AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0195000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195000 MtrunA17_Chr2g0286231 99.643 560 2 0 1 560 1 560 0.0 1150
Msa0195000 MtrunA17_Chr1g0205411 25.095 263 194 3 211 470 233 495 8.34e-16 80.5
Msa0195000 MtrunA17_Chr8g0344341 23.574 263 198 3 211 470 234 496 1.49e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195000 AT2G39090.1 71.429 560 158 1 1 560 1 558 0.0 816
Msa0195000 AT2G39090.2 71.345 513 145 1 1 513 1 511 0.0 740
Msa0195000 AT3G48150.1 24.046 262 193 4 244 499 267 528 6.28e-12 68.6
Msa0195000 AT3G48150.2 23.171 328 234 6 178 499 100 415 1.37e-11 67.4

Find 128 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTATTAAGTGTGTATTATT+AGG 0.148299 2_1:-11609903 None:intergenic
TCTTCAACAAAATTGATTAT+TGG 0.194580 2_1:-11604526 None:intergenic
TTGCCGATGAATTTGTTATT+AGG 0.211280 2_1:+11606551 Msa0195000:CDS
ATCACCACTCTTCTCGAAAA+TGG 0.215246 2_1:+11604626 Msa0195000:CDS
GGAGCCCTCACACTTCTATT+TGG 0.222284 2_1:-11607321 None:intergenic
TTCTCTCCCACCAGAATTAC+TGG 0.231176 2_1:-11611230 None:intergenic
GTGATAGCCTCAAGTATAAA+AGG 0.239509 2_1:-11607050 None:intergenic
ATGAAGGTTGAAGCTATTAT+TGG 0.261152 2_1:+11610271 Msa0195000:intron
TTTGTTGAAGAATCACTTTC+CGG 0.271246 2_1:+11604538 Msa0195000:five_prime_UTR
CGCATTATCAGGCTGCATTA+AGG 0.287884 2_1:+11611551 Msa0195000:CDS
AGGTTTGGTTCATACATATT+TGG 0.303349 2_1:+11611108 Msa0195000:intron
TCCATACATCATAACATATA+TGG 0.310210 2_1:+11610425 Msa0195000:CDS
TCATTGTCTTCATCTTCTTC+AGG 0.314723 2_1:-11612147 None:intergenic
GGAAGCTTTGTCGCATTATC+AGG 0.318728 2_1:+11611540 Msa0195000:CDS
ATTGATAACTGATGTATTGC+AGG 0.321031 2_1:-11605731 None:intergenic
CCTTGGTATGTGCGTATATC+AGG 0.328266 2_1:-11610927 None:intergenic
TCCTATTCTGGCAGGTGGCT+TGG 0.331842 2_1:+11609851 Msa0195000:intron
CCTTGGTGCTGCACTAGCTT+TGG 0.339345 2_1:+11611387 Msa0195000:CDS
GTATTAAGTGTGTATTATTA+GGG 0.342297 2_1:-11609902 None:intergenic
TATCACCGCTTTATCAGAAA+TGG 0.352829 2_1:+11607067 Msa0195000:CDS
ATATATTGAGTGAGTGGTTT+GGG 0.353572 2_1:+11612449 Msa0195000:three_prime_UTR
GTATATCAGGTCTCAATTCT+TGG 0.355867 2_1:-11610914 None:intergenic
TCATCTTCTTCAGGTGCATC+AGG 0.357087 2_1:-11612138 None:intergenic
CCAGAATGAAGCAGCAAAAC+GGG 0.358228 2_1:+11611886 Msa0195000:CDS
GATGTGCATGCCAGTAATTC+TGG 0.359532 2_1:+11611220 Msa0195000:CDS
TCCATATATGTTATGATGTA+TGG 0.364309 2_1:-11610426 None:intergenic
AGCAGACGACATACTCTGTT+TGG 0.371372 2_1:-11605668 None:intergenic
CATATATTGAGTGAGTGGTT+TGG 0.390424 2_1:+11612448 Msa0195000:three_prime_UTR
GCAGCTGTGTCTGCCTTTAG+AGG 0.397555 2_1:+11610888 Msa0195000:CDS
GGCAAATTTCGAGCTTTGCT+TGG 0.400434 2_1:-11606533 None:intergenic
AGCATTATCGTATGCTGAAC+AGG 0.402919 2_1:+11610590 Msa0195000:CDS
GCAAAGGCTTTAAAATTAGT+AGG 0.411992 2_1:+11611196 Msa0195000:CDS
GGAGTTCATTATCGTCAAAT+AGG 0.418518 2_1:+11605692 Msa0195000:CDS
CTCTAAGAATCAACGTTCAC+CGG 0.425073 2_1:-11604557 None:intergenic
GATATATGTTAACCAATGTT+TGG 0.427495 2_1:+11612596 Msa0195000:three_prime_UTR
CATGCATTCCATGTTTAATA+CGG 0.430450 2_1:-11612406 None:intergenic
TTATCGCCAACTGTTGCATC+TGG 0.434614 2_1:+11612380 Msa0195000:three_prime_UTR
TATATCAGGTCTCAATTCTT+GGG 0.435812 2_1:-11610913 None:intergenic
AAGGCAGACACAGCTGCTTC+CGG 0.436700 2_1:-11610882 None:intergenic
CAATTCTTGGGCTCCTCTAA+AGG 0.437747 2_1:-11610901 None:intergenic
TTTAAAGCCTTTGCAGATTG+AGG 0.438951 2_1:-11611187 None:intergenic
TAAGATTATTTCTGTGCTCC+TGG 0.443224 2_1:+11612559 Msa0195000:three_prime_UTR
CATGTTATCGAGGGTCGAAA+TGG 0.443860 2_1:+11611418 Msa0195000:CDS
AGCTTCCGACAGCATATTTG+TGG 0.448816 2_1:-11611524 None:intergenic
ACTGATGTATTGCAGGAATT+CGG 0.449754 2_1:-11605724 None:intergenic
AACAGCAGCTCGACTATGTC+TGG 0.452770 2_1:-11606591 None:intergenic
CCCAGAATGAAGCAGCAAAA+CGG 0.458552 2_1:+11611885 Msa0195000:CDS
CTTGAGTCAGTAGGATCAAA+TGG 0.459954 2_1:-11607342 None:intergenic
CTATGAGTCTGCGTTAAGGC+TGG 0.470224 2_1:+11611354 Msa0195000:CDS
GAAGATTCAGCATTTGCAGC+AGG 0.472445 2_1:-11604840 None:intergenic
GCAGACGACATACTCTGTTT+GGG 0.477597 2_1:-11605667 None:intergenic
ATTTATTATTGACAATGAAA+CGG 0.484844 2_1:+11610859 Msa0195000:CDS
CATCATTTCATTGTTTCCGC+AGG 0.489117 2_1:+11607106 Msa0195000:CDS
AGAGTGGTGATTTGATCCTT+CGG 0.499551 2_1:-11604614 None:intergenic
AACAATATATACTATTTCCA+AGG 0.500175 2_1:-11612246 None:intergenic
AGGCTGGAACCTGGTTACCT+TGG 0.502118 2_1:+11611370 Msa0195000:CDS
GCGTTTAGAGAAGCAAATGA+AGG 0.504166 2_1:+11611916 Msa0195000:CDS
GTGAGTGGTTTGGGTTGGAC+TGG 0.504570 2_1:+11612458 Msa0195000:three_prime_UTR
ATTGAGTGAGTGGTTTGGGT+TGG 0.505428 2_1:+11612453 Msa0195000:three_prime_UTR
ATCCTACTGACTCAAGTCGT+TGG 0.508303 2_1:+11607349 Msa0195000:CDS
CTCATTTCACCCTACTGCTA+AGG 0.512262 2_1:-11612278 None:intergenic
TCACCTCAAAACTGAAAGCT+TGG 0.513201 2_1:+11604866 Msa0195000:CDS
TTTGAGATGGCCTTAGCAGT+AGG 0.513918 2_1:+11612268 Msa0195000:three_prime_UTR
TTGAGCGATATCTTAAAGAC+TGG 0.515465 2_1:+11611458 Msa0195000:CDS
TTGAGATGGCCTTAGCAGTA+GGG 0.515605 2_1:+11612269 Msa0195000:three_prime_UTR
CGTATTAAACATGGAATGCA+TGG 0.519504 2_1:+11612407 Msa0195000:three_prime_UTR
AGTTCTATGAGTCTGCGTTA+AGG 0.520034 2_1:+11611350 Msa0195000:CDS
TTTCCTAATAACAAATTCAT+CGG 0.522585 2_1:-11606554 None:intergenic
ATCAGTTATCAATGAAAATG+AGG 0.522598 2_1:+11605741 Msa0195000:CDS
CATTTCGACCCTCGATAACA+TGG 0.525276 2_1:-11611417 None:intergenic
CTATTTACAAAGAATGCCTA+AGG 0.527178 2_1:+11606615 Msa0195000:CDS
ATCACCGCTTTATCAGAAAT+GGG 0.528807 2_1:+11607068 Msa0195000:CDS
GACTGAACTTCTATGAGTAT+TGG 0.530270 2_1:+11612200 Msa0195000:exon
AACGAAGGGAAAAGTACCCT+TGG 0.534134 2_1:+11612229 Msa0195000:three_prime_UTR
ATTCTCATATATTGAGTGAG+TGG 0.534861 2_1:+11612443 Msa0195000:three_prime_UTR
ACCTTGGTGGCCTATGTGGA+AGG 0.536008 2_1:+11612305 Msa0195000:three_prime_UTR
CTAAACTTGTGACCAAACAT+TGG 0.539438 2_1:-11612608 None:intergenic
CTCTTCGATACTCTCTTTCG+CGG 0.539617 2_1:-11605004 None:intergenic
TAATTCTGGTGGGAGAGAAA+AGG 0.541741 2_1:+11611234 Msa0195000:CDS
GGCTGAGCTCCATGTTATCG+AGG 0.543303 2_1:+11611408 Msa0195000:CDS
TGATAGCCTCAAGTATAAAA+GGG 0.550116 2_1:-11607049 None:intergenic
AAGAAGAATGGAAGTTCCGA+AGG 0.552894 2_1:+11604598 Msa0195000:exon
ATGTATTATTAAGCTCAAGC+TGG 0.554436 2_1:+11612516 Msa0195000:three_prime_UTR
AACAGAGTATGTCGTCTGCT+CGG 0.554802 2_1:+11605671 Msa0195000:CDS
ATTATTGACAATGAAACGGC+CGG 0.560636 2_1:+11610863 Msa0195000:CDS
TGCTGCCACAAATATGCTGT+CGG 0.561575 2_1:+11611519 Msa0195000:CDS
AGTGCAGCACCAAGGTAACC+AGG 0.566814 2_1:-11611379 None:intergenic
AATTACCTTGGTGGCCTATG+TGG 0.570053 2_1:+11612301 Msa0195000:three_prime_UTR
ATTACCTTCACTATGTACCC+TGG 0.576596 2_1:-11610726 None:intergenic
GCTGAGCTCCATGTTATCGA+GGG 0.579949 2_1:+11611409 Msa0195000:CDS
AGTATTGGTATCCAAACGAA+GGG 0.582241 2_1:+11612215 Msa0195000:exon
CAGAATGTTGAAGTTCAAGC+TGG 0.583895 2_1:+11612482 Msa0195000:three_prime_UTR
GAAGACAATGATGTTGAAGA+TGG 0.585143 2_1:+11612159 Msa0195000:CDS
CTTAATACTTGAGATTGCAA+AGG 0.590540 2_1:+11609917 Msa0195000:CDS
AGCAATGCCTCAATCTGCAA+AGG 0.593004 2_1:+11611180 Msa0195000:CDS
GACTCCAAATAGAAGTGTGA+GGG 0.597056 2_1:+11607317 Msa0195000:intron
GGCTTTATATGCTTCTAGAG+AGG 0.598593 2_1:+11611150 Msa0195000:CDS
ATTGACGAGAGGCATATACC+AGG 0.599836 2_1:+11610708 Msa0195000:CDS
TCTGCGTTAAGGCTGGAACC+TGG 0.600767 2_1:+11611361 Msa0195000:CDS
TGAAATGAGAATTACCTTGG+TGG 0.614718 2_1:+11612292 Msa0195000:three_prime_UTR
AATGATGTTGAAGATGGTGA+TGG 0.615312 2_1:+11612165 Msa0195000:CDS
TGAGCGATATCTTAAAGACT+GGG 0.616659 2_1:+11611459 Msa0195000:CDS
ACCTTCCACATAGGCCACCA+AGG 0.621027 2_1:-11612306 None:intergenic
ACAATATATACTATTTCCAA+GGG 0.625101 2_1:-11612245 None:intergenic
AGATCCCATTTCTGATAAAG+CGG 0.626006 2_1:-11607072 None:intergenic
GAGTATTGGTATCCAAACGA+AGG 0.627840 2_1:+11612214 Msa0195000:exon
GGGTGAAATGAGAATTACCT+TGG 0.633665 2_1:+11612289 Msa0195000:three_prime_UTR
ATATCGCTCAAGCAGAGACA+CGG 0.641164 2_1:-11611446 None:intergenic
TATTATTAAGCTCAAGCTGG+AGG 0.641464 2_1:+11612519 Msa0195000:three_prime_UTR
TCTGGTGACCGTATTAAACA+TGG 0.642994 2_1:+11612398 Msa0195000:three_prime_UTR
ATCTCATCAAATGATTACAA+AGG 0.644386 2_1:+11609509 Msa0195000:CDS
CGGTCACCAGATGCAACAGT+TGG 0.644603 2_1:-11612386 None:intergenic
GAACAAAGCAGCTCTAGTTG+AGG 0.646708 2_1:+11605928 Msa0195000:CDS
TATTGATCCTGCAAGACCAG+AGG 0.647842 2_1:+11610521 Msa0195000:CDS
TGTGTCACATCACAGATGGA+AGG 0.648304 2_1:+11606506 Msa0195000:intron
TATACCAGGGTACATAGTGA+AGG 0.648445 2_1:+11610722 Msa0195000:CDS
TATCTTACAAATATATAACC+AGG 0.650026 2_1:-11612577 None:intergenic
AGACTCCAAATAGAAGTGTG+AGG 0.652884 2_1:+11607316 Msa0195000:intron
TATTATTGGAAAGAATGAAG+AGG 0.659050 2_1:+11610285 Msa0195000:CDS
AGAGTATTCGAATTGACGAG+AGG 0.664575 2_1:+11610697 Msa0195000:intron
ACAGTGAAAACCTTCCACAT+AGG 0.667609 2_1:-11612315 None:intergenic
CCTGATATACGCACATACCA+AGG 0.671979 2_1:+11610927 Msa0195000:CDS
CAGAATGAAGCAGCAAAACG+GGG 0.672162 2_1:+11611887 Msa0195000:CDS
GTGCATGCCAGTAATTCTGG+TGG 0.684548 2_1:+11611223 Msa0195000:CDS
TGCATGCCAGTAATTCTGGT+GGG 0.685043 2_1:+11611224 Msa0195000:CDS
TTGACGAGAGGCATATACCA+GGG 0.694048 2_1:+11610709 Msa0195000:CDS
CCAAAGCTAGTGCAGCACCA+AGG 0.694097 2_1:-11611387 None:intergenic
AGCCAACGACTTGAGTCAGT+AGG 0.695824 2_1:-11607351 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATCTTTTGTTATAAA+AGG - chr2_1:11605150-11605169 None:intergenic 10.0%
!!! TGAACAAATATTAATTTTTA+CGG + chr2_1:11607575-11607594 Msa0195000:intron 10.0%
!!! ATTTATTTTTTTTAAGTAAC+CGG - chr2_1:11607839-11607858 None:intergenic 10.0%
!!! AATTTTATTGCAAAATATAT+GGG - chr2_1:11609228-11609247 None:intergenic 10.0%
!! TTTCGATTCATTTATTAATT+TGG + chr2_1:11604762-11604781 Msa0195000:intron 15.0%
!! TTCGATTCATTTATTAATTT+GGG + chr2_1:11604763-11604782 Msa0195000:intron 15.0%
!!! ATTTTTGAAAAATGTTAATG+AGG - chr2_1:11606276-11606295 None:intergenic 15.0%
!! AAATATTAAAATCTTTCTTG+TGG + chr2_1:11606292-11606311 Msa0195000:intron 15.0%
!! AATATTAAAATCTTTCTTGT+GGG + chr2_1:11606293-11606312 Msa0195000:intron 15.0%
!!! ATAAATTTTGCGTATTTTAT+CGG + chr2_1:11606450-11606469 Msa0195000:intron 15.0%
!!! TTTATTTTTTTTAAGTAACC+GGG - chr2_1:11607838-11607857 None:intergenic 15.0%
!! AAAACGACATATTAATAAAA+TGG - chr2_1:11608003-11608022 None:intergenic 15.0%
!!! TGTTTTAAAAAAAGTAATTG+TGG + chr2_1:11608266-11608285 Msa0195000:intron 15.0%
!! TTTCTATACATGATATAATA+TGG + chr2_1:11608730-11608749 Msa0195000:intron 15.0%
!!! ATTCATTTGATTTGTTAATT+TGG + chr2_1:11608757-11608776 Msa0195000:intron 15.0%
!! GTTAATTGTCAAAATAAAAA+AGG - chr2_1:11609197-11609216 None:intergenic 15.0%
!!! CAATTTTATTGCAAAATATA+TGG - chr2_1:11609229-11609248 None:intergenic 15.0%
!!! ATTTTATTTCTTCATATACA+TGG + chr2_1:11609349-11609368 Msa0195000:intron 15.0%
!!! ATGTACTTTTTGAAAATTAA+TGG - chr2_1:11610095-11610114 None:intergenic 15.0%
!! ATTTATTATTGACAATGAAA+CGG + chr2_1:11610859-11610878 Msa0195000:CDS 15.0%
!!! GTATTGAATTCAAATTTTGA+AGG + chr2_1:11604458-11604477 Msa0195000:five_prime_UTR 20.0%
!! TCTTCAACAAAATTGATTAT+TGG - chr2_1:11604529-11604548 None:intergenic 20.0%
!! GAAAAAAGAAGAAGAAAAAT+AGG - chr2_1:11604689-11604708 None:intergenic 20.0%
!! AAATGCGAAAAAAAAAAAGT+GGG - chr2_1:11604711-11604730 None:intergenic 20.0%
!!! TTTGTGTTTTTTGAATAACA+GGG + chr2_1:11604798-11604817 Msa0195000:intron 20.0%
!!! ATTTTCAACTTCTTTCTATA+AGG - chr2_1:11605238-11605257 None:intergenic 20.0%
!!! AATAAGTTGAAAGTAACTTA+CGG + chr2_1:11605427-11605446 Msa0195000:intron 20.0%
!!! AAGCTTTTCTGAAATATTTT+TGG + chr2_1:11605565-11605584 Msa0195000:intron 20.0%
!!! AGCTTTTCTGAAATATTTTT+GGG + chr2_1:11605566-11605585 Msa0195000:intron 20.0%
!! TTTATCTAATTCATGATAGT+TGG + chr2_1:11605778-11605797 Msa0195000:intron 20.0%
!! TTTCCTAATAACAAATTCAT+CGG - chr2_1:11606557-11606576 None:intergenic 20.0%
!!! AAATTGATTTTACAAACCTT+AGG - chr2_1:11606634-11606653 None:intergenic 20.0%
!! CAAAATGCAAATTATATATG+AGG - chr2_1:11606868-11606887 None:intergenic 20.0%
!!! ATGTTGTATATTTGTTGAAT+TGG + chr2_1:11606947-11606966 Msa0195000:intron 20.0%
!!! GTTTATTGATTAAGTAATTG+TGG + chr2_1:11608241-11608260 Msa0195000:intron 20.0%
!! TATACATGAATTTGTAAGAT+TGG + chr2_1:11608460-11608479 Msa0195000:intron 20.0%
!! TTAATATATGTGAGAACAAT+GGG - chr2_1:11608943-11608962 None:intergenic 20.0%
!! ATTAATATATGTGAGAACAA+TGG - chr2_1:11608944-11608963 None:intergenic 20.0%
!! AGATATAAACAATCATTCTA+GGG + chr2_1:11609015-11609034 Msa0195000:intron 20.0%
!!! ATTGAAGTATCTTTTGAATT+TGG + chr2_1:11609372-11609391 Msa0195000:intron 20.0%
!! GTATTAAGTGTGTATTATTA+GGG - chr2_1:11609905-11609924 None:intergenic 20.0%
!! AGTATTAAGTGTGTATTATT+AGG - chr2_1:11609906-11609925 None:intergenic 20.0%
!! AAAAGGATGCTTATAAAAAA+GGG - chr2_1:11610031-11610050 None:intergenic 20.0%
!!! GAATTTTGAAAAGGTAATAA+AGG + chr2_1:11610315-11610334 Msa0195000:intron 20.0%
!! AAATTACATAACAAATAAGC+AGG - chr2_1:11610380-11610399 None:intergenic 20.0%
!!! TGCTTATTTGTTATGTAATT+TGG + chr2_1:11610379-11610398 Msa0195000:intron 20.0%
!! TTAGTAGTATTATTTAATGC+CGG + chr2_1:11610613-11610632 Msa0195000:intron 20.0%
!!! TGTTTTAGTTTAGATCAAAT+AGG + chr2_1:11610754-11610773 Msa0195000:intron 20.0%
!!! GTTTTAGTTTAGATCAAATA+GGG + chr2_1:11610755-11610774 Msa0195000:intron 20.0%
!!! TTTTAGTTTAGATCAAATAG+GGG + chr2_1:11610756-11610775 Msa0195000:intron 20.0%
!! AGATATAAATATCATAGCAA+CGG + chr2_1:11611697-11611716 Msa0195000:intron 20.0%
!! ATAAAAACTGTGCAAATAAT+GGG - chr2_1:11612005-11612024 None:intergenic 20.0%
!! TATAAAAACTGTGCAAATAA+TGG - chr2_1:11612006-11612025 None:intergenic 20.0%
!!! ATTTTGATTGACAATATTAG+AGG + chr2_1:11612061-11612080 Msa0195000:intron 20.0%
!! ACAATATATACTATTTCCAA+GGG - chr2_1:11612248-11612267 None:intergenic 20.0%
!! AACAATATATACTATTTCCA+AGG - chr2_1:11612249-11612268 None:intergenic 20.0%
!!! TAGTATATATTGTTTTGAGA+TGG + chr2_1:11612255-11612274 Msa0195000:three_prime_UTR 20.0%
!! TATCTTACAAATATATAACC+AGG - chr2_1:11612580-11612599 None:intergenic 20.0%
! GCAAATAGTACACAAAAAAA+GGG - chr2_1:11604504-11604523 None:intergenic 25.0%
! TGCAAATAGTACACAAAAAA+AGG - chr2_1:11604505-11604524 None:intergenic 25.0%
! CAAATGCGAAAAAAAAAAAG+TGG - chr2_1:11604712-11604731 None:intergenic 25.0%
!!! GTTTGTGTTTTTTGAATAAC+AGG + chr2_1:11604797-11604816 Msa0195000:intron 25.0%
! TATATCACAGATTCTTACAA+TGG - chr2_1:11605030-11605049 None:intergenic 25.0%
! ACTAAGCTGTTTATTCAAAT+GGG - chr2_1:11605090-11605109 None:intergenic 25.0%
! AACTAAGCTGTTTATTCAAA+TGG - chr2_1:11605091-11605110 None:intergenic 25.0%
! AAGAAGTTGAAAATAGCTTA+AGG + chr2_1:11605244-11605263 Msa0195000:intron 25.0%
! AGATTATGGAAACAACTTAT+GGG - chr2_1:11605274-11605293 None:intergenic 25.0%
!! TTATGTTAGTAGATTAGTTG+CGG + chr2_1:11605342-11605361 Msa0195000:intron 25.0%
!! ATAAGTTGAAAGTAACTTAC+GGG + chr2_1:11605428-11605447 Msa0195000:intron 25.0%
! ATCAGTTATCAATGAAAATG+AGG + chr2_1:11605741-11605760 Msa0195000:CDS 25.0%
!! TATTTTGTCAGTTTTCACTA+TGG + chr2_1:11606402-11606421 Msa0195000:intron 25.0%
!!! TTGCTTTTTATCCAGAATTT+TGG + chr2_1:11607215-11607234 Msa0195000:intron 25.0%
! AATCCTTGAGAAATAACAAA+AGG + chr2_1:11607533-11607552 Msa0195000:intron 25.0%
! ATTTCAATGATTTCATGGTA+TGG + chr2_1:11607601-11607620 Msa0195000:intron 25.0%
! TGACAATTAATGAGATTAGT+GGG - chr2_1:11607954-11607973 None:intergenic 25.0%
! TTGACAATTAATGAGATTAG+TGG - chr2_1:11607955-11607974 None:intergenic 25.0%
!!! TTCTTTTTTCTTGGTTGTTT+TGG + chr2_1:11608025-11608044 Msa0195000:intron 25.0%
!!! TCTTTTTTCTTGGTTGTTTT+GGG + chr2_1:11608026-11608045 Msa0195000:intron 25.0%
! ATACGTTATAGATATACCTA+AGG - chr2_1:11608572-11608591 None:intergenic 25.0%
! TATTCAGTAAAGAATCTGTT+TGG - chr2_1:11608657-11608676 None:intergenic 25.0%
! TAATATATGTGAGAACAATG+GGG - chr2_1:11608942-11608961 None:intergenic 25.0%
! GAGATATAAACAATCATTCT+AGG + chr2_1:11609014-11609033 Msa0195000:intron 25.0%
! AAGATAATGACCATAAAAAC+AGG + chr2_1:11609310-11609329 Msa0195000:intron 25.0%
! ATCTCATCAAATGATTACAA+AGG + chr2_1:11609509-11609528 Msa0195000:CDS 25.0%
! TGAGATATTACATTGTACAT+GGG + chr2_1:11609532-11609551 Msa0195000:intron 25.0%
! TTGTATGATTAAATGTGTGA+TGG + chr2_1:11609556-11609575 Msa0195000:intron 25.0%
! ACTTTAGATGTGAGAAAAAT+TGG - chr2_1:11609639-11609658 None:intergenic 25.0%
! CAAAAGGATGCTTATAAAAA+AGG - chr2_1:11610032-11610051 None:intergenic 25.0%
!! TTCAAAAAGTACATTGAAAG+AGG + chr2_1:11610101-11610120 Msa0195000:intron 25.0%
!! TCTTTCGTGCAATTAATTTT+TGG - chr2_1:11610140-11610159 None:intergenic 25.0%
! CATGTTAAATGAACAATTTG+AGG - chr2_1:11610229-11610248 None:intergenic 25.0%
! CTGATGTATATTGTAAATGA+AGG + chr2_1:11610255-11610274 Msa0195000:intron 25.0%
! TATTATTGGAAAGAATGAAG+AGG + chr2_1:11610285-11610304 Msa0195000:CDS 25.0%
!! TACCTTTTCAAAATTCGTAA+TGG - chr2_1:11610311-11610330 None:intergenic 25.0%
! TTATGTAATTTGGCAATTAC+AGG + chr2_1:11610389-11610408 Msa0195000:intron 25.0%
! TCCATACATCATAACATATA+TGG + chr2_1:11610425-11610444 Msa0195000:CDS 25.0%
! TCCATATATGTTATGATGTA+TGG - chr2_1:11610429-11610448 None:intergenic 25.0%
! ATGATATAATTCAATCCATC+CGG - chr2_1:11610635-11610654 None:intergenic 25.0%
!! TGACAAGTTGAGTTTATTTA+GGG + chr2_1:11610834-11610853 Msa0195000:intron 25.0%
!! AACTTTTGCATTTCCATAAT+TGG - chr2_1:11611053-11611072 None:intergenic 25.0%
!!! GAATCTCATTTTTCTTTTTC+AGG + chr2_1:11611088-11611107 Msa0195000:intron 25.0%
!!! TCATTTTTCTTTTTCAGGTT+TGG + chr2_1:11611093-11611112 Msa0195000:intron 25.0%
!!! TTTTATGACAAAGTATCTTC+AGG + chr2_1:11611270-11611289 Msa0195000:intron 25.0%
! ACTTAATGCATTCATCATAT+AGG + chr2_1:11611321-11611340 Msa0195000:intron 25.0%
!! TATTTTATAACTCCACCTTT+GGG - chr2_1:11611630-11611649 None:intergenic 25.0%
!!! TTATTTTATAACTCCACCTT+TGG - chr2_1:11611631-11611650 None:intergenic 25.0%
! TTAATTTCGCATCACTTATA+TGG + chr2_1:11611652-11611671 Msa0195000:intron 25.0%
! TGCTATGATATTTATATCTC+CGG - chr2_1:11611696-11611715 None:intergenic 25.0%
! TTGACATTTATTATGATGAC+AGG + chr2_1:11611855-11611874 Msa0195000:intron 25.0%
! TATATGAAAGAATAGATGCA+CGG + chr2_1:11612022-11612041 Msa0195000:intron 25.0%
! GATATATGTTAACCAATGTT+TGG + chr2_1:11612596-11612615 Msa0195000:three_prime_UTR 25.0%
TTTGTTGAAGAATCACTTTC+CGG + chr2_1:11604538-11604557 Msa0195000:five_prime_UTR 30.0%
!!! AAATAGGTTTTGAACTTACG+AGG - chr2_1:11604673-11604692 None:intergenic 30.0%
!!! TGAAGTTATTTTTTGTGTGC+AGG + chr2_1:11604959-11604978 Msa0195000:intron 30.0%
GAGATTATGGAAACAACTTA+TGG - chr2_1:11605275-11605294 None:intergenic 30.0%
!! CTTTCTTTTGATTATGCAGT+TGG + chr2_1:11605377-11605396 Msa0195000:intron 30.0%
CCTAGTAAACACAAAATCAA+TGG - chr2_1:11605537-11605556 None:intergenic 30.0%
!!! CCATTGATTTTGTGTTTACT+AGG + chr2_1:11605534-11605553 Msa0195000:intron 30.0%
! ATATGTGTGCTGTTCATAAA+CGG - chr2_1:11605617-11605636 None:intergenic 30.0%
! ATTGATAACTGATGTATTGC+AGG - chr2_1:11605734-11605753 None:intergenic 30.0%
CTAATTCATGATAGTTGGAT+TGG + chr2_1:11605783-11605802 Msa0195000:intron 30.0%
!! TGGTTTTTGCTGTAGTTTTA+AGG + chr2_1:11605803-11605822 Msa0195000:intron 30.0%
!!! GGTTTTTGCTGTAGTTTTAA+GGG + chr2_1:11605804-11605823 Msa0195000:intron 30.0%
AAACATCATAAACAACCTGT+AGG - chr2_1:11605839-11605858 None:intergenic 30.0%
AAAGAGATCAGAGAACAAAA+AGG - chr2_1:11605862-11605881 None:intergenic 30.0%
CAAGTTGTTTATCCAAGTAA+GGG - chr2_1:11605992-11606011 None:intergenic 30.0%
! TCAAGTTGTTTATCCAAGTA+AGG - chr2_1:11605993-11606012 None:intergenic 30.0%
CAAGTTATCTTGAGAATGTT+TGG + chr2_1:11606120-11606139 Msa0195000:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG + chr2_1:11606144-11606163 Msa0195000:intron 30.0%
ACTAAACACTCTTGAATCTA+AGG - chr2_1:11606248-11606267 None:intergenic 30.0%
!! AATGCTGATTCCAATGTATA+TGG + chr2_1:11606334-11606353 Msa0195000:intron 30.0%
!! ATGCTGATTCCAATGTATAT+GGG + chr2_1:11606335-11606354 Msa0195000:intron 30.0%
ATACAGAGTACAGTCATTTA+AGG - chr2_1:11606383-11606402 None:intergenic 30.0%
!! TTGCCGATGAATTTGTTATT+AGG + chr2_1:11606551-11606570 Msa0195000:CDS 30.0%
CTATTTACAAAGAATGCCTA+AGG + chr2_1:11606615-11606634 Msa0195000:CDS 30.0%
! AGGTTTAAGATGATATGTCT+AGG - chr2_1:11606848-11606867 None:intergenic 30.0%
TGATAGCCTCAAGTATAAAA+GGG - chr2_1:11607052-11607071 None:intergenic 30.0%
TACAAATCGATCCAAAATTC+TGG - chr2_1:11607229-11607248 None:intergenic 30.0%
ATGCTCTCCAAGAATATAAT+TGG + chr2_1:11607274-11607293 Msa0195000:intron 30.0%
TTGTGCACCAATTATATTCT+TGG - chr2_1:11607284-11607303 None:intergenic 30.0%
! TATTTGGAGTCTGAAATTTG+AGG - chr2_1:11607308-11607327 None:intergenic 30.0%
!! TTTTGCTTGTTACGACAAAT+TGG + chr2_1:11607451-11607470 Msa0195000:intron 30.0%
!!! TCACCTTTTGTTATTTCTCA+AGG - chr2_1:11607539-11607558 None:intergenic 30.0%
GGACTATTTCAATGATTTCA+TGG + chr2_1:11607596-11607615 Msa0195000:intron 30.0%
! TCGTTTTGCTTCTTTTTTCT+TGG + chr2_1:11608016-11608035 Msa0195000:intron 30.0%
CTATACTTCAAAGTTCTATG+TGG + chr2_1:11608059-11608078 Msa0195000:intron 30.0%
TTCAAAGTTCTATGTGGATT+TGG + chr2_1:11608065-11608084 Msa0195000:intron 30.0%
CATGAATTTGTAAGATTGGT+AGG + chr2_1:11608464-11608483 Msa0195000:intron 30.0%
AATATATGTGAGAACAATGG+GGG - chr2_1:11608941-11608960 None:intergenic 30.0%
!! CTTAAAACCTTCAAGTTGAA+AGG + chr2_1:11608968-11608987 Msa0195000:intron 30.0%
TAAACAGCCTAAAAACTGTT+AGG + chr2_1:11609044-11609063 Msa0195000:intron 30.0%
! AGACTATCCTAACAGTTTTT+AGG - chr2_1:11609054-11609073 None:intergenic 30.0%
AATGTCAATTGAACGCTTAA+AGG - chr2_1:11609158-11609177 None:intergenic 30.0%
!!! TTTTTCCATGCCTGTTTTTA+TGG - chr2_1:11609323-11609342 None:intergenic 30.0%
GTGAGATATTACATTGTACA+TGG + chr2_1:11609531-11609550 Msa0195000:intron 30.0%
GAGATATTACATTGTACATG+GGG + chr2_1:11609533-11609552 Msa0195000:intron 30.0%
! TTGCTAAAACATCTTTTCGA+TGG + chr2_1:11609594-11609613 Msa0195000:intron 30.0%
!! GTGAGAAAAATTGGTCTTAA+GGG - chr2_1:11609630-11609649 None:intergenic 30.0%
!! TGTGAGAAAAATTGGTCTTA+AGG - chr2_1:11609631-11609650 None:intergenic 30.0%
TTGATCAAAACAAGAGAACA+AGG - chr2_1:11609719-11609738 None:intergenic 30.0%
! TTTGACTTTGTTTCCTATTC+TGG + chr2_1:11609839-11609858 Msa0195000:intron 30.0%
CTTAATACTTGAGATTGCAA+AGG + chr2_1:11609917-11609936 Msa0195000:CDS 30.0%
! CACTCTTTTGTACTTACAAA+AGG - chr2_1:11610048-11610067 None:intergenic 30.0%
CTTATTAAAAGAGACAGAGA+TGG + chr2_1:11610068-11610087 Msa0195000:intron 30.0%
ATGAAGGTTGAAGCTATTAT+TGG + chr2_1:11610271-11610290 Msa0195000:intron 30.0%
ACATAACAAATAAGCAGGAT+GGG - chr2_1:11610375-11610394 None:intergenic 30.0%
TACATAACAAATAAGCAGGA+TGG - chr2_1:11610376-11610395 None:intergenic 30.0%
TAGTATTATTTAATGCCGGA+TGG + chr2_1:11610617-11610636 Msa0195000:intron 30.0%
! CTGACAAGTTGAGTTTATTT+AGG + chr2_1:11610833-11610852 Msa0195000:intron 30.0%
TATATCAGGTCTCAATTCTT+GGG - chr2_1:11610916-11610935 None:intergenic 30.0%
! TACCAAGGTTTATCTTTTAC+TGG + chr2_1:11610942-11610961 Msa0195000:intron 30.0%
ATCCAGTAAAAGATAAACCT+TGG - chr2_1:11610947-11610966 None:intergenic 30.0%
AAAAACATGAATAGTGTTGC+AGG - chr2_1:11611002-11611021 None:intergenic 30.0%
! AGGTTTGGTTCATACATATT+TGG + chr2_1:11611108-11611127 Msa0195000:intron 30.0%
!! GCAAAGGCTTTAAAATTAGT+AGG + chr2_1:11611196-11611215 Msa0195000:CDS 30.0%
TCATTCTGTAAACATCTGTT+GGG + chr2_1:11611583-11611602 Msa0195000:intron 30.0%
! ATTTTATAACTCCACCTTTG+GGG - chr2_1:11611629-11611648 None:intergenic 30.0%
! GATTTTGCGATTTTATATCC+CGG + chr2_1:11611674-11611693 Msa0195000:intron 30.0%
GCTATGATATTTATATCTCC+GGG - chr2_1:11611695-11611714 None:intergenic 30.0%
TATAAATATCATAGCAACGG+TGG + chr2_1:11611700-11611719 Msa0195000:intron 30.0%
ATAAAAGGATTGAGAGAAAG+GGG - chr2_1:11611741-11611760 None:intergenic 30.0%
CATAAAAGGATTGAGAGAAA+GGG - chr2_1:11611742-11611761 None:intergenic 30.0%
ATGAAAAATCACAAACACAG+AGG - chr2_1:11611831-11611850 None:intergenic 30.0%
! TTGTGATTTTGTATCTGTTC+AGG + chr2_1:11612107-11612126 Msa0195000:intron 30.0%
! TGTGATTTTGTATCTGTTCA+GGG + chr2_1:11612108-11612127 Msa0195000:intron 30.0%
AGAGTTCACATCTAAAAACA+AGG + chr2_1:11612350-11612369 Msa0195000:three_prime_UTR 30.0%
CATGCATTCCATGTTTAATA+CGG - chr2_1:11612409-11612428 None:intergenic 30.0%
ATTCTCATATATTGAGTGAG+TGG + chr2_1:11612443-11612462 Msa0195000:three_prime_UTR 30.0%
ATATATTGAGTGAGTGGTTT+GGG + chr2_1:11612449-11612468 Msa0195000:three_prime_UTR 30.0%
ATGTATTATTAAGCTCAAGC+TGG + chr2_1:11612516-11612535 Msa0195000:three_prime_UTR 30.0%
! CAATACTCTCTTCGTTTTGA+CGG - chr2_1:11604444-11604463 None:intergenic 35.0%
!! AAAGCGCTTTTGAAGAAGAA+TGG + chr2_1:11604586-11604605 Msa0195000:exon 35.0%
! TTTTGAACTTACGAGGATCT+GGG - chr2_1:11604666-11604685 None:intergenic 35.0%
! ATACCAAGCTTTCAGTTTTG+AGG - chr2_1:11604872-11604891 None:intergenic 35.0%
ACAACTTATGGGAGAGATTA+TGG - chr2_1:11605288-11605307 None:intergenic 35.0%
CAGTTGGAAACAATGTTAGT+AGG + chr2_1:11605393-11605412 Msa0195000:intron 35.0%
AGACTGTTTGTGAGAGTTTA+TGG - chr2_1:11605460-11605479 None:intergenic 35.0%
GGAGTTCATTATCGTCAAAT+AGG + chr2_1:11605692-11605711 Msa0195000:CDS 35.0%
ACTGATGTATTGCAGGAATT+CGG - chr2_1:11605727-11605746 None:intergenic 35.0%
TGTTCTCTGATCTCTTTAAC+AGG + chr2_1:11605865-11605884 Msa0195000:intron 35.0%
! TCCACTCCTCTTTTATAGTT+TGG + chr2_1:11605965-11605984 Msa0195000:intron 35.0%
TCCAAACTATAAAAGAGGAG+TGG - chr2_1:11605969-11605988 None:intergenic 35.0%
AAGGGTCCAAACTATAAAAG+AGG - chr2_1:11605974-11605993 None:intergenic 35.0%
TTATAGTTTGGACCCTTACT+TGG + chr2_1:11605977-11605996 Msa0195000:intron 35.0%
ACGAACACTTGTAAGAAAAG+CGG - chr2_1:11606035-11606054 None:intergenic 35.0%
!!! GTGGGTATATTTTGATGCAA+AGG + chr2_1:11606311-11606330 Msa0195000:intron 35.0%
!! TGCTGATTCCAATGTATATG+GGG + chr2_1:11606336-11606355 Msa0195000:intron 35.0%
!! TTTAAGGCCAATTTTCTCCA+TGG - chr2_1:11606367-11606386 None:intergenic 35.0%
CAGCATTTAAAGGAGAATGT+TGG - chr2_1:11606688-11606707 None:intergenic 35.0%
TTCTCCTTTAAATGCTGTCA+TGG + chr2_1:11606691-11606710 Msa0195000:intron 35.0%
GAATCCATGACAGCATTTAA+AGG - chr2_1:11606698-11606717 None:intergenic 35.0%
GTGTTATCAGTTCATTCATG+AGG - chr2_1:11606762-11606781 None:intergenic 35.0%
TTCAATGTTCGTCCATTCAA+CGG + chr2_1:11606802-11606821 Msa0195000:intron 35.0%
AAGTATAAAAGGGCAATGTC+TGG - chr2_1:11607042-11607061 None:intergenic 35.0%
! ACATTGCCCTTTTATACTTG+AGG + chr2_1:11607043-11607062 Msa0195000:CDS 35.0%
GTGATAGCCTCAAGTATAAA+AGG - chr2_1:11607053-11607072 None:intergenic 35.0%
TATCACCGCTTTATCAGAAA+TGG + chr2_1:11607067-11607086 Msa0195000:CDS 35.0%
ATCACCGCTTTATCAGAAAT+GGG + chr2_1:11607068-11607087 Msa0195000:CDS 35.0%
AGATCCCATTTCTGATAAAG+CGG - chr2_1:11607075-11607094 None:intergenic 35.0%
TCTACTGTTTATCAGCTTAG+AGG + chr2_1:11607427-11607446 Msa0195000:intron 35.0%
ATGTGGTATATATGCTATGC+TGG - chr2_1:11607511-11607530 None:intergenic 35.0%
AGCATAGCATATATACCACA+TGG + chr2_1:11607510-11607529 Msa0195000:intron 35.0%
TATTTCTCAAGGATTCCATG+TGG - chr2_1:11607528-11607547 None:intergenic 35.0%
GAAATAACAAAAGGTGACTG+CGG + chr2_1:11607542-11607561 Msa0195000:intron 35.0%
AAATAACAAAAGGTGACTGC+GGG + chr2_1:11607543-11607562 Msa0195000:intron 35.0%
! ATGAGATTAGTGGGTGTATT+GGG - chr2_1:11607945-11607964 None:intergenic 35.0%
! AATGAGATTAGTGGGTGTAT+TGG - chr2_1:11607946-11607965 None:intergenic 35.0%
! ATCTCGATTTTGTCTACCTT+AGG + chr2_1:11608553-11608572 Msa0195000:intron 35.0%
! AGCGAACAACTTAAGCTTTT+GGG + chr2_1:11608842-11608861 Msa0195000:intron 35.0%
AGTTCAAACTGTCAATCACT+CGG - chr2_1:11608905-11608924 None:intergenic 35.0%
GCAAAATCCTTTCAACTTGA+AGG - chr2_1:11608978-11608997 None:intergenic 35.0%
! AGTTGAAAGGATTTTGCATG+AGG + chr2_1:11608981-11609000 Msa0195000:intron 35.0%
TATTTCCACTGGTGTTTCTT+AGG + chr2_1:11609114-11609133 Msa0195000:intron 35.0%
AATGACCATAAAAACAGGCA+TGG + chr2_1:11609315-11609334 Msa0195000:intron 35.0%
ATTTGGCATCATCTGTTTCA+TGG + chr2_1:11609389-11609408 Msa0195000:intron 35.0%
CAGAATTTGCCAAGTTTCAA+GGG - chr2_1:11609440-11609459 None:intergenic 35.0%
TCAGAATTTGCCAAGTTTCA+AGG - chr2_1:11609441-11609460 None:intergenic 35.0%
GCTTATAAAAAAGGGATGGA+GGG - chr2_1:11610023-11610042 None:intergenic 35.0%
TGCTTATAAAAAAGGGATGG+AGG - chr2_1:11610024-11610043 None:intergenic 35.0%
GGATGCTTATAAAAAAGGGA+TGG - chr2_1:11610027-11610046 None:intergenic 35.0%
!! GGCCATTACGAATTTTGAAA+AGG + chr2_1:11610306-11610325 Msa0195000:CDS 35.0%
!! TTGTGGCTCTATCTGTTTTA+TGG + chr2_1:11610547-11610566 Msa0195000:CDS 35.0%
!! TGTGGCTCTATCTGTTTTAT+GGG + chr2_1:11610548-11610567 Msa0195000:CDS 35.0%
! CTCTATCTGTTTTATGGGAA+AGG + chr2_1:11610553-11610572 Msa0195000:CDS 35.0%
ATTATTGACAATGAAACGGC+CGG + chr2_1:11610863-11610882 Msa0195000:CDS 35.0%
GTATATCAGGTCTCAATTCT+TGG - chr2_1:11610917-11610936 None:intergenic 35.0%
! TTTAAAGCCTTTGCAGATTG+AGG - chr2_1:11611190-11611209 None:intergenic 35.0%
TTGAGCGATATCTTAAAGAC+TGG + chr2_1:11611458-11611477 Msa0195000:CDS 35.0%
TGAGCGATATCTTAAAGACT+GGG + chr2_1:11611459-11611478 Msa0195000:CDS 35.0%
CTCATTCTGTAAACATCTGT+TGG + chr2_1:11611582-11611601 Msa0195000:intron 35.0%
! TTTTATAACTCCACCTTTGG+GGG - chr2_1:11611628-11611647 None:intergenic 35.0%
GCATAAAAGGATTGAGAGAA+AGG - chr2_1:11611743-11611762 None:intergenic 35.0%
GAGGAAGTTTACTGCATAAA+AGG - chr2_1:11611756-11611775 None:intergenic 35.0%
AAAGAATAGATGCACGGTTT+AGG + chr2_1:11612028-11612047 Msa0195000:intron 35.0%
TCATTGTCTTCATCTTCTTC+AGG - chr2_1:11612150-11612169 None:intergenic 35.0%
GAAGACAATGATGTTGAAGA+TGG + chr2_1:11612159-11612178 Msa0195000:CDS 35.0%
AATGATGTTGAAGATGGTGA+TGG + chr2_1:11612165-11612184 Msa0195000:CDS 35.0%
GACTGAACTTCTATGAGTAT+TGG + chr2_1:11612200-11612219 Msa0195000:exon 35.0%
!! AGTATTGGTATCCAAACGAA+GGG + chr2_1:11612215-11612234 Msa0195000:exon 35.0%
TGAAATGAGAATTACCTTGG+TGG + chr2_1:11612292-11612311 Msa0195000:three_prime_UTR 35.0%
CGTATTAAACATGGAATGCA+TGG + chr2_1:11612407-11612426 Msa0195000:three_prime_UTR 35.0%
CATATATTGAGTGAGTGGTT+TGG + chr2_1:11612448-11612467 Msa0195000:three_prime_UTR 35.0%
TATTATTAAGCTCAAGCTGG+AGG + chr2_1:11612519-11612538 Msa0195000:three_prime_UTR 35.0%
!! TAAGATTATTTCTGTGCTCC+TGG + chr2_1:11612559-11612578 Msa0195000:three_prime_UTR 35.0%
CTAAACTTGTGACCAAACAT+TGG - chr2_1:11612611-11612630 None:intergenic 35.0%
! CTCTAAGAATCAACGTTCAC+CGG - chr2_1:11604560-11604579 None:intergenic 40.0%
AAGAAGAATGGAAGTTCCGA+AGG + chr2_1:11604598-11604617 Msa0195000:exon 40.0%
AGAGTGGTGATTTGATCCTT+CGG - chr2_1:11604617-11604636 None:intergenic 40.0%
ATCACCACTCTTCTCGAAAA+TGG + chr2_1:11604626-11604645 Msa0195000:CDS 40.0%
!! GTTTTGAACTTACGAGGATC+TGG - chr2_1:11604667-11604686 None:intergenic 40.0%
!!! AAGCTTTCAGTTTTGAGGTG+AGG - chr2_1:11604867-11604886 None:intergenic 40.0%
TCACCTCAAAACTGAAAGCT+TGG + chr2_1:11604866-11604885 Msa0195000:CDS 40.0%
AAACTGCTTGGGAGAGATTA+TGG - chr2_1:11605313-11605332 None:intergenic 40.0%
AAGCACTTACGAAACTGCTT+GGG - chr2_1:11605324-11605343 None:intergenic 40.0%
TAAGCACTTACGAAACTGCT+TGG - chr2_1:11605325-11605344 None:intergenic 40.0%
! CAAAATCAATGGAGCTTGCT+AGG - chr2_1:11605526-11605545 None:intergenic 40.0%
CTGAAAACAGCTTATGGACA+CGG + chr2_1:11606150-11606169 Msa0195000:intron 40.0%
GAACTTGTGAGACTGTTTGA+GGG - chr2_1:11606184-11606203 None:intergenic 40.0%
AGAACTTGTGAGACTGTTTG+AGG - chr2_1:11606185-11606204 None:intergenic 40.0%
! TCTTGAATCTAAGGTCTGTC+TGG - chr2_1:11606239-11606258 None:intergenic 40.0%
TGGACAATCCCCATATACAT+TGG - chr2_1:11606347-11606366 None:intergenic 40.0%
ATGTATATGGGGATTGTCCA+TGG + chr2_1:11606347-11606366 Msa0195000:intron 40.0%
GGATTGTCCATGGAGAAAAT+TGG + chr2_1:11606357-11606376 Msa0195000:intron 40.0%
TGTGACACAAACAACTCATG+AGG - chr2_1:11606495-11606514 None:intergenic 40.0%
TGTTTGTGTCACATCACAGA+TGG + chr2_1:11606502-11606521 Msa0195000:intron 40.0%
TCATTCATGAGGATGCTAGT+GGG - chr2_1:11606751-11606770 None:intergenic 40.0%
TTCATTCATGAGGATGCTAG+TGG - chr2_1:11606752-11606771 None:intergenic 40.0%
!! AAACATAAGGCACCGTTGAA+TGG - chr2_1:11606817-11606836 None:intergenic 40.0%
! TCAACGGTGCCTTATGTTTT+TGG + chr2_1:11606818-11606837 Msa0195000:intron 40.0%
CTAGGACAGCCAAAAACATA+AGG - chr2_1:11606830-11606849 None:intergenic 40.0%
TGACTGCTTGCTTTCACTTT+AGG + chr2_1:11606913-11606932 Msa0195000:intron 40.0%
CATCATTTCATTGTTTCCGC+AGG + chr2_1:11607106-11607125 Msa0195000:CDS 40.0%
CTGAATCAACAACAAACCTG+CGG - chr2_1:11607125-11607144 None:intergenic 40.0%
!! TTTGTTGTTGATTCAGCCCT+TGG + chr2_1:11607129-11607148 Msa0195000:intron 40.0%
! AGACTCCAAATAGAAGTGTG+AGG + chr2_1:11607316-11607335 Msa0195000:intron 40.0%
! GACTCCAAATAGAAGTGTGA+GGG + chr2_1:11607317-11607336 Msa0195000:intron 40.0%
CTTGAGTCAGTAGGATCAAA+TGG - chr2_1:11607345-11607364 None:intergenic 40.0%
AGGGTTACAAGATCGTGAAT+CGG - chr2_1:11608515-11608534 None:intergenic 40.0%
ACAAAATCGAGATCCTATGC+AGG - chr2_1:11608546-11608565 None:intergenic 40.0%
CGTATTGAGCTTGACAAGTT+TGG + chr2_1:11608587-11608606 Msa0195000:intron 40.0%
!! CTGCATCATGAAACTTGTTG+TGG + chr2_1:11608810-11608829 Msa0195000:intron 40.0%
! AAGCTTAAGTTGTTCGCTGT+AGG - chr2_1:11608840-11608859 None:intergenic 40.0%
! CAGCGAACAACTTAAGCTTT+TGG + chr2_1:11608841-11608860 Msa0195000:intron 40.0%
ACTCGTTGTGATATTTCCAC+TGG + chr2_1:11609103-11609122 Msa0195000:intron 40.0%
AATGTACACCAACATCTCCA+AGG + chr2_1:11609251-11609270 Msa0195000:intron 40.0%
ATGTACACCAACATCTCCAA+GGG + chr2_1:11609252-11609271 Msa0195000:intron 40.0%
! TAAATGTGTGATGGAGCTGT+AGG + chr2_1:11609565-11609584 Msa0195000:intron 40.0%
! ACTTTGTTTCCTATTCTGGC+AGG + chr2_1:11609843-11609862 Msa0195000:intron 40.0%
AGCATTATCGTATGCTGAAC+AGG + chr2_1:11610590-11610609 Msa0195000:CDS 40.0%
! AGAGTATTCGAATTGACGAG+AGG + chr2_1:11610697-11610716 Msa0195000:intron 40.0%
TATACCAGGGTACATAGTGA+AGG + chr2_1:11610722-11610741 Msa0195000:CDS 40.0%
ATTACCTTCACTATGTACCC+TGG - chr2_1:11610729-11610748 None:intergenic 40.0%
ACTTCGCGTTTACAGTAGAA+TGG - chr2_1:11611029-11611048 None:intergenic 40.0%
! TAAACGCGAAGTGCCAATTA+TGG + chr2_1:11611037-11611056 Msa0195000:intron 40.0%
!!! GGCGCTTTTTAAGATCAAAG+AGG + chr2_1:11611129-11611148 Msa0195000:CDS 40.0%
! GGCTTTATATGCTTCTAGAG+AGG + chr2_1:11611150-11611169 Msa0195000:CDS 40.0%
TAATTCTGGTGGGAGAGAAA+AGG + chr2_1:11611234-11611253 Msa0195000:CDS 40.0%
AGTTCTATGAGTCTGCGTTA+AGG + chr2_1:11611350-11611369 Msa0195000:CDS 40.0%
TTTATAACTCCACCTTTGGG+GGG - chr2_1:11611627-11611646 None:intergenic 40.0%
! TCGATCGATTCTTAAATGCG+AGG - chr2_1:11611775-11611794 None:intergenic 40.0%
! AAACACAGAGGCATATCACA+TGG - chr2_1:11611819-11611838 None:intergenic 40.0%
GCGTTTAGAGAAGCAAATGA+AGG + chr2_1:11611916-11611935 Msa0195000:CDS 40.0%
!! GAGTATTGGTATCCAAACGA+AGG + chr2_1:11612214-11612233 Msa0195000:exon 40.0%
GGGTGAAATGAGAATTACCT+TGG + chr2_1:11612289-11612308 Msa0195000:three_prime_UTR 40.0%
ACAGTGAAAACCTTCCACAT+AGG - chr2_1:11612318-11612337 None:intergenic 40.0%
TCTGGTGACCGTATTAAACA+TGG + chr2_1:11612398-11612417 Msa0195000:three_prime_UTR 40.0%
CAGAATGTTGAAGTTCAAGC+TGG + chr2_1:11612482-11612501 Msa0195000:three_prime_UTR 40.0%
!! GAGTCCATTTTCGAGAAGAG+TGG - chr2_1:11604633-11604652 None:intergenic 45.0%
GAAGATTCAGCATTTGCAGC+AGG - chr2_1:11604843-11604862 None:intergenic 45.0%
!!! TTTTGTGTGCAGGTGCTACT+TGG + chr2_1:11604969-11604988 Msa0195000:intron 45.0%
CTCTTCGATACTCTCTTTCG+CGG - chr2_1:11605007-11605026 None:intergenic 45.0%
TCTCACAAGCGCTTATGTCT+CGG + chr2_1:11605477-11605496 Msa0195000:intron 45.0%
GCAGACGACATACTCTGTTT+GGG - chr2_1:11605670-11605689 None:intergenic 45.0%
AGCAGACGACATACTCTGTT+TGG - chr2_1:11605671-11605690 None:intergenic 45.0%
AACAGAGTATGTCGTCTGCT+CGG + chr2_1:11605671-11605690 Msa0195000:CDS 45.0%
TAAGGGTTTGCATGTCCTAC+AGG + chr2_1:11605821-11605840 Msa0195000:intron 45.0%
! GAACAAAGCAGCTCTAGTTG+AGG + chr2_1:11605928-11605947 Msa0195000:CDS 45.0%
TGTGTCACATCACAGATGGA+AGG + chr2_1:11606506-11606525 Msa0195000:intron 45.0%
GGCAAATTTCGAGCTTTGCT+TGG - chr2_1:11606536-11606555 None:intergenic 45.0%
CGCAGAATGAACCTTTGATG+TGG + chr2_1:11606660-11606679 Msa0195000:intron 45.0%
!! GAATGTTGGTGCCACATCAA+AGG - chr2_1:11606674-11606693 None:intergenic 45.0%
CATTCATGAGGATGCTAGTG+GGG - chr2_1:11606750-11606769 None:intergenic 45.0%
AGACCAACGGATCATATTGG+GGG - chr2_1:11607158-11607177 None:intergenic 45.0%
GAGACCAACGGATCATATTG+GGG - chr2_1:11607159-11607178 None:intergenic 45.0%
GGAGACCAACGGATCATATT+GGG - chr2_1:11607160-11607179 None:intergenic 45.0%
AGGAGACCAACGGATCATAT+TGG - chr2_1:11607161-11607180 None:intergenic 45.0%
!! ATCCTACTGACTCAAGTCGT+TGG + chr2_1:11607349-11607368 Msa0195000:CDS 45.0%
CTCCCATCAGATTACGATTC+CGG - chr2_1:11607703-11607722 None:intergenic 45.0%
GAATCGTAATCTGATGGGAG+CGG + chr2_1:11607703-11607722 Msa0195000:intron 45.0%
TGAATCGGAGGATCGTAACA+CGG - chr2_1:11608500-11608519 None:intergenic 45.0%
GTTACAAGATCGTGAATCGG+AGG - chr2_1:11608512-11608531 None:intergenic 45.0%
ATCGAGATCCTATGCAGGAT+CGG - chr2_1:11608541-11608560 None:intergenic 45.0%
GTACCAATTCTCTTGCCATG+CGG + chr2_1:11608693-11608712 Msa0195000:intron 45.0%
AACAAAGAACACCAACCGCA+TGG - chr2_1:11608711-11608730 None:intergenic 45.0%
TGTCAATCACTCGGTTAGAG+AGG - chr2_1:11608896-11608915 None:intergenic 45.0%
TTCGACCTAAGAAACACCAG+TGG - chr2_1:11609122-11609141 None:intergenic 45.0%
TGTACACCAACATCTCCAAG+GGG + chr2_1:11609253-11609272 Msa0195000:intron 45.0%
ATATAGAATGCATGCCCCCT+TGG - chr2_1:11609271-11609290 None:intergenic 45.0%
TTGTTTCCTATTCTGGCAGG+TGG + chr2_1:11609846-11609865 Msa0195000:intron 45.0%
TATTGATCCTGCAAGACCAG+AGG + chr2_1:11610521-11610540 Msa0195000:CDS 45.0%
!! ACAAAAACCTCTGGTCTTGC+AGG - chr2_1:11610531-11610550 None:intergenic 45.0%
! TGCAAGACCAGAGGTTTTTG+TGG + chr2_1:11610530-11610549 Msa0195000:CDS 45.0%
GATAGAGCCACAAAAACCTC+TGG - chr2_1:11610540-11610559 None:intergenic 45.0%
! ATTGACGAGAGGCATATACC+AGG + chr2_1:11610708-11610727 Msa0195000:CDS 45.0%
! TTGACGAGAGGCATATACCA+GGG + chr2_1:11610709-11610728 Msa0195000:CDS 45.0%
CAATTCTTGGGCTCCTCTAA+AGG - chr2_1:11610904-11610923 None:intergenic 45.0%
CCTTGGTATGTGCGTATATC+AGG - chr2_1:11610930-11610949 None:intergenic 45.0%
CCTGATATACGCACATACCA+AGG + chr2_1:11610927-11610946 Msa0195000:CDS 45.0%
AGCAATGCCTCAATCTGCAA+AGG + chr2_1:11611180-11611199 Msa0195000:CDS 45.0%
GATGTGCATGCCAGTAATTC+TGG + chr2_1:11611220-11611239 Msa0195000:CDS 45.0%
TGCATGCCAGTAATTCTGGT+GGG + chr2_1:11611224-11611243 Msa0195000:CDS 45.0%
TTCTCTCCCACCAGAATTAC+TGG - chr2_1:11611233-11611252 None:intergenic 45.0%
CATTTCGACCCTCGATAACA+TGG - chr2_1:11611420-11611439 None:intergenic 45.0%
CATGTTATCGAGGGTCGAAA+TGG + chr2_1:11611418-11611437 Msa0195000:CDS 45.0%
ATATCGCTCAAGCAGAGACA+CGG - chr2_1:11611449-11611468 None:intergenic 45.0%
TGCTGCCACAAATATGCTGT+CGG + chr2_1:11611519-11611538 Msa0195000:CDS 45.0%
AGCTTCCGACAGCATATTTG+TGG - chr2_1:11611527-11611546 None:intergenic 45.0%
! GGAAGCTTTGTCGCATTATC+AGG + chr2_1:11611540-11611559 Msa0195000:CDS 45.0%
CGCATTATCAGGCTGCATTA+AGG + chr2_1:11611551-11611570 Msa0195000:CDS 45.0%
! TTATAACTCCACCTTTGGGG+GGG - chr2_1:11611626-11611645 None:intergenic 45.0%
TGGATATCCCCTGACTACAA+GGG - chr2_1:11611799-11611818 None:intergenic 45.0%
ATGGATATCCCCTGACTACA+AGG - chr2_1:11611800-11611819 None:intergenic 45.0%
!! GTTTTGCTGCTTCATTCTGG+GGG - chr2_1:11611886-11611905 None:intergenic 45.0%
!! CGTTTTGCTGCTTCATTCTG+GGG - chr2_1:11611887-11611906 None:intergenic 45.0%
!! CCGTTTTGCTGCTTCATTCT+GGG - chr2_1:11611888-11611907 None:intergenic 45.0%
CCCAGAATGAAGCAGCAAAA+CGG + chr2_1:11611885-11611904 Msa0195000:CDS 45.0%
CCAGAATGAAGCAGCAAAAC+GGG + chr2_1:11611886-11611905 Msa0195000:CDS 45.0%
CAGAATGAAGCAGCAAAACG+GGG + chr2_1:11611887-11611906 Msa0195000:CDS 45.0%
TCATCTTCTTCAGGTGCATC+AGG - chr2_1:11612141-11612160 None:intergenic 45.0%
!! AGGGTACTTTTCCCTTCGTT+TGG - chr2_1:11612229-11612248 None:intergenic 45.0%
!! AACGAAGGGAAAAGTACCCT+TGG + chr2_1:11612229-11612248 Msa0195000:three_prime_UTR 45.0%
! TTTGAGATGGCCTTAGCAGT+AGG + chr2_1:11612268-11612287 Msa0195000:three_prime_UTR 45.0%
! TTGAGATGGCCTTAGCAGTA+GGG + chr2_1:11612269-11612288 Msa0195000:three_prime_UTR 45.0%
CTCATTTCACCCTACTGCTA+AGG - chr2_1:11612281-11612300 None:intergenic 45.0%
! AATTACCTTGGTGGCCTATG+TGG + chr2_1:11612301-11612320 Msa0195000:three_prime_UTR 45.0%
TTATCGCCAACTGTTGCATC+TGG + chr2_1:11612380-11612399 Msa0195000:three_prime_UTR 45.0%
! ATTGAGTGAGTGGTTTGGGT+TGG + chr2_1:11612453-11612472 Msa0195000:three_prime_UTR 45.0%
!! ATTTATTATTAAATTACTAT+TGG + chr2_1:11606986-11607005 Msa0195000:intron 5.0%
!! TTAAAAATAAATTATATAAG+TGG - chr2_1:11608309-11608328 None:intergenic 5.0%
!!! TTATTTTTAATTTTTTTTTG+AGG + chr2_1:11608319-11608338 Msa0195000:intron 5.0%
!!! TATTTTTAATTTTTTTTTGA+GGG + chr2_1:11608320-11608339 Msa0195000:intron 5.0%
AACAGCAGCTCGACTATGTC+TGG - chr2_1:11606594-11606613 None:intergenic 50.0%
ATCATATTGGGGGTGGCCAA+GGG - chr2_1:11607148-11607167 None:intergenic 50.0%
CCAATTCGCTAGGAGACCAA+CGG - chr2_1:11607171-11607190 None:intergenic 50.0%
! CGTTGGTCTCCTAGCGAATT+GGG + chr2_1:11607169-11607188 Msa0195000:intron 50.0%
! GTTGGTCTCCTAGCGAATTG+GGG + chr2_1:11607170-11607189 Msa0195000:intron 50.0%
TTGGTCTCCTAGCGAATTGG+GGG + chr2_1:11607171-11607190 Msa0195000:intron 50.0%
CTAAAAGCCCCCAATTCGCT+AGG - chr2_1:11607181-11607200 None:intergenic 50.0%
GGAGCCCTCACACTTCTATT+TGG - chr2_1:11607324-11607343 None:intergenic 50.0%
AGCCAACGACTTGAGTCAGT+AGG - chr2_1:11607354-11607373 None:intergenic 50.0%
AGAATCGCGATCCAACTCGT+AGG + chr2_1:11607629-11607648 Msa0195000:intron 50.0%
ACTCGTACGATCCTACGAGT+TGG - chr2_1:11607643-11607662 None:intergenic 50.0%
TCGCCGGAATCGTAATCTGA+TGG + chr2_1:11607697-11607716 Msa0195000:intron 50.0%
CGCCGGAATCGTAATCTGAT+GGG + chr2_1:11607698-11607717 Msa0195000:intron 50.0%
GTGCGCCTTCCTCAAAATTC+CGG + chr2_1:11607791-11607810 Msa0195000:intron 50.0%
TGCGCCTTCCTCAAAATTCC+GGG + chr2_1:11607792-11607811 Msa0195000:intron 50.0%
!! CGAACCCGGAATTTTGAGGA+AGG - chr2_1:11607799-11607818 None:intergenic 50.0%
TCCTCAAAATTCCGGGTTCG+TGG + chr2_1:11607799-11607818 Msa0195000:intron 50.0%
CCTCAAAATTCCGGGTTCGT+GGG + chr2_1:11607800-11607819 Msa0195000:intron 50.0%
AAAATTCCGGGTTCGTGGGT+CGG + chr2_1:11607804-11607823 Msa0195000:intron 50.0%
TCGAGATCCTATGCAGGATC+GGG - chr2_1:11608540-11608559 None:intergenic 50.0%
CAACCGCATGGCAAGAGAAT+TGG - chr2_1:11608699-11608718 None:intergenic 50.0%
CAATTCTCTTGCCATGCGGT+TGG + chr2_1:11608697-11608716 Msa0195000:intron 50.0%
TGAGAACAATGGGGGAAGCA+AGG - chr2_1:11608933-11608952 None:intergenic 50.0%
GTACACCAACATCTCCAAGG+GGG + chr2_1:11609254-11609273 Msa0195000:intron 50.0%
!! AACGTAGCGCTGGCAAGTAA+AGG - chr2_1:11609474-11609493 None:intergenic 50.0%
GTGCATGCCAGTAATTCTGG+TGG + chr2_1:11611223-11611242 Msa0195000:CDS 50.0%
CTATGAGTCTGCGTTAAGGC+TGG + chr2_1:11611354-11611373 Msa0195000:CDS 50.0%
GCTGAGCTCCATGTTATCGA+GGG + chr2_1:11611409-11611428 Msa0195000:CDS 50.0%
! TATAACTCCACCTTTGGGGG+GGG - chr2_1:11611625-11611644 None:intergenic 50.0%
TCGATCGAACCCTTGTAGTC+AGG + chr2_1:11611787-11611806 Msa0195000:intron 50.0%
CGATCGAACCCTTGTAGTCA+GGG + chr2_1:11611788-11611807 Msa0195000:intron 50.0%
GATCGAACCCTTGTAGTCAG+GGG + chr2_1:11611789-11611808 Msa0195000:intron 50.0%
!! CCCGTTTTGCTGCTTCATTC+TGG - chr2_1:11611889-11611908 None:intergenic 50.0%
GATCATATTGGGGGTGGCCA+AGG - chr2_1:11607149-11607168 None:intergenic 55.0%
CCAACGGATCATATTGGGGG+TGG - chr2_1:11607155-11607174 None:intergenic 55.0%
CCACCCCCAATATGATCCGT+TGG + chr2_1:11607152-11607171 Msa0195000:intron 55.0%
! CCGTTGGTCTCCTAGCGAAT+TGG + chr2_1:11607168-11607187 Msa0195000:intron 55.0%
TTACGATTCCGGCGACGTTC+CGG - chr2_1:11607692-11607711 None:intergenic 55.0%
CGTAATCTGATGGGAGCGGT+CGG + chr2_1:11607707-11607726 Msa0195000:intron 55.0%
AGCGGTGGAATCGAGGGTTT+CGG + chr2_1:11607752-11607771 Msa0195000:intron 55.0%
! CCCACGAACCCGGAATTTTG+AGG - chr2_1:11607803-11607822 None:intergenic 55.0%
AAATTCCGGGTTCGTGGGTC+GGG + chr2_1:11607805-11607824 Msa0195000:intron 55.0%
TCCTATGCAGGATCGGGGAA+GGG - chr2_1:11608534-11608553 None:intergenic 55.0%
ATCCTATGCAGGATCGGGGA+AGG - chr2_1:11608535-11608554 None:intergenic 55.0%
CGAGATCCTATGCAGGATCG+GGG - chr2_1:11608539-11608558 None:intergenic 55.0%
ACTGAGCTTCAACGTAGCGC+TGG - chr2_1:11609484-11609503 None:intergenic 55.0%
TCCTATTCTGGCAGGTGGCT+TGG + chr2_1:11609851-11609870 Msa0195000:intron 55.0%
TCCAAGCCACCTGCCAGAAT+AGG - chr2_1:11609855-11609874 None:intergenic 55.0%
AAGGCAGACACAGCTGCTTC+CGG - chr2_1:11610885-11610904 None:intergenic 55.0%
GCAGCTGTGTCTGCCTTTAG+AGG + chr2_1:11610888-11610907 Msa0195000:CDS 55.0%
TCTGCGTTAAGGCTGGAACC+TGG + chr2_1:11611361-11611380 Msa0195000:CDS 55.0%
AGGCTGGAACCTGGTTACCT+TGG + chr2_1:11611370-11611389 Msa0195000:CDS 55.0%
AGTGCAGCACCAAGGTAACC+AGG - chr2_1:11611382-11611401 None:intergenic 55.0%
CCAAAGCTAGTGCAGCACCA+AGG - chr2_1:11611390-11611409 None:intergenic 55.0%
!! CCTTGGTGCTGCACTAGCTT+TGG + chr2_1:11611387-11611406 Msa0195000:CDS 55.0%
GGCTGAGCTCCATGTTATCG+AGG + chr2_1:11611408-11611427 Msa0195000:CDS 55.0%
! ATAACTCCACCTTTGGGGGG+GGG - chr2_1:11611624-11611643 None:intergenic 55.0%
! ACCTTGGTGGCCTATGTGGA+AGG + chr2_1:11612305-11612324 Msa0195000:three_prime_UTR 55.0%
ACCTTCCACATAGGCCACCA+AGG - chr2_1:11612309-11612328 None:intergenic 55.0%
CGGTCACCAGATGCAACAGT+TGG - chr2_1:11612389-11612408 None:intergenic 55.0%
!! GTGAGTGGTTTGGGTTGGAC+TGG + chr2_1:11612458-11612477 Msa0195000:three_prime_UTR 55.0%
! ACCGCTTCCACGCGTTTTCG+CGG - chr2_1:11607738-11607757 None:intergenic 60.0%
CGTGGAAGCGGTGGAATCGA+GGG + chr2_1:11607746-11607765 Msa0195000:intron 60.0%
! GGGTTTCGGCCGATTCTGTG+CGG + chr2_1:11607766-11607785 Msa0195000:intron 60.0%
ACCCTTCCCCGATCCTGCAT+AGG + chr2_1:11608530-11608549 Msa0195000:intron 60.0%
GCATGCCCCCTTGGAGATGT+TGG - chr2_1:11609262-11609281 None:intergenic 60.0%
GGGGGGGGTAAAGTGCACTA+TGG - chr2_1:11611609-11611628 None:intergenic 60.0%
TGCACTTTACCCCCCCCCAA+AGG + chr2_1:11611612-11611631 Msa0195000:intron 60.0%
ACTTTACCCCCCCCCAAAGG+TGG + chr2_1:11611615-11611634 Msa0195000:intron 60.0%
ATTCCGGCGACGTTCCGGCA+CGG - chr2_1:11607687-11607706 None:intergenic 65.0%
GGAATCGCCGCGAAAACGCG+TGG + chr2_1:11607728-11607747 Msa0195000:intron 65.0%
GCCGCGAAAACGCGTGGAAG+CGG + chr2_1:11607734-11607753 Msa0195000:intron 65.0%
GCGAAAACGCGTGGAAGCGG+TGG + chr2_1:11607737-11607756 Msa0195000:intron 65.0%
GCGTGGAAGCGGTGGAATCG+AGG + chr2_1:11607745-11607764 Msa0195000:intron 65.0%
GGCGCACAGCCGCACAGAAT+CGG - chr2_1:11607778-11607797 None:intergenic 65.0%
CTCGCAACCCACCACCGTGC+CGG + chr2_1:11607670-11607689 Msa0195000:intron 70.0%
CGACGTTCCGGCACGGTGGT+GGG - chr2_1:11607680-11607699 None:intergenic 70.0%
GCGAACCCGACCCACGAACC+CGG - chr2_1:11607813-11607832 None:intergenic 70.0%
GCGACGTTCCGGCACGGTGG+TGG - chr2_1:11607681-11607700 None:intergenic 75.0%
CCACCGTGCCGGAACGTCGC+CGG + chr2_1:11607681-11607700 Msa0195000:intron 75.0%
CGTGGGTCGGGTTCGCGACC+CGG + chr2_1:11607817-11607836 Msa0195000:intron 75.0%
! CCGGCGACGTTCCGGCACGG+TGG - chr2_1:11607684-11607703 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 11604433 11612750 11604433 ID=Msa0195000;Name=Msa0195000
chr2_1 mRNA 11604433 11612750 11604433 ID=Msa0195000-mRNA-1;Parent=Msa0195000;Name=Msa0195000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=172|1|1|1|1|1|18|535|560
chr2_1 exon 11604433 11604673 11604433 ID=Msa0195000-mRNA-1:exon:5121;Parent=Msa0195000-mRNA-1
chr2_1 exon 11604819 11604887 11604819 ID=Msa0195000-mRNA-1:exon:5122;Parent=Msa0195000-mRNA-1
chr2_1 exon 11604981 11605031 11604981 ID=Msa0195000-mRNA-1:exon:5123;Parent=Msa0195000-mRNA-1
chr2_1 exon 11605628 11605762 11605628 ID=Msa0195000-mRNA-1:exon:5124;Parent=Msa0195000-mRNA-1
chr2_1 exon 11605887 11605949 11605887 ID=Msa0195000-mRNA-1:exon:5125;Parent=Msa0195000-mRNA-1
chr2_1 exon 11606521 11606636 11606521 ID=Msa0195000-mRNA-1:exon:5126;Parent=Msa0195000-mRNA-1
chr2_1 exon 11607043 11607127 11607043 ID=Msa0195000-mRNA-1:exon:5127;Parent=Msa0195000-mRNA-1
chr2_1 exon 11607318 11607377 11607318 ID=Msa0195000-mRNA-1:exon:5128;Parent=Msa0195000-mRNA-1
chr2_1 exon 11609485 11609530 11609485 ID=Msa0195000-mRNA-1:exon:5129;Parent=Msa0195000-mRNA-1
chr2_1 exon 11609865 11609938 11609865 ID=Msa0195000-mRNA-1:exon:5130;Parent=Msa0195000-mRNA-1
chr2_1 exon 11610277 11610327 11610277 ID=Msa0195000-mRNA-1:exon:5131;Parent=Msa0195000-mRNA-1
chr2_1 exon 11610411 11610611 11610411 ID=Msa0195000-mRNA-1:exon:5132;Parent=Msa0195000-mRNA-1
chr2_1 exon 11610699 11610743 11610699 ID=Msa0195000-mRNA-1:exon:5133;Parent=Msa0195000-mRNA-1
chr2_1 exon 11610855 11610948 11610855 ID=Msa0195000-mRNA-1:exon:5134;Parent=Msa0195000-mRNA-1
chr2_1 exon 11611110 11611255 11611110 ID=Msa0195000-mRNA-1:exon:5135;Parent=Msa0195000-mRNA-1
chr2_1 exon 11611343 11611572 11611343 ID=Msa0195000-mRNA-1:exon:5136;Parent=Msa0195000-mRNA-1
chr2_1 exon 11611877 11611937 11611877 ID=Msa0195000-mRNA-1:exon:5137;Parent=Msa0195000-mRNA-1
chr2_1 exon 11612129 11612750 11612129 ID=Msa0195000-mRNA-1:exon:5138;Parent=Msa0195000-mRNA-1
chr2_1 five_prime_UTR 11604433 11604604 11604433 ID=Msa0195000-mRNA-1:five_prime_utr;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11604605 11604673 11604605 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11604819 11604887 11604819 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11604981 11605031 11604981 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11605628 11605762 11605628 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11605887 11605949 11605887 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11606521 11606636 11606521 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11607043 11607127 11607043 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11607318 11607377 11607318 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11609485 11609530 11609485 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11609865 11609938 11609865 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11610277 11610327 11610277 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11610411 11610611 11610411 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11610699 11610743 11610699 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11610855 11610948 11610855 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11611110 11611255 11611110 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11611343 11611572 11611343 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11611877 11611937 11611877 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 CDS 11612129 11612215 11612129 ID=Msa0195000-mRNA-1:cds;Parent=Msa0195000-mRNA-1
chr2_1 three_prime_UTR 11612216 11612750 11612216 ID=Msa0195000-mRNA-1:three_prime_utr;Parent=Msa0195000-mRNA-1
Gene Sequence

>Msa0195000

ATGGAAGTTCCGAAGGATCAAATCACCACTCTTCTCGAAAATGGACTCTACAACTCTGCCCAGATCCTCGGTTGTTTTCTTGTTTCTTCACCTGCTGCAAATGCTGAATCTTCTCCTCACCTCAAAACTGAAAGCTTGGTGCTACTTGGTGATTCATTCTACCGCGAAAGAGAGTATCGAAGAGCCATTCACACATATAAACAAGCTTTACAATACTACAAGATGATTCCCAAACAGAGTATGTCGTCTGCTCGGAGTTCATTATCGTCAAATAGGTCTTCTTCTCCGAATTCCTGCAATACATCAGTTATCAATGAAAATGAGGTGAAGTTCAAAATTGCATCATGTCATTGTTTTCTAAATGAGAACAAAGCAGCTCTAGTTGAGATGGAAGGAATTCCAAGCAAAGCTCGAAATTTGCCGATGAATTTGTTATTAGGAAAGCTATATCGAATTTCCAGACATAGTCGAGCTGCTGTTGCTATTTACAAAGAATGCCTAAGACATTGCCCTTTTATACTTGAGGCTATCACCGCTTTATCAGAAATGGGATCTACTGCAAAAGACATCATTTCATTGTTTCCGCAGACTCCAAATAGAAGTGTGAGGGCTCCATTTGATCCTACTGACTCAAGTCGTTGGCTTCAACGCTACGTTGAAGCTCAGTGTTGCATCTCATCAAATGATTACAAAGGTGGCTTGGAACTATTTGCTGATCTTTTGCAGCGTTTCCCTAATAATACACACTTAATACTTGAGATTGCAAAGGTTGAAGCTATTATTGGAAAGAATGAAGAGGCCATTACGAATTTTGAAAAGGCTCGATCAATTGATCCATACATCATAACATATATGGATGAGTATGCAATGCTTCTAAAGCTAAAGTCTGATTATTCTAAGCTGAACAAGTTAGTGCATGATTTGTTGAATATTGATCCTGCAAGACCAGAGGTTTTTGTGGCTCTATCTGTTTTATGGGAAAGGAAAGATGAGAAAAGAGCATTATCGTATGCTGAACAGAGTATTCGAATTGACGAGAGGCATATACCAGGGTACATAGTGAAGGGAAATTTATTATTGACAATGAAACGGCCGGAAGCAGCTGTGTCTGCCTTTAGAGGAGCCCAAGAATTGAGACCTGATATACGCACATACCAAGGTTTGGTTCATACATATTTGGCGCTTTTTAAGATCAAAGAGGCTTTATATGCTTCTAGAGAGGCAATGAAAGCAATGCCTCAATCTGCAAAGGCTTTAAAATTAGTAGGTGATGTGCATGCCAGTAATTCTGGTGGGAGAGAAAAGGCGAAAAAGTTCTATGAGTCTGCGTTAAGGCTGGAACCTGGTTACCTTGGTGCTGCACTAGCTTTGGCTGAGCTCCATGTTATCGAGGGTCGAAATGGAGATGCCGTGTCTCTGCTTGAGCGATATCTTAAAGACTGGGCTGATGACTCTCTTCATGTGAAATTAGCACAAGTTTTTGCTGCCACAAATATGCTGTCGGAAGCTTTGTCGCATTATCAGGCTGCATTAAGGTTAAACCCCCAGAATGAAGCAGCAAAACGGGGTTTAGAGCGTTTAGAGAAGCAAATGAAGGGTGTTGATCCTGATGCACCTGAAGAAGATGAAGACAATGATGTTGAAGATGGTGATGGAGATCAAGACGAGACTGAACTTCTATGA

Protein sequence

>Msa0195000

MEVPKDQITTLLENGLYNSAQILGCFLVSSPAANAESSPHLKTESLVLLGDSFYREREYRRAIHTYKQALQYYKMIPKQSMSSARSSLSSNRSSSPNSCNTSVINENEVKFKIASCHCFLNENKAALVEMEGIPSKARNLPMNLLLGKLYRISRHSRAAVAIYKECLRHCPFILEAITALSEMGSTAKDIISLFPQTPNRSVRAPFDPTDSSRWLQRYVEAQCCISSNDYKGGLELFADLLQRFPNNTHLILEIAKVEAIIGKNEEAITNFEKARSIDPYIITYMDEYAMLLKLKSDYSKLNKLVHDLLNIDPARPEVFVALSVLWERKDEKRALSYAEQSIRIDERHIPGYIVKGNLLLTMKRPEAAVSAFRGAQELRPDIRTYQGLVHTYLALFKIKEALYASREAMKAMPQSAKALKLVGDVHASNSGGREKAKKFYESALRLEPGYLGAALALAELHVIEGRNGDAVSLLERYLKDWADDSLHVKLAQVFAATNMLSEALSHYQAALRLNPQNEAAKRGLERLEKQMKGVDPDAPEEDEDNDVEDGDGDQDETELL*