.570158 | 3_1:+78094577 | Msa0377540:CDS |
| AATGATACGTGGTTTGGCAG+AGG | 0.572081 | 3_1:-78100247 | Msa0377550:five_prime_UTR |
| TACAGAGTTGGGATTTGATG+GGG | 0.578851 | 3_1:-78094043 | Msa0377550:intron |
| TTACACTGGTAGCCATGGAA+TGG | 0.580251 | 3_1:-78094589 | Msa0377550:CDS |
| ACGTAACAGGCTTTGCGAGA+GGG | 0.583395 | 3_1:-78093549 | Msa0377550:intron |
| GATACGTGGTTTGGCAGAGG+AGG | 0.585481 | 3_1:-78100244 | Msa0377550:five_prime_UTR |
| ATACCAAGATGTTTAAGGAG+GGG | 0.586099 | 3_1:-78100299 | Msa0377550:five_prime_UTR |
| TTGCAAGACGGGGAGGCTAG+AGG | 0.587832 | 3_1:-78100442 | Msa0377550:five_prime_UTR |
| TGATTTGAATTCATGTCCAT+AGG | 0.588247 | 3_1:+78098147 | None:intergenic |
| CCATGAGTTAACCGCAAACG+TGG | 0.590717 | 3_1:+78093990 | Msa0377540:intron |
| GGGCTGTTGATCTTATTGGT+AGG | 0.593411 | 3_1:-78099030 | Msa0377550:five_prime_UTR |
| CAATAGCATACCATGTGGAA+AGG | 0.597956 | 3_1:+78098042 | None:intergenic |
| AAGTTAATCACTGATCATGC+TGG | 0.600386 | 3_1:-78099754 | Msa0377550:five_prime_UTR |
| CTGCTCTGATAACAAACTCA+AGG | 0.600637 | 3_1:-78098105 | Msa0377550:five_prime_UTR |
| TGATCCTTACTCTAACTGGC+TGG | 0.602267 | 3_1:-78097883 | Msa0377550:intron |
| ACAGGAAAACATTGAAGAGG+TGG | 0.602297 | 3_1:-78098280 | Msa0377550:five_prime_UTR |
| CTTAATGATACAATTAGGGT+GGG | 0.603401 | 3_1:+78094534 | Msa0377540:CDS |
| CCATTTGTTATATTCTCCGG+TGG | 0.604864 | 3_1:+78097937 | None:intergenic |
| ATTGAGTCGTTGTCCCGACT+AGG | 0.608817 | 3_1:+78099412 | None:intergenic |
| CAGAGCAGTATACGTGAGAA+CGG | 0.611688 | 3_1:+78098120 | None:intergenic |
| GCTACTCCAAGAGTAGTGAC+AGG | 0.614933 | 3_1:-78098298 | Msa0377550:five_prime_UTR |
| AGTTGTGTACATTTGATCAG+AGG | 0.615429 | 3_1:-78099187 | Msa0377550:five_prime_UTR |
| GCATTGAAGGTCACAACCGA+AGG | 0.616695 | 3_1:+78099967 | None:intergenic |
| GTAGAAAGAACAAGGTCTCA+CGG | 0.616795 | 3_1:-78099471 | Msa0377550:five_prime_UTR |
| ACTTAATGATACAATTAGGG+TGG | 0.617586 | 3_1:+78094533 | Msa0377540:CDS |
| AGCCATGGAATGGACATCAT+GGG | 0.617755 | 3_1:-78094579 | Msa0377550:CDS |
| TCCATCATAGTCCAAAAGCA+AGG | 0.620284 | 3_1:+78095214 | None:intergenic |
| TTTGAGGAACTGCAAAAGTG+GGG | 0.621075 | 3_1:-78099646 | Msa0377550:five_prime_UTR |
| ATACGTGGTTTGGCAGAGGA+GGG | 0.621313 | 3_1:-78100243 | Msa0377550:five_prime_UTR |
| AGTCGTTGTCCCGACTAGGA+AGG | 0.623377 | 3_1:+78099416 | None:intergenic |
| TATACCAAGATGTTTAAGGA+GGG | 0.624255 | 3_1:-78100300 | Msa0377550:five_prime_UTR |
| TGAAATGTGTAAGCGAGGAA+TGG | 0.627635 | 3_1:-78100040 | Msa0377550:five_prime_UTR |
| GGTCGTGAATCAAGAACCAA+AGG | 0.628779 | 3_1:-78098824 | Msa0377550:intron |
| AATAAAGAAGACGCGTGAGG+AGG | 0.631508 | 3_1:+78099071 | None:intergenic |
| AACGTAACAGGCTTTGCGAG+AGG | 0.632868 | 3_1:-78093550 | Msa0377550:intron |
| GGTGAAGGAAATGTGTGAGG+CGG | 0.638687 | 3_1:-78099797 | Msa0377550:five_prime_UTR |
| GTATACCAAGATGTTTAAGG+AGG | 0.639438 | 3_1:-78100301 | Msa0377550:five_prime_UTR |
| GAGGTCTTTGTAAGGAACAG+AGG | 0.646560 | 3_1:-78099168 | Msa0377550:five_prime_UTR |
| GTGACAGGAAAACATTGAAG+AGG | 0.649854 | 3_1:-78098283 | Msa0377550:five_prime_UTR |
| TTGTTTGTGTAGAAAGAACA+AGG | 0.650196 | 3_1:-78099479 | Msa0377550:five_prime_UTR |
| GTATGCTATTGAACATCCCA+AGG | 0.650582 | 3_1:-78098030 | Msa0377550:five_prime_UTR |
| ATATGTGAAATGTGTAAGCG+AGG | 0.651606 | 3_1:-78100045 | Msa0377550:five_prime_UTR |
| GTGCGTGCAAACATTGTGCT+CGG | 0.655549 | 3_1:+78100077 | None:intergenic |
| ATTCCTGCCAATGATTAATG+AGG | 0.655854 | 3_1:-78094368 | Msa0377550:intron |
| GGGAATAAAGAAGACGCGTG+AGG | 0.658875 | 3_1:+78099068 | None:intergenic |
| TTGTACGCTATAATGATACG+TGG | 0.658988 | 3_1:-78100258 | Msa0377550:five_prime_UTR |
| ACCGCTGCAACCTTTCCACA+TGG | 0.659398 | 3_1:-78098052 | Msa0377550:five_prime_UTR |
| TCGTGACTGTGCATTCATGT+TGG | 0.664748 | 3_1:-78095168 | Msa0377550:CDS |
| GATATAGGGAAGCACATGTG+TGG | 0.671853 | 3_1:-78100323 | Msa0377550:five_prime_UTR |
| AAAGGTGAAGGAAATGTGTG+AGG | 0.684045 | 3_1:-78099800 | Msa0377550:five_prime_UTR |
| ACCATGTGGAAAGGTTGCAG+CGG | 0.688571 | 3_1:+78098051 | None:intergenic |
| CTACAGACAAGCAGGTACTG+TGG | 0.688943 | 3_1:-78094510 | Msa0377550:CDS |
| TTGTCTAAGAAGTCATGACA+AGG | 0.699767 | 3_1:-78097487 | Msa0377550:intron |
| GAGATAGAGATTGTCTAACA+GGG | 0.702566 | 3_1:+78094556 | Msa0377540:CDS |
| ATGTTCAATAGCATACCATG+TGG | 0.709497 | 3_1:+78098037 | None:intergenic |
| TAAGCGAGGAATGGTTGCTG+AGG | 0.728955 | 3_1:-78100031 | Msa0377550:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCATTTATCTTTAAAT+TGG | + | chr3_1:78098914-78098933 | None:intergenic | 10.0% |
| !!! | TCTTATTAATGGATTTTTTA+AGG | - | chr3_1:78093491-78093510 | Msa0377550:CDS | 15.0% |
| !!! | ACTCTAGAAAAATATTTATT+CGG | - | chr3_1:78094458-78094477 | Msa0377550:intron | 15.0% |
| !!! | GTTTAAAGTAAAATTCTAAA+AGG | + | chr3_1:78095178-78095197 | None:intergenic | 15.0% |
| !! | TATTGAAAGTAAATTTCATA+TGG | + | chr3_1:78097031-78097050 | None:intergenic | 15.0% |
| !!! | TTTTTATTATTAATGTTACG+CGG | - | chr3_1:78097334-78097353 | Msa0377550:intron | 15.0% |
| !! | TATTGAAAGTAAATTTCATA+TGG | + | chr3_1:78097031-78097050 | None:intergenic | 15.0% |
| !! | AAAAAATCCATTAATAAGAG+AGG | + | chr3_1:78093490-78093509 | Msa0377540:intron | 20.0% |
| !! | AGGCAAAAGAATTATTTAAT+CGG | - | chr3_1:78093832-78093851 | Msa0377550:intron | 20.0% |
| !! | AAAAGAATTATTTAATCGGA+TGG | - | chr3_1:78093836-78093855 | Msa0377550:intron | 20.0% |
| !! | AAAGAATTTATTTCACAAGA+TGG | - | chr3_1:78093941-78093960 | Msa0377550:intron | 20.0% |
| !! | AAGAATTTATTTCACAAGAT+GGG | - | chr3_1:78093942-78093961 | Msa0377550:intron | 20.0% |
| !! | ATATTTATTCGGAGAAAAAT+TGG | - | chr3_1:78094469-78094488 | Msa0377550:intron | 20.0% |
| !! | CATATACAATTCTACTTATT+GGG | - | chr3_1:78094552-78094571 | Msa0377550:CDS | 20.0% |
| !!! | ATTTTTTTACAGTCTTGATA+AGG | - | chr3_1:78094718-78094737 | Msa0377550:intron | 20.0% |
| !!! | TTTTTTTACAGTCTTGATAA+GGG | - | chr3_1:78094719-78094738 | Msa0377550:intron | 20.0% |
| !! | CAAATTCTTCTGAATTTAAA+TGG | + | chr3_1:78094856-78094875 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTTCTTTCCTTTT+TGG | + | chr3_1:78094907-78094926 | None:intergenic | 20.0% |
| !!! | TGTAATTTAATCTTTTCTGA+GGG | + | chr3_1:78094933-78094952 | None:intergenic | 20.0% |
| !! | AAGAAAAAACATATACAGAA+GGG | + | chr3_1:78095055-78095074 | None:intergenic | 20.0% |
| !! | TGAAATTTAACATACACATA+AGG | + | chr3_1:78095086-78095105 | None:intergenic | 20.0% |
| !! | TGCAAAATGAACAAAAATAA+AGG | + | chr3_1:78096063-78096082 | None:intergenic | 20.0% |
| !!! | TTACATCTTTTGATCAAATT+AGG | - | chr3_1:78096103-78096122 | Msa0377550:intron | 20.0% |
| !! | AAGAGAAAAATTGTCAAATT+TGG | + | chr3_1:78096495-78096514 | None:intergenic | 20.0% |
| !! | AGAACTAGAATTAAAACAAA+AGG | - | chr3_1:78096605-78096624 | Msa0377550:intron | 20.0% |
| !!! | TTTTATTATTAATGTTACGC+GGG | - | chr3_1:78097335-78097354 | Msa0377550:intron | 20.0% |
| !! | TTAATGTTTACATTACAAGA+TGG | + | chr3_1:78097445-78097464 | None:intergenic | 20.0% |
| !! | TTCAAAATTAGTAAACTACA+AGG | + | chr3_1:78097566-78097585 | None:intergenic | 20.0% |
| !!! | TTGTAGTTTACTAATTTTGA+AGG | - | chr3_1:78097565-78097584 | Msa0377550:intron | 20.0% |
| !!! | TTACATCTTTTGATCAAATT+AGG | - | chr3_1:78096103-78096122 | Msa0377550:intron | 20.0% |
| !! | ATAGTAATTAGACAGTAAAA+TGG | + | chr3_1:78098727-78098746 | None:intergenic | 20.0% |
| !!! | TGTGATTAAACACTATTTTA+AGG | + | chr3_1:78099065-78099084 | None:intergenic | 20.0% |
| !! | TAGACTTAATGATACAATTA+GGG | + | chr3_1:78099316-78099335 | None:intergenic | 20.0% |
| !!! | TTTGATTTTTTATACAGAGT+TGG | - | chr3_1:78099788-78099807 | Msa0377550:five_prime_UTR | 20.0% |
| !!! | TTGATTTTTTATACAGAGTT+GGG | - | chr3_1:78099789-78099808 | Msa0377550:five_prime_UTR | 20.0% |
| !!! | CATCAGAAAATATTGTTTTT+AGG | - | chr3_1:78100125-78100144 | Msa0377550:five_prime_UTR | 20.0% |
| !! | TATGAACTCAGTTAAAAATT+GGG | + | chr3_1:78100405-78100424 | None:intergenic | 20.0% |
| !!! | TGAGTTCATACATTATATTT+TGG | - | chr3_1:78100415-78100434 | Msa0377550:five_prime_UTR | 20.0% |
| !!! | GAGTTCATACATTATATTTT+GGG | - | chr3_1:78100416-78100435 | Msa0377550:five_prime_UTR | 20.0% |
| !!! | TTAATGGATTTTTTAAGGCT+AGG | - | chr3_1:78093496-78093515 | Msa0377550:CDS | 25.0% |
| !! | AAGTGTTTTATAAACTGAGA+GGG | + | chr3_1:78094339-78094358 | Msa0377540:intron | 25.0% |
| !! | TAAGTGTTTTATAAACTGAG+AGG | + | chr3_1:78094340-78094359 | Msa0377540:intron | 25.0% |
| ! | CCAATAAGTAGAATTGTATA+TGG | + | chr3_1:78094554-78094573 | Msa0377540:CDS | 25.0% |
| ! | CCATATACAATTCTACTTAT+TGG | - | chr3_1:78094551-78094570 | Msa0377550:CDS | 25.0% |
| !!! | TTTTCTTTCCTTTTTGGTAT+TGG | + | chr3_1:78094901-78094920 | None:intergenic | 25.0% |
| !! | GTGTAATTTAATCTTTTCTG+AGG | + | chr3_1:78094934-78094953 | None:intergenic | 25.0% |
| ! | CAAGAAAAAACATATACAGA+AGG | + | chr3_1:78095056-78095075 | None:intergenic | 25.0% |
| ! | AGTTATTGTAGAACAGTATA+AGG | - | chr3_1:78095122-78095141 | Msa0377550:intron | 25.0% |
| !!! | GAATTTTGAAGAGTGATTAT+CGG | - | chr3_1:78095272-78095291 | Msa0377550:intron | 25.0% |
| ! | AAGAAAGAAAGAAACTTTGT+GGG | + | chr3_1:78095310-78095329 | None:intergenic | 25.0% |
| ! | TAAGAAAGAAAGAAACTTTG+TGG | + | chr3_1:78095311-78095330 | None:intergenic | 25.0% |
| ! | TTCTAATGTTTGGAAATGTA+TGG | - | chr3_1:78095361-78095380 | Msa0377550:intron | 25.0% |
| ! | AAAAACATCTTCAAGAATTC+CGG | + | chr3_1:78095846-78095865 | None:intergenic | 25.0% |
| ! | TAACAAATGGATGTTAATCA+TGG | - | chr3_1:78095919-78095938 | Msa0377550:intron | 25.0% |
| ! | ATCGATAAGAGAAAAGAAAA+GGG | + | chr3_1:78096418-78096437 | None:intergenic | 25.0% |
| ! | TTTCTCTTATCGATGATTTA+AGG | - | chr3_1:78096424-78096443 | Msa0377550:intron | 25.0% |
| !! | TTCTCTTATCGATTAATCTT+AGG | - | chr3_1:78096508-78096527 | Msa0377550:intron | 25.0% |
| ! | ACTAGAATTAAAACAAAAGG+CGG | - | chr3_1:78096608-78096627 | Msa0377550:intron | 25.0% |
| !! | ACTTTCTCAAGAATTTTCTA+CGG | + | chr3_1:78097064-78097083 | None:intergenic | 25.0% |
| ! | AATATGATCTCAAAGTTCAT+AGG | - | chr3_1:78097266-78097285 | Msa0377550:intron | 25.0% |
| ! | AATTAAGAATTCACCAGTTT+AGG | + | chr3_1:78097365-78097384 | None:intergenic | 25.0% |
| ! | AATCTTTCTTTACTTTGTCA+GGG | - | chr3_1:78097648-78097667 | Msa0377550:intron | 25.0% |
| ! | CTTTCAATAGCATAAATTAC+CGG | - | chr3_1:78097042-78097061 | Msa0377550:intron | 25.0% |
| ! | AATATGATCTCAAAGTTCAT+AGG | - | chr3_1:78097266-78097285 | Msa0377550:intron | 25.0% |
| ! | ATTTGATCAAAAGATGTAAG+TGG | + | chr3_1:78096102-78096121 | None:intergenic | 25.0% |
| ! | ATTGGTAAGACAAAAGAAAA+AGG | + | chr3_1:78098896-78098915 | None:intergenic | 25.0% |
| !! | GTTCAAGTACATGAATTTTT+AGG | - | chr3_1:78099216-78099235 | Msa0377550:five_prime_UTR | 25.0% |
| !!! | ACATGAATTTTTAGGACTAA+CGG | - | chr3_1:78099224-78099243 | Msa0377550:five_prime_UTR | 25.0% |
| ! | GTAGACTTAATGATACAATT+AGG | + | chr3_1:78099317-78099336 | None:intergenic | 25.0% |
| ! | ATGTACAGATACAGAATTAT+TGG | + | chr3_1:78099647-78099666 | None:intergenic | 25.0% |
| ! | TAACTTAATGTCGATGAAAA+GGG | + | chr3_1:78099750-78099769 | None:intergenic | 25.0% |
| ! | AACTAACTCAGTACATTTAA+AGG | - | chr3_1:78099930-78099949 | Msa0377550:five_prime_UTR | 25.0% |
| ! | TTAAAATACAAGCAAACAAG+TGG | + | chr3_1:78100255-78100274 | None:intergenic | 25.0% |
| ! | GTATGAACTCAGTTAAAAAT+TGG | + | chr3_1:78100406-78100425 | None:intergenic | 25.0% |
| GTGTGGTTAATAAAGAAAGA+TGG | - | chr3_1:78093438-78093457 | Msa0377550:exon | 30.0% | |
| AGCTATTCCTCTCTTATTAA+TGG | - | chr3_1:78093480-78093499 | Msa0377550:CDS | 30.0% | |
| !!! | TTTTTAAGGCTAGGAGATAT+AGG | - | chr3_1:78093505-78093524 | Msa0377550:CDS | 30.0% |
| !!! | TTTTAAGGCTAGGAGATATA+GGG | - | chr3_1:78093506-78093525 | Msa0377550:CDS | 30.0% |
| TATACCAAGATGTTTAAGGA+GGG | - | chr3_1:78093543-78093562 | Msa0377550:CDS | 30.0% | |
| ATTCAAGGTTTATGTGATGT+AGG | - | chr3_1:78093705-78093724 | Msa0377550:intron | 30.0% | |
| CTCAAAAAGATTATAAGCAG+CGG | + | chr3_1:78094183-78094202 | Msa0377540:intron | 30.0% | |
| ACATATGGGACAATTATCAA+AGG | - | chr3_1:78094239-78094258 | Msa0377550:intron | 30.0% | |
| CATATGGGACAATTATCAAA+GGG | - | chr3_1:78094240-78094259 | Msa0377550:intron | 30.0% | |
| TTGTTTGTGTAGAAAGAACA+AGG | - | chr3_1:78094364-78094383 | Msa0377550:intron | 30.0% | |
| TCTTTATTCCCAAGCTTATA+AGG | - | chr3_1:78094787-78094806 | Msa0377550:intron | 30.0% | |
| ! | CTTTTACACCAATACCAAAA+AGG | - | chr3_1:78094890-78094909 | Msa0377550:intron | 30.0% |
| GATGAAAGAGTTTCTTTATG+TGG | - | chr3_1:78094965-78094984 | Msa0377550:intron | 30.0% | |
| ACATATACAGAAGGGATAAA+GGG | + | chr3_1:78095047-78095066 | None:intergenic | 30.0% | |
| AACATATACAGAAGGGATAA+AGG | + | chr3_1:78095048-78095067 | None:intergenic | 30.0% | |
| GTTATAGACATGTGATTTCT+TGG | + | chr3_1:78095200-78095219 | None:intergenic | 30.0% | |
| TCACATGTCTATAACTACTA+TGG | - | chr3_1:78095205-78095224 | Msa0377550:CDS | 30.0% | |
| ATTATGGAGAAATTACCGTT+TGG | - | chr3_1:78095399-78095418 | Msa0377550:intron | 30.0% | |
| TTATGGAGAAATTACCGTTT+GGG | - | chr3_1:78095400-78095419 | Msa0377550:intron | 30.0% | |
| ! | CAATATTTTCAGAAGCTCAA+CGG | - | chr3_1:78095512-78095531 | Msa0377550:intron | 30.0% |
| ! | TTTTTATCGACAAAAGAGCA+TGG | - | chr3_1:78095587-78095606 | Msa0377550:intron | 30.0% |
| TGATTTGAATTCATGTCCAT+AGG | + | chr3_1:78095699-78095718 | None:intergenic | 30.0% | |
| !!! | CTTGAAGATGTTTTTTCTTG+TGG | - | chr3_1:78095851-78095870 | Msa0377550:intron | 30.0% |
| !!! | AGATGTTTTTTCTTGTGGTT+TGG | - | chr3_1:78095856-78095875 | Msa0377550:intron | 30.0% |
| !! | CATCCATTTGTTATATTCTC+CGG | + | chr3_1:78095912-78095931 | None:intergenic | 30.0% |
| CAGGATACTAATTGAAATAG+AGG | + | chr3_1:78095996-78096015 | None:intergenic | 30.0% | |
| TCAAAAGATGTAAGTGCTTA+TGG | + | chr3_1:78096096-78096115 | None:intergenic | 30.0% | |
| ! | CAAAATAATTGCACTGCTTT+TGG | - | chr3_1:78096140-78096159 | Msa0377550:intron | 30.0% |
| TTCCTACAATTATTCTGATC+TGG | - | chr3_1:78096271-78096290 | Msa0377550:intron | 30.0% | |
| TACCAGATCAGAATAATTGT+AGG | + | chr3_1:78096276-78096295 | None:intergenic | 30.0% | |
| ACAATTATTCTGATCTGGTA+AGG | - | chr3_1:78096276-78096295 | Msa0377550:intron | 30.0% | |
| CTTAGACAAGTTATTGTTGT+TGG | + | chr3_1:78096345-78096364 | None:intergenic | 30.0% | |
| CATCGATAAGAGAAAAGAAA+AGG | + | chr3_1:78096419-78096438 | None:intergenic | 30.0% | |
| CACAAAAGTTTGTCTGAATT+TGG | + | chr3_1:78096472-78096491 | None:intergenic | 30.0% | |
| !!! | ATGTTTTGATACATCAGTAG+AGG | - | chr3_1:78096560-78096579 | Msa0377550:intron | 30.0% |
| CTAGAATTAAAACAAAAGGC+GGG | - | chr3_1:78096609-78096628 | Msa0377550:intron | 30.0% | |
| ATTGAACCTATGGTAACAAT+AGG | - | chr3_1:78096742-78096761 | Msa0377550:intron | 30.0% | |
| GAAAGATTCTTCAACGAAAT+AGG | + | chr3_1:78097636-78097655 | None:intergenic | 30.0% | |
| GAATCTTTCTTTACTTTGTC+AGG | - | chr3_1:78097647-78097666 | Msa0377550:intron | 30.0% | |
| ATCTTTCTTTACTTTGTCAG+GGG | - | chr3_1:78097649-78097668 | Msa0377550:intron | 30.0% | |
| !! | AGTGAGTTTGTTAATGAGTA+AGG | - | chr3_1:78097825-78097844 | Msa0377550:intron | 30.0% |
| ! | TAGTATTCAAGCTTTGTAGA+AGG | - | chr3_1:78098032-78098051 | Msa0377550:five_prime_UTR | 30.0% |
| ! | ACTTTCTCAAGAATTTTCTC+CGG | + | chr3_1:78098197-78098216 | None:intergenic | 30.0% |
| TTGATTCTTTATCGTATGCT+TGG | + | chr3_1:78098436-78098455 | None:intergenic | 30.0% | |
| ! | CAAAATAATTGCCTTGCTTT+TGG | - | chr3_1:78098530-78098549 | Msa0377550:intron | 30.0% |
| ! | GGACATCTTTTGATCAAATT+AGG | - | chr3_1:78098581-78098600 | Msa0377550:intron | 30.0% |
| ! | CAAAATAATTGCCTTGCTTT+TGG | - | chr3_1:78098530-78098549 | Msa0377550:intron | 30.0% |
| GTAATTAGACAGTAAAATGG+AGG | + | chr3_1:78098724-78098743 | None:intergenic | 30.0% | |
| CTTCAACAAGTTATTGTTGT+TGG | + | chr3_1:78098823-78098842 | None:intergenic | 30.0% | |
| CACGAAAGTTTGTCTAAATT+TGG | + | chr3_1:78098946-78098965 | None:intergenic | 30.0% | |
| CGTAAACCACTTGAAAAAAT+TGG | + | chr3_1:78098969-78098988 | None:intergenic | 30.0% | |
| ! | TGTGGTTAACTCTAATTTTC+AGG | - | chr3_1:78099013-78099032 | Msa0377550:five_prime_UTR | 30.0% |
| !! | ATTATAACTAGCTTTCCTAC+TGG | - | chr3_1:78099194-78099213 | Msa0377550:five_prime_UTR | 30.0% |
| CTTAATGATACAATTAGGGT+GGG | + | chr3_1:78099312-78099331 | None:intergenic | 30.0% | |
| ACTTAATGATACAATTAGGG+TGG | + | chr3_1:78099313-78099332 | None:intergenic | 30.0% | |
| TCTCTTATGATCCAATTACA+GGG | - | chr3_1:78099419-78099438 | Msa0377550:five_prime_UTR | 30.0% | |
| GAGTGTACATAAGACAATAA+AGG | - | chr3_1:78099607-78099626 | Msa0377550:five_prime_UTR | 30.0% | |
| GTAACTTAATGTCGATGAAA+AGG | + | chr3_1:78099751-78099770 | None:intergenic | 30.0% | |
| !! | GTTGCAAGGTACTATTTTAA+GGG | - | chr3_1:78099875-78099894 | Msa0377550:five_prime_UTR | 30.0% |
| ACTTTATTACTCGCTTCATT+AGG | - | chr3_1:78099901-78099920 | Msa0377550:five_prime_UTR | 30.0% | |
| GAAACCATATACTACAGAAA+CGG | + | chr3_1:78100061-78100080 | None:intergenic | 30.0% | |
| !! | GATGGATTAAGATGCATTTA+AGG | - | chr3_1:78100195-78100214 | Msa0377550:five_prime_UTR | 30.0% |
| TATATTGCATTGCTTTCCTT+TGG | + | chr3_1:78100354-78100373 | None:intergenic | 30.0% | |
| !!! | TCTTAATGGGTTTTGCAAGA+CGG | - | chr3_1:78093389-78093408 | Msa0377550:three_prime_UTR | 35.0% |
| GTGGTATACCAAGATGTTTA+AGG | - | chr3_1:78093539-78093558 | Msa0377550:CDS | 35.0% | |
| GTATACCAAGATGTTTAAGG+AGG | - | chr3_1:78093542-78093561 | Msa0377550:CDS | 35.0% | |
| ATACCAAGATGTTTAAGGAG+GGG | - | chr3_1:78093544-78093563 | Msa0377550:intron | 35.0% | |
| ATAGCGTACAAAACAACATC+AGG | + | chr3_1:78093576-78093595 | Msa0377540:intron | 35.0% | |
| TTGTACGCTATAATGATACG+TGG | - | chr3_1:78093585-78093604 | Msa0377550:intron | 35.0% | |
| TGCTACAATGCTGTAATTCA+AGG | - | chr3_1:78093690-78093709 | Msa0377550:intron | 35.0% | |
| ATATGTGAAATGTGTAAGCG+AGG | - | chr3_1:78093798-78093817 | Msa0377550:intron | 35.0% | |
| ACCTTCAATGCGCTTATAAA+TGG | - | chr3_1:78093888-78093907 | Msa0377550:intron | 35.0% | |
| TCCATTTATAAGCGCATTGA+AGG | + | chr3_1:78093892-78093911 | Msa0377540:intron | 35.0% | |
| GTGCAAAGCTAAAAATCTTG+AGG | - | chr3_1:78093914-78093933 | Msa0377550:intron | 35.0% | |
| ! | ACATTTCCTTCACCTTTTTC+TGG | + | chr3_1:78094040-78094059 | Msa0377540:intron | 35.0% |
| AAGTTAATCACTGATCATGC+TGG | - | chr3_1:78094089-78094108 | Msa0377550:intron | 35.0% | |
| ! | TCTAATCAATGCCTTTTGCT+TGG | - | chr3_1:78094145-78094164 | Msa0377550:intron | 35.0% |
| ! | CGCTGCTTATAATCTTTTTG+AGG | - | chr3_1:78094181-78094200 | Msa0377550:intron | 35.0% |
| !! | TTTTTGAGGAACTGCAAAAG+TGG | - | chr3_1:78094195-78094214 | Msa0377550:intron | 35.0% |
| !! | TTTTGAGGAACTGCAAAAGT+GGG | - | chr3_1:78094196-78094215 | Msa0377550:intron | 35.0% |
| TGTCCCATATGTAACACTAT+CGG | + | chr3_1:78094231-78094250 | Msa0377540:intron | 35.0% | |
| CATACGCTGAAAAACCTTAA+AGG | + | chr3_1:78094294-78094313 | Msa0377540:intron | 35.0% | |
| ! | GTTTTATAAACTGAGAGGGT+AGG | + | chr3_1:78094335-78094354 | Msa0377540:intron | 35.0% |
| AAATTGGAACAAGTGATTCG+AGG | - | chr3_1:78094485-78094504 | Msa0377550:intron | 35.0% | |
| TTTACTTGAACTGGACTTCA+AGG | - | chr3_1:78094508-78094527 | Msa0377550:CDS | 35.0% | |
| TGGAGCTAACTTAAAATCTC+TGG | + | chr3_1:78094534-78094553 | Msa0377540:CDS | 35.0% | |
| AGTTGTGTACATTTGATCAG+AGG | - | chr3_1:78094656-78094675 | Msa0377550:intron | 35.0% | |
| TTTGATCAGAGGTCTTTGTA+AGG | - | chr3_1:78094667-78094686 | Msa0377550:intron | 35.0% | |
| AGGAGGTGATTACAAATCAT+TGG | + | chr3_1:78094758-78094777 | None:intergenic | 35.0% | |
| TGTTGATCTTATTGGTAGGA+TGG | - | chr3_1:78094817-78094836 | Msa0377550:intron | 35.0% | |
| ! | ATTGGTAGGATGGAATCTTT+TGG | - | chr3_1:78094827-78094846 | Msa0377550:intron | 35.0% |
| AATATCCCCAGTTACGAAAA+TGG | - | chr3_1:78094998-78095017 | Msa0377550:intron | 35.0% | |
| CAGTATAAGGATCGATTAAG+AGG | - | chr3_1:78095135-78095154 | Msa0377550:intron | 35.0% | |
| ! | ATTCTAAAAGGAAGCATGCA+AGG | + | chr3_1:78095166-78095185 | None:intergenic | 35.0% |
| TTCTTTCTTAAGCGTGCATT+CGG | - | chr3_1:78095321-78095340 | Msa0377550:intron | 35.0% | |
| TTTGCATGCGTTCTAATGTT+TGG | - | chr3_1:78095351-78095370 | Msa0377550:intron | 35.0% | |
| ! | AAATGTATGGACACGTCTTT+TGG | - | chr3_1:78095374-78095393 | Msa0377550:intron | 35.0% |
| ! | AGTGCATCTTTTCTTTCCAT+TGG | + | chr3_1:78095435-78095454 | None:intergenic | 35.0% |
| ATGGGAATAAGGCAACAAAT+TGG | + | chr3_1:78095771-78095790 | None:intergenic | 35.0% | |
| ATGTTCAATAGCATACCATG+TGG | + | chr3_1:78095809-78095828 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCTTGTGGTTTGGT+TGG | - | chr3_1:78095860-78095879 | Msa0377550:intron | 35.0% |
| TGGATCTGAAGATGATTTCA+TGG | + | chr3_1:78095889-78095908 | None:intergenic | 35.0% | |
| AAACTGATCCTTACTCTAAC+TGG | - | chr3_1:78095956-78095975 | Msa0377550:intron | 35.0% | |
| CATCTTAAAACTGCAGAACT+AGG | + | chr3_1:78096022-78096041 | None:intergenic | 35.0% | |
| !!! | CTAGTTCTGCAGTTTTAAGA+TGG | - | chr3_1:78096020-78096039 | Msa0377550:intron | 35.0% |
| CAAATTAGGAACTTCGCAAA+AGG | - | chr3_1:78096117-78096136 | Msa0377550:intron | 35.0% | |
| !!! | TGGAACTTTTTCACCAATTG+TGG | - | chr3_1:78096170-78096189 | Msa0377550:intron | 35.0% |
| CAGTCAAGATTATCCACAAT+TGG | + | chr3_1:78096186-78096205 | None:intergenic | 35.0% | |
| TTGTCTAAGAAGTCATGACA+AGG | - | chr3_1:78096356-78096375 | Msa0377550:intron | 35.0% | |
| ATTGGAAGGAACTTGAGATT+TGG | - | chr3_1:78096650-78096669 | Msa0377550:intron | 35.0% | |
| TGAGATTTGGAAACTCATAG+AGG | - | chr3_1:78096663-78096682 | Msa0377550:intron | 35.0% | |
| ! | GAAACTGTTGATTGAACCTA+TGG | - | chr3_1:78096732-78096751 | Msa0377550:intron | 35.0% |
| TTGCATCCTATTGTTACCAT+AGG | + | chr3_1:78096751-78096770 | None:intergenic | 35.0% | |
| !!! | GTCAGGTCAGTTTTAAGTTT+GGG | + | chr3_1:78096778-78096797 | None:intergenic | 35.0% |
| !!! | TGTCAGGTCAGTTTTAAGTT+TGG | + | chr3_1:78096779-78096798 | None:intergenic | 35.0% |
| ! | TTTTGGCAATATTCAGTGTC+AGG | + | chr3_1:78096795-78096814 | None:intergenic | 35.0% |
| AATTTCATATGGTTCAGCTG+TGG | + | chr3_1:78097020-78097039 | None:intergenic | 35.0% | |
| TTGATTCTTAATCGTGTGCT+TGG | + | chr3_1:78097303-78097322 | None:intergenic | 35.0% | |
| AATTTCATATGGTTCAGCTG+TGG | + | chr3_1:78097020-78097039 | None:intergenic | 35.0% | |
| CAACACATTGATCTGACTTT+AGG | + | chr3_1:78098220-78098239 | None:intergenic | 35.0% | |
| ! | AGATCAATGTGTTGTTGTGA+AGG | - | chr3_1:78098226-78098245 | Msa0377550:five_prime_UTR | 35.0% |
| !! | GTTGATACACTTGCTTTTGA+AGG | + | chr3_1:78098262-78098281 | None:intergenic | 35.0% |
| TCAAATTAGGAACTTCGCAA+AGG | - | chr3_1:78096116-78096135 | Msa0377550:intron | 35.0% | |
| CAAATTAGGAACTTCGCAAA+GGG | - | chr3_1:78096117-78096136 | Msa0377550:intron | 35.0% | |
| TTCATCATACTCCAAAAGCA+AGG | + | chr3_1:78098544-78098563 | None:intergenic | 35.0% | |
| TGAAACTTCTTCACCAATTG+TGG | - | chr3_1:78098560-78098579 | Msa0377550:intron | 35.0% | |
| GATCAAAAGATGTCCACAAT+TGG | + | chr3_1:78098576-78098595 | None:intergenic | 35.0% | |
| CAAATTAGGAACTTCGCAAA+AGG | - | chr3_1:78096117-78096136 | Msa0377550:intron | 35.0% | |
| CAGTCACGATTATACACAAT+TGG | + | chr3_1:78098664-78098683 | None:intergenic | 35.0% | |
| TACTAGATCAGAATCAGTGT+AGG | + | chr3_1:78098754-78098773 | None:intergenic | 35.0% | |
| !! | ACACTGATTCTGATCTAGTA+AGG | - | chr3_1:78098754-78098773 | Msa0377550:intron | 35.0% |
| TTGTTGAAGAAATCGTGACA+AGG | - | chr3_1:78098834-78098853 | Msa0377550:five_prime_UTR | 35.0% | |
| !!! | TTCGTGCCAATTTTTTCAAG+TGG | - | chr3_1:78098960-78098979 | Msa0377550:five_prime_UTR | 35.0% |
| CTGTTCATTTACCACGAAAT+TGG | - | chr3_1:78098989-78099008 | Msa0377550:five_prime_UTR | 35.0% | |
| ATTTACCACGAAATTGGATG+TGG | - | chr3_1:78098995-78099014 | Msa0377550:five_prime_UTR | 35.0% | |
| ATCAAAAACAACAACGAACG+AGG | + | chr3_1:78099176-78099195 | None:intergenic | 35.0% | |
| ATTCATGTACTTGAACCAGT+AGG | + | chr3_1:78099212-78099231 | None:intergenic | 35.0% | |
| GAGATAGAGATTGTCTAACA+GGG | + | chr3_1:78099290-78099309 | None:intergenic | 35.0% | |
| GTCTACATCTCATCCAATTA+TGG | - | chr3_1:78099363-78099382 | Msa0377550:five_prime_UTR | 35.0% | |
| CTCGAACAGATATCCATAAT+TGG | + | chr3_1:78099379-78099398 | None:intergenic | 35.0% | |
| CTCTCTTATGATCCAATTAC+AGG | - | chr3_1:78099418-78099437 | Msa0377550:five_prime_UTR | 35.0% | |
| CTCTTATGATCCAATTACAG+GGG | - | chr3_1:78099420-78099439 | Msa0377550:five_prime_UTR | 35.0% | |
| TAATCTTCTTCCCCTGTAAT+TGG | + | chr3_1:78099433-78099452 | None:intergenic | 35.0% | |
| ATTCCTGCCAATGATTAATG+AGG | - | chr3_1:78099475-78099494 | Msa0377550:five_prime_UTR | 35.0% | |
| GTATCCACCTCATTAATCAT+TGG | + | chr3_1:78099485-78099504 | None:intergenic | 35.0% | |
| ATACCTTCTCATCTACATTG+AGG | + | chr3_1:78099672-78099691 | None:intergenic | 35.0% | |
| ! | CAATGTAGATGAGAAGGTAT+AGG | - | chr3_1:78099672-78099691 | Msa0377550:five_prime_UTR | 35.0% |
| TATACAGAGTTGGGATTTGA+TGG | - | chr3_1:78099798-78099817 | Msa0377550:five_prime_UTR | 35.0% | |
| ATACAGAGTTGGGATTTGAT+GGG | - | chr3_1:78099799-78099818 | Msa0377550:five_prime_UTR | 35.0% | |
| !! | GGTTGCAAGGTACTATTTTA+AGG | - | chr3_1:78099874-78099893 | Msa0377550:five_prime_UTR | 35.0% |
| ! | TTTCTTTTACTCGAGTCACT+TGG | - | chr3_1:78100023-78100042 | Msa0377550:five_prime_UTR | 35.0% |
| ! | TTTGCCGTTTCTGTAGTATA+TGG | - | chr3_1:78100054-78100073 | Msa0377550:five_prime_UTR | 35.0% |
| CCTATATTATCAGCGATGAT+CGG | - | chr3_1:78100173-78100192 | Msa0377550:five_prime_UTR | 35.0% | |
| GATATGAGATGAAACGTAAC+AGG | - | chr3_1:78100281-78100300 | Msa0377550:five_prime_UTR | 35.0% | |
| TTTAGTGTCTTCAGAACCAA+AGG | - | chr3_1:78100335-78100354 | Msa0377550:five_prime_UTR | 35.0% | |
| !!! | CTTAATGGGTTTTGCAAGAC+GGG | - | chr3_1:78093390-78093409 | Msa0377550:three_prime_UTR | 40.0% |
| !!! | TTAATGGGTTTTGCAAGACG+GGG | - | chr3_1:78093391-78093410 | Msa0377550:three_prime_UTR | 40.0% |
| !!! | AGGAAGCACTTTCTTTTGTG+TGG | - | chr3_1:78093421-78093440 | Msa0377550:three_prime_UTR | 40.0% |
| AATCCCCTCCTTAAACATCT+TGG | + | chr3_1:78093550-78093569 | Msa0377540:intron | 40.0% | |
| CGCTATAATGATACGTGGTT+TGG | - | chr3_1:78093590-78093609 | Msa0377550:intron | 40.0% | |
| TGAAGCTGGTAAGATGTTAG+AGG | - | chr3_1:78093632-78093651 | Msa0377550:intron | 40.0% | |
| TTAGAGGAGATGACTCAGAT+AGG | - | chr3_1:78093648-78093667 | Msa0377550:intron | 40.0% | |
| GCATTGTAGCAATAAGCATC+AGG | + | chr3_1:78093681-78093700 | Msa0377540:intron | 40.0% | |
| TGAAATGTGTAAGCGAGGAA+TGG | - | chr3_1:78093803-78093822 | Msa0377550:intron | 40.0% | |
| TTTAATCGGATGGAGAAGCT+TGG | - | chr3_1:78093846-78093865 | Msa0377550:intron | 40.0% | |
| TTATTTCACAAGATGGGCGT+CGG | - | chr3_1:78093948-78093967 | Msa0377550:intron | 40.0% | |
| TTTCGCATCAGTCTTTCTCA+GGG | - | chr3_1:78093984-78094003 | Msa0377550:CDS | 40.0% | |
| TAGTCTCCAGAAAAAGGTGA+AGG | - | chr3_1:78094031-78094050 | Msa0377550:CDS | 40.0% | |
| AAAGGTGAAGGAAATGTGTG+AGG | - | chr3_1:78094043-78094062 | Msa0377550:intron | 40.0% | |
| AACGTTACGATCCAAGCAAA+AGG | + | chr3_1:78094159-78094178 | Msa0377540:intron | 40.0% | |
| TTTGAGGAACTGCAAAAGTG+GGG | - | chr3_1:78094197-78094216 | Msa0377550:intron | 40.0% | |
| TCACCCGATAGTGTTACATA+TGG | - | chr3_1:78094224-78094243 | Msa0377550:intron | 40.0% | |
| CACCCGATAGTGTTACATAT+GGG | - | chr3_1:78094225-78094244 | Msa0377550:intron | 40.0% | |
| GTCCCATATGTAACACTATC+GGG | + | chr3_1:78094230-78094249 | Msa0377540:intron | 40.0% | |
| CAGAGAAGATGATGCCTTTA+AGG | - | chr3_1:78094277-78094296 | Msa0377550:intron | 40.0% | |
| GTAGAAAGAACAAGGTCTCA+CGG | - | chr3_1:78094372-78094391 | Msa0377550:CDS | 40.0% | |
| TAGAAAGAACAAGGTCTCAC+GGG | - | chr3_1:78094373-78094392 | Msa0377550:CDS | 40.0% | |
| ACGGGCATTCAGTCTTTATT+TGG | - | chr3_1:78094391-78094410 | Msa0377550:CDS | 40.0% | |
| ATTTGAAGAGCCTTCCTAGT+CGG | - | chr3_1:78094417-78094436 | Msa0377550:intron | 40.0% | |
| GATTCGAGGTTTACTTGAAC+TGG | - | chr3_1:78094499-78094518 | Msa0377550:intron | 40.0% | |
| TCTACTTATTGGGTTCTGTC+AGG | - | chr3_1:78094562-78094581 | Msa0377550:CDS | 40.0% | |
| ATTCCCAAGCTTATAAGGAG+TGG | - | chr3_1:78094792-78094811 | Msa0377550:intron | 40.0% | |
| TTCCCAAGCTTATAAGGAGT+GGG | - | chr3_1:78094793-78094812 | Msa0377550:intron | 40.0% | |
| ! | TCACGACCATTTTCGTAACT+GGG | + | chr3_1:78095007-78095026 | None:intergenic | 40.0% |
| ! | TTCACGACCATTTTCGTAAC+TGG | + | chr3_1:78095008-78095027 | None:intergenic | 40.0% |
| !! | GACACGTCTTTTGGTGATTA+TGG | - | chr3_1:78095383-78095402 | Msa0377550:intron | 40.0% |
| ! | TGTTTTCCTGTCACTACTCT+TGG | + | chr3_1:78095554-78095573 | None:intergenic | 40.0% |
| GTGACAGGAAAACATTGAAG+AGG | - | chr3_1:78095560-78095579 | Msa0377550:intron | 40.0% | |
| ACAGGAAAACATTGAAGAGG+TGG | - | chr3_1:78095563-78095582 | Msa0377550:intron | 40.0% | |
| TGCTAAAAACCTGGATCCTA+TGG | - | chr3_1:78095680-78095699 | Msa0377550:intron | 40.0% | |
| AATTCATGTCCATAGGATCC+AGG | + | chr3_1:78095692-78095711 | None:intergenic | 40.0% | |
| CTGCTCTGATAACAAACTCA+AGG | - | chr3_1:78095738-78095757 | Msa0377550:intron | 40.0% | |
| CAATAGCATACCATGTGGAA+AGG | + | chr3_1:78095804-78095823 | None:intergenic | 40.0% | |
| GTATGCTATTGAACATCCCA+AGG | - | chr3_1:78095813-78095832 | Msa0377550:intron | 40.0% | |
| GAAATCATCTTCAGATCCAC+CGG | - | chr3_1:78095890-78095909 | Msa0377550:intron | 40.0% | |
| !! | CCATTTGTTATATTCTCCGG+TGG | + | chr3_1:78095909-78095928 | None:intergenic | 40.0% |
| CCACCGGAGAATATAACAAA+TGG | - | chr3_1:78095906-78095925 | Msa0377550:intron | 40.0% | |
| AAACTGCAGAACTAGGATAC+AGG | + | chr3_1:78096015-78096034 | None:intergenic | 40.0% | |
| TCTTGACTGTGCTTTCATGT+CGG | - | chr3_1:78096197-78096216 | Msa0377550:intron | 40.0% | |
| ! | GATGTGTGCTGCTGTTAAAA+AGG | - | chr3_1:78096305-78096324 | Msa0377550:intron | 40.0% |
| !! | AATCTTAGGTGCCGATTGAA+TGG | - | chr3_1:78096522-78096541 | Msa0377550:intron | 40.0% |
| CTTGTACTGCTCCATTCAAT+CGG | + | chr3_1:78096536-78096555 | None:intergenic | 40.0% | |
| ATTAAAACAAAAGGCGGGAC+TGG | - | chr3_1:78096614-78096633 | Msa0377550:intron | 40.0% | |
| !! | GGTTATCCTAATTCAGGTTG+TGG | + | chr3_1:78096833-78096852 | None:intergenic | 40.0% |
| ! | GGTTCTGGTTATCCTAATTC+AGG | + | chr3_1:78096839-78096858 | None:intergenic | 40.0% |
| TTAGGATAACCAGAACCTGA+AGG | - | chr3_1:78096842-78096861 | Msa0377550:intron | 40.0% | |
| TCTTCTGAATCTACTCCTTC+AGG | + | chr3_1:78096860-78096879 | None:intergenic | 40.0% | |
| TGAAGGAGTAGATTCAGAAG+AGG | - | chr3_1:78096859-78096878 | Msa0377550:intron | 40.0% | |
| GAAGGAGTAGATTCAGAAGA+GGG | - | chr3_1:78096860-78096879 | Msa0377550:intron | 40.0% | |
| CAGCACATTGATCTGACTTT+AGG | + | chr3_1:78097087-78097106 | None:intergenic | 40.0% | |
| ! | AGATCAATGTGCTGTTGTGA+AGG | - | chr3_1:78097093-78097112 | Msa0377550:intron | 40.0% |
| ! | CTTCACTCAGCTTTTCTTGA+AGG | + | chr3_1:78097192-78097211 | None:intergenic | 40.0% |
| CAAGTGGAAACAGTACAACA+TGG | + | chr3_1:78097702-78097721 | None:intergenic | 40.0% | |
| CATGTTGTACTGTTTCCACT+TGG | - | chr3_1:78097700-78097719 | Msa0377550:intron | 40.0% | |
| TTGTACTGTTTCCACTTGGT+GGG | - | chr3_1:78097704-78097723 | Msa0377550:intron | 40.0% | |
| ! | ACACCTTCAATCAGAAGTGT+CGG | - | chr3_1:78097939-78097958 | Msa0377550:exon | 40.0% |
| ! | CTTCACTCAGCTTTTCTTGA+AGG | + | chr3_1:78097192-78097211 | None:intergenic | 40.0% |
| ! | GATGTAAGTGGTTTTTCGCA+TGG | + | chr3_1:78098480-78098499 | None:intergenic | 40.0% |
| TCCATCATAGTCCAAAAGCA+AGG | + | chr3_1:78096154-78096173 | None:intergenic | 40.0% | |
| GTTAACCACATCCAATTTCG+TGG | + | chr3_1:78099003-78099022 | None:intergenic | 40.0% | |
| CTAACGGAACTCTATTACAC+TGG | - | chr3_1:78099240-78099259 | Msa0377550:five_prime_UTR | 40.0% | |
| GGAGATAGAGATTGTCTAAC+AGG | + | chr3_1:78099291-78099310 | None:intergenic | 40.0% | |
| CATTAAGTCTACAGACAAGC+AGG | - | chr3_1:78099325-78099344 | Msa0377550:five_prime_UTR | 40.0% | |
| TGCACAAACATGCGTTAATC+AGG | + | chr3_1:78099558-78099577 | None:intergenic | 40.0% | |
| TGATTAACGCATGTTTGTGC+AGG | - | chr3_1:78099557-78099576 | Msa0377550:five_prime_UTR | 40.0% | |
| TTGCCTCAATGTAGATGAGA+AGG | - | chr3_1:78099666-78099685 | Msa0377550:five_prime_UTR | 40.0% | |
| TACAGAGTTGGGATTTGATG+GGG | - | chr3_1:78099800-78099819 | Msa0377550:five_prime_UTR | 40.0% | |
| TCGAGTTAACGATGTTCTTC+AGG | - | chr3_1:78099825-78099844 | Msa0377550:five_prime_UTR | 40.0% | |
| CGAGTTAACGATGTTCTTCA+GGG | - | chr3_1:78099826-78099845 | Msa0377550:five_prime_UTR | 40.0% | |
| ! | AAGGTTGTTACCTCTTTTGC+AGG | - | chr3_1:78099949-78099968 | Msa0377550:five_prime_UTR | 40.0% |
| !! | ACCTCTTTTGCAGGTTTTAG+AGG | - | chr3_1:78099958-78099977 | Msa0377550:five_prime_UTR | 40.0% |
| !! | ACCTCTAAAACCTGCAAAAG+AGG | + | chr3_1:78099962-78099981 | None:intergenic | 40.0% |
| ACCTGTGATTAACTGGGATA+AGG | - | chr3_1:78099985-78100004 | Msa0377550:five_prime_UTR | 40.0% | |
| CCTGTGATTAACTGGGATAA+GGG | - | chr3_1:78099986-78100005 | Msa0377550:five_prime_UTR | 40.0% | |
| CCGATCATCGCTGATAATAT+AGG | + | chr3_1:78100176-78100195 | None:intergenic | 40.0% | |
| TATTATCAGCGATGATCGGA+TGG | - | chr3_1:78100177-78100196 | Msa0377550:five_prime_UTR | 40.0% | |
| !! | GTAATTTCTAGCTTGCTGTG+AGG | - | chr3_1:78100217-78100236 | Msa0377550:five_prime_UTR | 40.0% |
| GAGAGGGAATTAAAGGCTAT+GGG | - | chr3_1:78100310-78100329 | Msa0377550:five_prime_UTR | 40.0% | |
| CTCTTGTCATGATTCGTTAG+AGG | - | chr3_1:78100374-78100393 | Msa0377550:five_prime_UTR | 40.0% | |
| ! | GATATAGGGAAGCACATGTG+TGG | - | chr3_1:78093520-78093539 | Msa0377550:CDS | 45.0% |
| ! | AATGATACGTGGTTTGGCAG+AGG | - | chr3_1:78093596-78093615 | Msa0377550:intron | 45.0% |
| GAAGCTTGGATGTGAACCTT+CGG | - | chr3_1:78093860-78093879 | Msa0377550:intron | 45.0% | |
| TATTTCACAAGATGGGCGTC+GGG | - | chr3_1:78093949-78093968 | Msa0377550:intron | 45.0% | |
| GTTTCGCATCAGTCTTTCTC+AGG | - | chr3_1:78093983-78094002 | Msa0377550:CDS | 45.0% | |
| ATCAGTCTTTCTCAGGGTTC+TGG | - | chr3_1:78093990-78094009 | Msa0377550:CDS | 45.0% | |
| ! | TGGTGCTAGTCTCCAGAAAA+AGG | - | chr3_1:78094025-78094044 | Msa0377550:CDS | 45.0% |
| ! | TGAGGCGGGACAAATTTTGA+AGG | - | chr3_1:78094061-78094080 | Msa0377550:intron | 45.0% |
| TTTCAGCGTATGCAGAAGAC+TGG | - | chr3_1:78094302-78094321 | Msa0377550:intron | 45.0% | |
| TTTGAAGAGCCTTCCTAGTC+GGG | - | chr3_1:78094418-78094437 | Msa0377550:intron | 45.0% | |
| GAGGTCTTTGTAAGGAACAG+AGG | - | chr3_1:78094675-78094694 | Msa0377550:intron | 45.0% | |
| AATAAAGAAGACGCGTGAGG+AGG | + | chr3_1:78094775-78094794 | None:intergenic | 45.0% | |
| AGCCCACTCCTTATAAGCTT+GGG | + | chr3_1:78094798-78094817 | None:intergenic | 45.0% | |
| !! | GAGTGGGCTGTTGATCTTAT+TGG | - | chr3_1:78094809-78094828 | Msa0377550:intron | 45.0% |
| GGGCTGTTGATCTTATTGGT+AGG | - | chr3_1:78094813-78094832 | Msa0377550:intron | 45.0% | |
| ! | CACGACCATTTTCGTAACTG+GGG | + | chr3_1:78095006-78095025 | None:intergenic | 45.0% |
| GGTCGTGAATCAAGAACCAA+AGG | - | chr3_1:78095019-78095038 | Msa0377550:intron | 45.0% | |
| ATTGGAGCAGAAAGCCCAAA+CGG | + | chr3_1:78095417-78095436 | None:intergenic | 45.0% | |
| !! | AATTGTTTCTGCGCGTGTGT+TGG | - | chr3_1:78095648-78095667 | Msa0377550:intron | 45.0% |
| !! | ATTGTTTCTGCGCGTGTGTT+GGG | - | chr3_1:78095649-78095668 | Msa0377550:intron | 45.0% |
| CAGAGCAGTATACGTGAGAA+CGG | + | chr3_1:78095726-78095745 | None:intergenic | 45.0% | |
| AACATCCCAAGGAAGAAGAC+CGG | - | chr3_1:78095824-78095843 | Msa0377550:intron | 45.0% | |
| GAATTCCGGTCTTCTTCCTT+GGG | + | chr3_1:78095832-78095851 | None:intergenic | 45.0% | |
| AGAATTCCGGTCTTCTTCCT+TGG | + | chr3_1:78095833-78095852 | None:intergenic | 45.0% | |
| TGATCCTTACTCTAACTGGC+TGG | - | chr3_1:78095960-78095979 | Msa0377550:intron | 45.0% | |
| GATACCAGCCAGTTAGAGTA+AGG | + | chr3_1:78095967-78095986 | None:intergenic | 45.0% | |
| !! | GCACTGCTTTTGGACTATGA+TGG | - | chr3_1:78096150-78096169 | Msa0377550:intron | 45.0% |
| !! | TCTAGTTCTAGTCCTAGCAC+TGG | + | chr3_1:78096594-78096613 | None:intergenic | 45.0% |
| ! | GAATCTACTCCTTCAGGTTC+TGG | + | chr3_1:78096854-78096873 | None:intergenic | 45.0% |
| TTGGGATACAGACATGTCAC+CGG | - | chr3_1:78096892-78096911 | Msa0377550:intron | 45.0% | |
| !! | GCTGATGCACTTGCTTTTGT+AGG | + | chr3_1:78097129-78097148 | None:intergenic | 45.0% |
| AGAATATCTGCCACGCATCA+AGG | + | chr3_1:78097157-78097176 | None:intergenic | 45.0% | |
| ! | TTACGCGGGTTTTCCTAAAC+TGG | - | chr3_1:78097349-78097368 | Msa0377550:intron | 45.0% |
| GTTGTACTGTTTCCACTTGG+TGG | - | chr3_1:78097703-78097722 | Msa0377550:intron | 45.0% | |
| ! | TGTACTGTTTCCACTTGGTG+GGG | - | chr3_1:78097705-78097724 | Msa0377550:intron | 45.0% |
| TCGAACACAGATAGCAGACA+CGG | - | chr3_1:78097860-78097879 | Msa0377550:intron | 45.0% | |
| TGAATATCTGCCACGCATCA+AGG | + | chr3_1:78098290-78098309 | None:intergenic | 45.0% | |
| !! | GCCTTGCTTTTGGACTATGA+TGG | - | chr3_1:78098628-78098647 | Msa0377550:intron | 45.0% |
| TCGTGACTGTGCATTCATGT+TGG | - | chr3_1:78098675-78098694 | Msa0377550:intron | 45.0% | |
| ! | GATGTGTGCTGCTGTTAAAG+AGG | - | chr3_1:78098783-78098802 | Msa0377550:intron | 45.0% |
| CTCTATTACACTGGTAGCCA+TGG | - | chr3_1:78099249-78099268 | Msa0377550:five_prime_UTR | 45.0% | |
| TTACACTGGTAGCCATGGAA+TGG | - | chr3_1:78099254-78099273 | Msa0377550:five_prime_UTR | 45.0% | |
| TAGCCATGGAATGGACATCA+TGG | - | chr3_1:78099263-78099282 | Msa0377550:five_prime_UTR | 45.0% | |
| AGCCATGGAATGGACATCAT+GGG | - | chr3_1:78099264-78099283 | Msa0377550:five_prime_UTR | 45.0% | |
| CCACCTCATTAATCATTGGC+AGG | + | chr3_1:78099481-78099500 | None:intergenic | 45.0% | |
| CCTGCCAATGATTAATGAGG+TGG | - | chr3_1:78099478-78099497 | Msa0377550:five_prime_UTR | 45.0% | |
| AGGTCTGACCTGTGATTAAC+TGG | - | chr3_1:78099978-78099997 | Msa0377550:five_prime_UTR | 45.0% | |
| GGTCTGACCTGTGATTAACT+GGG | - | chr3_1:78099979-78099998 | Msa0377550:five_prime_UTR | 45.0% | |
| CCCTTATCCCAGTTAATCAC+AGG | + | chr3_1:78099989-78100008 | None:intergenic | 45.0% | |
| TAACTGGGATAAGGGAGAAG+CGG | - | chr3_1:78099994-78100013 | Msa0377550:five_prime_UTR | 45.0% | |
| GCTTTGCGAGAGGGAATTAA+AGG | - | chr3_1:78100303-78100322 | Msa0377550:five_prime_UTR | 45.0% | |
| CGAGAGGGAATTAAAGGCTA+TGG | - | chr3_1:78100309-78100328 | Msa0377550:five_prime_UTR | 45.0% | |
| ! | ATACGTGGTTTGGCAGAGGA+GGG | - | chr3_1:78093600-78093619 | Msa0377550:intron | 50.0% |
| GTGCGTGCAAACATTGTGCT+CGG | + | chr3_1:78093769-78093788 | Msa0377540:intron | 50.0% | |
| TAAGCGAGGAATGGTTGCTG+AGG | - | chr3_1:78093812-78093831 | Msa0377550:intron | 50.0% | |
| GCATTGAAGGTCACAACCGA+AGG | + | chr3_1:78093879-78093898 | Msa0377540:intron | 50.0% | |
| ! | TCTTTCTCAGGGTTCTGGTC+AGG | - | chr3_1:78093995-78094014 | Msa0377550:CDS | 50.0% |
| ! | GGTTCTGGTCAGGTTTCTGA+TGG | - | chr3_1:78094005-78094024 | Msa0377550:CDS | 50.0% |
| GGTGAAGGAAATGTGTGAGG+CGG | - | chr3_1:78094046-78094065 | Msa0377550:intron | 50.0% | |
| GTGAAGGAAATGTGTGAGGC+GGG | - | chr3_1:78094047-78094066 | Msa0377550:intron | 50.0% | |
| ATTGAGTCGTTGTCCCGACT+AGG | + | chr3_1:78094434-78094453 | Msa0377540:intron | 50.0% | |
| CTTATTGGGTTCTGTCAGGC+AGG | - | chr3_1:78094566-78094585 | Msa0377550:CDS | 50.0% | |
| GGGAATAAAGAAGACGCGTG+AGG | + | chr3_1:78094778-78094797 | None:intergenic | 50.0% | |
| CAGCCCACTCCTTATAAGCT+TGG | + | chr3_1:78094799-78094818 | None:intergenic | 50.0% | |
| !! | GAAGGGATAAAGGGCACCTT+TGG | + | chr3_1:78095038-78095057 | None:intergenic | 50.0% |
| GTTTGGGCTTTCTGCTCCAA+TGG | - | chr3_1:78095416-78095435 | Msa0377550:intron | 50.0% | |
| TTCAGAAGCTCAACGGTCGA+TGG | - | chr3_1:78095519-78095538 | Msa0377550:intron | 50.0% | |
| GCTACTCCAAGAGTAGTGAC+AGG | - | chr3_1:78095545-78095564 | Msa0377550:intron | 50.0% | |
| !! | GCGTTGGCTTGCTAAAAACC+TGG | - | chr3_1:78095671-78095690 | Msa0377550:intron | 50.0% |
| GTTGCAGCGGTATGGGAATA+AGG | + | chr3_1:78095782-78095801 | None:intergenic | 50.0% | |
| TGGAAAGGTTGCAGCGGTAT+GGG | + | chr3_1:78095789-78095808 | None:intergenic | 50.0% | |
| ACCATGTGGAAAGGTTGCAG+CGG | + | chr3_1:78095795-78095814 | None:intergenic | 50.0% | |
| !! | ACTGGCTTGAGCTGATGGAT+TGG | - | chr3_1:78096632-78096651 | Msa0377550:intron | 50.0% |
| !! | GCTTGAGCTGATGGATTGGA+AGG | - | chr3_1:78096636-78096655 | Msa0377550:intron | 50.0% |
| !! | TGTCATGGTCAAGTTGGCAG+AGG | + | chr3_1:78096692-78096711 | None:intergenic | 50.0% |
| CGTGAGTGTCATGGTCAAGT+TGG | + | chr3_1:78096698-78096717 | None:intergenic | 50.0% | |
| ACTTGACCATGACACTCACG+AGG | - | chr3_1:78096698-78096717 | Msa0377550:intron | 50.0% | |
| GCTATACCTCGTGAGTGTCA+TGG | + | chr3_1:78096707-78096726 | None:intergenic | 50.0% | |
| TGACACTCACGAGGTATAGC+AGG | - | chr3_1:78096707-78096726 | Msa0377550:intron | 50.0% | |
| TGCCAAAACGTCCTCCTTCA+CGG | - | chr3_1:78096807-78096826 | Msa0377550:intron | 50.0% | |
| !! | AATTCAGGTTGTGGCCGTGA+AGG | + | chr3_1:78096824-78096843 | None:intergenic | 50.0% |
| TCACGGCCACAACCTGAATT+AGG | - | chr3_1:78096824-78096843 | Msa0377550:intron | 50.0% | |
| GGAGTAGATTCAGAAGAGGG+AGG | - | chr3_1:78096863-78096882 | Msa0377550:intron | 50.0% | |
| ! | AGAAGAGGGAGGCACAGTTT+GGG | - | chr3_1:78096874-78096893 | Msa0377550:intron | 50.0% |
| ACAGACATGTCACCGGTAGA+AGG | - | chr3_1:78096899-78096918 | Msa0377550:intron | 50.0% | |
| GGTGCAGACGTGAGATTAAC+CGG | - | chr3_1:78096920-78096939 | Msa0377550:intron | 50.0% | |
| !! | TGCAAGCACTGAATCAGTGC+CGG | + | chr3_1:78096942-78096961 | None:intergenic | 50.0% |
| CAAGACACTCACATGTGCGA+AGG | + | chr3_1:78097235-78097254 | None:intergenic | 50.0% | |
| GTGAGTGTCTTGAAGTGTGC+AGG | - | chr3_1:78097243-78097262 | Msa0377550:intron | 50.0% | |
| ! | GTACTGTTTCCACTTGGTGG+GGG | - | chr3_1:78097706-78097725 | Msa0377550:intron | 50.0% |
| ! | GCACCGACACTTCTGATTGA+AGG | + | chr3_1:78097945-78097964 | None:intergenic | 50.0% |
| TCAACTAGCACCTTGATGCG+TGG | - | chr3_1:78098277-78098296 | Msa0377550:five_prime_UTR | 50.0% | |
| CCAGAAACTCACATGTGCGA+AGG | + | chr3_1:78098368-78098387 | None:intergenic | 50.0% | |
| CCTTCGCACATGTGAGTTTC+TGG | - | chr3_1:78098365-78098384 | Msa0377550:intron | 50.0% | |
| ! | GTGTGCTGCTGTTAAAGAGG+TGG | - | chr3_1:78098786-78098805 | Msa0377550:intron | 50.0% |
| ! | CTACAGACAAGCAGGTACTG+TGG | - | chr3_1:78099333-78099352 | Msa0377550:five_prime_UTR | 50.0% |
| ATTGGCAGGAATTCAGCAGC+AGG | + | chr3_1:78099467-78099486 | None:intergenic | 50.0% | |
| TTCAGGGCTTTCCACGTTTG+CGG | - | chr3_1:78099842-78099861 | Msa0377550:five_prime_UTR | 50.0% | |
| CCATGAGTTAACCGCAAACG+TGG | + | chr3_1:78099856-78099875 | None:intergenic | 50.0% | |
| CCACGTTTGCGGTTAACTCA+TGG | - | chr3_1:78099853-78099872 | Msa0377550:five_prime_UTR | 50.0% | |
| GCGGTTAACTCATGGTTGCA+AGG | - | chr3_1:78099861-78099880 | Msa0377550:five_prime_UTR | 50.0% | |
| !! | AGCTTGCTGTGAGGATTGTG+TGG | - | chr3_1:78100226-78100245 | Msa0377550:five_prime_UTR | 50.0% |
| AACGTAACAGGCTTTGCGAG+AGG | - | chr3_1:78100293-78100312 | Msa0377550:five_prime_UTR | 50.0% | |
| ACGTAACAGGCTTTGCGAGA+GGG | - | chr3_1:78100294-78100313 | Msa0377550:five_prime_UTR | 50.0% | |
| ! | ATGGGTTTTGCAAGACGGGG+AGG | - | chr3_1:78093394-78093413 | Msa0377550:three_prime_UTR | 55.0% |
| ! | GATACGTGGTTTGGCAGAGG+AGG | - | chr3_1:78093599-78093618 | Msa0377550:intron | 55.0% |
| CTGATCATGCTGGCGAGCTT+AGG | - | chr3_1:78094099-78094118 | Msa0377550:intron | 55.0% | |
| AGTCGTTGTCCCGACTAGGA+AGG | + | chr3_1:78094430-78094449 | Msa0377540:intron | 55.0% | |
| GTGGAAAGGTTGCAGCGGTA+TGG | + | chr3_1:78095790-78095809 | None:intergenic | 55.0% | |
| ACCGCTGCAACCTTTCCACA+TGG | - | chr3_1:78095791-78095810 | Msa0377550:intron | 55.0% | |
| GAGGACTGTACACCAGTGCT+AGG | - | chr3_1:78096579-78096598 | Msa0377550:intron | 55.0% | |
| !! | CATGGTCAAGTTGGCAGAGG+TGG | + | chr3_1:78096689-78096708 | None:intergenic | 55.0% |
| ! | CAGAAGAGGGAGGCACAGTT+TGG | - | chr3_1:78096873-78096892 | Msa0377550:intron | 55.0% |
| CTCACGTCTGCACCTTCTAC+CGG | + | chr3_1:78096914-78096933 | None:intergenic | 55.0% | |
| TGGTTCAGCTGTGGAAGCTG+AGG | + | chr3_1:78097011-78097030 | None:intergenic | 55.0% | |
| TCAGCTAGCACCTTGATGCG+TGG | - | chr3_1:78097144-78097163 | Msa0377550:intron | 55.0% | |
| ACTGTACTACCCCCACCAAG+TGG | + | chr3_1:78097718-78097737 | None:intergenic | 55.0% | |
| CTCACTCAGCGAAACGACAG+AGG | + | chr3_1:78097811-78097830 | None:intergenic | 55.0% | |
| TGGTTCAGCTGTGGAAGCTG+AGG | + | chr3_1:78097011-78097030 | None:intergenic | 55.0% | |
| GGCCCATGATGTCCATTCCA+TGG | + | chr3_1:78099269-78099288 | None:intergenic | 55.0% | |
| GCAGGAATTCAGCAGCAGGT+TGG | + | chr3_1:78099463-78099482 | None:intergenic | 55.0% | |
| TTGCAAGACGGGGAGGCTAG+AGG | - | chr3_1:78093401-78093420 | Msa0377550:three_prime_UTR | 60.0% | |
| ! | TGGTTTGGCAGAGGAGGGCA+GGG | - | chr3_1:78093605-78093624 | Msa0377550:intron | 60.0% |
| ! | GGCCGTGAAGGAGGACGTTT+TGG | + | chr3_1:78096812-78096831 | None:intergenic | 60.0% |
| ! | TCAGGTTGTGGCCGTGAAGG+AGG | + | chr3_1:78096821-78096840 | None:intergenic | 60.0% |
| !! | GGAAGCTGAGGCGTTGCTTC+TGG | + | chr3_1:78096999-78097018 | None:intergenic | 60.0% |
| !! | GGAAGCTGAGGCGTTGCTTC+TGG | + | chr3_1:78096999-78097018 | None:intergenic | 60.0% |
| ! | GTGGTTTGGCAGAGGAGGGC+AGG | - | chr3_1:78093604-78093623 | Msa0377550:intron | 65.0% |
| TTGGCAGAGGAGGGCAGGGT+TGG | - | chr3_1:78093609-78093628 | Msa0377550:intron | 65.0% | |
| !! | GAGGGCAGGGTTGGTGAAGC+TGG | - | chr3_1:78093618-78093637 | Msa0377550:intron | 65.0% |
| TCTGCGCGTGTGTTGGGCGT+TGG | - | chr3_1:78095655-78095674 | Msa0377550:intron | 65.0% | |
| !! | GCGGGACTGGCTTGAGCTGA+TGG | - | chr3_1:78096627-78096646 | Msa0377550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 78093385 | 78100480 | 78093385 | ID=Msa0377550;Name=Msa0377550 |
| chr3_1 | mRNA | 78093385 | 78100480 | 78093385 | ID=Msa0377550-mRNA-1;Parent=Msa0377550;Name=Msa0377550-mRNA-1;_AED=0.29;_eAED=0.31;_QI=2057|0.12|0.66|1|0.12|0.22|9|67|215 |
| chr3_1 | exon | 78093385 | 78093562 | 78093385 | ID=Msa0377550-mRNA-1:exon:18755;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78093983 | 78094060 | 78093983 | ID=Msa0377550-mRNA-1:exon:18754;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78094369 | 78094425 | 78094369 | ID=Msa0377550-mRNA-1:exon:18753;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78094503 | 78094642 | 78094503 | ID=Msa0377550-mRNA-1:exon:18752;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78095159 | 78095262 | 78095159 | ID=Msa0377550-mRNA-1:exon:18751;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78096435 | 78096463 | 78096435 | ID=Msa0377550-mRNA-1:exon:18750;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78097488 | 78097559 | 78097488 | ID=Msa0377550-mRNA-1:exon:18749;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78097884 | 78098341 | 78097884 | ID=Msa0377550-mRNA-1:exon:18748;Parent=Msa0377550-mRNA-1 |
| chr3_1 | exon | 78098825 | 78100480 | 78098825 | ID=Msa0377550-mRNA-1:exon:18747;Parent=Msa0377550-mRNA-1 |
| chr3_1 | five_prime_UTR | 78098825 | 78100480 | 78098825 | ID=Msa0377550-mRNA-1:five_prime_utr;Parent=Msa0377550-mRNA-1 |
| chr3_1 | five_prime_UTR | 78097941 | 78098341 | 78097941 | ID=Msa0377550-mRNA-1:five_prime_utr;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78097884 | 78097940 | 78097884 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78097488 | 78097559 | 78097488 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78096435 | 78096463 | 78096435 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78095159 | 78095262 | 78095159 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78094503 | 78094642 | 78094503 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78094369 | 78094425 | 78094369 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78093983 | 78094060 | 78093983 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | CDS | 78093452 | 78093562 | 78093452 | ID=Msa0377550-mRNA-1:cds;Parent=Msa0377550-mRNA-1 |
| chr3_1 | three_prime_UTR | 78093385 | 78093451 | 78093385 | ID=Msa0377550-mRNA-1:three_prime_utr;Parent=Msa0377550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
