AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648880 MtrunA17_Chr4g0040511 95.331 257 12 0 1 257 304 560 9.68e-139 427
Msa0648880 MtrunA17_Chr2g0282771 53.755 253 114 1 8 257 331 583 9.85e-57 195
Msa0648880 MtrunA17_Chr4g0046591 53.390 236 102 2 22 257 303 530 3.93e-44 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648880 AT5G44180.2 55.319 282 95 4 4 257 249 527 2.44e-78 258
Msa0648880 AT5G44180.3 55.319 282 95 4 4 257 249 527 2.45e-78 258
Msa0648880 AT5G44180.1 55.319 282 95 4 4 257 249 527 2.45e-78 258
Msa0648880 AT1G28420.1 61.165 206 80 0 52 257 357 562 6.88e-51 179

Find 435 sgRNAs with CRISPR-Local

Find 1198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGTTCTGTTTGCTCTTC+TGG 0.116608 4_3:-55408167 Msa0648880:three_prime_UTR
CTGTAAATCTTGTTTGTATT+TGG 0.132516 4_3:-55406577 None:intergenic
AGATGCAGTGCTCCTCTTTC+TGG 0.173822 4_3:+55407472 None:intergenic
GCATAATCATCTCACCATTT+TGG 0.182341 4_3:+55409759 None:intergenic
GTCAATGACGACGGAAAATA+TGG 0.185129 4_3:-55407053 Msa0648880:three_prime_UTR
GTTCAATTTCTTAGGGTTTA+GGG 0.187350 4_3:-55422120 Msa0648880:five_prime_UTR
GGTTCAATTTCTTAGGGTTT+AGG 0.195000 4_3:-55422121 Msa0648880:five_prime_UTR
GTTGCTGGGTTCAATTTCTT+AGG 0.198006 4_3:-55422128 Msa0648880:five_prime_UTR
TGATATCTAACAAGAAATTT+TGG 0.212976 4_3:-55406610 Msa0648880:three_prime_UTR
GTCAACTCCGTGATATCTTT+TGG 0.216507 4_3:+55407311 None:intergenic
TTGCATGTTCACTTCTAATA+AGG 0.224638 4_3:+55410860 None:intergenic
GATTCGGAGATTGATGATTT+AGG 0.224782 4_3:-55411659 Msa0648880:three_prime_UTR
GTTGCTTCTACTGTAGATTT+TGG 0.231231 4_3:-55422150 Msa0648880:five_prime_UTR
TTCTGTTTGCATTGATGATT+TGG 0.233207 4_3:-55409648 Msa0648880:three_prime_UTR
TGTTGGATTGAATAATTATC+TGG 0.233871 4_3:+55410816 None:intergenic
ATGTGTGGTTGGTTAGATTT+TGG 0.235867 4_3:+55422342 None:intergenic
CATCTTATGCTTTCTGCTTC+AGG 0.243330 4_3:-55417018 Msa0648880:exon
ATAGAGAGAGAGGGATAGTT+AGG 0.247515 4_3:-55422296 Msa0648880:five_prime_UTR
TGGATCTCACCTAATATTCT+AGG 0.254132 4_3:+55413440 None:intergenic
ACGGTATGCTTAGTCTTAAT+TGG 0.262905 4_3:+55407620 None:intergenic
TTTGCATTGTCAGCTGGATT+TGG 0.267929 4_3:-55413122 Msa0648880:three_prime_UTR
AAACGATGTTTATGCCTTCT+TGG 0.270826 4_3:+55412122 None:intergenic
TCACCACCTATGATATCATT+AGG 0.285892 4_3:+55408137 None:intergenic
AATGCAGTCTTCCTCATGTT+TGG 0.290005 4_3:-55411042 Msa0648880:three_prime_UTR
CTGTACCTCTCTGTCCAAAA+AGG 0.290316 4_3:+55408469 None:intergenic
AAGATGCTTATATGAGATAT+TGG 0.292447 4_3:-55409565 Msa0648880:three_prime_UTR
AAAATCTCCGGCCATGTTAA+TGG 0.293830 4_3:+55413152 None:intergenic
GTTGCTAATCCTATTCTAAA+AGG 0.297191 4_3:-55411422 Msa0648880:three_prime_UTR
GTATTATCTGCAATGAAGTT+TGG 0.303578 4_3:-55409500 Msa0648880:three_prime_UTR
GGAAATTGCAGACAAGATTC+AGG 0.305802 4_3:-55412027 Msa0648880:intron
TTGATGGTGTTCCACATTCT+AGG 0.307589 4_3:-55417167 Msa0648880:five_prime_UTR
TAGATCATTGCCTCTTGGTT+TGG 0.309915 4_3:-55410715 Msa0648880:three_prime_UTR
AAAAGGTTGCAGAGCTTCTT+GGG 0.311913 4_3:+55408486 None:intergenic
AATGTGGAAGATTATATAAT+TGG 0.312562 4_3:-55407017 Msa0648880:three_prime_UTR
TCCTGTTCTATTAAGTTATC+AGG 0.313356 4_3:+55407122 None:intergenic
CAACACAGAGGCAGTTAAAA+TGG 0.316429 4_3:-55409711 Msa0648880:three_prime_UTR
GAACTACTACTATCCATTTC+AGG 0.318128 4_3:+55421568 None:intergenic
GCCACAGCAGCAGTTGTAAA+TGG 0.319400 4_3:+55408089 None:intergenic
TTGCATTGTCAGCTGGATTT+GGG 0.323083 4_3:-55413121 Msa0648880:three_prime_UTR
TGCTATAAAACGTGAGTATC+TGG 0.323766 4_3:-55408219 Msa0648880:three_prime_UTR
CAACTGCTGCTGTGGCTCTA+AGG 0.324070 4_3:-55408082 Msa0648880:three_prime_UTR
ATCCACTTTAGTTCTCTTGA+TGG 0.324676 4_3:-55417183 Msa0648880:five_prime_UTR
AGCTGTTACATTTCCATCAT+TGG 0.325526 4_3:-55411003 Msa0648880:three_prime_UTR
AAGAGCACCCCAGTTCTTTA+CGG 0.325588 4_3:+55407601 None:intergenic
TTACAGGACCCTAGAATATT+AGG 0.325838 4_3:-55413449 Msa0648880:intron
AGAGATGATGGACCTATTCT+TGG 0.335549 4_3:-55421472 Msa0648880:five_prime_UTR
AATTGGTCGTATGGACTTGC+TGG 0.337398 4_3:-55421644 Msa0648880:five_prime_UTR
AAATAATAAATAGTTGATTA+AGG 0.339705 4_3:+55422381 None:intergenic
GCATTTGTGGAAAGTCAGTT+AGG 0.344145 4_3:-55421505 Msa0648880:five_prime_UTR
GCAGCATATTTCACAGTTCC+AGG 0.346749 4_3:+55412095 None:intergenic
CTACGAAACTATGCAAAATC+TGG 0.347257 4_3:-55416150 Msa0648880:CDS
CAGAGTTCGTAACACTGTTT+TGG 0.348683 4_3:+55413342 None:intergenic
GTTAGAAGAAATGTCCAAAA+TGG 0.351762 4_3:-55409773 Msa0648880:three_prime_UTR
GCAAACACTGTCATGAGAAA+TGG 0.352210 4_3:-55411587 Msa0648880:three_prime_UTR
TGATGCTCTTTCGGTATCAT+TGG 0.352666 4_3:-55409867 Msa0648880:three_prime_UTR
GCTGTTACATTTCCATCATT+GGG 0.354683 4_3:-55411002 Msa0648880:three_prime_UTR
GAGAAAGTGGATGAGGGTTT+AGG 0.357013 4_3:-55411521 Msa0648880:three_prime_UTR
CGAAAGGCTGTGGCACCGGC+TGG 0.357757 4_3:-55421757 Msa0648880:five_prime_UTR
GGCACCGGCTGGGCCGAGTT+TGG 0.357974 4_3:-55421746 Msa0648880:five_prime_UTR
AGCTCAAACAAATACGAAAA+AGG 0.358007 4_3:-55411636 Msa0648880:three_prime_UTR
CCAGACGTTCATCTTCAATA+AGG 0.359310 4_3:+55416228 None:intergenic
TAGAAAAGAGCTTGTAAAAC+AGG 0.366670 4_3:-55416716 Msa0648880:CDS
GTGCAGATTCATTCCCGTTA+AGG 0.367475 4_3:+55417118 None:intergenic
TGTGCCGCTGCCTGAGGTGA+TGG 0.367619 4_3:-55421617 Msa0648880:five_prime_UTR
ACCAAGAAGGATAGTAAAAC+TGG 0.368155 4_3:-55408008 Msa0648880:three_prime_UTR
CTATAGCTTCTGCTTTGTCT+AGG 0.371152 4_3:-55411877 Msa0648880:three_prime_UTR
ATGCAGTCTTCCTCATGTTT+GGG 0.371403 4_3:-55411041 Msa0648880:three_prime_UTR
AAGCCGAGGCCTCAATATAT+TGG 0.375206 4_3:-55412048 Msa0648880:three_prime_UTR
GGTGCATTTGGTGCACCATT+AGG 0.375325 4_3:-55421424 Msa0648880:intron
CACCACCTATGATATCATTA+GGG 0.377379 4_3:+55408138 None:intergenic
GGTGAGATGATTATGCAAAA+AGG 0.379520 4_3:-55409752 Msa0648880:three_prime_UTR
GACTAGTACTGAAAGTTCTA+TGG 0.380612 4_3:+55409393 None:intergenic
CTGGAATAAATTGATATTCA+TGG 0.380939 4_3:+55417253 None:intergenic
CAGCTGCCAGGGAAAGAATC+AGG 0.381564 4_3:-55411763 Msa0648880:three_prime_UTR
GAGGTTGAACCAACTCTATC+TGG 0.383748 4_3:+55406951 None:intergenic
TATTATCTGCAATGAAGTTT+GGG 0.387896 4_3:-55409499 Msa0648880:three_prime_UTR
TGTTAGGAATGTTTGTGATT+TGG 0.388475 4_3:-55421683 Msa0648880:five_prime_UTR
CTCGGCTTCCTTCCAGAGCT+AGG 0.396174 4_3:+55412063 None:intergenic
GTGGGCCATCTTTCCTTAAC+GGG 0.396290 4_3:-55417131 Msa0648880:five_prime_UTR
ACTTTGTTGTCTTCCTCCAA+TGG 0.399522 4_3:+55422037 None:intergenic
AGATCACAAGGAATAGTTAC+TGG 0.400192 4_3:-55407509 Msa0648880:three_prime_UTR
TCTTTGCCGCTGGGTGCATT+TGG 0.401824 4_3:-55421436 Msa0648880:five_prime_UTR
AGAACACCCACTACTGGATT+AGG 0.401839 4_3:-55413371 Msa0648880:three_prime_UTR
TCATAAACTTCTGCCTCAAC+AGG 0.403016 4_3:+55417594 None:intergenic
AACTGGGGTGCTCTTGGTGC+TGG 0.405976 4_3:-55407593 Msa0648880:three_prime_UTR
GAAGGGGTTATCTTCAATAC+TGG 0.406063 4_3:-55416180 Msa0648880:CDS
ATCGAAGACGAAACCGATAC+TGG 0.407862 4_3:-55410692 Msa0648880:three_prime_UTR
ACTAGTGATCACATCTATCT+TGG 0.408874 4_3:+55407346 None:intergenic
GGCACTAGACGGCCGTCATT+AGG 0.410242 4_3:+55416916 None:intergenic
GAGGCGTGAGCAGGAGCAGC+GGG 0.411459 4_3:-55416475 Msa0648880:CDS
GCTGCAAGCTATTGCATTTG+TGG 0.413794 4_3:-55421518 Msa0648880:five_prime_UTR
TTGCTGGGTTCAATTTCTTA+GGG 0.414202 4_3:-55422127 Msa0648880:five_prime_UTR
CGGCAGTATATATAGATTGT+TGG 0.414752 4_3:+55410799 None:intergenic
TGGATCTCAGAAGAGCAATA+TGG 0.417612 4_3:+55413420 None:intergenic
GGGAGCTGCATTGCCTGAAA+TGG 0.418537 4_3:-55421581 Msa0648880:five_prime_UTR
CGACAATTTGCATTGTCAGC+TGG 0.419663 4_3:-55413128 Msa0648880:three_prime_UTR
GGAATTTGATTCTTTGCCGC+TGG 0.422515 4_3:-55421446 Msa0648880:five_prime_UTR
AAATATTAGCACTGCAATCT+AGG 0.423789 4_3:+55409681 None:intergenic
GAATATCCTGATTCTTTCCC+TGG 0.423792 4_3:+55411757 None:intergenic
GGCAGAAGTTTATGAAAGTC+TGG 0.423933 4_3:-55417586 Msa0648880:five_prime_UTR
ATAGGTCCATCATCTCTTAT+CGG 0.424044 4_3:+55421478 None:intergenic
TATACTGTCAGGCGTATGTA+TGG 0.424170 4_3:-55413211 Msa0648880:intron
AGATGCTTATATGAGATATT+GGG 0.425752 4_3:-55409564 Msa0648880:three_prime_UTR
GCCTGATAACTTAATAGAAC+AGG 0.429088 4_3:-55407123 Msa0648880:three_prime_UTR
CAAAGTCAAGATTGTTCTAC+TGG 0.430262 4_3:-55410840 Msa0648880:three_prime_UTR
GTTTCTGAATTGAGGCCAAT+TGG 0.430434 4_3:-55421661 Msa0648880:five_prime_UTR
AGAGTTGGTTCAACCTCATC+TGG 0.430524 4_3:-55406945 Msa0648880:three_prime_UTR
AGAAGACAATGCTAGAAATT+CGG 0.433424 4_3:-55407252 Msa0648880:three_prime_UTR
TCTTCTAACAGATTCTTTGA+AGG 0.433621 4_3:+55409787 None:intergenic
TTCACAACACCGTCCCTCAT+TGG 0.438229 4_3:+55421721 None:intergenic
GAAACTACGAATGAGCTGTT+AGG 0.439336 4_3:-55408185 Msa0648880:three_prime_UTR
TCAAGAGTTACATCGACAAA+TGG 0.440665 4_3:+55416967 None:intergenic
CAAACACTGTCATGAGAAAT+GGG 0.440902 4_3:-55411586 Msa0648880:three_prime_UTR
CTTGGTGAACCATGGGTGCA+TGG 0.442472 4_3:-55411377 Msa0648880:three_prime_UTR
TCATCAATGCAAACAGAAGT+AGG 0.444168 4_3:+55409653 None:intergenic
GTCTAGTGCCATTTGATAGT+AGG 0.446696 4_3:-55416903 Msa0648880:CDS
TTTCCAATATATTGAGGCCT+CGG 0.449107 4_3:+55412045 None:intergenic
AGATAGAAGCTACTGATGTT+AGG 0.449198 4_3:-55421699 Msa0648880:five_prime_UTR
AATAATAATGATAGATATCA+AGG 0.453044 4_3:-55407161 Msa0648880:three_prime_UTR
TGACATCAACTGTATGCAAT+GGG 0.454065 4_3:+55410967 None:intergenic
AAGTGTTATGGCAAAAGATT+CGG 0.455588 4_3:-55411675 Msa0648880:three_prime_UTR
TATCTGTTCACGCTGGTCAC+AGG 0.455814 4_3:+55410920 None:intergenic
TGTCTCCCTAATGATATCAT+AGG 0.456997 4_3:-55408143 Msa0648880:three_prime_UTR
TTCTATTCGTGTTGCGCTTG+AGG 0.457089 4_3:-55411267 Msa0648880:intron
CCTTTCGATCCTTCTGTCTC+CGG 0.459121 4_3:+55421773 None:intergenic
GCTGGGTCCTTTCTATATAC+AGG 0.459387 4_3:+55411806 None:intergenic
AGTGGGCCATCTTTCCTTAA+CGG 0.459869 4_3:-55417132 Msa0648880:five_prime_UTR
GCTCACGCCTCTGTTCTCTA+AGG 0.460998 4_3:+55416487 None:intergenic
AGATATCAAGGTGGATTTAG+TGG 0.461111 4_3:-55407149 Msa0648880:three_prime_UTR
TTCAATCGCACCAGCATCGC+AGG 0.461215 4_3:+55407646 None:intergenic
CGAGTGTGTCCTTGTCCGTT+TGG 0.461881 4_3:+55407407 None:intergenic
AATGGCACCCATGGAAGAAC+AGG 0.462588 4_3:+55408107 None:intergenic
AGTTTATGAAAGTCTGGATA+AGG 0.463267 4_3:-55417580 Msa0648880:five_prime_UTR
GTGATTTGGTTTCTGAATTG+AGG 0.463560 4_3:-55421669 Msa0648880:five_prime_UTR
CTAAGCATACCGTAAAGAAC+TGG 0.463709 4_3:-55407610 Msa0648880:three_prime_UTR
CATTTGTGGAAAGTCAGTTA+GGG 0.464364 4_3:-55421504 Msa0648880:five_prime_UTR
GTCCTCTGTTGAAGCTCTCA+AGG 0.468137 4_3:+55407570 None:intergenic
TCAAATTCCATCCCAAGAAT+AGG 0.469368 4_3:+55421460 None:intergenic
GGGTGAGCTATCTGTGAAGT+TGG 0.469468 4_3:-55421833 Msa0648880:five_prime_UTR
GATATTCAAAAGTGGATTTG+TGG 0.470411 4_3:-55411741 Msa0648880:three_prime_UTR
TGAAGATTGTGAAAGTGTTA+TGG 0.470428 4_3:-55411687 Msa0648880:three_prime_UTR
CTGCAATTTCCAATATATTG+AGG 0.471069 4_3:+55412039 None:intergenic
GGTGAGCTATCTGTGAAGTT+GGG 0.471423 4_3:-55421832 Msa0648880:five_prime_UTR
GTGCCGCTGCCTGAGGTGAT+GGG 0.472013 4_3:-55421616 Msa0648880:five_prime_UTR
ACCATGGGTGCATGGGCTTA+CGG 0.472672 4_3:-55411369 Msa0648880:three_prime_UTR
TAGAGAGAGAGGGATAGTTA+GGG 0.474228 4_3:-55422295 Msa0648880:five_prime_UTR
GATCAGGTATCTTCTGACCT+TGG 0.475017 4_3:+55417079 None:intergenic
GGCCGTCATTAGGAGTTAGT+TGG 0.475320 4_3:+55416926 None:intergenic
AGCAAGTCCATACGACCAAT+TGG 0.475429 4_3:+55421646 None:intergenic
TGAATAACCCTACTATCAAA+TGG 0.476764 4_3:+55416895 None:intergenic
TATAGCTTCTGCTTTGTCTA+GGG 0.478647 4_3:-55411876 Msa0648880:three_prime_UTR
GATATTGGGACTTTGAGAAA+TGG 0.479976 4_3:-55409550 Msa0648880:three_prime_UTR
GTGATCTTTGACCAAGAGAA+TGG 0.481511 4_3:+55407525 None:intergenic
TGCAGATGTGGTTCTGTCAC+CGG 0.481511 4_3:-55421792 Msa0648880:five_prime_UTR
GTAAAGAACTGGGGTGCTCT+TGG 0.482129 4_3:-55407599 Msa0648880:three_prime_UTR
ATCACATCTATCTTGGCTGC+TGG 0.482428 4_3:+55407353 None:intergenic
GCGAGCAGCAGCTCTCTCGC+TGG 0.483979 4_3:+55416274 None:intergenic
TCACCCCTCGTTGCCTCAGA+AGG 0.484046 4_3:+55421850 None:intergenic
GCCATTTACAACTGCTGCTG+TGG 0.484406 4_3:-55408090 Msa0648880:three_prime_UTR
ACTGTTGATGAAGGCTTTGA+CGG 0.485473 4_3:-55411494 Msa0648880:three_prime_UTR
GAATCTGCACATAATGTGTA+TGG 0.485800 4_3:-55417105 Msa0648880:five_prime_UTR
TTAGGATCAACTGTTGATGA+AGG 0.486401 4_3:-55411503 Msa0648880:three_prime_UTR
AAAATTGCTTCAGAATCAGC+TGG 0.487551 4_3:+55411788 None:intergenic
GTTGCAAGAACACCCACTAC+TGG 0.487757 4_3:-55413377 Msa0648880:three_prime_UTR
TGATTTACATGTAGGTTTGG+AGG 0.487906 4_3:-55414043 Msa0648880:intron
TCATTCCCGTTAAGGAAAGA+TGG 0.488817 4_3:+55417126 None:intergenic
AATTCCAGAGGCAGTGGCAG+TGG 0.489583 4_3:-55417640 Msa0648880:intron
GGTGATGGGCTTTCGTAGGA+TGG 0.491669 4_3:-55421602 Msa0648880:five_prime_UTR
TTGATTACTGTGGCAAATGA+AGG 0.492963 4_3:-55411293 Msa0648880:three_prime_UTR
ATATTCAAAAGTGGATTTGT+GGG 0.493837 4_3:-55411740 Msa0648880:three_prime_UTR
TAGAGAACAGAGGCGTGAGC+AGG 0.495453 4_3:-55416484 Msa0648880:CDS
ATCTTAGATGTTGACTGCAT+TGG 0.495649 4_3:-55408246 Msa0648880:intron
AAAATATTTCTTTAAAGTAG+TGG 0.497397 4_3:+55417477 None:intergenic
TGGAATTACATGACAGCTGT+TGG 0.497488 4_3:-55410617 Msa0648880:three_prime_UTR
AGATGTGATCACTAGTGAAA+GGG 0.498049 4_3:-55407339 Msa0648880:three_prime_UTR
AGAGGCGTGAGCAGGAGCAG+CGG 0.498571 4_3:-55416476 Msa0648880:CDS
GGATCGAAAGGCTGTGGCAC+CGG 0.501486 4_3:-55421761 Msa0648880:five_prime_UTR
GCAAATTGTCGCAAAATCTC+CGG 0.501705 4_3:+55413140 None:intergenic
AAAAGATACCTGTTCTTCCA+TGG 0.502448 4_3:-55408115 Msa0648880:three_prime_UTR
GGAATTAGCTGCATCAAAGA+AGG 0.502733 4_3:-55416198 Msa0648880:CDS
AGTGCTCCTCTTTCTGGAAG+TGG 0.505540 4_3:+55407478 None:intergenic
CATAAACATCGTTTGACGCC+TGG 0.505853 4_3:-55412113 Msa0648880:three_prime_UTR
TTCCAAGTGCAGGTTAATGA+TGG 0.505924 4_3:-55412227 Msa0648880:intron
TCCCTCATTGGAACCAAACT+CGG 0.506744 4_3:+55421733 None:intergenic
ATATTCTGTTTCTTCAACTG+AGG 0.506879 4_3:+55413098 None:intergenic
GTTGGATTGAATAATTATCT+GGG 0.507027 4_3:+55410817 None:intergenic
AAGAAGGAAGATTACTTGGA+TGG 0.507223 4_3:-55407439 Msa0648880:three_prime_UTR
GTTGCAGAGCTTCTTGGGGA+AGG 0.508746 4_3:+55408491 None:intergenic
TCACCTCAATAACTGACAAA+AGG 0.510681 4_3:+55409255 None:intergenic
AGGAAAGAAGGAAGATTACT+TGG 0.511265 4_3:-55407443 Msa0648880:three_prime_UTR
CAAAACAGTGTTACGAACTC+TGG 0.511381 4_3:-55413341 Msa0648880:three_prime_UTR
GAGATGATGGACCTATTCTT+GGG 0.511691 4_3:-55421471 Msa0648880:five_prime_UTR
TGACCAAGGTTGAATCGAAA+AGG 0.511884 4_3:+55414622 None:intergenic
ATTCCAGAGGCAGTGGCAGT+GGG 0.512234 4_3:-55417639 Msa0648880:intron
CCTTATTGAAGATGAACGTC+TGG 0.512365 4_3:-55416228 Msa0648880:CDS
GGAACCAAACTCGGCCCAGC+CGG 0.513552 4_3:+55421742 None:intergenic
CAAGGCCGCAGCCATTCTCT+TGG 0.513951 4_3:-55407536 Msa0648880:three_prime_UTR
GCTATGGAAGCTTGTTCAGA+AGG 0.515091 4_3:-55422079 Msa0648880:five_prime_UTR
CACCATCAAGAGAACTAAAG+TGG 0.515136 4_3:+55417181 None:intergenic
GAGAGCTGCTGCTCGCAGAA+TGG 0.515830 4_3:-55416267 Msa0648880:CDS
AGAATATATGTAGTAAAAGT+AGG 0.516028 4_3:-55406898 Msa0648880:three_prime_UTR
TTGACATCAACTGTATGCAA+TGG 0.516202 4_3:+55410966 None:intergenic
GCCGAGTTTGGTTCCAATGA+GGG 0.516330 4_3:-55421734 Msa0648880:five_prime_UTR
TATCACTTCATCTTCAGCTA+TGG 0.518032 4_3:-55422095 Msa0648880:five_prime_UTR
ATATGAAGATGATCTTCGTC+AGG 0.518669 4_3:-55407219 Msa0648880:three_prime_UTR
AAAATCATACATTGATCACT+TGG 0.519170 4_3:-55410757 Msa0648880:three_prime_UTR
GAATTTGATTCTTTGCCGCT+GGG 0.520804 4_3:-55421445 Msa0648880:five_prime_UTR
CTACGAAAGCCCATCACCTC+AGG 0.521433 4_3:+55421607 None:intergenic
TTGCAGAGCTTCTTGGGGAA+GGG 0.521700 4_3:+55408492 None:intergenic
TTGGTGAACCATGGGTGCAT+GGG 0.522424 4_3:-55411376 Msa0648880:three_prime_UTR
AGATGAACGTCTGGAACTCA+TGG 0.522555 4_3:-55416219 Msa0648880:CDS
CCTCATCATCCTCATTATAG+TGG 0.522633 4_3:+55407099 None:intergenic
TTTAAATCCATTAACATGGC+CGG 0.522665 4_3:-55413159 Msa0648880:three_prime_UTR
ATGTATAGATCATTGCCTCT+TGG 0.522671 4_3:-55410720 Msa0648880:three_prime_UTR
TCAGATTCTGACGAGAATGT+TGG 0.522775 4_3:-55414602 Msa0648880:CDS
TCGGCTTCCTTCCAGAGCTA+GGG 0.523058 4_3:+55412064 None:intergenic
TCTAGTGCCATTTGATAGTA+GGG 0.523253 4_3:-55416902 Msa0648880:CDS
GTTAGCTCCTAATCCAGTAG+TGG 0.523689 4_3:+55413364 None:intergenic
GGAACTACAGAGGGTGAAAG+AGG 0.523810 4_3:-55416315 Msa0648880:CDS
GGATGGAAAGGCACACCAAA+CGG 0.523936 4_3:-55407422 Msa0648880:three_prime_UTR
AAAGTCTTGGAGTTCAAAGC+TGG 0.524141 4_3:-55408446 Msa0648880:three_prime_UTR
GCAGAAGCTATAGCAGCCTC+TGG 0.524317 4_3:+55411887 None:intergenic
GTGGAAGATTATATAATTGG+AGG 0.525403 4_3:-55407014 Msa0648880:three_prime_UTR
CAAGAGTTACATCGACAAAT+GGG 0.526430 4_3:+55416968 None:intergenic
AAGAGATAAGTGTGATTTCG+TGG 0.526637 4_3:-55407192 Msa0648880:three_prime_UTR
TCAAGAATCTCCAACTGTGA+AGG 0.528592 4_3:+55421995 None:intergenic
ATACTGTCAGGCGTATGTAT+GGG 0.528747 4_3:-55413210 Msa0648880:intron
GTCGGAGGAGTATCAGAAGC+AGG 0.528939 4_3:-55407382 Msa0648880:three_prime_UTR
AAGTAACAAATTGCCAGTAT+CGG 0.529787 4_3:+55410679 None:intergenic
GGGAGTTGTGCCGCTGCCTG+AGG 0.530086 4_3:-55421623 Msa0648880:five_prime_UTR
TAATCCTATTCTAAAAGGTA+TGG 0.530532 4_3:-55411417 Msa0648880:three_prime_UTR
GCATCTAACAGCAGGAAAGA+AGG 0.530602 4_3:-55407455 Msa0648880:three_prime_UTR
TCTCATCCTTGTTGAAGAAG+AGG 0.531004 4_3:+55409289 None:intergenic
GGGCATCCTCAAGTAGTTGA+AGG 0.531261 4_3:-55413314 Msa0648880:three_prime_UTR
GGCCTTGAGAGCTTCAACAG+AGG 0.531597 4_3:-55407572 Msa0648880:three_prime_UTR
TTGCCATGAGAAAGTGGATG+AGG 0.533142 4_3:-55411528 Msa0648880:three_prime_UTR
GAAAGGCTGTGGCACCGGCT+GGG 0.534720 4_3:-55421756 Msa0648880:five_prime_UTR
ATCTGTTCACGCTGGTCACA+GGG 0.535030 4_3:+55410921 None:intergenic
TCGTGAAAGGCAGAAGGAAG+AGG 0.536904 4_3:-55416550 Msa0648880:CDS
TGCTGTGGCTCTAAGGCTCA+TGG 0.537086 4_3:-55408075 Msa0648880:three_prime_UTR
TGCTTTAAAGAAACAGATGT+TGG 0.537783 4_3:-55411114 Msa0648880:three_prime_UTR
TGAGACAAAAGATTTAGATC+AGG 0.539554 4_3:+55417063 None:intergenic
TGATAAACGCTATATTAAAG+AGG 0.541966 4_3:-55411078 Msa0648880:three_prime_UTR
CAGAGAGGTACAGAAAGTCT+TGG 0.543210 4_3:-55408459 Msa0648880:three_prime_UTR
GAAGAAACAGAATATTGAGC+AGG 0.543774 4_3:-55413090 Msa0648880:three_prime_UTR
AAGCCCATCACCTCAGGCAG+CGG 0.545022 4_3:+55421613 None:intergenic
AAAGAAGACTCCTTCACAGT+TGG 0.545192 4_3:-55422005 Msa0648880:five_prime_UTR
GGAGCACTGCATCTAACAGC+AGG 0.545676 4_3:-55407463 Msa0648880:three_prime_UTR
TGGAGAGGCAAGATCGTGAA+AGG 0.546045 4_3:-55416563 Msa0648880:CDS
TCTGCTTCTCAAAATGATCC+AGG 0.546387 4_3:-55410657 Msa0648880:three_prime_UTR
GGAAGATTACTTGGATGGAA+AGG 0.546712 4_3:-55407434 Msa0648880:three_prime_UTR
TCTCAAAATGATCCAGGTGC+TGG 0.547290 4_3:-55410651 Msa0648880:three_prime_UTR
TAGATGTGATCACTAGTGAA+AGG 0.548380 4_3:-55407340 Msa0648880:three_prime_UTR
ATTGAGGCCAATTGGTCGTA+TGG 0.548493 4_3:-55421653 Msa0648880:five_prime_UTR
CTGTACAGACTTGGGTGGGA+AGG 0.548847 4_3:+55414655 None:intergenic
AAAACACTCTTGGTGAACCA+TGG 0.548981 4_3:-55411385 Msa0648880:three_prime_UTR
AATGATGGAAATGTAACAGC+TGG 0.549507 4_3:+55411005 None:intergenic
CGAGATCCACTTCCAGAAAG+AGG 0.549732 4_3:-55407484 Msa0648880:three_prime_UTR
TCCGTAAGCCCATGCACCCA+TGG 0.550094 4_3:+55411368 None:intergenic
CATCAATGCAAACAGAAGTA+GGG 0.550131 4_3:+55409654 None:intergenic
GCTTACGGAGGGAGAGTACT+CGG 0.550620 4_3:-55411354 Msa0648880:three_prime_UTR
TTATATAATTCCAGAGGCAG+TGG 0.551720 4_3:-55417646 Msa0648880:intron
TGATGAGGAAGACATGGATG+TGG 0.552106 4_3:-55407084 Msa0648880:three_prime_UTR
GGGGAGCCGATAAGAGATGA+TGG 0.552227 4_3:-55421484 Msa0648880:five_prime_UTR
GGATCTCACCTAATATTCTA+GGG 0.552542 4_3:+55413441 None:intergenic
AACCCTCATCCACTTTCTCA+TGG 0.552585 4_3:+55411525 None:intergenic
GAACGTATTGCTCAATCTGA+AGG 0.553506 4_3:-55409350 Msa0648880:three_prime_UTR
GAATTAGCTGCATCAAAGAA+GGG 0.554107 4_3:-55416197 Msa0648880:CDS
GATATCAAGGTGGATTTAGT+GGG 0.554209 4_3:-55407148 Msa0648880:three_prime_UTR
TGAACAGATAAATGCACTAC+AGG 0.555624 4_3:-55410907 Msa0648880:three_prime_UTR
TGTCTCAGTCTCACCAAGGT+AGG 0.556621 4_3:-55417047 Msa0648880:five_prime_UTR
ACAGTGTTACGAACTCTGGT+GGG 0.557450 4_3:-55413337 Msa0648880:three_prime_UTR
ATCATACATTGATCACTTGG+CGG 0.557497 4_3:-55410754 Msa0648880:three_prime_UTR
TGAGAACAAGAACAAGCCAT+TGG 0.557922 4_3:-55422053 Msa0648880:five_prime_UTR
TGTACGACCTGTATATAGAA+AGG 0.558802 4_3:-55411813 Msa0648880:three_prime_UTR
TAAGATGATTCGACCTACCT+TGG 0.559673 4_3:+55417034 None:intergenic
TGATGGACCTATTCTTGGGA+TGG 0.560036 4_3:-55421467 Msa0648880:five_prime_UTR
AAGTAGCTGATGATGGTGAA+AGG 0.561021 4_3:-55411712 Msa0648880:three_prime_UTR
CAATGAAGTTTGGGAAGAAG+AGG 0.562624 4_3:-55409490 Msa0648880:three_prime_UTR
CTGTTACATTTCCATCATTG+GGG 0.563754 4_3:-55411001 Msa0648880:three_prime_UTR
TGATAGTAGGGTTATTCATG+AGG 0.564137 4_3:-55416890 Msa0648880:CDS
GTACAACAAAGAAGAAAATG+AGG 0.564407 4_3:-55406976 Msa0648880:three_prime_UTR
AAGGTTTCAAAGGAAGCGAA+AGG 0.564725 4_3:-55416857 Msa0648880:intron
TGGGTGCATGGGCTTACGGA+GGG 0.565347 4_3:-55411365 Msa0648880:three_prime_UTR
CTGATCGTCAATTGCAGATG+TGG 0.565410 4_3:-55421804 Msa0648880:five_prime_UTR
GAAATCACCTCATTGTTGCT+AGG 0.565899 4_3:+55413062 None:intergenic
GGTCGTACACAATATGTTGA+AGG 0.568738 4_3:+55411827 None:intergenic
GTGATGGGCTTTCGTAGGAT+GGG 0.569088 4_3:-55421601 Msa0648880:five_prime_UTR
TTAACTGTACAGACTTGGGT+GGG 0.569296 4_3:+55414651 None:intergenic
CATAATGTGTATGGAGTCCA+AGG 0.570350 4_3:-55417096 Msa0648880:five_prime_UTR
CTTATGCTTTCTGCTTCAGG+AGG 0.575386 4_3:-55417015 Msa0648880:CDS
AGAATCAGGATATTCAAAAG+TGG 0.575936 4_3:-55411749 Msa0648880:three_prime_UTR
AAAGAAACAGATGTTGGCTG+AGG 0.576176 4_3:-55411108 Msa0648880:three_prime_UTR
TAAGCATACCGTAAAGAACT+GGG 0.576826 4_3:-55407609 Msa0648880:three_prime_UTR
TGATAGTTGCCATGAGAAAG+TGG 0.578829 4_3:-55411534 Msa0648880:three_prime_UTR
AGAACTTTCAGTACTAGTCA+AGG 0.579089 4_3:-55409389 Msa0648880:three_prime_UTR
GGGATACAGAACTATTTGAA+AGG 0.579148 4_3:-55411856 Msa0648880:three_prime_UTR
GGCCGAGTTTGGTTCCAATG+AGG 0.579352 4_3:-55421735 Msa0648880:five_prime_UTR
GAACAAGAACAAGCCATTGG+AGG 0.580470 4_3:-55422050 Msa0648880:five_prime_UTR
TGGGCAAGTCAAACTTAATG+TGG 0.580853 4_3:-55407033 Msa0648880:three_prime_UTR
CAGAATGTCTTCCGTTGATG+AGG 0.581387 4_3:+55408417 None:intergenic
AAACACTCTTGGTGAACCAT+GGG 0.581445 4_3:-55411384 Msa0648880:three_prime_UTR
CTTTCAGGAACGTTTAGAAG+CGG 0.583806 4_3:-55411141 Msa0648880:intron
ATTGGTCGTATGGACTTGCT+GGG 0.583870 4_3:-55421643 Msa0648880:five_prime_UTR
TAACTCTTGAGACTCGAATG+AGG 0.585297 4_3:-55416954 Msa0648880:CDS
CATACCCCTTCAACTACTTG+AGG 0.585409 4_3:+55413308 None:intergenic
GCAGTTGTAAATGGCACCCA+TGG 0.585620 4_3:+55408098 None:intergenic
TCGGTATCATTGGACTTACG+TGG 0.585808 4_3:-55409857 Msa0648880:three_prime_UTR
AGAGGGTGAAAGAGGCAGCA+AGG 0.585938 4_3:-55416307 Msa0648880:CDS
CCACTATAATGAGGATGATG+AGG 0.586613 4_3:-55407099 Msa0648880:three_prime_UTR
TAGTAAAACTGGAATTGTTG+TGG 0.587246 4_3:-55407997 Msa0648880:intron
TTAGCTCCTAATCCAGTAGT+GGG 0.587697 4_3:+55413365 None:intergenic
TTTAACTGTACAGACTTGGG+TGG 0.588332 4_3:+55414650 None:intergenic
CGGTATCATTGGACTTACGT+GGG 0.588446 4_3:-55409856 Msa0648880:three_prime_UTR
TGTTGCTATTATGCAAGAGA+AGG 0.588520 4_3:-55412156 Msa0648880:three_prime_UTR
TGAGGATGATGAGGAAGACA+TGG 0.588818 4_3:-55407090 Msa0648880:three_prime_UTR
TGCCATGAGAAAGTGGATGA+GGG 0.588941 4_3:-55411527 Msa0648880:three_prime_UTR
AACAGTGTTACGAACTCTGG+TGG 0.589322 4_3:-55413338 Msa0648880:three_prime_UTR
AACATAATGACTCTGCTGCA+TGG 0.589977 4_3:+55406667 None:intergenic
TACTATCAAATGGCACTAGA+CGG 0.590537 4_3:+55416905 None:intergenic
CAGCAATTTCACTAGACGTA+CGG 0.591153 4_3:+55411459 None:intergenic
TTGATATAAGAAATTGGCAG+CGG 0.591217 4_3:-55413184 Msa0648880:three_prime_UTR
GCTGGAAGCTTCCTCATCAA+CGG 0.591764 4_3:-55408428 Msa0648880:three_prime_UTR
TCAATGACGACGGAAAATAT+GGG 0.592118 4_3:-55407052 Msa0648880:three_prime_UTR
TTAATCACTGTAACCAGATG+AGG 0.593787 4_3:+55406932 None:intergenic
TTATATAATTGGAGGAGACT+CGG 0.593791 4_3:-55407006 Msa0648880:three_prime_UTR
GATAGATGTAGTAACTCTCT+CGG 0.594323 4_3:+55417203 None:intergenic
TGATGATTTGGACACATCAG+TGG 0.595094 4_3:-55409636 Msa0648880:three_prime_UTR
AGTGGAGACTTACCCTTCTG+AGG 0.595134 4_3:-55421863 Msa0648880:five_prime_UTR
ACAGAAGGATCGAAAGGCTG+TGG 0.595954 4_3:-55421767 Msa0648880:five_prime_UTR
GATTGAGAAACTGAGACAGA+AGG 0.596277 4_3:-55416339 Msa0648880:CDS
TACTGTCAGGCGTATGTATG+GGG 0.596294 4_3:-55413209 Msa0648880:intron
ATCAACGGAAGACATTCTGC+AGG 0.596653 4_3:-55408413 Msa0648880:intron
AAAGATACCTGTTCTTCCAT+GGG 0.597305 4_3:-55408114 Msa0648880:three_prime_UTR
CACCCCTCGTTGCCTCAGAA+GGG 0.598532 4_3:+55421851 None:intergenic
GATGTTGACGAAAACACTCT+TGG 0.598993 4_3:-55411395 Msa0648880:three_prime_UTR
CTGAGGTGATGGGCTTTCGT+AGG 0.599442 4_3:-55421606 Msa0648880:five_prime_UTR
TCTGTGAGAGAAGAGATTGA+CGG 0.601578 4_3:-55407281 Msa0648880:three_prime_UTR
CTAGGACTTCACTATCTAGT+GGG 0.601772 4_3:-55417149 Msa0648880:five_prime_UTR
TCTAATAAGGAATTCTGCAG+AGG 0.602107 4_3:+55410873 None:intergenic
TTACCCTTCTGAGGCAACGA+GGG 0.602358 4_3:-55421854 Msa0648880:five_prime_UTR
GGCATCCTCAAGTAGTTGAA+GGG 0.602461 4_3:-55413313 Msa0648880:three_prime_UTR
TCTAGGACTTCACTATCTAG+TGG 0.603066 4_3:-55417150 Msa0648880:five_prime_UTR
GATAGTGAAGTCCTAGAATG+TGG 0.603793 4_3:+55417156 None:intergenic
TTTGACCAAGAGAATGGCTG+CGG 0.605216 4_3:+55407531 None:intergenic
AATGAGGATCCAGATAGAGT+TGG 0.608709 4_3:-55406960 Msa0648880:three_prime_UTR
AGTAGCTGATGATGGTGAAA+GGG 0.609014 4_3:-55411711 Msa0648880:three_prime_UTR
TAGTAGGGTTATTCATGAGG+AGG 0.609118 4_3:-55416887 Msa0648880:CDS
CAGAATGGTCAAAGACGCAA+TGG 0.610160 4_3:-55416252 Msa0648880:CDS
GAATGTTGGAAATCTTCTGA+TGG 0.610225 4_3:-55414588 Msa0648880:intron
GAAGCTGATTGATTCTGTAG+AGG 0.610785 4_3:-55410595 Msa0648880:intron
GAGTGATTAAGATGTGTGGT+TGG 0.610957 4_3:+55422331 None:intergenic
AAAATGATCCAGGTGCTGGT+AGG 0.611893 4_3:-55410647 Msa0648880:three_prime_UTR
AACTCTTGAGACTCGAATGA+GGG 0.612493 4_3:-55416953 Msa0648880:CDS
GCGTGAAAGACAGCGAGAGG+AGG 0.612619 4_3:-55416517 Msa0648880:CDS
GGCATTTAAATCCATTAACA+TGG 0.612821 4_3:-55413163 Msa0648880:three_prime_UTR
CTAGCTCTGGAAGGAAGCCG+AGG 0.612877 4_3:-55412062 Msa0648880:three_prime_UTR
AAAGGTTGCAGAGCTTCTTG+GGG 0.614219 4_3:+55408487 None:intergenic
AGTTTGGTTCCAATGAGGGA+CGG 0.614591 4_3:-55421730 Msa0648880:five_prime_UTR
AAAGGCAGAAGGAAGAGGAA+AGG 0.614714 4_3:-55416545 Msa0648880:CDS
GGGTACCCCAAAAGATATCA+CGG 0.614774 4_3:-55407318 Msa0648880:three_prime_UTR
GTTGCTATTATGCAAGAGAA+GGG 0.615100 4_3:-55412155 Msa0648880:three_prime_UTR
TAATAAATAGTTGATTAAGG+AGG 0.615165 4_3:+55422384 None:intergenic
AAAGGCACACCAAACGGACA+AGG 0.616597 4_3:-55407416 Msa0648880:three_prime_UTR
ACAGAAGGAGGAACTACAGA+GGG 0.616829 4_3:-55416324 Msa0648880:CDS
CCGGAGACAGAAGGATCGAA+AGG 0.616955 4_3:-55421773 Msa0648880:five_prime_UTR
ATTCTTGTTTCCCAAACATG+AGG 0.617138 4_3:+55411031 None:intergenic
GACAAGGACACACTCGTGGT+CGG 0.617683 4_3:-55407400 Msa0648880:three_prime_UTR
AGTGTTACGAACTCTGGTGG+GGG 0.617703 4_3:-55413335 Msa0648880:three_prime_UTR
GCAAGATCGTGAAAGGCAGA+AGG 0.617830 4_3:-55416556 Msa0648880:CDS
CACTGTCATGAGAAATGGGA+AGG 0.619299 4_3:-55411582 Msa0648880:three_prime_UTR
AGGGCTTATCTAATCCAAGA+AGG 0.620500 4_3:-55412136 Msa0648880:three_prime_UTR
TCATGAAGCAGCATAAGAAG+AGG 0.621050 4_3:+55406633 None:intergenic
AGAACAGGACCACTATAATG+AGG 0.622319 4_3:-55407108 Msa0648880:three_prime_UTR
TCATATGCAAGTGAGACTCT+CGG 0.623142 4_3:+55409831 None:intergenic
ACAATCTGAATTGCCTGTTG+AGG 0.624410 4_3:-55417607 Msa0648880:five_prime_UTR
GGTCTCTTGCTTCTGCTGTG+AGG 0.626892 4_3:+55408028 None:intergenic
CTCCCTAATGATATCATAGG+TGG 0.628173 4_3:-55408140 Msa0648880:three_prime_UTR
CACCAACTAACTCCTAATGA+CGG 0.628946 4_3:-55416928 Msa0648880:CDS
ATAATTTCTAATCTACGCAG+TGG 0.629876 4_3:-55412197 Msa0648880:three_prime_UTR
ATGGGTGCATGGGCTTACGG+AGG 0.630335 4_3:-55411366 Msa0648880:three_prime_UTR
GTGAGAGTGATTAAGATGTG+TGG 0.631814 4_3:+55422327 None:intergenic
CATGAAGCAGCATAAGAAGA+GGG 0.632091 4_3:+55406634 None:intergenic
TCTCTTGGTCAAAGATCACA+AGG 0.633658 4_3:-55407521 Msa0648880:three_prime_UTR
CGTCTTCGATCCAAACCAAG+AGG 0.633977 4_3:+55410705 None:intergenic
ATTTGTGGAAAGTCAGTTAG+GGG 0.634159 4_3:-55421503 Msa0648880:five_prime_UTR
GTTACATTTCCATCATTGGG+GGG 0.634657 4_3:-55410999 Msa0648880:three_prime_UTR
TCTTGTTGCTTTGATTACTG+TGG 0.634697 4_3:-55411303 Msa0648880:three_prime_UTR
GCATCCTCAAGTAGTTGAAG+GGG 0.634795 4_3:-55413312 Msa0648880:intron
TTCTCAATACTATATAACGC+TGG 0.635046 4_3:-55406693 Msa0648880:three_prime_UTR
CAGTGTTACGAACTCTGGTG+GGG 0.635086 4_3:-55413336 Msa0648880:three_prime_UTR
GATGTGATCACTAGTGAAAG+GGG 0.636298 4_3:-55407338 Msa0648880:three_prime_UTR
GAACTTTCAGTACTAGTCAA+GGG 0.636390 4_3:-55409388 Msa0648880:three_prime_UTR
CTTTGAGAAATGGATGCGAA+AGG 0.637033 4_3:-55409540 Msa0648880:three_prime_UTR
GTTATCAAATATAGCAACAG+TGG 0.639390 4_3:-55406729 Msa0648880:intron
ATTCATCCTCTTCTTCAACA+AGG 0.640522 4_3:-55409295 Msa0648880:three_prime_UTR
AAATTGCTTCAGAATCAGCT+GGG 0.643411 4_3:+55411789 None:intergenic
AGAGATTCCTTAGAGAACAG+AGG 0.644884 4_3:-55416494 Msa0648880:CDS
GCAGAAGCAAGAGACCAAGA+AGG 0.647654 4_3:-55408021 Msa0648880:three_prime_UTR
GTTCTGTCACCGGAGACAGA+AGG 0.648449 4_3:-55421782 Msa0648880:five_prime_UTR
AGAGCTTCAACAGAGGACAA+AGG 0.650183 4_3:-55407565 Msa0648880:three_prime_UTR
AGAGTACTCGGATCTTAGTG+TGG 0.651530 4_3:-55411342 Msa0648880:three_prime_UTR
GTGCATTTATCTGTTCACGC+TGG 0.651928 4_3:+55410913 None:intergenic
GGTGCAGAAGTAGCTGATGA+TGG 0.652009 4_3:-55411719 Msa0648880:three_prime_UTR
AATTAGCTGCATCAAAGAAG+GGG 0.652854 4_3:-55416196 Msa0648880:CDS
TTATCAAATATAGCAACAGT+GGG 0.652891 4_3:-55406728 Msa0648880:intron
TAGATGTTGACTGCATTGGA+AGG 0.653409 4_3:-55408242 Msa0648880:three_prime_UTR
ATTGCGTGAAAGACAGCGAG+AGG 0.653413 4_3:-55416520 Msa0648880:CDS
AGAGGACAAAGGACTCGACA+AGG 0.655310 4_3:-55407554 Msa0648880:three_prime_UTR
ATTTCTGTAAAACTATGCAA+TGG 0.657526 4_3:+55417515 None:intergenic
CTTACCCTTCTGAGGCAACG+AGG 0.660159 4_3:-55421855 Msa0648880:five_prime_UTR
AACGGACAAGGACACACTCG+TGG 0.662576 4_3:-55407404 Msa0648880:three_prime_UTR
CAAAATCTGGAATCATATCG+AGG 0.662905 4_3:-55416137 Msa0648880:intron
TGAGAAACTGAGACAGAAGG+AGG 0.663825 4_3:-55416336 Msa0648880:CDS
TACCCTTCTGAGGCAACGAG+GGG 0.664369 4_3:-55421853 Msa0648880:five_prime_UTR
ATGAGAAATGGGAAGGACAA+TGG 0.665487 4_3:-55411575 Msa0648880:three_prime_UTR
GTACTCGGATCTTAGTGTGG+AGG 0.671282 4_3:-55411339 Msa0648880:three_prime_UTR
AGCTCGTGTATCGTCTGACG+AGG 0.673785 4_3:+55421538 None:intergenic
CTTCTCATATGTGATTTGTG+CGG 0.676200 4_3:-55409455 Msa0648880:three_prime_UTR
TGTTACATTTCCATCATTGG+GGG 0.678701 4_3:-55411000 Msa0648880:three_prime_UTR
AAGGACACACTCGTGGTCGG+AGG 0.679414 4_3:-55407397 Msa0648880:three_prime_UTR
GACAGAAGGAGGAACTACAG+AGG 0.682907 4_3:-55416325 Msa0648880:CDS
TTCTCGTCAGAATCTGACCA+AGG 0.692936 4_3:+55414608 None:intergenic
TTCCAGAGGCAGTGGCAGTG+GGG 0.693343 4_3:-55417638 Msa0648880:intron
GTGTTACGAACTCTGGTGGG+GGG 0.695516 4_3:-55413334 Msa0648880:three_prime_UTR
AATAATGATAGATATCAAGG+TGG 0.697009 4_3:-55407158 Msa0648880:three_prime_UTR
TACAACAAGCAAATCACCAG+AGG 0.701757 4_3:-55411903 Msa0648880:three_prime_UTR
AGATAAGTGTGATTTCGTGG+TGG 0.702307 4_3:-55407189 Msa0648880:three_prime_UTR
CTGAAAGTTCTATGGCACGA+AGG 0.705430 4_3:+55409401 None:intergenic
GGTGCATCCTAGCAACAATG+AGG 0.706841 4_3:-55413069 Msa0648880:intron
TGTAAAAGATGCATGCATCG+AGG 0.729775 4_3:+55408051 None:intergenic
GATGACAATGTCAATGACGA+CGG 0.741907 4_3:-55407062 Msa0648880:three_prime_UTR
AAGCATACCGTAAAGAACTG+GGG 0.748223 4_3:-55407608 Msa0648880:three_prime_UTR
GGTGCACCAAATGCACCCAG+CGG 0.769032 4_3:+55421430 None:intergenic
TGTCAAGAATCTCAACACAG+AGG 0.797170 4_3:-55409723 Msa0648880:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATTA+TGG - chr4_3:55408583-55408602 Msa0648880:intron 0.0%
!! AAATAATAAATAGTTGATTA+AGG + chr4_3:55406618-55406637 None:intergenic 10.0%
!!! AAATTTCATTTTTTTTTTTG+TGG - chr4_3:55407048-55407067 Msa0648880:three_prime_UTR 10.0%
!!! GTAATATTCTATTTTAATTT+TGG - chr4_3:55410694-55410713 Msa0648880:three_prime_UTR 10.0%
!!! TATTGAAAATATGATTTTTA+AGG - chr4_3:55410844-55410863 Msa0648880:three_prime_UTR 10.0%
!!! TGGTTTTAAATTATTTTATA+GGG - chr4_3:55413828-55413847 Msa0648880:intron 10.0%
!!! TTTAACTTTTTTATTTTGAA+AGG - chr4_3:55416539-55416558 Msa0648880:CDS 10.0%
!!! TTAACTTTTTTATTTTGAAA+GGG - chr4_3:55416540-55416559 Msa0648880:CDS 10.0%
!! AGTTAATAAAATATTTACAT+TGG - chr4_3:55420035-55420054 Msa0648880:intron 10.0%
!! TTAAAAAAGAAAAATTTAGT+GGG + chr4_3:55420320-55420339 None:intergenic 10.0%
!! ATTAAAAAAGAAAAATTTAG+TGG + chr4_3:55420321-55420340 None:intergenic 10.0%
!! CAGAAAATATGTATATAATA+GGG + chr4_3:55407702-55407721 None:intergenic 15.0%
!!! CTTATAAAATAGAACAATTT+TGG + chr4_3:55407966-55407985 None:intergenic 15.0%
!!! CAAAATTGTTCTATTTTATA+AGG - chr4_3:55407964-55407983 Msa0648880:intron 15.0%
!!! CAGATTTTTGATTAATTTTA+AGG + chr4_3:55408125-55408144 None:intergenic 15.0%
!!! TAATTTTAAAACTGTTTTGA+GGG + chr4_3:55410347-55410366 None:intergenic 15.0%
!!! TCAAAACAGTTTTAAAATTA+GGG - chr4_3:55410347-55410366 Msa0648880:intron 15.0%
!!! AAAATATTTCTTTAAAGTAG+TGG + chr4_3:55411522-55411541 None:intergenic 15.0%
!!! TTTTGTTAGTAATTTTAGTT+GGG + chr4_3:55413267-55413286 None:intergenic 15.0%
!!! TTTTTGTTAGTAATTTTAGT+TGG + chr4_3:55413268-55413287 None:intergenic 15.0%
!! TATAACAATTAAGGAAAATA+GGG + chr4_3:55413607-55413626 None:intergenic 15.0%
!! ATATAACAATTAAGGAAAAT+AGG + chr4_3:55413608-55413627 None:intergenic 15.0%
!! ATATAACAATTAAGGAAAAT+AGG + chr4_3:55413608-55413627 None:intergenic 15.0%
!!! GTGGTTTTAAATTATTTTAT+AGG - chr4_3:55413827-55413846 Msa0648880:intron 15.0%
!! TATATTTCGATGAAAAATAT+TGG + chr4_3:55414187-55414206 None:intergenic 15.0%
!!! TTTCATCGAAATATATTTTT+AGG - chr4_3:55414192-55414211 Msa0648880:intron 15.0%
!!! AAATCAAGGTATTTATTTTA+TGG + chr4_3:55414771-55414790 None:intergenic 15.0%
!! ATTGCATTTATTATCATATA+TGG - chr4_3:55414895-55414914 Msa0648880:intron 15.0%
!!! ATCTTCAATATCTTTTATAA+TGG + chr4_3:55415599-55415618 None:intergenic 15.0%
!!! TATAAAATTGTGTTTGTTTT+TGG - chr4_3:55416231-55416250 Msa0648880:CDS 15.0%
!! GTAAATTAGATAAAAAATTG+TGG - chr4_3:55416292-55416311 Msa0648880:CDS 15.0%
!!! GCATATAAAATTATTTTTCT+AGG - chr4_3:55416701-55416720 Msa0648880:CDS 15.0%
!! AAATACAATAAATAAGAGTA+TGG - chr4_3:55418920-55418939 Msa0648880:intron 15.0%
!!! AATACAATAAATAAGAGTAT+GGG - chr4_3:55418921-55418940 Msa0648880:intron 15.0%
!! CACAAAACAAAATAATATAT+AGG + chr4_3:55419070-55419089 None:intergenic 15.0%
!!! TATATTATTTTGTTTTGTGA+TGG - chr4_3:55419071-55419090 Msa0648880:intron 15.0%
!!! CTATTCTAAAAATAAATCAA+TGG - chr4_3:55419904-55419923 Msa0648880:intron 15.0%
!!! AGTTTTCTTTTTAAAACTTA+AGG - chr4_3:55421142-55421161 Msa0648880:intron 15.0%
!! AATAATAATGATAGATATCA+AGG - chr4_3:55421835-55421854 Msa0648880:five_prime_UTR 15.0%
!! TAATAAATAGTTGATTAAGG+AGG + chr4_3:55406615-55406634 None:intergenic 20.0%
!!! TTTTTTTTTGTGGATTGTTT+TGG - chr4_3:55407058-55407077 Msa0648880:three_prime_UTR 20.0%
!! CCAGAAAATATGTATATAAT+AGG + chr4_3:55407703-55407722 None:intergenic 20.0%
!!! CCTATTATATACATATTTTC+TGG - chr4_3:55407700-55407719 Msa0648880:intron 20.0%
!! AATGTGAACTAAAATTAACA+AGG + chr4_3:55407833-55407852 None:intergenic 20.0%
!! TTAATATAGTATGCATACTA+TGG - chr4_3:55407871-55407890 Msa0648880:intron 20.0%
!! TAATATAGTATGCATACTAT+GGG - chr4_3:55407872-55407891 Msa0648880:intron 20.0%
!! TATATATATAGTTGTCAATG+CGG - chr4_3:55408003-55408022 Msa0648880:three_prime_UTR 20.0%
!! TTATAATGCAGAAAATTCTA+GGG - chr4_3:55408317-55408336 Msa0648880:intron 20.0%
!!! AACATTTTAAACCGTTTTAA+TGG + chr4_3:55408363-55408382 None:intergenic 20.0%
!!! ATTAAAACGGTTTAAAATGT+TGG - chr4_3:55408362-55408381 Msa0648880:intron 20.0%
!!! TTAAAACGGTTTAAAATGTT+GGG - chr4_3:55408363-55408382 Msa0648880:intron 20.0%
!!! TGTATTTTTGTTTCTATTTG+TGG - chr4_3:55408393-55408412 Msa0648880:intron 20.0%
!! TATATATTAGTTGTCAAATG+AGG + chr4_3:55408554-55408573 None:intergenic 20.0%
!! CAATAATTGTCAGAATTAAT+GGG - chr4_3:55408683-55408702 Msa0648880:intron 20.0%
!! AATAATTGTCAGAATTAATG+GGG - chr4_3:55408684-55408703 Msa0648880:intron 20.0%
!! TTAATTTCATTAGATGAACA+AGG - chr4_3:55409035-55409054 Msa0648880:intron 20.0%
!!! TTGAACTGAAATTTTGATTT+TGG + chr4_3:55409447-55409466 None:intergenic 20.0%
!!! TTATACTTATAACTGTTTTC+TGG - chr4_3:55409775-55409794 Msa0648880:three_prime_UTR 20.0%
!! AATGAAAACAGTTAGAAAAA+GGG + chr4_3:55409978-55409997 None:intergenic 20.0%
!!! CTAATTTTAAAACTGTTTTG+AGG + chr4_3:55410348-55410367 None:intergenic 20.0%
!!! CTCAAAACAGTTTTAAAATT+AGG - chr4_3:55410346-55410365 Msa0648880:intron 20.0%
!!! TTTTAAAATTAGGGTCAATT+TGG - chr4_3:55410356-55410375 Msa0648880:intron 20.0%
!!! TTTAAAATTAGGGTCAATTT+GGG - chr4_3:55410357-55410376 Msa0648880:intron 20.0%
!!! ATTTAAAATATTGAATGAGC+CGG - chr4_3:55410650-55410669 Msa0648880:three_prime_UTR 20.0%
!! TTTCCAAAATCACTTTATAA+GGG + chr4_3:55411220-55411239 None:intergenic 20.0%
!!! TCATATTTTATCTGTATCTT+TGG - chr4_3:55411602-55411621 Msa0648880:three_prime_UTR 20.0%
!!! TTGTAAAACAGGAAATTTTA+AGG - chr4_3:55412291-55412310 Msa0648880:intron 20.0%
!! TAGCATAAATATAATCATCA+AGG + chr4_3:55412360-55412379 None:intergenic 20.0%
!! GATTTATACTCTATTCAAAT+TGG + chr4_3:55413094-55413113 None:intergenic 20.0%
!! TGATACCAAAAAATATTGTT+AGG - chr4_3:55413392-55413411 Msa0648880:three_prime_UTR 20.0%
!! TAATAAGTAGGTAGTTAATT+AGG - chr4_3:55413440-55413459 Msa0648880:exon 20.0%
!!! TCTTGTTATTTAATCCTAAT+GGG + chr4_3:55413491-55413510 None:intergenic 20.0%
!! GAAGAAACATATAACAATTA+AGG + chr4_3:55413616-55413635 None:intergenic 20.0%
!!! TGTTTAACACAGTTTTTTAT+GGG + chr4_3:55413687-55413706 None:intergenic 20.0%
!!! TTGTTTAACACAGTTTTTTA+TGG + chr4_3:55413688-55413707 None:intergenic 20.0%
!! GAAGAAACATATAACAATTA+AGG + chr4_3:55413616-55413635 None:intergenic 20.0%
!!! AGTTTAACACAGTTTTTTAT+GGG + chr4_3:55413791-55413810 None:intergenic 20.0%
!!! TGATAAGTTCTAAACATTTT+GGG + chr4_3:55414029-55414048 None:intergenic 20.0%
!!! ATGATAAGTTCTAAACATTT+TGG + chr4_3:55414030-55414049 None:intergenic 20.0%
!! TAGCAATTCAAATATTTGTA+TGG - chr4_3:55414051-55414070 Msa0648880:intron 20.0%
!! ATTGATTGAAACCAAATAAT+TGG - chr4_3:55414298-55414317 Msa0648880:intron 20.0%
!!! AAATAATTGGTTTTTCAGAT+GGG - chr4_3:55414311-55414330 Msa0648880:intron 20.0%
!!! AGTATTTTTTTCTAAACCTT+TGG - chr4_3:55415057-55415076 Msa0648880:intron 20.0%
!! ATATTCATATAATGAATACC+AGG - chr4_3:55415406-55415425 Msa0648880:intron 20.0%
!!! ATATTTTCTCTCAATATTAC+AGG - chr4_3:55415531-55415550 Msa0648880:intron 20.0%
!!! TATTCTGAGAAGTAAATTTT+AGG - chr4_3:55416163-55416182 Msa0648880:CDS 20.0%
!! TAAAAAAAGGATATCAGAAT+TGG - chr4_3:55416329-55416348 Msa0648880:CDS 20.0%
!! AAAAAAAGGATATCAGAATT+GGG - chr4_3:55416330-55416349 Msa0648880:CDS 20.0%
!! ACAAGATCTTAATAAAATGA+TGG + chr4_3:55416471-55416490 None:intergenic 20.0%
!!! TTTTTGTTTATCTAGAAATC+TGG - chr4_3:55417058-55417077 Msa0648880:five_prime_UTR 20.0%
!! TTTATCTTGACTATGATTTA+TGG - chr4_3:55419776-55419795 Msa0648880:intron 20.0%
!! TAAAATATTTACATTGGACT+TGG - chr4_3:55420041-55420060 Msa0648880:intron 20.0%
!! AAAATATTTACATTGGACTT+GGG - chr4_3:55420042-55420061 Msa0648880:intron 20.0%
!! ATAAAAGAATACTTGCAATT+TGG - chr4_3:55420070-55420089 Msa0648880:intron 20.0%
!!! TATCACTAGTTTAAATCTTT+TGG - chr4_3:55420669-55420688 Msa0648880:intron 20.0%
!!! AAGTTTTAAAAAGAAAACTG+TGG + chr4_3:55421141-55421160 None:intergenic 20.0%
!! AATGTGGAAGATTATATAAT+TGG - chr4_3:55421979-55421998 Msa0648880:intron 20.0%
!! AGAATATATGTAGTAAAAGT+AGG - chr4_3:55422098-55422117 Msa0648880:five_prime_UTR 20.0%
!!! TATATTTTGTTTAGTAATGC+AGG - chr4_3:55422138-55422157 Msa0648880:five_prime_UTR 20.0%
!!! TGATATCTAACAAGAAATTT+TGG - chr4_3:55422386-55422405 Msa0648880:five_prime_UTR 20.0%
! GATAAAAATCATAGCTTGAA+GGG + chr4_3:55406768-55406787 None:intergenic 25.0%
! TGATAAAAATCATAGCTTGA+AGG + chr4_3:55406769-55406788 None:intergenic 25.0%
! AGAAGTTGAAAAATGAAGAT+GGG + chr4_3:55406805-55406824 None:intergenic 25.0%
! AAGAAGTTGAAAAATGAAGA+TGG + chr4_3:55406806-55406825 None:intergenic 25.0%
!! AATTTGTGTTCCTAAAGTTT+TGG - chr4_3:55407616-55407635 Msa0648880:three_prime_UTR 25.0%
!! ATTTGTGTTCCTAAAGTTTT+GGG - chr4_3:55407617-55407636 Msa0648880:three_prime_UTR 25.0%
! GATTCTAATCCATTAAACTT+AGG - chr4_3:55407761-55407780 Msa0648880:intron 25.0%
! AGAAAATTGCCTAAGTTTAA+TGG + chr4_3:55407773-55407792 None:intergenic 25.0%
!! CTATATTAATTTTAGACCCT+AGG + chr4_3:55407860-55407879 None:intergenic 25.0%
! AATATAGTATGCATACTATG+GGG - chr4_3:55407873-55407892 Msa0648880:intron 25.0%
!!! AAATAGAACAATTTTGGCTT+TGG + chr4_3:55407960-55407979 None:intergenic 25.0%
! GTTATAATGCAGAAAATTCT+AGG - chr4_3:55408316-55408335 Msa0648880:intron 25.0%
! TGACAAAAAAGCCATTAAAA+CGG - chr4_3:55408349-55408368 Msa0648880:intron 25.0%
!! TAAAACGGTTTAAAATGTTG+GGG - chr4_3:55408364-55408383 Msa0648880:intron 25.0%
! CCATTAATTCTGACAATTAT+TGG + chr4_3:55408685-55408704 None:intergenic 25.0%
! CCAATAATTGTCAGAATTAA+TGG - chr4_3:55408682-55408701 Msa0648880:intron 25.0%
! TTAGTCTCTCAAAAAAAGAA+GGG + chr4_3:55408726-55408745 None:intergenic 25.0%
! AAATGATATCGTATTGTAGT+TGG - chr4_3:55408795-55408814 Msa0648880:intron 25.0%
!!! ATAAAGGTGTTTGTAATTGT+TGG - chr4_3:55408865-55408884 Msa0648880:intron 25.0%
!!! TAAAGGTGTTTGTAATTGTT+GGG - chr4_3:55408866-55408885 Msa0648880:intron 25.0%
! CATTCTTAAAAAGAAGATGA+AGG + chr4_3:55408943-55408962 None:intergenic 25.0%
!! TTGCAGTTGTATTTTTCATT+TGG - chr4_3:55408988-55409007 Msa0648880:intron 25.0%
! ATAAATCCCTCAAAATCAAA+AGG + chr4_3:55409129-55409148 None:intergenic 25.0%
! ACAGGATTAAATTCAAAGAT+CGG + chr4_3:55409152-55409171 None:intergenic 25.0%
!! GAACTTTTAATAATAACCAC+AGG + chr4_3:55409170-55409189 None:intergenic 25.0%
! TATGACAAATACACTCTTAA+TGG + chr4_3:55409250-55409269 None:intergenic 25.0%
! CCATTATCTTAGAATTTGTA+CGG - chr4_3:55409286-55409305 Msa0648880:three_prime_UTR 25.0%
! CATTATCTTAGAATTTGTAC+GGG - chr4_3:55409287-55409306 Msa0648880:three_prime_UTR 25.0%
! GATAATGCATAATATATGCA+AGG - chr4_3:55409344-55409363 Msa0648880:three_prime_UTR 25.0%
!!! TACAAATTCTTTTTTGATGG+TGG + chr4_3:55409389-55409408 None:intergenic 25.0%
! CCATCAAAAAAGAATTTGTA+CGG - chr4_3:55409389-55409408 Msa0648880:three_prime_UTR 25.0%
! CATCAAAAAAGAATTTGTAC+GGG - chr4_3:55409390-55409409 Msa0648880:three_prime_UTR 25.0%
! TCAAAATTTCAGTTCAAATG+AGG - chr4_3:55409450-55409469 Msa0648880:three_prime_UTR 25.0%
! AACTAACCAATTAAGTACAT+GGG + chr4_3:55409742-55409761 None:intergenic 25.0%
! AAACTAACCAATTAAGTACA+TGG + chr4_3:55409743-55409762 None:intergenic 25.0%
! CAATGAAAACAGTTAGAAAA+AGG + chr4_3:55409979-55409998 None:intergenic 25.0%
!! CTTTTTCTAACTGTTTTCAT+TGG - chr4_3:55409977-55409996 Msa0648880:intron 25.0%
! TAAAAAGAGAAAAGGATTAG+AGG - chr4_3:55410086-55410105 Msa0648880:intron 25.0%
! AAATTGTTAGGGTTAATGTT+AGG - chr4_3:55410298-55410317 Msa0648880:intron 25.0%
! AATTGTTAGGGTTAATGTTA+GGG - chr4_3:55410299-55410318 Msa0648880:intron 25.0%
! TTCCTGTTAAAATACAATAG+TGG - chr4_3:55410383-55410402 Msa0648880:intron 25.0%
!!! ATCCACTATTGTATTTTAAC+AGG + chr4_3:55410388-55410407 None:intergenic 25.0%
!!! ATTTATCTCCCTTTTAAAAC+TGG - chr4_3:55410769-55410788 Msa0648880:three_prime_UTR 25.0%
!!! AATATGATTTTTAAGGCTAC+AGG - chr4_3:55410851-55410870 Msa0648880:three_prime_UTR 25.0%
!!! TTTTAAAAGTGATCATGGAA+AGG - chr4_3:55410894-55410913 Msa0648880:three_prime_UTR 25.0%
!! TTTCCCTTATAAAGTGATTT+TGG - chr4_3:55411214-55411233 Msa0648880:intron 25.0%
! CTTTCCAAAATCACTTTATA+AGG + chr4_3:55411221-55411240 None:intergenic 25.0%
! TTGCAATTATATAATTCCAG+AGG - chr4_3:55411344-55411363 Msa0648880:three_prime_UTR 25.0%
! ATTTCTGTAAAACTATGCAA+TGG + chr4_3:55411484-55411503 None:intergenic 25.0%
! AAAGTATGTAACTAGAAAGA+AGG + chr4_3:55411641-55411660 None:intergenic 25.0%
! TCTAGTTACATACTTTATCA+TGG - chr4_3:55411645-55411664 Msa0648880:three_prime_UTR 25.0%
! CTAAAGAAGTTCAATTTCTA+GGG - chr4_3:55411705-55411724 Msa0648880:three_prime_UTR 25.0%
! CTGGAATAAATTGATATTCA+TGG + chr4_3:55411746-55411765 None:intergenic 25.0%
!!! GATATCTCATTTTTAACAGT+TGG + chr4_3:55411774-55411793 None:intergenic 25.0%
! CATAAATATAATCATCAAGG+AGG + chr4_3:55412357-55412376 None:intergenic 25.0%
!!! TGGATCCTAACAATATTTTT+TGG + chr4_3:55413400-55413419 None:intergenic 25.0%
!!! CTCTTGTTATTTAATCCTAA+TGG + chr4_3:55413492-55413511 None:intergenic 25.0%
! CATTAGGATTAAATAACAAG+AGG - chr4_3:55413490-55413509 Msa0648880:intron 25.0%
! TGAAAATACTACGATATAGA+GGG + chr4_3:55413568-55413587 None:intergenic 25.0%
! ATGAAAATACTACGATATAG+AGG + chr4_3:55413569-55413588 None:intergenic 25.0%
!!! GAGTTTAACACAGTTTTTTA+TGG + chr4_3:55413792-55413811 None:intergenic 25.0%
!! ATTATTGTGCTTTTATCGAA+GGG + chr4_3:55413890-55413909 None:intergenic 25.0%
!! AATTATTGTGCTTTTATCGA+AGG + chr4_3:55413891-55413910 None:intergenic 25.0%
! TGAAAGTAACACATACAAAT+GGG + chr4_3:55414113-55414132 None:intergenic 25.0%
! TTGAAAGTAACACATACAAA+TGG + chr4_3:55414114-55414133 None:intergenic 25.0%
! ACTTGAAAAAGTGATTTACT+TGG - chr4_3:55414273-55414292 Msa0648880:intron 25.0%
! CATCTGAAAAACCAATTATT+TGG + chr4_3:55414312-55414331 None:intergenic 25.0%
!!! CAAATAATTGGTTTTTCAGA+TGG - chr4_3:55414310-55414329 Msa0648880:intron 25.0%
! CCAGTAAAAACTGTATAAAT+GGG + chr4_3:55414446-55414465 None:intergenic 25.0%
! TTCATGCTTAGTTATTCTTA+TGG - chr4_3:55414799-55414818 Msa0648880:intron 25.0%
! TGGAAATATTAATTTCATCG+CGG - chr4_3:55414819-55414838 Msa0648880:intron 25.0%
! AACAGAAATGATTTACATGT+AGG - chr4_3:55414945-55414964 Msa0648880:intron 25.0%
! AAATGATTTACATGTAGGTT+TGG - chr4_3:55414950-55414969 Msa0648880:intron 25.0%
!! ATAGTCTTAGAATTTGGATT+GGG + chr4_3:55415318-55415337 None:intergenic 25.0%
!! TGAAGGATAATTTTCCTTTA+TGG + chr4_3:55416071-55416090 None:intergenic 25.0%
!!! AAGTTTGCTTTTTTTAGTCA+AGG + chr4_3:55416124-55416143 None:intergenic 25.0%
! AAAGCAAACTTGCATTAAAA+AGG - chr4_3:55416133-55416152 Msa0648880:intron 25.0%
! GAGCATAATAAGTTATGTTA+TGG + chr4_3:55416203-55416222 None:intergenic 25.0%
!!! GTTTGTTTTTGGAAATCATA+CGG - chr4_3:55416242-55416261 Msa0648880:CDS 25.0%
!!! TTTGTTTTTGGAAATCATAC+GGG - chr4_3:55416243-55416262 Msa0648880:CDS 25.0%
!! CTTCTTTCAAGTGTAAAAAA+AGG - chr4_3:55416316-55416335 Msa0648880:CDS 25.0%
! ATAAAAACCAAGCAATATGT+GGG + chr4_3:55416359-55416378 None:intergenic 25.0%
! AATAAAAACCAAGCAATATG+TGG + chr4_3:55416360-55416379 None:intergenic 25.0%
! TCATAGTCATCATAATTATG+TGG - chr4_3:55416677-55416696 Msa0648880:intron 25.0%
!! ATATTCAAAAGTGGATTTGT+GGG - chr4_3:55417256-55417275 Msa0648880:five_prime_UTR 25.0%
!! TAATCCTATTCTAAAAGGTA+TGG - chr4_3:55417579-55417598 Msa0648880:five_prime_UTR 25.0%
! TGATAAACGCTATATTAAAG+AGG - chr4_3:55417918-55417937 Msa0648880:intron 25.0%
!! AGTTGATGTCAAAAATGATA+AGG - chr4_3:55418041-55418060 Msa0648880:intron 25.0%
! GTTGGATTGAATAATTATCT+GGG + chr4_3:55418182-55418201 None:intergenic 25.0%
! TGTTGGATTGAATAATTATC+TGG + chr4_3:55418183-55418202 None:intergenic 25.0%
!!! TAAATTTGACCTTGCTTTTT+CGG + chr4_3:55418220-55418239 None:intergenic 25.0%
! AAAATCATACATTGATCACT+TGG - chr4_3:55418239-55418258 Msa0648880:intron 25.0%
!!! TTCATATGAAGTGTCATTTA+AGG - chr4_3:55418786-55418805 Msa0648880:intron 25.0%
! AACCATGATAAAGTAGTTAA+TGG - chr4_3:55418880-55418899 Msa0648880:intron 25.0%
!!! ATTGCATTTGTTTTACATTC+AGG - chr4_3:55419102-55419121 Msa0648880:intron 25.0%
!!! TTGCATTTGTTTTACATTCA+GGG - chr4_3:55419103-55419122 Msa0648880:intron 25.0%
! AAGATGCTTATATGAGATAT+TGG - chr4_3:55419431-55419450 Msa0648880:intron 25.0%
! AGATGCTTATATGAGATATT+GGG - chr4_3:55419432-55419451 Msa0648880:intron 25.0%
! TATTATCTGCAATGAAGTTT+GGG - chr4_3:55419497-55419516 Msa0648880:intron 25.0%
!!! AGTTCTAAATAGCTGTTATT+AGG - chr4_3:55419817-55419836 Msa0648880:intron 25.0%
!! GTTCTAAATAGCTGTTATTA+GGG - chr4_3:55419818-55419837 Msa0648880:intron 25.0%
! TTCTAAATAGCTGTTATTAG+GGG - chr4_3:55419819-55419838 Msa0648880:intron 25.0%
! GAAATTATTGAAGAAAACAC+AGG - chr4_3:55420184-55420203 Msa0648880:intron 25.0%
! AATTGTAGTTGAAATCATGT+AGG - chr4_3:55420237-55420256 Msa0648880:intron 25.0%
! TAATGAACTATGCTGAATAA+AGG - chr4_3:55421049-55421068 Msa0648880:intron 25.0%
! AATGAACTATGCTGAATAAA+GGG - chr4_3:55421050-55421069 Msa0648880:intron 25.0%
!!! AATAATTGTTTTGTGGGATT+AGG - chr4_3:55421223-55421242 Msa0648880:intron 25.0%
!! GGATTAGGCTTTTATATTAT+TGG - chr4_3:55421238-55421257 Msa0648880:intron 25.0%
! AATAATGATAGATATCAAGG+TGG - chr4_3:55421838-55421857 Msa0648880:five_prime_UTR 25.0%
! ACTGTTGCTATATTTGATAA+CGG + chr4_3:55422268-55422287 None:intergenic 25.0%
! TTATCAAATATAGCAACAGT+GGG - chr4_3:55422268-55422287 Msa0648880:five_prime_UTR 25.0%
ACAAAAAGTTATAGAGAGAG+AGG - chr4_3:55406690-55406709 Msa0648880:three_prime_UTR 30.0%
CAAAAAGTTATAGAGAGAGA+GGG - chr4_3:55406691-55406710 Msa0648880:three_prime_UTR 30.0%
GTTCAATTTCTTAGGGTTTA+GGG - chr4_3:55406876-55406895 Msa0648880:intron 30.0%
!!! TTGTGGATTGTTTTGGTTTA+TGG - chr4_3:55407065-55407084 Msa0648880:three_prime_UTR 30.0%
!!! TGAGTTTTTTTGTTGTTCAG+TGG - chr4_3:55407115-55407134 Msa0648880:three_prime_UTR 30.0%
TGTTAGGAATGTTTGTGATT+TGG - chr4_3:55407313-55407332 Msa0648880:three_prime_UTR 30.0%
AGAAAACCAAGATTACCTAA+TGG + chr4_3:55407590-55407609 None:intergenic 30.0%
ATGTACAAAAAGGGTGAAAA+GGG - chr4_3:55407655-55407674 Msa0648880:three_prime_UTR 30.0%
TAGTCTCTCAAAAAAATTCC+TGG - chr4_3:55407725-55407744 Msa0648880:intron 30.0%
TTAACAAGGACACATACTAT+AGG + chr4_3:55407819-55407838 None:intergenic 30.0%
TATGGGGATATATTCGAATA+TGG - chr4_3:55407889-55407908 Msa0648880:intron 30.0%
TTATTAATGCCAAAACAACG+AGG - chr4_3:55407917-55407936 Msa0648880:intron 30.0%
ACCATAAATCTGTAGTTTCA+AGG - chr4_3:55408170-55408189 Msa0648880:three_prime_UTR 30.0%
TCCTTGAAACTACAGATTTA+TGG + chr4_3:55408174-55408193 None:intergenic 30.0%
!!! TTTTGTTTCTATTTGTGGAG+CGG - chr4_3:55408398-55408417 Msa0648880:intron 30.0%
AAGAAGGGATTAATCTGAAT+CGG + chr4_3:55408711-55408730 None:intergenic 30.0%
CTTAGTCTCTCAAAAAAAGA+AGG + chr4_3:55408727-55408746 None:intergenic 30.0%
TCTTAAAAAGAAGATGAAGG+AGG + chr4_3:55408940-55408959 None:intergenic 30.0%
TGAAAAATACAACTGCAAGT+AGG + chr4_3:55408986-55409005 None:intergenic 30.0%
GATCTTTGAATTTAATCCTG+TGG - chr4_3:55409151-55409170 Msa0648880:intron 30.0%
! TTGATGCCTCTTATTTATTG+GGG + chr4_3:55409199-55409218 None:intergenic 30.0%
! GTTGATGCCTCTTATTTATT+GGG + chr4_3:55409200-55409219 None:intergenic 30.0%
! AGTTGATGCCTCTTATTTAT+TGG + chr4_3:55409201-55409220 None:intergenic 30.0%
!! CCGTACAAATTCTAAGATAA+TGG + chr4_3:55409289-55409308 None:intergenic 30.0%
!!! AATTCTTTTTTGATGGTGGT+CGG + chr4_3:55409385-55409404 None:intergenic 30.0%
!!! CCGTACAAATTCTTTTTTGA+TGG + chr4_3:55409392-55409411 None:intergenic 30.0%
AACACCAAAACATAGATATG+CGG - chr4_3:55409624-55409643 Msa0648880:three_prime_UTR 30.0%
!!! TAACTGTTTTCTGGCTTTAA+CGG - chr4_3:55409784-55409803 Msa0648880:three_prime_UTR 30.0%
!! TTTTCGAACTTTTAGAGAGA+TGG - chr4_3:55410002-55410021 Msa0648880:intron 30.0%
TTAGAGAGATGGAACATAAA+AGG - chr4_3:55410013-55410032 Msa0648880:intron 30.0%
AGTGGAAGTAAAAAGAGAAA+AGG - chr4_3:55410078-55410097 Msa0648880:intron 30.0%
AATTAAATCCATACGAAGAC+CGG + chr4_3:55410672-55410691 None:intergenic 30.0%
GTCTTCGTATGGATTTAATT+TGG - chr4_3:55410672-55410691 Msa0648880:three_prime_UTR 30.0%
GGCACATTTAATACTAAATG+AGG - chr4_3:55410715-55410734 Msa0648880:three_prime_UTR 30.0%
TTCAATACCAAAGAGAGAAA+TGG + chr4_3:55410831-55410850 None:intergenic 30.0%
!!! TGACGTTTTAAAAGTGATCA+TGG - chr4_3:55410889-55410908 Msa0648880:three_prime_UTR 30.0%
! GCTCAAAAGAGATTATTTCT+TGG + chr4_3:55411025-55411044 None:intergenic 30.0%
TAAGATAAGATGATGTTTCG+AGG + chr4_3:55411131-55411150 None:intergenic 30.0%
AGTTTATGAAAGTCTGGATA+AGG - chr4_3:55411416-55411435 Msa0648880:three_prime_UTR 30.0%
TCTTATGCATCTTTATCTCT+TGG - chr4_3:55411682-55411701 Msa0648880:three_prime_UTR 30.0%
GCTAAAGAAGTTCAATTTCT+AGG - chr4_3:55411704-55411723 Msa0648880:three_prime_UTR 30.0%
TGAGACAAAAGATTTAGATC+AGG + chr4_3:55411936-55411955 None:intergenic 30.0%
TGAATAACCCTACTATCAAA+TGG + chr4_3:55412104-55412123 None:intergenic 30.0%
!! AGGAATTTTCAAGGTTTCAA+AGG - chr4_3:55412129-55412148 Msa0648880:three_prime_UTR 30.0%
TAGAAAAGAGCTTGTAAAAC+AGG - chr4_3:55412280-55412299 Msa0648880:intron 30.0%
!!! ACAGGAAATTTTAAGGCAAA+AGG - chr4_3:55412298-55412317 Msa0648880:intron 30.0%
AGATAAAAAAAGAGATGGAG+AGG - chr4_3:55412418-55412437 Msa0648880:intron 30.0%
ATAAGGGATGCTTATGTTAT+TGG - chr4_3:55412626-55412645 Msa0648880:intron 30.0%
!!! AGTAATTTTAGTTGGGAGTT+GGG + chr4_3:55413260-55413279 None:intergenic 30.0%
!!! TAGTAATTTTAGTTGGGAGT+TGG + chr4_3:55413261-55413280 None:intergenic 30.0%
! GGGTGTTTTATGTAATAAGT+AGG - chr4_3:55413428-55413447 Msa0648880:three_prime_UTR 30.0%
TACGTAGATTATCAGTTAAG+TGG - chr4_3:55413465-55413484 Msa0648880:intron 30.0%
TGATTAATTGTAGGATCCAT+TGG - chr4_3:55413659-55413678 Msa0648880:intron 30.0%
TGATTAATTGTAGGATCCAT+TGG - chr4_3:55413659-55413678 Msa0648880:intron 30.0%
GATTAATTGTAGGATCCATT+GGG - chr4_3:55413660-55413679 Msa0648880:intron 30.0%
AAACCACAAAAAAGAACATC+AGG + chr4_3:55413814-55413833 None:intergenic 30.0%
! TTATTGTGCTTTTATCGAAG+GGG + chr4_3:55413889-55413908 None:intergenic 30.0%
TCTTTCCAAAATCACAAGTA+TGG - chr4_3:55413955-55413974 Msa0648880:intron 30.0%
TTAAAAGCTAGTAATCAAGG+GGG + chr4_3:55413997-55414016 None:intergenic 30.0%
CTTAAAAGCTAGTAATCAAG+GGG + chr4_3:55413998-55414017 None:intergenic 30.0%
CCTTAAAAGCTAGTAATCAA+GGG + chr4_3:55413999-55414018 None:intergenic 30.0%
TCCTTAAAAGCTAGTAATCA+AGG + chr4_3:55414000-55414019 None:intergenic 30.0%
!!! TGATTACTAGCTTTTAAGGA+AGG - chr4_3:55414000-55414019 Msa0648880:intron 30.0%
!!! GATTACTAGCTTTTAAGGAA+GGG - chr4_3:55414001-55414020 Msa0648880:intron 30.0%
TATTTGTATGGTGAATCGTA+TGG - chr4_3:55414063-55414082 Msa0648880:intron 30.0%
!! CTTTTTAACTGTACAGACTT+GGG + chr4_3:55414352-55414371 None:intergenic 30.0%
!! TCTTTTTAACTGTACAGACT+TGG + chr4_3:55414353-55414372 None:intergenic 30.0%
! CCCATTTATACAGTTTTTAC+TGG - chr4_3:55414443-55414462 Msa0648880:intron 30.0%
GCCAGTAAAAACTGTATAAA+TGG + chr4_3:55414447-55414466 None:intergenic 30.0%
! TTTATACAGTTTTTACTGGC+TGG - chr4_3:55414447-55414466 Msa0648880:intron 30.0%
CACAACTTTATATAACCTTG+TGG + chr4_3:55414518-55414537 None:intergenic 30.0%
AGAAAATAAAGTCAGCCATT+TGG + chr4_3:55414630-55414649 None:intergenic 30.0%
TATCACTAAAAAACAAGACC+AGG + chr4_3:55414654-55414673 None:intergenic 30.0%
AAAAAGACTTGATTTCCAAG+TGG + chr4_3:55414709-55414728 None:intergenic 30.0%
!!! AAGGTATTTATTTTATGGCC+CGG + chr4_3:55414766-55414785 None:intergenic 30.0%
GAATAACTAAGCATGAATAC+AGG + chr4_3:55414796-55414815 None:intergenic 30.0%
ATTACCTTTGCTGATATTCT+TGG - chr4_3:55414982-55415001 Msa0648880:intron 30.0%
TATTCCAAGAATATCAGCAA+AGG + chr4_3:55414989-55415008 None:intergenic 30.0%
TTGCTGATATTCTTGGAATA+TGG - chr4_3:55414989-55415008 Msa0648880:intron 30.0%
TAAAGAGAAGACATAACCAA+AGG + chr4_3:55415076-55415095 None:intergenic 30.0%
TTGGTTATGTCTTCTCTTTA+AGG - chr4_3:55415076-55415095 Msa0648880:intron 30.0%
! GATAGTCTTAGAATTTGGAT+TGG + chr4_3:55415319-55415338 None:intergenic 30.0%
AGTAAAGACAAACAATACCT+TGG + chr4_3:55415341-55415360 None:intergenic 30.0%
TTACTCCTTAAACTATTCCT+TGG - chr4_3:55415356-55415375 Msa0648880:intron 30.0%
TCATTGCAAGTATCTATGTT+CGG + chr4_3:55415461-55415480 None:intergenic 30.0%
!! ACTATTTGCTATATACTGTC+AGG - chr4_3:55415774-55415793 Msa0648880:intron 30.0%
!! GGGGTTTTGATATAAGAAAT+TGG - chr4_3:55415806-55415825 Msa0648880:intron 30.0%
TTGATATAAGAAATTGGCAG+CGG - chr4_3:55415812-55415831 Msa0648880:intron 30.0%
GGCATTTAAATCCATTAACA+TGG - chr4_3:55415833-55415852 Msa0648880:intron 30.0%
TTTAAATCCATTAACATGGC+CGG - chr4_3:55415837-55415856 Msa0648880:intron 30.0%
! ATATTCTGTTTCTTCAACTG+AGG + chr4_3:55415901-55415920 None:intergenic 30.0%
TTAAAACAACTAGCGATGAA+TGG + chr4_3:55415968-55415987 None:intergenic 30.0%
! GCATTTTGTGAATTCCATAA+AGG - chr4_3:55416054-55416073 Msa0648880:intron 30.0%
AAATATCACGAAAGTTGTGA+AGG + chr4_3:55416088-55416107 None:intergenic 30.0%
!!! TTGTTTTTGGAAATCATACG+GGG - chr4_3:55416244-55416263 Msa0648880:CDS 30.0%
ATAATTTCTAATCTACGCAG+TGG - chr4_3:55416799-55416818 Msa0648880:intron 30.0%
CTGCAATTTCCAATATATTG+AGG + chr4_3:55416960-55416979 None:intergenic 30.0%
AGAATCAGGATATTCAAAAG+TGG - chr4_3:55417247-55417266 Msa0648880:five_prime_UTR 30.0%
! GATATTCAAAAGTGGATTTG+TGG - chr4_3:55417255-55417274 Msa0648880:five_prime_UTR 30.0%
!! TGAAGATTGTGAAAGTGTTA+TGG - chr4_3:55417309-55417328 Msa0648880:intron 30.0%
AAGTGTTATGGCAAAAGATT+CGG - chr4_3:55417321-55417340 Msa0648880:intron 30.0%
AGCTCAAACAAATACGAAAA+AGG - chr4_3:55417360-55417379 Msa0648880:intron 30.0%
TCAAACAAATACGAAAAAGG+AGG - chr4_3:55417363-55417382 Msa0648880:intron 30.0%
! AAAGGAGGTCTCAAATTTTA+AGG - chr4_3:55417378-55417397 Msa0648880:intron 30.0%
GTTGCTAATCCTATTCTAAA+AGG - chr4_3:55417574-55417593 Msa0648880:five_prime_UTR 30.0%
!!! ACATCCATACCTTTTAGAAT+AGG + chr4_3:55417586-55417605 None:intergenic 30.0%
AAGTCAACAATGAGAAATGA+AGG + chr4_3:55417774-55417793 None:intergenic 30.0%
ATTACATACAGACATACACA+CGG + chr4_3:55417822-55417841 None:intergenic 30.0%
ATAATTACGAGCAATCTTTC+AGG - chr4_3:55417840-55417859 Msa0648880:intron 30.0%
!! TGCTTTAAAGAAACAGATGT+TGG - chr4_3:55417882-55417901 Msa0648880:intron 30.0%
TTGCATGTTCACTTCTAATA+AGG + chr4_3:55418139-55418158 None:intergenic 30.0%
AAGTAACAAATTGCCAGTAT+CGG + chr4_3:55418320-55418339 None:intergenic 30.0%
!! AAAGTTAGAGTTGTTGTTTG+TGG + chr4_3:55418721-55418740 None:intergenic 30.0%
CTCCATTAACTACTTTATCA+TGG + chr4_3:55418885-55418904 None:intergenic 30.0%
AAGTAGTTAATGGAGTAGTT+AGG - chr4_3:55418890-55418909 Msa0648880:intron 30.0%
! ACAATAAATAAGAGTATGGG+TGG - chr4_3:55418924-55418943 Msa0648880:intron 30.0%
TGACACAAGCAAATATTCAA+TGG - chr4_3:55418993-55419012 Msa0648880:intron 30.0%
TCTTCTAACAGATTCTTTGA+AGG + chr4_3:55419212-55419231 None:intergenic 30.0%
GTTAGAAGAAATGTCCAAAA+TGG - chr4_3:55419223-55419242 Msa0648880:intron 30.0%
AAATATTAGCACTGCAATCT+AGG + chr4_3:55419318-55419337 None:intergenic 30.0%
! TTCTGTTTGCATTGATGATT+TGG - chr4_3:55419348-55419367 Msa0648880:intron 30.0%
GTATTATCTGCAATGAAGTT+TGG - chr4_3:55419496-55419515 Msa0648880:intron 30.0%
! AATCCTTTTGTCAGTTATTG+AGG - chr4_3:55419738-55419757 Msa0648880:intron 30.0%
TGGCATAAATTACAGATTAG+TGG - chr4_3:55419924-55419943 Msa0648880:intron 30.0%
AAAGAATACTTGCAATTTGG+TGG - chr4_3:55420073-55420092 Msa0648880:intron 30.0%
TCCAAAAAGAACAAAGAGAT+AGG - chr4_3:55420276-55420295 Msa0648880:intron 30.0%
! TCCTATCTCTTTGTTCTTTT+TGG + chr4_3:55420280-55420299 None:intergenic 30.0%
TGACATTGTAAAATTGCACA+AGG - chr4_3:55420396-55420415 Msa0648880:intron 30.0%
GACATTGTAAAATTGCACAA+GGG - chr4_3:55420397-55420416 Msa0648880:intron 30.0%
! TCACTGATAGTGTTTAACTA+TGG - chr4_3:55420470-55420489 Msa0648880:intron 30.0%
! AGTGTTTAACTATGGATTGT+AGG - chr4_3:55420478-55420497 Msa0648880:intron 30.0%
TAGTAAAACTGGAATTGTTG+TGG - chr4_3:55420999-55421018 Msa0648880:intron 30.0%
GCATAGTTCATTATCAAAGT+AGG + chr4_3:55421042-55421061 None:intergenic 30.0%
ACTACACTCTTCTTTAGATA+TGG + chr4_3:55421195-55421214 None:intergenic 30.0%
!! TGGAAGCAATAATTGTTTTG+TGG - chr4_3:55421216-55421235 Msa0648880:intron 30.0%
!! GGAAGCAATAATTGTTTTGT+GGG - chr4_3:55421217-55421236 Msa0648880:intron 30.0%
TACGGATACAAGAAGTTATA+TGG + chr4_3:55421290-55421309 None:intergenic 30.0%
!! TAATGGAAGCTTCTGAAATA+CGG + chr4_3:55421308-55421327 None:intergenic 30.0%
AGAAGACAATGCTAGAAATT+CGG - chr4_3:55421744-55421763 Msa0648880:five_prime_UTR 30.0%
TCCTGTTCTATTAAGTTATC+AGG + chr4_3:55421877-55421896 None:intergenic 30.0%
GTGGAAGATTATATAATTGG+AGG - chr4_3:55421982-55422001 Msa0648880:five_prime_UTR 30.0%
TTATATAATTGGAGGAGACT+CGG - chr4_3:55421990-55422009 Msa0648880:five_prime_UTR 30.0%
GTACAACAAAGAAGAAAATG+AGG - chr4_3:55422020-55422039 Msa0648880:five_prime_UTR 30.0%
TTGTTTAGTAATGCAGGAAT+AGG - chr4_3:55422144-55422163 Msa0648880:five_prime_UTR 30.0%
ATTATGTATGCTGCTAATAC+TGG - chr4_3:55422224-55422243 Msa0648880:five_prime_UTR 30.0%
GTTATCAAATATAGCAACAG+TGG - chr4_3:55422267-55422286 Msa0648880:five_prime_UTR 30.0%
TTCTCAATACTATATAACGC+TGG - chr4_3:55422303-55422322 Msa0648880:five_prime_UTR 30.0%
!! TTGGTTAGATTTTGGGGAAT+GGG + chr4_3:55406649-55406668 None:intergenic 35.0%
!! TGTGTGGTTGGTTAGATTTT+GGG + chr4_3:55406656-55406675 None:intergenic 35.0%
!! ATGTGTGGTTGGTTAGATTT+TGG + chr4_3:55406657-55406676 None:intergenic 35.0%
! TTCGTGTGATTTTCGTTACT+GGG - chr4_3:55406824-55406843 Msa0648880:intron 35.0%
! GTTGCTTCTACTGTAGATTT+TGG - chr4_3:55406846-55406865 Msa0648880:intron 35.0%
!!! TACTGTAGATTTTGGTTGCT+GGG - chr4_3:55406854-55406873 Msa0648880:intron 35.0%
TTGCTGGGTTCAATTTCTTA+GGG - chr4_3:55406869-55406888 Msa0648880:intron 35.0%
GGTTCAATTTCTTAGGGTTT+AGG - chr4_3:55406875-55406894 Msa0648880:intron 35.0%
TATCACTTCATCTTCAGCTA+TGG - chr4_3:55406901-55406920 Msa0648880:three_prime_UTR 35.0%
AGATAGAAGCTACTGATGTT+AGG - chr4_3:55407297-55407316 Msa0648880:three_prime_UTR 35.0%
!! GTGATTTGGTTTCTGAATTG+AGG - chr4_3:55407327-55407346 Msa0648880:three_prime_UTR 35.0%
GAACTACTACTATCCATTTC+AGG + chr4_3:55407431-55407450 None:intergenic 35.0%
CATTTGTGGAAAGTCAGTTA+GGG - chr4_3:55407492-55407511 Msa0648880:three_prime_UTR 35.0%
ATTTGTGGAAAGTCAGTTAG+GGG - chr4_3:55407493-55407512 Msa0648880:three_prime_UTR 35.0%
ATAGGTCCATCATCTCTTAT+CGG + chr4_3:55407521-55407540 None:intergenic 35.0%
TCAAATTCCATCCCAAGAAT+AGG + chr4_3:55407539-55407558 None:intergenic 35.0%
! TCACCCTTTTTGTACATCAA+GGG + chr4_3:55407652-55407671 None:intergenic 35.0%
! TTCACCCTTTTTGTACATCA+AGG + chr4_3:55407653-55407672 None:intergenic 35.0%
GATGTACAAAAAGGGTGAAA+AGG - chr4_3:55407654-55407673 Msa0648880:three_prime_UTR 35.0%
! TTTAGTTCACATTCTAGCCT+AGG - chr4_3:55407840-55407859 Msa0648880:intron 35.0%
TTAGTTCACATTCTAGCCTA+GGG - chr4_3:55407841-55407860 Msa0648880:intron 35.0%
AGAGAAAGAGAAAGAGAAAG+AGG - chr4_3:55408255-55408274 Msa0648880:intron 35.0%
!! TGGGTAATGGATTGAGATAA+AGG - chr4_3:55408849-55408868 Msa0648880:intron 35.0%
TTGTAGAAACTGCAAGAGTT+TGG - chr4_3:55408889-55408908 Msa0648880:intron 35.0%
AAATACAACTGCAAGTAGGT+AGG + chr4_3:55408982-55409001 None:intergenic 35.0%
CAACTAAATTGCTGCTATAC+AGG + chr4_3:55409014-55409033 None:intergenic 35.0%
!!! TCTCAAGCCTTTTGATTTTG+AGG - chr4_3:55409119-55409138 Msa0648880:intron 35.0%
!!! CTCAAGCCTTTTGATTTTGA+GGG - chr4_3:55409120-55409139 Msa0648880:intron 35.0%
! TGATGCCTCTTATTTATTGG+GGG + chr4_3:55409198-55409217 None:intergenic 35.0%
!! AGAGGCATCAACTTAATATG+TGG - chr4_3:55409208-55409227 Msa0648880:intron 35.0%
AAATACACTCTTAATGGCCA+CGG + chr4_3:55409244-55409263 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr4_3:55409349-55409368 Msa0648880:three_prime_UTR 35.0%
!!! ATTCTTTTTTGATGGTGGTC+GGG + chr4_3:55409384-55409403 None:intergenic 35.0%
AGAATTGAAGTAGTCAATCC+CGG - chr4_3:55409480-55409499 Msa0648880:three_prime_UTR 35.0%
! TTCACCGCATATCTATGTTT+TGG + chr4_3:55409631-55409650 None:intergenic 35.0%
CATAGATATGCGGTGAAATA+AGG - chr4_3:55409634-55409653 Msa0648880:three_prime_UTR 35.0%
TGTTAAATTCCTGCACTGTT+TGG - chr4_3:55409679-55409698 Msa0648880:three_prime_UTR 35.0%
! GCTTTTCCCATGTACTTAAT+TGG - chr4_3:55409733-55409752 Msa0648880:three_prime_UTR 35.0%
!!! AACTGTTTTCTGGCTTTAAC+GGG - chr4_3:55409785-55409804 Msa0648880:three_prime_UTR 35.0%
!! TTTCTCACTTTTCACTGCAT+CGG + chr4_3:55410209-55410228 None:intergenic 35.0%
AAAAGTGAGAAAGGACGTTA+GGG - chr4_3:55410217-55410236 Msa0648880:intron 35.0%
AGTGAGAAGAGAGAAAGAAT+TGG - chr4_3:55410254-55410273 Msa0648880:intron 35.0%
TGAGAAGAGGGAAATTGTTA+GGG - chr4_3:55410287-55410306 Msa0648880:intron 35.0%
!!! TGCCAAGACCAGTTTTAAAA+GGG + chr4_3:55410780-55410799 None:intergenic 35.0%
!!! ATGCCAAGACCAGTTTTAAA+AGG + chr4_3:55410781-55410800 None:intergenic 35.0%
TTTGCATAACATGTTGCAGT+TGG - chr4_3:55411285-55411304 Msa0648880:three_prime_UTR 35.0%
TTATATAATTCCAGAGGCAG+TGG - chr4_3:55411350-55411369 Msa0648880:three_prime_UTR 35.0%
GATAGATGTAGTAACTCTCT+CGG + chr4_3:55411796-55411815 None:intergenic 35.0%
!! ATCCACTTTAGTTCTCTTGA+TGG - chr4_3:55411813-55411832 Msa0648880:three_prime_UTR 35.0%
GAATCTGCACATAATGTGTA+TGG - chr4_3:55411891-55411910 Msa0648880:three_prime_UTR 35.0%
CAAGAGTTACATCGACAAAT+GGG + chr4_3:55412031-55412050 None:intergenic 35.0%
TCAAGAGTTACATCGACAAA+TGG + chr4_3:55412032-55412051 None:intergenic 35.0%
TACTATCAAATGGCACTAGA+CGG + chr4_3:55412094-55412113 None:intergenic 35.0%
!! TCTAGTGCCATTTGATAGTA+GGG - chr4_3:55412094-55412113 Msa0648880:three_prime_UTR 35.0%
TGATAGTAGGGTTATTCATG+AGG - chr4_3:55412106-55412125 Msa0648880:three_prime_UTR 35.0%
! TTCATGAGGAGGAATTTTCA+AGG - chr4_3:55412120-55412139 Msa0648880:three_prime_UTR 35.0%
CTCTAGTGATAAAGCATGTT+GGG + chr4_3:55412182-55412201 None:intergenic 35.0%
ACTCTAGTGATAAAGCATGT+TGG + chr4_3:55412183-55412202 None:intergenic 35.0%
AACATGCTTTATCACTAGAG+TGG - chr4_3:55412182-55412201 Msa0648880:three_prime_UTR 35.0%
!! GGCTTATTTTCAGAATGAAG+AGG - chr4_3:55412217-55412236 Msa0648880:three_prime_UTR 35.0%
!!! AATTTTAAGGCAAAAGGTGC+TGG - chr4_3:55412304-55412323 Msa0648880:intron 35.0%
GGAGCAGATAAAAAAAGAGA+TGG - chr4_3:55412413-55412432 Msa0648880:intron 35.0%
! GATCAGAGTGATTGGTAATT+TGG + chr4_3:55412594-55412613 None:intergenic 35.0%
TGATCTGTCGTGTGAAAATA+AGG - chr4_3:55412609-55412628 Msa0648880:intron 35.0%
GATCTGTCGTGTGAAAATAA+GGG - chr4_3:55412610-55412629 Msa0648880:intron 35.0%
GAATTAGCTGCATCAAAGAA+GGG - chr4_3:55412799-55412818 Msa0648880:intron 35.0%
AATTAGCTGCATCAAAGAAG+GGG - chr4_3:55412800-55412819 Msa0648880:intron 35.0%
CTACGAAACTATGCAAAATC+TGG - chr4_3:55412846-55412865 Msa0648880:intron 35.0%
! CAAAATCTGGAATCATATCG+AGG - chr4_3:55412859-55412878 Msa0648880:intron 35.0%
ATCGTCTATCAGTTTCCTAA+AGG - chr4_3:55412942-55412961 Msa0648880:intron 35.0%
TTCCTAAAGGTTGTACAGTT+CGG - chr4_3:55412955-55412974 Msa0648880:intron 35.0%
GGGACTGTTATATTAGATTC+TGG + chr4_3:55413240-55413259 None:intergenic 35.0%
GTGTATCTCACTTGTAAGAT+AGG + chr4_3:55413314-55413333 None:intergenic 35.0%
TTGTTAGGATCCAATATGAG+AGG - chr4_3:55413407-55413426 Msa0648880:three_prime_UTR 35.0%
TGTTAGGATCCAATATGAGA+GGG - chr4_3:55413408-55413427 Msa0648880:three_prime_UTR 35.0%
CATAAAACACCCTCTCATAT+TGG + chr4_3:55413420-55413439 None:intergenic 35.0%
GTGTTCGGTTGATTAATTGT+AGG - chr4_3:55413650-55413669 Msa0648880:intron 35.0%
!!! CAGTTTTTTATGGGAACCAA+TGG + chr4_3:55413678-55413697 None:intergenic 35.0%
GTGTTCGGTTGATTAATTGT+AGG - chr4_3:55413650-55413669 Msa0648880:intron 35.0%
!!! AGTTTTTTATGGGAACCCAA+TGG + chr4_3:55413781-55413800 None:intergenic 35.0%
!!! ACTCCTGATGTTCTTTTTTG+TGG - chr4_3:55413808-55413827 Msa0648880:intron 35.0%
AGGGGTCTTAAATATAGCAA+CGG + chr4_3:55413871-55413890 None:intergenic 35.0%
! TAGAGCCATACTTGTGATTT+TGG + chr4_3:55413963-55413982 None:intergenic 35.0%
TAAAAGCTAGTAATCAAGGG+GGG + chr4_3:55413996-55414015 None:intergenic 35.0%
!!! CCCTTGATTACTAGCTTTTA+AGG - chr4_3:55413996-55414015 Msa0648880:intron 35.0%
GCAGATCCATTTAATCTAAG+GGG + chr4_3:55414165-55414184 None:intergenic 35.0%
GGCAGATCCATTTAATCTAA+GGG + chr4_3:55414166-55414185 None:intergenic 35.0%
TGGCAGATCCATTTAATCTA+AGG + chr4_3:55414167-55414186 None:intergenic 35.0%
GAATGTTGGAAATCTTCTGA+TGG - chr4_3:55414408-55414427 Msa0648880:intron 35.0%
!! AGTTTTTACTGGCTGGTTAA+TGG - chr4_3:55414454-55414473 Msa0648880:intron 35.0%
!! GTTTTTACTGGCTGGTTAAT+GGG - chr4_3:55414455-55414474 Msa0648880:intron 35.0%
!!! TGGTTTTATTACTGCCTGAA+AGG - chr4_3:55414492-55414511 Msa0648880:intron 35.0%
TGTATTCTGTAACCTCTTAC+CGG - chr4_3:55414744-55414763 Msa0648880:intron 35.0%
CATGAATACAGGCTAAATCA+AGG + chr4_3:55414785-55414804 None:intergenic 35.0%
TGATTTACATGTAGGTTTGG+AGG - chr4_3:55414953-55414972 Msa0648880:intron 35.0%
ATAAGCTCATCCAACGTAAA+TGG + chr4_3:55415015-55415034 None:intergenic 35.0%
AGACTTTATAAACACCACAC+AGG + chr4_3:55415250-55415269 None:intergenic 35.0%
TGTGTGGTGTTTATAAAGTC+TGG - chr4_3:55415249-55415268 Msa0648880:intron 35.0%
GTGTGGTGTTTATAAAGTCT+GGG - chr4_3:55415250-55415269 Msa0648880:intron 35.0%
CTAACTCAACCTTACGAAAA+CGG + chr4_3:55415294-55415313 None:intergenic 35.0%
! CCTTGGATAGTCTTAGAATT+TGG + chr4_3:55415324-55415343 None:intergenic 35.0%
!! CCAAATTCTAAGACTATCCA+AGG - chr4_3:55415321-55415340 Msa0648880:intron 35.0%
TCATTACGAAAATTGTCTCC+TGG + chr4_3:55415427-55415446 None:intergenic 35.0%
! CAATTTTCGTAATGATACCC+TGG - chr4_3:55415432-55415451 Msa0648880:intron 35.0%
ATTGCAAGTATCTATGTTCG+GGG + chr4_3:55415459-55415478 None:intergenic 35.0%
CATTGCAAGTATCTATGTTC+GGG + chr4_3:55415460-55415479 None:intergenic 35.0%
!!! CTAACAGTGCGTTTTGAAAA+TGG - chr4_3:55415504-55415523 Msa0648880:intron 35.0%
TTACAGGACCCTAGAATATT+AGG - chr4_3:55415547-55415566 Msa0648880:intron 35.0%
GGATCTCACCTAATATTCTA+GGG + chr4_3:55415558-55415577 None:intergenic 35.0%
TGGATCTCACCTAATATTCT+AGG + chr4_3:55415559-55415578 None:intergenic 35.0%
GAAGAAACAGAATATTGAGC+AGG - chr4_3:55415906-55415925 Msa0648880:intron 35.0%
!!! TTTTTAGTCAAGGCATTGGT+TGG + chr4_3:55416114-55416133 None:intergenic 35.0%
!!! GCTTTTTTTAGTCAAGGCAT+TGG + chr4_3:55416118-55416137 None:intergenic 35.0%
CACCAATAAGTATGATGTCA+GGG + chr4_3:55416271-55416290 None:intergenic 35.0%
!! TGTAGATGTGCCATTTGTAT+TGG - chr4_3:55416425-55416444 Msa0648880:intron 35.0%
AAAGGGATGTTGAACGAAAT+GGG - chr4_3:55416557-55416576 Msa0648880:CDS 35.0%
!! TTTTATTTGGTTCCAAGTGC+AGG - chr4_3:55416759-55416778 Msa0648880:CDS 35.0%
! TGTTGCTATTATGCAAGAGA+AGG - chr4_3:55416840-55416859 Msa0648880:intron 35.0%
! GTTGCTATTATGCAAGAGAA+GGG - chr4_3:55416841-55416860 Msa0648880:intron 35.0%
AAACGATGTTTATGCCTTCT+TGG + chr4_3:55416877-55416896 None:intergenic 35.0%
TTTCCAATATATTGAGGCCT+CGG + chr4_3:55416954-55416973 None:intergenic 35.0%
! CCTTGTCTTATTCATTGTCT+CGG - chr4_3:55417006-55417025 Msa0648880:CDS 35.0%
! CTTGTCTTATTCATTGTCTC+GGG - chr4_3:55417007-55417026 Msa0648880:CDS 35.0%
TATAGCTTCTGCTTTGTCTA+GGG - chr4_3:55417120-55417139 Msa0648880:five_prime_UTR 35.0%
GGGATACAGAACTATTTGAA+AGG - chr4_3:55417140-55417159 Msa0648880:five_prime_UTR 35.0%
TGTACGACCTGTATATAGAA+AGG - chr4_3:55417183-55417202 Msa0648880:five_prime_UTR 35.0%
AAATTGCTTCAGAATCAGCT+GGG + chr4_3:55417210-55417229 None:intergenic 35.0%
AAAATTGCTTCAGAATCAGC+TGG + chr4_3:55417211-55417230 None:intergenic 35.0%
! GATTCGGAGATTGATGATTT+AGG - chr4_3:55417337-55417356 Msa0648880:intron 35.0%
CAAACACTGTCATGAGAAAT+GGG - chr4_3:55417410-55417429 Msa0648880:intron 35.0%
! TTAGGATCAACTGTTGATGA+AGG - chr4_3:55417493-55417512 Msa0648880:five_prime_UTR 35.0%
!! TCTTGTTGCTTTGATTACTG+TGG - chr4_3:55417693-55417712 Msa0648880:intron 35.0%
TTGATTACTGTGGCAAATGA+AGG - chr4_3:55417703-55417722 Msa0648880:intron 35.0%
!! TCTCATTGTTGACTTGTGTT+TGG - chr4_3:55417779-55417798 Msa0648880:intron 35.0%
ACACGGAGTAGTAATTTCTA+AGG + chr4_3:55417805-55417824 None:intergenic 35.0%
! ATTCTTGTTTCCCAAACATG+AGG + chr4_3:55417968-55417987 None:intergenic 35.0%
! AATGATGGAAATGTAACAGC+TGG + chr4_3:55417994-55418013 None:intergenic 35.0%
AGCTGTTACATTTCCATCAT+TGG - chr4_3:55417993-55418012 Msa0648880:intron 35.0%
GCTGTTACATTTCCATCATT+GGG - chr4_3:55417994-55418013 Msa0648880:intron 35.0%
CTGTTACATTTCCATCATTG+GGG - chr4_3:55417995-55418014 Msa0648880:intron 35.0%
TGTTACATTTCCATCATTGG+GGG - chr4_3:55417996-55418015 Msa0648880:intron 35.0%
TGACATCAACTGTATGCAAT+GGG + chr4_3:55418032-55418051 None:intergenic 35.0%
TTGACATCAACTGTATGCAA+TGG + chr4_3:55418033-55418052 None:intergenic 35.0%
TGAACAGATAAATGCACTAC+AGG - chr4_3:55418089-55418108 Msa0648880:intron 35.0%
TCTAATAAGGAATTCTGCAG+AGG + chr4_3:55418126-55418145 None:intergenic 35.0%
CAAAGTCAAGATTGTTCTAC+TGG - chr4_3:55418156-55418175 Msa0648880:intron 35.0%
CGGCAGTATATATAGATTGT+TGG + chr4_3:55418200-55418219 None:intergenic 35.0%
TATATACTGCCGAAAAAGCA+AGG - chr4_3:55418208-55418227 Msa0648880:intron 35.0%
ATCATACATTGATCACTTGG+CGG - chr4_3:55418242-55418261 Msa0648880:intron 35.0%
ATGTATAGATCATTGCCTCT+TGG - chr4_3:55418276-55418295 Msa0648880:intron 35.0%
TAATCTGCTCCATGATGATT+GGG + chr4_3:55418541-55418560 None:intergenic 35.0%
ATAATCTGCTCCATGATGAT+TGG + chr4_3:55418542-55418561 None:intergenic 35.0%
! GACCACAATAGATTGGTAAT+GGG + chr4_3:55418661-55418680 None:intergenic 35.0%
TGACCACAATAGATTGGTAA+TGG + chr4_3:55418662-55418681 None:intergenic 35.0%
ATTAGTGTCTTGCAAATGCA+AGG + chr4_3:55418698-55418717 None:intergenic 35.0%
! ACTCTAACTTTTACACCTTG+TGG - chr4_3:55418730-55418749 Msa0648880:intron 35.0%
TAGCATTCATGAGAATGAAG+GGG + chr4_3:55418758-55418777 None:intergenic 35.0%
GTAGCATTCATGAGAATGAA+GGG + chr4_3:55418759-55418778 None:intergenic 35.0%
AGTAGCATTCATGAGAATGA+AGG + chr4_3:55418760-55418779 None:intergenic 35.0%
TAGTTAATGGAGTAGTTAGG+TGG - chr4_3:55418893-55418912 Msa0648880:intron 35.0%
AGTTAATGGAGTAGTTAGGT+GGG - chr4_3:55418894-55418913 Msa0648880:intron 35.0%
! GCATAATCATCTCACCATTT+TGG + chr4_3:55419240-55419259 None:intergenic 35.0%
GGTGAGATGATTATGCAAAA+AGG - chr4_3:55419244-55419263 Msa0648880:intron 35.0%
CATCAATGCAAACAGAAGTA+GGG + chr4_3:55419345-55419364 None:intergenic 35.0%
TCATCAATGCAAACAGAAGT+AGG + chr4_3:55419346-55419365 None:intergenic 35.0%
! AGTGGCATCAACATCTTTTA+TGG - chr4_3:55419378-55419397 Msa0648880:intron 35.0%
! ACATCTTTTATGGTTCAGCT+TGG - chr4_3:55419388-55419407 Msa0648880:intron 35.0%
! GATATTGGGACTTTGAGAAA+TGG - chr4_3:55419446-55419465 Msa0648880:intron 35.0%
! CTTCTCATATGTGATTTGTG+CGG - chr4_3:55419541-55419560 Msa0648880:intron 35.0%
! GACTAGTACTGAAAGTTCTA+TGG + chr4_3:55419606-55419625 None:intergenic 35.0%
AGAACTTTCAGTACTAGTCA+AGG - chr4_3:55419607-55419626 Msa0648880:intron 35.0%
GAACTTTCAGTACTAGTCAA+GGG - chr4_3:55419608-55419627 Msa0648880:intron 35.0%
ATTCATCCTCTTCTTCAACA+AGG - chr4_3:55419701-55419720 Msa0648880:intron 35.0%
TCACCTCAATAACTGACAAA+AGG + chr4_3:55419744-55419763 None:intergenic 35.0%
ATGTTAAGTCGTCACATTAG+AGG + chr4_3:55419851-55419870 None:intergenic 35.0%
ATATTTACATTGGACTTGGG+TGG - chr4_3:55420045-55420064 Msa0648880:intron 35.0%
! ATTTGGTGGCTATTACAAGT+AGG - chr4_3:55420087-55420106 Msa0648880:intron 35.0%
! TTTGGTGGCTATTACAAGTA+GGG - chr4_3:55420088-55420107 Msa0648880:intron 35.0%
AATGTGATAGCTGAAAACAC+AGG - chr4_3:55420134-55420153 Msa0648880:intron 35.0%
ACAGGAATTATGACTATTGC+AGG - chr4_3:55420152-55420171 Msa0648880:intron 35.0%
GTAGTTGAAATCATGTAGGA+AGG - chr4_3:55420241-55420260 Msa0648880:intron 35.0%
! CTTTGTTCTTTTTGGACTGT+GGG + chr4_3:55420272-55420291 None:intergenic 35.0%
! TCTTTGTTCTTTTTGGACTG+TGG + chr4_3:55420273-55420292 None:intergenic 35.0%
ACATTCTGCAGGTTATAATC+TGG - chr4_3:55420594-55420613 Msa0648880:intron 35.0%
ACAGAGCAAACATATAATGC+AGG + chr4_3:55420695-55420714 None:intergenic 35.0%
TGTGACAATGTCATTGACAA+TGG + chr4_3:55420727-55420746 None:intergenic 35.0%
! ATCTTAGATGTTGACTGCAT+TGG - chr4_3:55420750-55420769 Msa0648880:intron 35.0%
TGCTATAAAACGTGAGTATC+TGG - chr4_3:55420777-55420796 Msa0648880:intron 35.0%
TGTCTCCCTAATGATATCAT+AGG - chr4_3:55420853-55420872 Msa0648880:intron 35.0%
CACCACCTATGATATCATTA+GGG + chr4_3:55420861-55420880 None:intergenic 35.0%
TCACCACCTATGATATCATT+AGG + chr4_3:55420862-55420881 None:intergenic 35.0%
AAAAGATACCTGTTCTTCCA+TGG - chr4_3:55420881-55420900 Msa0648880:intron 35.0%
AAAGATACCTGTTCTTCCAT+GGG - chr4_3:55420882-55420901 Msa0648880:intron 35.0%
ACCAAGAAGGATAGTAAAAC+TGG - chr4_3:55420988-55421007 Msa0648880:intron 35.0%
! TCCAGTTTTACTATCCTTCT+TGG + chr4_3:55420992-55421011 None:intergenic 35.0%
TTATCAAAGTAGGAGAACAG+AGG + chr4_3:55421032-55421051 None:intergenic 35.0%
GCAACCAATTCTAATATCCT+AGG + chr4_3:55421173-55421192 None:intergenic 35.0%
! ATCTAAAGAAGAGTGTAGTG+TGG - chr4_3:55421196-55421215 Msa0648880:intron 35.0%
!! TTGGCGGCAGAATATTTTAA+TGG + chr4_3:55421325-55421344 None:intergenic 35.0%
!! ACGGTATGCTTAGTCTTAAT+TGG + chr4_3:55421379-55421398 None:intergenic 35.0%
TAAGCATACCGTAAAGAACT+GGG - chr4_3:55421387-55421406 Msa0648880:intron 35.0%
AGATCACAAGGAATAGTTAC+TGG - chr4_3:55421487-55421506 Msa0648880:five_prime_UTR 35.0%
AGGAAAGAAGGAAGATTACT+TGG - chr4_3:55421553-55421572 Msa0648880:five_prime_UTR 35.0%
AAGAAGGAAGATTACTTGGA+TGG - chr4_3:55421557-55421576 Msa0648880:five_prime_UTR 35.0%
ACTAGTGATCACATCTATCT+TGG + chr4_3:55421653-55421672 None:intergenic 35.0%
TAGATGTGATCACTAGTGAA+AGG - chr4_3:55421656-55421675 Msa0648880:five_prime_UTR 35.0%
AGATGTGATCACTAGTGAAA+GGG - chr4_3:55421657-55421676 Msa0648880:five_prime_UTR 35.0%
! TCAACTCCGTGATATCTTTT+GGG + chr4_3:55421687-55421706 None:intergenic 35.0%
ATATGAAGATGATCTTCGTC+AGG - chr4_3:55421777-55421796 Msa0648880:five_prime_UTR 35.0%
AAGAGATAAGTGTGATTTCG+TGG - chr4_3:55421804-55421823 Msa0648880:five_prime_UTR 35.0%
! AGATATCAAGGTGGATTTAG+TGG - chr4_3:55421847-55421866 Msa0648880:five_prime_UTR 35.0%
! GATATCAAGGTGGATTTAGT+GGG - chr4_3:55421848-55421867 Msa0648880:five_prime_UTR 35.0%
GCCTGATAACTTAATAGAAC+AGG - chr4_3:55421873-55421892 Msa0648880:intron 35.0%
TCAATGACGACGGAAAATAT+GGG - chr4_3:55421944-55421963 Msa0648880:intron 35.0%
TTAATCACTGTAACCAGATG+AGG + chr4_3:55422067-55422086 None:intergenic 35.0%
!! GTTGGTTAGATTTTGGGGAA+TGG + chr4_3:55406650-55406669 None:intergenic 40.0%
!! GTGTGGTTGGTTAGATTTTG+GGG + chr4_3:55406655-55406674 None:intergenic 40.0%
GAGTGATTAAGATGTGTGGT+TGG + chr4_3:55406668-55406687 None:intergenic 40.0%
GTGAGAGTGATTAAGATGTG+TGG + chr4_3:55406672-55406691 None:intergenic 40.0%
ATAGAGAGAGAGGGATAGTT+AGG - chr4_3:55406700-55406719 Msa0648880:three_prime_UTR 40.0%
TAGAGAGAGAGGGATAGTTA+GGG - chr4_3:55406701-55406720 Msa0648880:three_prime_UTR 40.0%
! CTTCGTGTGATTTTCGTTAC+TGG - chr4_3:55406823-55406842 Msa0648880:intron 40.0%
!!! CTACTGTAGATTTTGGTTGC+TGG - chr4_3:55406853-55406872 Msa0648880:intron 40.0%
GTTGCTGGGTTCAATTTCTT+AGG - chr4_3:55406868-55406887 Msa0648880:intron 40.0%
TGAGAACAAGAACAAGCCAT+TGG - chr4_3:55406943-55406962 Msa0648880:three_prime_UTR 40.0%
! ACTTTGTTGTCTTCCTCCAA+TGG + chr4_3:55406962-55406981 None:intergenic 40.0%
AAAGAAGACTCCTTCACAGT+TGG - chr4_3:55406991-55407010 Msa0648880:three_prime_UTR 40.0%
TCAAGAATCTCCAACTGTGA+AGG + chr4_3:55407004-55407023 None:intergenic 40.0%
GTTTCTGAATTGAGGCCAAT+TGG - chr4_3:55407335-55407354 Msa0648880:three_prime_UTR 40.0%
GCATTTGTGGAAAGTCAGTT+AGG - chr4_3:55407491-55407510 Msa0648880:three_prime_UTR 40.0%
!! AGAGATGATGGACCTATTCT+TGG - chr4_3:55407524-55407543 Msa0648880:three_prime_UTR 40.0%
!! GAGATGATGGACCTATTCTT+GGG - chr4_3:55407525-55407544 Msa0648880:three_prime_UTR 40.0%
GAATTTGATTCTTTGCCGCT+GGG - chr4_3:55407551-55407570 Msa0648880:three_prime_UTR 40.0%
! CCTTTTTGTACATCAAGGGT+GGG + chr4_3:55407648-55407667 None:intergenic 40.0%
CCACCCTTGATGTACAAAAA+GGG - chr4_3:55407646-55407665 Msa0648880:three_prime_UTR 40.0%
GAATCGACAAAAAAAGCTCC+AGG + chr4_3:55407746-55407765 None:intergenic 40.0%
! TTTCGATCACCTCGTTGTTT+TGG + chr4_3:55407929-55407948 None:intergenic 40.0%
TAGTTGTCAATGCGGAAATG+CGG - chr4_3:55408011-55408030 Msa0648880:three_prime_UTR 40.0%
GGGTAGAGAGAAATAGAAAG+AGG - chr4_3:55408286-55408305 Msa0648880:intron 40.0%
!! TTTGGGGTTTTATGCAGAGT+TGG - chr4_3:55408772-55408791 Msa0648880:intron 40.0%
AGTTGCGAAGAATCAAACGA+GGG - chr4_3:55408820-55408839 Msa0648880:intron 40.0%
! AATCAAACGAGGGTGCATTT+GGG - chr4_3:55408830-55408849 Msa0648880:intron 40.0%
! CTCTTATTTATTGGGGGAAC+AGG + chr4_3:55409192-55409211 None:intergenic 40.0%
CTGTTCCCCCAATAAATAAG+AGG - chr4_3:55409190-55409209 Msa0648880:intron 40.0%
GCATAATATATGCAAGGTCC+GGG - chr4_3:55409350-55409369 Msa0648880:three_prime_UTR 40.0%
CATAATATATGCAAGGTCCG+GGG - chr4_3:55409351-55409370 Msa0648880:three_prime_UTR 40.0%
!!! TTCTTTTTTGATGGTGGTCG+GGG + chr4_3:55409383-55409402 None:intergenic 40.0%
! CTCATGCTATCCAACTTTTG+GGG + chr4_3:55409527-55409546 None:intergenic 40.0%
! GCTCATGCTATCCAACTTTT+GGG + chr4_3:55409528-55409547 None:intergenic 40.0%
! AAGCAAATGCCAAGAGGTTT+TGG + chr4_3:55409717-55409736 None:intergenic 40.0%
ACAACCTCTTGTGTAGAAAC+AGG - chr4_3:55409872-55409891 Msa0648880:three_prime_UTR 40.0%
CAACCTCTTGTGTAGAAACA+GGG - chr4_3:55409873-55409892 Msa0648880:three_prime_UTR 40.0%
!! TTACCCTGTTTCTACACAAG+AGG + chr4_3:55409879-55409898 None:intergenic 40.0%
TCTTGTGTAGAAACAGGGTA+AGG - chr4_3:55409878-55409897 Msa0648880:intron 40.0%
GCTGCTTACAATACACCAAA+TGG - chr4_3:55409900-55409919 Msa0648880:intron 40.0%
GCTTACAATACACCAAATGG+TGG - chr4_3:55409903-55409922 Msa0648880:intron 40.0%
GAAAAGGATTAGAGGAACAG+AGG - chr4_3:55410094-55410113 Msa0648880:intron 40.0%
CAGAGGAAGATAGATGGAAT+AGG - chr4_3:55410111-55410130 Msa0648880:intron 40.0%
GATGCAGTGAAAAGTGAGAA+AGG - chr4_3:55410208-55410227 Msa0648880:intron 40.0%
GAAAAGTGAGAAAGGACGTT+AGG - chr4_3:55410216-55410235 Msa0648880:intron 40.0%
TCTCTCTTCTCACTACCATA+TGG + chr4_3:55410248-55410267 None:intergenic 40.0%
GTGAGAAGAGGGAAATTGTT+AGG - chr4_3:55410286-55410305 Msa0648880:intron 40.0%
!!! AACTGTTTTGAGGGCACTTT+GGG + chr4_3:55410338-55410357 None:intergenic 40.0%
!!! AAACTGTTTTGAGGGCACTT+TGG + chr4_3:55410339-55410358 None:intergenic 40.0%
TATAGCGGTTAGCGTGTAAT+GGG + chr4_3:55410428-55410447 None:intergenic 40.0%
CAGCAAGAAAACTGTGGTAA+TGG + chr4_3:55410491-55410510 None:intergenic 40.0%
TAGTCAATAGTGCGCTATAG+CGG + chr4_3:55410519-55410538 None:intergenic 40.0%
! CGCACTATTGACTATGAACT+CGG - chr4_3:55410525-55410544 Msa0648880:intron 40.0%
! GCACTATTGACTATGAACTC+GGG - chr4_3:55410526-55410545 Msa0648880:intron 40.0%
CACTCATACACACACATTTG+AGG + chr4_3:55410586-55410605 None:intergenic 40.0%
! GTGTGTATGAGTGCTTGTTT+TGG - chr4_3:55410593-55410612 Msa0648880:intron 40.0%
!!! CTCCCTTTTAAAACTGGTCT+TGG - chr4_3:55410775-55410794 Msa0648880:three_prime_UTR 40.0%
!! TGTAGTGCCATTTCTCTCTT+TGG - chr4_3:55410821-55410840 Msa0648880:three_prime_UTR 40.0%
CAAATTGTGCATGAGAAGTC+TGG - chr4_3:55410942-55410961 Msa0648880:three_prime_UTR 40.0%
ACAATCTGAATTGCCTGTTG+AGG - chr4_3:55411389-55411408 Msa0648880:three_prime_UTR 40.0%
TCATAAACTTCTGCCTCAAC+AGG + chr4_3:55411405-55411424 None:intergenic 40.0%
GGCAGAAGTTTATGAAAGTC+TGG - chr4_3:55411410-55411429 Msa0648880:three_prime_UTR 40.0%
! TTTTTAACAGTTGGCTGCTC+TGG + chr4_3:55411765-55411784 None:intergenic 40.0%
CACCATCAAGAGAACTAAAG+TGG + chr4_3:55411818-55411837 None:intergenic 40.0%
!! TTGATGGTGTTCCACATTCT+AGG - chr4_3:55411829-55411848 Msa0648880:three_prime_UTR 40.0%
GATAGTGAAGTCCTAGAATG+TGG + chr4_3:55411843-55411862 None:intergenic 40.0%
! TCTAGGACTTCACTATCTAG+TGG - chr4_3:55411846-55411865 Msa0648880:three_prime_UTR 40.0%
CTAGGACTTCACTATCTAGT+GGG - chr4_3:55411847-55411866 Msa0648880:three_prime_UTR 40.0%
TCATTCCCGTTAAGGAAAGA+TGG + chr4_3:55411873-55411892 None:intergenic 40.0%
CATAATGTGTATGGAGTCCA+AGG - chr4_3:55411900-55411919 Msa0648880:three_prime_UTR 40.0%
TAAGATGATTCGACCTACCT+TGG + chr4_3:55411965-55411984 None:intergenic 40.0%
CATCTTATGCTTTCTGCTTC+AGG - chr4_3:55411978-55411997 Msa0648880:intron 40.0%
TAACTCTTGAGACTCGAATG+AGG - chr4_3:55412042-55412061 Msa0648880:three_prime_UTR 40.0%
AACTCTTGAGACTCGAATGA+GGG - chr4_3:55412043-55412062 Msa0648880:three_prime_UTR 40.0%
CACCAACTAACTCCTAATGA+CGG - chr4_3:55412068-55412087 Msa0648880:three_prime_UTR 40.0%
!! GTCTAGTGCCATTTGATAGT+AGG - chr4_3:55412093-55412112 Msa0648880:three_prime_UTR 40.0%
TAGTAGGGTTATTCATGAGG+AGG - chr4_3:55412109-55412128 Msa0648880:three_prime_UTR 40.0%
AAGGTTTCAAAGGAAGCGAA+AGG - chr4_3:55412139-55412158 Msa0648880:three_prime_UTR 40.0%
TTTCCCGTACATAAAGAGAG+AGG - chr4_3:55412392-55412411 Msa0648880:intron 40.0%
TGCTCCTCTCTCTTTATGTA+CGG + chr4_3:55412399-55412418 None:intergenic 40.0%
AGAGATTCCTTAGAGAACAG+AGG - chr4_3:55412502-55412521 Msa0648880:intron 40.0%
GATTGAGAAACTGAGACAGA+AGG - chr4_3:55412657-55412676 Msa0648880:intron 40.0%
CCAGACGTTCATCTTCAATA+AGG + chr4_3:55412771-55412790 None:intergenic 40.0%
CCTTATTGAAGATGAACGTC+TGG - chr4_3:55412768-55412787 Msa0648880:intron 40.0%
GGAATTAGCTGCATCAAAGA+AGG - chr4_3:55412798-55412817 Msa0648880:intron 40.0%
GAAGGGGTTATCTTCAATAC+TGG - chr4_3:55412816-55412835 Msa0648880:intron 40.0%
AAATGAGAGAGACATCTGTG+TGG - chr4_3:55413026-55413045 Msa0648880:intron 40.0%
AATGAGAGAGACATCTGTGT+GGG - chr4_3:55413027-55413046 Msa0648880:intron 40.0%
TATCAGTTAAGTGGCCCATT+AGG - chr4_3:55413474-55413493 Msa0648880:intron 40.0%
TAAATAACAAGAGGCCCAGT+AGG - chr4_3:55413499-55413518 Msa0648880:intron 40.0%
CAACACAACTCATTCCTACT+GGG + chr4_3:55413516-55413535 None:intergenic 40.0%
! CATCTTGTTTGTGCTGTGTT+CGG - chr4_3:55413635-55413654 Msa0648880:intron 40.0%
! CATCTTGTTTGTGCTGTGTT+CGG - chr4_3:55413635-55413654 Msa0648880:intron 40.0%
GGTCTTAAATATAGCAACGG+AGG + chr4_3:55413868-55413887 None:intergenic 40.0%
GGAAAGAGAATGCACATGAT+TGG + chr4_3:55413942-55413961 None:intergenic 40.0%
CTTCTGCCCCTTAGATTAAA+TGG - chr4_3:55414156-55414175 Msa0648880:intron 40.0%
!!! AATTGGTTTTTCAGATGGGC+AGG - chr4_3:55414315-55414334 Msa0648880:intron 40.0%
TTAACTGTACAGACTTGGGT+GGG + chr4_3:55414348-55414367 None:intergenic 40.0%
TTTAACTGTACAGACTTGGG+TGG + chr4_3:55414349-55414368 None:intergenic 40.0%
TGACCAAGGTTGAATCGAAA+AGG + chr4_3:55414377-55414396 None:intergenic 40.0%
TCAGATTCTGACGAGAATGT+TGG - chr4_3:55414394-55414413 Msa0648880:intron 40.0%
ATATAACCTTGTGGCCTTTC+AGG + chr4_3:55414509-55414528 None:intergenic 40.0%
GTGCATTATCTTGTGCCAAA+TGG - chr4_3:55414612-55414631 Msa0648880:CDS 40.0%
GTATTCTGTAACCTCTTACC+GGG - chr4_3:55414745-55414764 Msa0648880:intron 40.0%
!! TTATTTTATGGCCCGGTAAG+AGG + chr4_3:55414759-55414778 None:intergenic 40.0%
TGGAATATGGCCATTTACGT+TGG - chr4_3:55415002-55415021 Msa0648880:intron 40.0%
!! TCTTTAAGGTCCCTATCTGT+TGG - chr4_3:55415090-55415109 Msa0648880:intron 40.0%
GGTGGAATTTCCAACAGATA+GGG + chr4_3:55415103-55415122 None:intergenic 40.0%
AGGTGGAATTTCCAACAGAT+AGG + chr4_3:55415104-55415123 None:intergenic 40.0%
TGGAAATTCCACCTTCATTG+CGG - chr4_3:55415110-55415129 Msa0648880:intron 40.0%
TCCAACACCTTCAATGTGTT+GGG - chr4_3:55415183-55415202 Msa0648880:intron 40.0%
TTCAATGTGTTGGGTGTGAA+GGG - chr4_3:55415192-55415211 Msa0648880:intron 40.0%
GTCCACATTGCCTAGATATA+TGG - chr4_3:55415224-55415243 Msa0648880:intron 40.0%
!!! GAAAACGGCTTTTAAGGTGA+GGG + chr4_3:55415279-55415298 None:intergenic 40.0%
! CCTTACGAAAACGGCTTTTA+AGG + chr4_3:55415285-55415304 None:intergenic 40.0%
!! CCTTAAAAGCCGTTTTCGTA+AGG - chr4_3:55415282-55415301 Msa0648880:intron 40.0%
! CGTTTTCGTAAGGTTGAGTT+AGG - chr4_3:55415292-55415311 Msa0648880:intron 40.0%
ACAGGCCAAGGAATAGTTTA+AGG + chr4_3:55415364-55415383 None:intergenic 40.0%
TGAATATTGAGCCCTCAGTT+TGG + chr4_3:55415393-55415412 None:intergenic 40.0%
GCAACATGTAATGCTTGTCA+AGG + chr4_3:55415485-55415504 None:intergenic 40.0%
TGGATCTCAGAAGAGCAATA+TGG + chr4_3:55415579-55415598 None:intergenic 40.0%
TTAGCTCCTAATCCAGTAGT+GGG + chr4_3:55415634-55415653 None:intergenic 40.0%
! CAGAGTTCGTAACACTGTTT+TGG + chr4_3:55415657-55415676 None:intergenic 40.0%
CAAAACAGTGTTACGAACTC+TGG - chr4_3:55415655-55415674 Msa0648880:intron 40.0%
TATACTGTCAGGCGTATGTA+TGG - chr4_3:55415785-55415804 Msa0648880:intron 40.0%
ATACTGTCAGGCGTATGTAT+GGG - chr4_3:55415786-55415805 Msa0648880:intron 40.0%
AAAATCTCCGGCCATGTTAA+TGG + chr4_3:55415847-55415866 None:intergenic 40.0%
GCAAATTGTCGCAAAATCTC+CGG + chr4_3:55415859-55415878 None:intergenic 40.0%
TTTGCATTGTCAGCTGGATT+TGG - chr4_3:55415874-55415893 Msa0648880:intron 40.0%
TTGCATTGTCAGCTGGATTT+GGG - chr4_3:55415875-55415894 Msa0648880:intron 40.0%
GAAATCACCTCATTGTTGCT+AGG + chr4_3:55415937-55415956 None:intergenic 40.0%
GTCCCTGACATCATACTTAT+TGG - chr4_3:55416266-55416285 Msa0648880:CDS 40.0%
GCACCAATAAGTATGATGTC+AGG + chr4_3:55416272-55416291 None:intergenic 40.0%
AAATGGCACATCTACATCGA+CGG + chr4_3:55416421-55416440 None:intergenic 40.0%
GAAAGGGATGTTGAACGAAA+TGG - chr4_3:55416556-55416575 Msa0648880:CDS 40.0%
AAGGGATGTTGAACGAAATG+GGG - chr4_3:55416558-55416577 Msa0648880:CDS 40.0%
CAATTTCCCTGATTGTGAGA+GGG + chr4_3:55416604-55416623 None:intergenic 40.0%
ACAATTTCCCTGATTGTGAG+AGG + chr4_3:55416605-55416624 None:intergenic 40.0%
TTCCAAGTGCAGGTTAATGA+TGG - chr4_3:55416769-55416788 Msa0648880:CDS 40.0%
TACCATCATTAACCTGCACT+TGG + chr4_3:55416774-55416793 None:intergenic 40.0%
AGGGCTTATCTAATCCAAGA+AGG - chr4_3:55416860-55416879 Msa0648880:CDS 40.0%
GGAAATTGCAGACAAGATTC+AGG - chr4_3:55416969-55416988 Msa0648880:CDS 40.0%
CCGAGACAATGAATAAGACA+AGG + chr4_3:55417009-55417028 None:intergenic 40.0%
TACAACAAGCAAATCACCAG+AGG - chr4_3:55417093-55417112 Msa0648880:five_prime_UTR 40.0%
CTATAGCTTCTGCTTTGTCT+AGG - chr4_3:55417119-55417138 Msa0648880:five_prime_UTR 40.0%
GGTCGTACACAATATGTTGA+AGG + chr4_3:55417172-55417191 None:intergenic 40.0%
!!! AAGCAATTTTTTCAGCTGCC+AGG - chr4_3:55417221-55417240 Msa0648880:five_prime_UTR 40.0%
!!! AGCAATTTTTTCAGCTGCCA+GGG - chr4_3:55417222-55417241 Msa0648880:five_prime_UTR 40.0%
GAATATCCTGATTCTTTCCC+TGG + chr4_3:55417242-55417261 None:intergenic 40.0%
!! AAGTAGCTGATGATGGTGAA+AGG - chr4_3:55417284-55417303 Msa0648880:intron 40.0%
!! AGTAGCTGATGATGGTGAAA+GGG - chr4_3:55417285-55417304 Msa0648880:intron 40.0%
GCAAACACTGTCATGAGAAA+TGG - chr4_3:55417409-55417428 Msa0648880:intron 40.0%
ATGAGAAATGGGAAGGACAA+TGG - chr4_3:55417421-55417440 Msa0648880:intron 40.0%
TGATAGTTGCCATGAGAAAG+TGG - chr4_3:55417462-55417481 Msa0648880:five_prime_UTR 40.0%
! ACTGTTGATGAAGGCTTTGA+CGG - chr4_3:55417502-55417521 Msa0648880:five_prime_UTR 40.0%
CAGCAATTTCACTAGACGTA+CGG + chr4_3:55417540-55417559 None:intergenic 40.0%
GATGTTGACGAAAACACTCT+TGG - chr4_3:55417601-55417620 Msa0648880:five_prime_UTR 40.0%
AAAACACTCTTGGTGAACCA+TGG - chr4_3:55417611-55417630 Msa0648880:five_prime_UTR 40.0%
AAACACTCTTGGTGAACCAT+GGG - chr4_3:55417612-55417631 Msa0648880:five_prime_UTR 40.0%
CTTTCAGGAACGTTTAGAAG+CGG - chr4_3:55417855-55417874 Msa0648880:intron 40.0%
! AAAGAAACAGATGTTGGCTG+AGG - chr4_3:55417888-55417907 Msa0648880:intron 40.0%
AATGCAGTCTTCCTCATGTT+TGG - chr4_3:55417954-55417973 Msa0648880:intron 40.0%
ATGCAGTCTTCCTCATGTTT+GGG - chr4_3:55417955-55417974 Msa0648880:intron 40.0%
GTTACATTTCCATCATTGGG+GGG - chr4_3:55417997-55418016 Msa0648880:intron 40.0%
TAGATCATTGCCTCTTGGTT+TGG - chr4_3:55418281-55418300 Msa0648880:intron 40.0%
TCTGCTTCTCAAAATGATCC+AGG - chr4_3:55418339-55418358 Msa0648880:intron 40.0%
TGGAATTACATGACAGCTGT+TGG - chr4_3:55418379-55418398 Msa0648880:intron 40.0%
! GAAGCTGATTGATTCTGTAG+AGG - chr4_3:55418401-55418420 Msa0648880:intron 40.0%
GTATGCTTACCCAATCATCA+TGG - chr4_3:55418529-55418548 Msa0648880:intron 40.0%
GACCCATTACCAATCTATTG+TGG - chr4_3:55418656-55418675 Msa0648880:intron 40.0%
TACCAATCTATTGTGGTCAC+TGG - chr4_3:55418663-55418682 Msa0648880:intron 40.0%
AGCATTCATGAGAATGAAGG+GGG + chr4_3:55418757-55418776 None:intergenic 40.0%
!! TCAGGGTTTTGATGCTCTTT+CGG - chr4_3:55419120-55419139 Msa0648880:intron 40.0%
TGATGCTCTTTCGGTATCAT+TGG - chr4_3:55419129-55419148 Msa0648880:intron 40.0%
TCATATGCAAGTGAGACTCT+CGG + chr4_3:55419168-55419187 None:intergenic 40.0%
TGTCAAGAATCTCAACACAG+AGG - chr4_3:55419273-55419292 Msa0648880:intron 40.0%
CAACACAGAGGCAGTTAAAA+TGG - chr4_3:55419285-55419304 Msa0648880:intron 40.0%
! TGATGATTTGGACACATCAG+TGG - chr4_3:55419360-55419379 Msa0648880:intron 40.0%
! CTTTGAGAAATGGATGCGAA+AGG - chr4_3:55419456-55419475 Msa0648880:intron 40.0%
CAATGAAGTTTGGGAAGAAG+AGG - chr4_3:55419506-55419525 Msa0648880:intron 40.0%
GAACGTATTGCTCAATCTGA+AGG - chr4_3:55419646-55419665 Msa0648880:intron 40.0%
TCTCATCCTTGTTGAAGAAG+AGG + chr4_3:55419710-55419729 None:intergenic 40.0%
AAATAGCTGTTATTAGGGGC+AGG - chr4_3:55419823-55419842 Msa0648880:intron 40.0%
AAACCAGGTATAGAGGAAGT+GGG + chr4_3:55419974-55419993 None:intergenic 40.0%
! TTGGTGGCTATTACAAGTAG+GGG - chr4_3:55420089-55420108 Msa0648880:intron 40.0%
TGACTATTGCAGGAACATCA+TGG - chr4_3:55420162-55420181 Msa0648880:intron 40.0%
TTCTTAGTCTCCAATGCTCA+GGG + chr4_3:55420218-55420237 None:intergenic 40.0%
TTTCTTAGTCTCCAATGCTC+AGG + chr4_3:55420219-55420238 None:intergenic 40.0%
AAAAGGTTGCAGAGCTTCTT+GGG + chr4_3:55420513-55420532 None:intergenic 40.0%
AAAAAGGTTGCAGAGCTTCT+TGG + chr4_3:55420514-55420533 None:intergenic 40.0%
! AAGAAGCTCTGCAACCTTTT+TGG - chr4_3:55420513-55420532 Msa0648880:intron 40.0%
AAAGTCTTGGAGTTCAAAGC+TGG - chr4_3:55420550-55420569 Msa0648880:intron 40.0%
TGGCATATCTTGATAGAGCA+TGG - chr4_3:55420614-55420633 Msa0648880:intron 40.0%
GATAGAGCATGGTCATACTT+TGG - chr4_3:55420625-55420644 Msa0648880:intron 40.0%
! TAGATGTTGACTGCATTGGA+AGG - chr4_3:55420754-55420773 Msa0648880:intron 40.0%
GAAACTACGAATGAGCTGTT+AGG - chr4_3:55420811-55420830 Msa0648880:intron 40.0%
TTAGGTTCTGTTTGCTCTTC+TGG - chr4_3:55420829-55420848 Msa0648880:intron 40.0%
CTCCCTAATGATATCATAGG+TGG - chr4_3:55420856-55420875 Msa0648880:intron 40.0%
TGTAAAAGATGCATGCATCG+AGG + chr4_3:55420948-55420967 None:intergenic 40.0%
GTAATGTAAAGCTCTCACTG+TGG - chr4_3:55421081-55421100 Msa0648880:intron 40.0%
TAAAACTTAAGGTGCGTCCT+AGG - chr4_3:55421153-55421172 Msa0648880:intron 40.0%
GCGTCCTAGGATATTAGAAT+TGG - chr4_3:55421166-55421185 Msa0648880:intron 40.0%
CTAAGCATACCGTAAAGAAC+TGG - chr4_3:55421386-55421405 Msa0648880:intron 40.0%
AAGCATACCGTAAAGAACTG+GGG - chr4_3:55421388-55421407 Msa0648880:intron 40.0%
GTGATCTTTGACCAAGAGAA+TGG + chr4_3:55421474-55421493 None:intergenic 40.0%
TCTCTTGGTCAAAGATCACA+AGG - chr4_3:55421475-55421494 Msa0648880:five_prime_UTR 40.0%
GGAAGATTACTTGGATGGAA+AGG - chr4_3:55421562-55421581 Msa0648880:five_prime_UTR 40.0%
GATGTGATCACTAGTGAAAG+GGG - chr4_3:55421658-55421677 Msa0648880:five_prime_UTR 40.0%
! CAACTCCGTGATATCTTTTG+GGG + chr4_3:55421686-55421705 None:intergenic 40.0%
! GTCAACTCCGTGATATCTTT+TGG + chr4_3:55421688-55421707 None:intergenic 40.0%
TCTGTGAGAGAAGAGATTGA+CGG - chr4_3:55421715-55421734 Msa0648880:five_prime_UTR 40.0%
AGATAAGTGTGATTTCGTGG+TGG - chr4_3:55421807-55421826 Msa0648880:five_prime_UTR 40.0%
AGAACAGGACCACTATAATG+AGG - chr4_3:55421888-55421907 Msa0648880:intron 40.0%
CCTCATCATCCTCATTATAG+TGG + chr4_3:55421900-55421919 None:intergenic 40.0%
CCACTATAATGAGGATGATG+AGG - chr4_3:55421897-55421916 Msa0648880:intron 40.0%
GATGACAATGTCAATGACGA+CGG - chr4_3:55421934-55421953 Msa0648880:intron 40.0%
GTCAATGACGACGGAAAATA+TGG - chr4_3:55421943-55421962 Msa0648880:intron 40.0%
TGGGCAAGTCAAACTTAATG+TGG - chr4_3:55421963-55421982 Msa0648880:intron 40.0%
AATGAGGATCCAGATAGAGT+TGG - chr4_3:55422036-55422055 Msa0648880:five_prime_UTR 40.0%
ATAGGCCAATATCAAGTGCT+TGG - chr4_3:55422162-55422181 Msa0648880:five_prime_UTR 40.0%
TAGGCCAATATCAAGTGCTT+GGG - chr4_3:55422163-55422182 Msa0648880:five_prime_UTR 40.0%
CTATCCCAAGCACTTGATAT+TGG + chr4_3:55422170-55422189 None:intergenic 40.0%
AACATAATGACTCTGCTGCA+TGG + chr4_3:55422332-55422351 None:intergenic 40.0%
CATGAAGCAGCATAAGAAGA+GGG + chr4_3:55422365-55422384 None:intergenic 40.0%
TCATGAAGCAGCATAAGAAG+AGG + chr4_3:55422366-55422385 None:intergenic 40.0%
! GCTATGGAAGCTTGTTCAGA+AGG - chr4_3:55406917-55406936 Msa0648880:three_prime_UTR 45.0%
GAACAAGAACAAGCCATTGG+AGG - chr4_3:55406946-55406965 Msa0648880:three_prime_UTR 45.0%
GGTGAGCTATCTGTGAAGTT+GGG - chr4_3:55407164-55407183 Msa0648880:three_prime_UTR 45.0%
CTGATCGTCAATTGCAGATG+TGG - chr4_3:55407192-55407211 Msa0648880:three_prime_UTR 45.0%
TCCCTCATTGGAACCAAACT+CGG + chr4_3:55407266-55407285 None:intergenic 45.0%
! AGTTTGGTTCCAATGAGGGA+CGG - chr4_3:55407266-55407285 Msa0648880:three_prime_UTR 45.0%
ATTGAGGCCAATTGGTCGTA+TGG - chr4_3:55407343-55407362 Msa0648880:three_prime_UTR 45.0%
AGCAAGTCCATACGACCAAT+TGG + chr4_3:55407353-55407372 None:intergenic 45.0%
AATTGGTCGTATGGACTTGC+TGG - chr4_3:55407352-55407371 Msa0648880:three_prime_UTR 45.0%
! ATTGGTCGTATGGACTTGCT+GGG - chr4_3:55407353-55407372 Msa0648880:three_prime_UTR 45.0%
GCTGCAAGCTATTGCATTTG+TGG - chr4_3:55407478-55407497 Msa0648880:three_prime_UTR 45.0%
! TGATGGACCTATTCTTGGGA+TGG - chr4_3:55407529-55407548 Msa0648880:three_prime_UTR 45.0%
GGAATTTGATTCTTTGCCGC+TGG - chr4_3:55407550-55407569 Msa0648880:three_prime_UTR 45.0%
GGTGCACCATTAGGTAATCT+TGG - chr4_3:55407581-55407600 Msa0648880:three_prime_UTR 45.0%
TTGTACATCAAGGGTGGGAA+GGG + chr4_3:55407643-55407662 None:intergenic 45.0%
TTTGTACATCAAGGGTGGGA+AGG + chr4_3:55407644-55407663 None:intergenic 45.0%
CCCACCCTTGATGTACAAAA+AGG - chr4_3:55407645-55407664 Msa0648880:three_prime_UTR 45.0%
! CCCTTTTTGTACATCAAGGG+TGG + chr4_3:55407649-55407668 None:intergenic 45.0%
AAAGAGAAAGAGGCTCTGCT+AGG - chr4_3:55408265-55408284 Msa0648880:intron 45.0%
AAGAGAAAGAGGCTCTGCTA+GGG - chr4_3:55408266-55408285 Msa0648880:intron 45.0%
ACCCAAAAATTCCGCTATCG+CGG - chr4_3:55408509-55408528 Msa0648880:intron 45.0%
AATCGCAGTCGCAGAGAATT+TGG - chr4_3:55408754-55408773 Msa0648880:intron 45.0%
ATCGCAGTCGCAGAGAATTT+GGG - chr4_3:55408755-55408774 Msa0648880:intron 45.0%
CTCGTTTGATTCTTCGCAAC+TGG + chr4_3:55408821-55408840 None:intergenic 45.0%
CAGTTGCGAAGAATCAAACG+AGG - chr4_3:55408819-55408838 Msa0648880:intron 45.0%
! GAATCAAACGAGGGTGCATT+TGG - chr4_3:55408829-55408848 Msa0648880:intron 45.0%
ACAACTGCAAGTAGGTAGGT+CGG + chr4_3:55408978-55408997 None:intergenic 45.0%
GAACAAGGCTGCACCATTAT+TGG - chr4_3:55409050-55409069 Msa0648880:intron 45.0%
AAGGCTGCACCATTATTGGA+GGG - chr4_3:55409054-55409073 Msa0648880:intron 45.0%
TTAATGGCCACGGCTCTTAA+TGG + chr4_3:55409234-55409253 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr4_3:55409322-55409341 Msa0648880:three_prime_UTR 45.0%
AAGTAGTCAATCCCGGATAG+TGG - chr4_3:55409487-55409506 Msa0648880:three_prime_UTR 45.0%
! CGCTCATGCTATCCAACTTT+TGG + chr4_3:55409529-55409548 None:intergenic 45.0%
!!! ATGCCAAGAGGTTTTGGACA+CGG + chr4_3:55409711-55409730 None:intergenic 45.0%
TGGGAAAAGCAAATGCCAAG+AGG + chr4_3:55409723-55409742 None:intergenic 45.0%
ACAACTTTACCGTTGTGCCA+AGG + chr4_3:55409813-55409832 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr4_3:55409828-55409847 Msa0648880:three_prime_UTR 45.0%
! CTACACAAGAGGTTGTTTCC+AGG + chr4_3:55409868-55409887 None:intergenic 45.0%
! AAGAGCGTAAAACAGAGCAG+TGG - chr4_3:55410060-55410079 Msa0648880:intron 45.0%
GAGGAACAGAGGAAGATAGA+TGG - chr4_3:55410105-55410124 Msa0648880:intron 45.0%
ACCTGAACAGAAGAAGACGA+TGG - chr4_3:55410140-55410159 Msa0648880:intron 45.0%
TGAACAGAAGAAGACGATGG+CGG - chr4_3:55410143-55410162 Msa0648880:intron 45.0%
TGAGAAAGGACGTTAGGGTT+TGG - chr4_3:55410222-55410241 Msa0648880:intron 45.0%
!!! ACTGTTTTGAGGGCACTTTG+GGG + chr4_3:55410337-55410356 None:intergenic 45.0%
ATAGCGGTTAGCGTGTAATG+GGG + chr4_3:55410427-55410446 None:intergenic 45.0%
CTATAGCGGTTAGCGTGTAA+TGG + chr4_3:55410429-55410448 None:intergenic 45.0%
GTGTAGCAGCAAGAAAACTG+TGG + chr4_3:55410497-55410516 None:intergenic 45.0%
ATATTCGCTTAGGGTACGAG+TGG + chr4_3:55410553-55410572 None:intergenic 45.0%
AGTGGGCCATCTTTCCTTAA+CGG - chr4_3:55411864-55411883 Msa0648880:three_prime_UTR 45.0%
GTGCAGATTCATTCCCGTTA+AGG + chr4_3:55411881-55411900 None:intergenic 45.0%
GATCAGGTATCTTCTGACCT+TGG + chr4_3:55411920-55411939 None:intergenic 45.0%
! CTTTTGTCTCAGTCTCACCA+AGG - chr4_3:55411945-55411964 Msa0648880:intron 45.0%
CTTATGCTTTCTGCTTCAGG+AGG - chr4_3:55411981-55412000 Msa0648880:intron 45.0%
CTAGAGTGGTTGTTCATGCT+TGG - chr4_3:55412196-55412215 Msa0648880:three_prime_UTR 45.0%
GCTCCTCTCTCTTTATGTAC+GGG + chr4_3:55412398-55412417 None:intergenic 45.0%
AAAGGCAGAAGGAAGAGGAA+AGG - chr4_3:55412451-55412470 Msa0648880:intron 45.0%
ACACGACAGATCAGAGTGAT+TGG + chr4_3:55412602-55412621 None:intergenic 45.0%
TGAGAAACTGAGACAGAAGG+AGG - chr4_3:55412660-55412679 Msa0648880:intron 45.0%
ACAGAAGGAGGAACTACAGA+GGG - chr4_3:55412672-55412691 Msa0648880:intron 45.0%
CAGAATGGTCAAAGACGCAA+TGG - chr4_3:55412744-55412763 Msa0648880:intron 45.0%
! AGATGAACGTCTGGAACTCA+TGG - chr4_3:55412777-55412796 Msa0648880:intron 45.0%
TGCCGAACTGTACAACCTTT+AGG + chr4_3:55412960-55412979 None:intergenic 45.0%
GAGACATCTGTGTGGGAAAT+AGG - chr4_3:55413034-55413053 Msa0648880:intron 45.0%
CCAACACAACTCATTCCTAC+TGG + chr4_3:55413517-55413536 None:intergenic 45.0%
CCAGTAGGAATGAGTTGTGT+TGG - chr4_3:55413514-55413533 Msa0648880:intron 45.0%
TTGTGTTGGAGCTTTGCTCT+GGG - chr4_3:55413528-55413547 Msa0648880:intron 45.0%
! GAGCCTTTTCGATTCAACCT+TGG - chr4_3:55414371-55414390 Msa0648880:intron 45.0%
TTCTCGTCAGAATCTGACCA+AGG + chr4_3:55414391-55414410 None:intergenic 45.0%
! TACTGGCTGGTTAATGGGAT+TGG - chr4_3:55414460-55414479 Msa0648880:intron 45.0%
!! AATGGGATTGGCTTGGACAT+TGG - chr4_3:55414472-55414491 Msa0648880:intron 45.0%
!!! GGCTGACTTTATTTTCTGCC+TGG - chr4_3:55414633-55414652 Msa0648880:CDS 45.0%
AAGTGGTGAAGCAGGTTACA+TGG + chr4_3:55414692-55414711 None:intergenic 45.0%
ATGTAACCTGCTTCACCACT+TGG - chr4_3:55414691-55414710 Msa0648880:intron 45.0%
TGATTTCCAAGTGGTGAAGC+AGG + chr4_3:55414700-55414719 None:intergenic 45.0%
!! CAACACATTGAAGGTGTTGG+AGG + chr4_3:55415184-55415203 None:intergenic 45.0%
CTCCAACACCTTCAATGTGT+TGG - chr4_3:55415182-55415201 Msa0648880:intron 45.0%
! ACCCAACACATTGAAGGTGT+TGG + chr4_3:55415187-55415206 None:intergenic 45.0%
CTTCACACCCAACACATTGA+AGG + chr4_3:55415193-55415212 None:intergenic 45.0%
CTTCAATGTGTTGGGTGTGA+AGG - chr4_3:55415191-55415210 Msa0648880:intron 45.0%
TCAATGTGTTGGGTGTGAAG+GGG - chr4_3:55415193-55415212 Msa0648880:intron 45.0%
GGCCATATATCTAGGCAATG+TGG + chr4_3:55415229-55415248 None:intergenic 45.0%
ACCACACAGGCCATATATCT+AGG + chr4_3:55415237-55415256 None:intergenic 45.0%
!!! CGAAAACGGCTTTTAAGGTG+AGG + chr4_3:55415280-55415299 None:intergenic 45.0%
AGAACACCCACTACTGGATT+AGG - chr4_3:55415625-55415644 Msa0648880:intron 45.0%
GTTAGCTCCTAATCCAGTAG+TGG + chr4_3:55415635-55415654 None:intergenic 45.0%
AACAGTGTTACGAACTCTGG+TGG - chr4_3:55415658-55415677 Msa0648880:intron 45.0%
ACAGTGTTACGAACTCTGGT+GGG - chr4_3:55415659-55415678 Msa0648880:intron 45.0%
GGCATCCTCAAGTAGTTGAA+GGG - chr4_3:55415683-55415702 Msa0648880:intron 45.0%
GCATCCTCAAGTAGTTGAAG+GGG - chr4_3:55415684-55415703 Msa0648880:intron 45.0%
CATACCCCTTCAACTACTTG+AGG + chr4_3:55415691-55415710 None:intergenic 45.0%
TACTGTCAGGCGTATGTATG+GGG - chr4_3:55415787-55415806 Msa0648880:intron 45.0%
CGACAATTTGCATTGTCAGC+TGG - chr4_3:55415868-55415887 Msa0648880:intron 45.0%
!! TTAGTCAAGGCATTGGTTGG+TGG + chr4_3:55416111-55416130 None:intergenic 45.0%
GTAGGCTGCACCAATACAAA+TGG + chr4_3:55416438-55416457 None:intergenic 45.0%
! TGTATTGGTGCAGCCTACTT+AGG - chr4_3:55416440-55416459 Msa0648880:intron 45.0%
! AATGATGGTGCGACCTAAGT+AGG + chr4_3:55416456-55416475 None:intergenic 45.0%
CATAAACATCGTTTGACGCC+TGG - chr4_3:55416883-55416902 Msa0648880:CDS 45.0%
GCAGCATATTTCACAGTTCC+AGG + chr4_3:55416904-55416923 None:intergenic 45.0%
! TGCATTTTATGCCCTAGCTC+TGG - chr4_3:55416921-55416940 Msa0648880:CDS 45.0%
!!! TTTTATGCCCTAGCTCTGGA+AGG - chr4_3:55416925-55416944 Msa0648880:CDS 45.0%
AAGCCGAGGCCTCAATATAT+TGG - chr4_3:55416948-55416967 Msa0648880:CDS 45.0%
GCTGGGTCCTTTCTATATAC+AGG + chr4_3:55417193-55417212 None:intergenic 45.0%
CACTGTCATGAGAAATGGGA+AGG - chr4_3:55417414-55417433 Msa0648880:intron 45.0%
TTGCCATGAGAAAGTGGATG+AGG - chr4_3:55417468-55417487 Msa0648880:five_prime_UTR 45.0%
TGCCATGAGAAAGTGGATGA+GGG - chr4_3:55417469-55417488 Msa0648880:five_prime_UTR 45.0%
AACCCTCATCCACTTTCTCA+TGG + chr4_3:55417474-55417493 None:intergenic 45.0%
GAGAAAGTGGATGAGGGTTT+AGG - chr4_3:55417475-55417494 Msa0648880:five_prime_UTR 45.0%
! AGAGTACTCGGATCTTAGTG+TGG - chr4_3:55417654-55417673 Msa0648880:intron 45.0%
TTCTATTCGTGTTGCGCTTG+AGG - chr4_3:55417729-55417748 Msa0648880:intron 45.0%
GTGCATTTATCTGTTCACGC+TGG + chr4_3:55418086-55418105 None:intergenic 45.0%
ATCGAAGACGAAACCGATAC+TGG - chr4_3:55418304-55418323 Msa0648880:intron 45.0%
TCTCAAAATGATCCAGGTGC+TGG - chr4_3:55418345-55418364 Msa0648880:intron 45.0%
!! AAAATGATCCAGGTGCTGGT+AGG - chr4_3:55418349-55418368 Msa0648880:intron 45.0%
ACAAAAATCCTACCAGCACC+TGG + chr4_3:55418360-55418379 None:intergenic 45.0%
!!! AGGTGCTGGTAGGATTTTTG+TGG - chr4_3:55418359-55418378 Msa0648880:intron 45.0%
! TTATTGTCGTGAGTGCTGCT+TGG - chr4_3:55418592-55418611 Msa0648880:intron 45.0%
!! TATTGTCGTGAGTGCTGCTT+GGG - chr4_3:55418593-55418612 Msa0648880:intron 45.0%
TCCTTGAACCCTATCATGGT+GGG + chr4_3:55418629-55418648 None:intergenic 45.0%
TTCCTTGAACCCTATCATGG+TGG + chr4_3:55418630-55418649 None:intergenic 45.0%
ACCATGATAGGGTTCAAGGA+AGG - chr4_3:55418629-55418648 Msa0648880:intron 45.0%
ACCTTCCTTGAACCCTATCA+TGG + chr4_3:55418633-55418652 None:intergenic 45.0%
GATAGGGTTCAAGGAAGGTT+TGG - chr4_3:55418634-55418653 Msa0648880:intron 45.0%
GACCAGTGACCACAATAGAT+TGG + chr4_3:55418668-55418687 None:intergenic 45.0%
TGTCTTGCAAATGCAAGGTC+AGG + chr4_3:55418693-55418712 None:intergenic 45.0%
GCATTCATGAGAATGAAGGG+GGG + chr4_3:55418756-55418775 None:intergenic 45.0%
TCGGTATCATTGGACTTACG+TGG - chr4_3:55419139-55419158 Msa0648880:intron 45.0%
CGGTATCATTGGACTTACGT+GGG - chr4_3:55419140-55419159 Msa0648880:intron 45.0%
CTGAAAGTTCTATGGCACGA+AGG + chr4_3:55419598-55419617 None:intergenic 45.0%
GAAACCAGGTATAGAGGAAG+TGG + chr4_3:55419975-55419994 None:intergenic 45.0%
ACAAAGACATCAGAGGGAGA+GGG + chr4_3:55419997-55420016 None:intergenic 45.0%
AACAAAGACATCAGAGGGAG+AGG + chr4_3:55419998-55420017 None:intergenic 45.0%
GCTCGAACAAAGACATCAGA+GGG + chr4_3:55420003-55420022 None:intergenic 45.0%
AGCTCGAACAAAGACATCAG+AGG + chr4_3:55420004-55420023 None:intergenic 45.0%
TGGTGGCTATTACAAGTAGG+GGG - chr4_3:55420090-55420109 Msa0648880:intron 45.0%
AAAGGTTGCAGAGCTTCTTG+GGG + chr4_3:55420512-55420531 None:intergenic 45.0%
! TGCAACCTTTTTGGACAGAG+AGG - chr4_3:55420522-55420541 Msa0648880:intron 45.0%
CTGTACCTCTCTGTCCAAAA+AGG + chr4_3:55420530-55420549 None:intergenic 45.0%
! CAGAGAGGTACAGAAAGTCT+TGG - chr4_3:55420537-55420556 Msa0648880:intron 45.0%
CAGAATGTCTTCCGTTGATG+AGG + chr4_3:55420582-55420601 None:intergenic 45.0%
ATCAACGGAAGACATTCTGC+AGG - chr4_3:55420583-55420602 Msa0648880:intron 45.0%
ATGTAAAGCTCTCACTGTGG+CGG - chr4_3:55421084-55421103 Msa0648880:intron 45.0%
AAATAGAATCAGCCACTCCC+TGG + chr4_3:55421112-55421131 None:intergenic 45.0%
!! AGCATCGCAGGAATTTTTGG+CGG + chr4_3:55421341-55421360 None:intergenic 45.0%
! ACCAGCATCGCAGGAATTTT+TGG + chr4_3:55421344-55421363 None:intergenic 45.0%
!! AAGAGCACCCCAGTTCTTTA+CGG + chr4_3:55421398-55421417 None:intergenic 45.0%
AGAGCTTCAACAGAGGACAA+AGG - chr4_3:55421431-55421450 Msa0648880:five_prime_UTR 45.0%
TTTGACCAAGAGAATGGCTG+CGG + chr4_3:55421468-55421487 None:intergenic 45.0%
GCATCTAACAGCAGGAAAGA+AGG - chr4_3:55421541-55421560 Msa0648880:five_prime_UTR 45.0%
ATCACATCTATCTTGGCTGC+TGG + chr4_3:55421646-55421665 None:intergenic 45.0%
GGGTACCCCAAAAGATATCA+CGG - chr4_3:55421678-55421697 Msa0648880:five_prime_UTR 45.0%
TGAGGATGATGAGGAAGACA+TGG - chr4_3:55421906-55421925 Msa0648880:intron 45.0%
TGATGAGGAAGACATGGATG+TGG - chr4_3:55421912-55421931 Msa0648880:intron 45.0%
GAGGTTGAACCAACTCTATC+TGG + chr4_3:55422048-55422067 None:intergenic 45.0%
! AGAGTTGGTTCAACCTCATC+TGG - chr4_3:55422051-55422070 Msa0648880:five_prime_UTR 45.0%
!!! ATTTTTAGTATAAAATATAT+AGG + chr4_3:55408071-55408090 None:intergenic 5.0%
!! ACAAAAAAAAAAAAATTAAT+TGG + chr4_3:55410968-55410987 None:intergenic 5.0%
!!! TAAATTTTTTTGTTTTTATT+TGG - chr4_3:55416746-55416765 Msa0648880:CDS 5.0%
!! AATATAAAAAAATAACTTAT+GGG + chr4_3:55422124-55422143 None:intergenic 5.0%
!! AAATATAAAAAAATAACTTA+TGG + chr4_3:55422125-55422144 None:intergenic 5.0%
!!! TAATATATATTCTTTTTTTT+TGG + chr4_3:55422208-55422227 None:intergenic 5.0%
AGTGGAGACTTACCCTTCTG+AGG - chr4_3:55407133-55407152 Msa0648880:three_prime_UTR 50.0%
!! TTACCCTTCTGAGGCAACGA+GGG - chr4_3:55407142-55407161 Msa0648880:three_prime_UTR 50.0%
GGGTGAGCTATCTGTGAAGT+TGG - chr4_3:55407163-55407182 Msa0648880:three_prime_UTR 50.0%
! TGCAGATGTGGTTCTGTCAC+CGG - chr4_3:55407204-55407223 Msa0648880:three_prime_UTR 50.0%
CCTTTCGATCCTTCTGTCTC+CGG + chr4_3:55407226-55407245 None:intergenic 50.0%
ACAGAAGGATCGAAAGGCTG+TGG - chr4_3:55407229-55407248 Msa0648880:three_prime_UTR 50.0%
! GCCGAGTTTGGTTCCAATGA+GGG - chr4_3:55407262-55407281 Msa0648880:three_prime_UTR 50.0%
TTCACAACACCGTCCCTCAT+TGG + chr4_3:55407278-55407297 None:intergenic 50.0%
!! GTGATGGGCTTTCGTAGGAT+GGG - chr4_3:55407395-55407414 Msa0648880:three_prime_UTR 50.0%
!! GGTGCATTTGGTGCACCATT+AGG - chr4_3:55407572-55407591 Msa0648880:three_prime_UTR 50.0%
TGGGAAGGGCCCAAAACTTT+AGG + chr4_3:55407629-55407648 None:intergenic 50.0%
!!! CAAATGCGGCCGCTTTTATC+CGG + chr4_3:55408443-55408462 None:intergenic 50.0%
TTGTGCATAGCGGCCAAATG+CGG + chr4_3:55408457-55408476 None:intergenic 50.0%
!!! GCCGCGATAGCGGAATTTTT+GGG + chr4_3:55408513-55408532 None:intergenic 50.0%
TCGCAGTCGCAGAGAATTTG+GGG - chr4_3:55408756-55408775 Msa0648880:intron 50.0%
! ACGAGGGTGCATTTGGGTAA+TGG - chr4_3:55408836-55408855 Msa0648880:intron 50.0%
CAAGGCTGCACCATTATTGG+AGG - chr4_3:55409053-55409072 Msa0648880:intron 50.0%
TATGTGGCCATTAAGAGCCG+TGG - chr4_3:55409224-55409243 Msa0648880:intron 50.0%
TGGATAGCATGAGCGTGTAG+CGG - chr4_3:55409534-55409553 Msa0648880:three_prime_UTR 50.0%
CGGTGAATACCAAACAGTGC+AGG + chr4_3:55409691-55409710 None:intergenic 50.0%
TCACCGTGTCCAAAACCTCT+TGG - chr4_3:55409705-55409724 Msa0648880:three_prime_UTR 50.0%
!! TCTGGCTTTAACGGGAACCT+TGG - chr4_3:55409793-55409812 Msa0648880:three_prime_UTR 50.0%
TAACGGGAACCTTGGCACAA+CGG - chr4_3:55409801-55409820 Msa0648880:three_prime_UTR 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr4_3:55409834-55409853 Msa0648880:three_prime_UTR 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr4_3:55409835-55409854 Msa0648880:three_prime_UTR 50.0%
CAGTTAGAAAAAGGGCAGCC+CGG + chr4_3:55409970-55409989 None:intergenic 50.0%
GCCATCGTCTTCTTCTGTTC+AGG + chr4_3:55410144-55410163 None:intergenic 50.0%
GACGTTAGGGTTTGGCCATA+TGG - chr4_3:55410230-55410249 Msa0648880:intron 50.0%
TGGCAAATGCGTGTGAGAAG+AGG - chr4_3:55410274-55410293 Msa0648880:intron 50.0%
GGCAAATGCGTGTGAGAAGA+GGG - chr4_3:55410275-55410294 Msa0648880:intron 50.0%
! AGCTGTGCAGTTCAGGTTAG+CGG + chr4_3:55410464-55410483 None:intergenic 50.0%
TGGTAGTAGCTGTGCAGTTC+AGG + chr4_3:55410471-55410490 None:intergenic 50.0%
TGAATGAGCCGGTCTTCGTA+TGG - chr4_3:55410661-55410680 Msa0648880:three_prime_UTR 50.0%
GTGGGCCATCTTTCCTTAAC+GGG - chr4_3:55411865-55411884 Msa0648880:three_prime_UTR 50.0%
TGTCTCAGTCTCACCAAGGT+AGG - chr4_3:55411949-55411968 Msa0648880:intron 50.0%
GGCCGTCATTAGGAGTTAGT+TGG + chr4_3:55412073-55412092 None:intergenic 50.0%
TGGAGAGGCAAGATCGTGAA+AGG - chr4_3:55412433-55412452 Msa0648880:intron 50.0%
GCAAGATCGTGAAAGGCAGA+AGG - chr4_3:55412440-55412459 Msa0648880:intron 50.0%
TCGTGAAAGGCAGAAGGAAG+AGG - chr4_3:55412446-55412465 Msa0648880:intron 50.0%
ATTGCGTGAAAGACAGCGAG+AGG - chr4_3:55412476-55412495 Msa0648880:intron 50.0%
! GCGGGAGAAGTTTTTGCAGA+AGG - chr4_3:55412539-55412558 Msa0648880:intron 50.0%
GACAGAAGGAGGAACTACAG+AGG - chr4_3:55412671-55412690 Msa0648880:intron 50.0%
GGAACTACAGAGGGTGAAAG+AGG - chr4_3:55412681-55412700 Msa0648880:intron 50.0%
GTTGTGTTGGAGCTTTGCTC+TGG - chr4_3:55413527-55413546 Msa0648880:intron 50.0%
!! GCTGGTTAATGGGATTGGCT+TGG - chr4_3:55414465-55414484 Msa0648880:intron 50.0%
TTACTGCCTGAAAGGCCACA+AGG - chr4_3:55414500-55414519 Msa0648880:intron 50.0%
ATGCTGCAATTAGGCGGCTA+GGG + chr4_3:55415141-55415160 None:intergenic 50.0%
ACCCAGATGCTGCAATTAGG+CGG + chr4_3:55415147-55415166 None:intergenic 50.0%
GCAACCCAGATGCTGCAATT+AGG + chr4_3:55415150-55415169 None:intergenic 50.0%
GCCTAGATATATGGCCTGTG+TGG - chr4_3:55415233-55415252 Msa0648880:intron 50.0%
CCTGTGCTTGTCCAAACTGA+GGG - chr4_3:55415379-55415398 Msa0648880:intron 50.0%
GTATCTATGTTCGGGGACCA+GGG + chr4_3:55415452-55415471 None:intergenic 50.0%
AGTATCTATGTTCGGGGACC+AGG + chr4_3:55415453-55415472 None:intergenic 50.0%
GTTGCAAGAACACCCACTAC+TGG - chr4_3:55415619-55415638 Msa0648880:intron 50.0%
CAGTGTTACGAACTCTGGTG+GGG - chr4_3:55415660-55415679 Msa0648880:intron 50.0%
AGTGTTACGAACTCTGGTGG+GGG - chr4_3:55415661-55415680 Msa0648880:intron 50.0%
GGGCATCCTCAAGTAGTTGA+AGG - chr4_3:55415682-55415701 Msa0648880:intron 50.0%
GGTGCATCCTAGCAACAATG+AGG - chr4_3:55415927-55415946 Msa0648880:intron 50.0%
TGGGAGACCCACATATTGCT+TGG - chr4_3:55416349-55416368 Msa0648880:intron 50.0%
TTTCCCTGATTGTGAGAGGG+AGG + chr4_3:55416601-55416620 None:intergenic 50.0%
GGTGCAGAAGTAGCTGATGA+TGG - chr4_3:55417277-55417296 Msa0648880:intron 50.0%
TTGGTGAACCATGGGTGCAT+GGG - chr4_3:55417620-55417639 Msa0648880:five_prime_UTR 50.0%
GTACTCGGATCTTAGTGTGG+AGG - chr4_3:55417657-55417676 Msa0648880:intron 50.0%
! CACTGTTTTCCCCCCAATGA+TGG + chr4_3:55418009-55418028 None:intergenic 50.0%
ATCTGTTCACGCTGGTCACA+GGG + chr4_3:55418078-55418097 None:intergenic 50.0%
TATCTGTTCACGCTGGTCAC+AGG + chr4_3:55418079-55418098 None:intergenic 50.0%
CGTCTTCGATCCAAACCAAG+AGG + chr4_3:55418294-55418313 None:intergenic 50.0%
TGCAATGCTCCCACCATGAT+AGG - chr4_3:55418617-55418636 Msa0648880:intron 50.0%
GCAATGCTCCCACCATGATA+GGG - chr4_3:55418618-55418637 Msa0648880:intron 50.0%
TCCCACCATGATAGGGTTCA+AGG - chr4_3:55418625-55418644 Msa0648880:intron 50.0%
TCTCCCACTTCCTCTATACC+TGG - chr4_3:55419968-55419987 Msa0648880:intron 50.0%
GAGAGGGAAACCAGGTATAG+AGG + chr4_3:55419981-55420000 None:intergenic 50.0%
TTGCAGAGCTTCTTGGGGAA+GGG + chr4_3:55420507-55420526 None:intergenic 50.0%
GCTGGAAGCTTCCTCATCAA+CGG - chr4_3:55420568-55420587 Msa0648880:intron 50.0%
AATGGCACCCATGGAAGAAC+AGG + chr4_3:55420892-55420911 None:intergenic 50.0%
GCAGTTGTAAATGGCACCCA+TGG + chr4_3:55420901-55420920 None:intergenic 50.0%
GCCATTTACAACTGCTGCTG+TGG - chr4_3:55420906-55420925 Msa0648880:intron 50.0%
GCCACAGCAGCAGTTGTAAA+TGG + chr4_3:55420910-55420929 None:intergenic 50.0%
GCAGAAGCAAGAGACCAAGA+AGG - chr4_3:55420975-55420994 Msa0648880:intron 50.0%
TGTAAAGCTCTCACTGTGGC+GGG - chr4_3:55421085-55421104 Msa0648880:intron 50.0%
GCCAAAAATTCCTGCGATGC+TGG - chr4_3:55421340-55421359 Msa0648880:intron 50.0%
! GTAAAGAACTGGGGTGCTCT+TGG - chr4_3:55421397-55421416 Msa0648880:intron 50.0%
GTCCTCTGTTGAAGCTCTCA+AGG + chr4_3:55421429-55421448 None:intergenic 50.0%
AGAGGACAAAGGACTCGACA+AGG - chr4_3:55421442-55421461 Msa0648880:five_prime_UTR 50.0%
CGAGATCCACTTCCAGAAAG+AGG - chr4_3:55421512-55421531 Msa0648880:five_prime_UTR 50.0%
! AGTGCTCCTCTTTCTGGAAG+TGG + chr4_3:55421521-55421540 None:intergenic 50.0%
AGATGCAGTGCTCCTCTTTC+TGG + chr4_3:55421527-55421546 None:intergenic 50.0%
! GGATGGAAAGGCACACCAAA+CGG - chr4_3:55421574-55421593 Msa0648880:five_prime_UTR 50.0%
! AAAGGCACACCAAACGGACA+AGG - chr4_3:55421580-55421599 Msa0648880:five_prime_UTR 50.0%
!! CTTACCCTTCTGAGGCAACG+AGG - chr4_3:55407141-55407160 Msa0648880:three_prime_UTR 55.0%
!! TACCCTTCTGAGGCAACGAG+GGG - chr4_3:55407143-55407162 Msa0648880:three_prime_UTR 55.0%
GTTCTGTCACCGGAGACAGA+AGG - chr4_3:55407214-55407233 Msa0648880:three_prime_UTR 55.0%
CCGGAGACAGAAGGATCGAA+AGG - chr4_3:55407223-55407242 Msa0648880:three_prime_UTR 55.0%
! GGCCGAGTTTGGTTCCAATG+AGG - chr4_3:55407261-55407280 Msa0648880:three_prime_UTR 55.0%
CTACGAAAGCCCATCACCTC+AGG + chr4_3:55407392-55407411 None:intergenic 55.0%
!! CTGAGGTGATGGGCTTTCGT+AGG - chr4_3:55407390-55407409 Msa0648880:three_prime_UTR 55.0%
!! GGTGATGGGCTTTCGTAGGA+TGG - chr4_3:55407394-55407413 Msa0648880:three_prime_UTR 55.0%
GGGAGCTGCATTGCCTGAAA+TGG - chr4_3:55407415-55407434 Msa0648880:three_prime_UTR 55.0%
AGCTCGTGTATCGTCTGACG+AGG + chr4_3:55407461-55407480 None:intergenic 55.0%
GGGGAGCCGATAAGAGATGA+TGG - chr4_3:55407512-55407531 Msa0648880:three_prime_UTR 55.0%
TCTTTGCCGCTGGGTGCATT+TGG - chr4_3:55407560-55407579 Msa0648880:three_prime_UTR 55.0%
TATTTGTGGAGCGGCGCATC+TGG - chr4_3:55408407-55408426 Msa0648880:intron 55.0%
CGGATAAAAGCGGCCGCATT+TGG - chr4_3:55408441-55408460 Msa0648880:three_prime_UTR 55.0%
CGCGTGTCAGTTGTGCATAG+CGG + chr4_3:55408467-55408486 None:intergenic 55.0%
!!! CGCCGCGATAGCGGAATTTT+TGG + chr4_3:55408514-55408533 None:intergenic 55.0%
GCTGCACCATTATTGGAGGG+AGG - chr4_3:55409057-55409076 Msa0648880:intron 55.0%
GCACCATTATTGGAGGGAGG+AGG - chr4_3:55409060-55409079 Msa0648880:intron 55.0%
GCTCCTCCTCCCTCCAATAA+TGG + chr4_3:55409066-55409085 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr4_3:55409320-55409339 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr4_3:55409317-55409336 Msa0648880:three_prime_UTR 55.0%
GGATAGCATGAGCGTGTAGC+GGG - chr4_3:55409535-55409554 Msa0648880:three_prime_UTR 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_3:55409847-55409866 Msa0648880:three_prime_UTR 55.0%
! CAAATGGTGGAACCCCTTCC+CGG - chr4_3:55409916-55409935 Msa0648880:intron 55.0%
CTGAAGCTCCCGCATAAGCA+CGG + chr4_3:55409943-55409962 None:intergenic 55.0%
! ACAGAAGAAGACGATGGCGG+CGG - chr4_3:55410146-55410165 Msa0648880:intron 55.0%
ACGCTAACCGCTATAGCAGC+TGG - chr4_3:55410433-55410452 Msa0648880:intron 55.0%
AATTCCAGAGGCAGTGGCAG+TGG - chr4_3:55411356-55411375 Msa0648880:three_prime_UTR 55.0%
ATTCCAGAGGCAGTGGCAGT+GGG - chr4_3:55411357-55411376 Msa0648880:three_prime_UTR 55.0%
GCTCACGCCTCTGTTCTCTA+AGG + chr4_3:55412512-55412531 None:intergenic 55.0%
! TAGAGAACAGAGGCGTGAGC+AGG - chr4_3:55412512-55412531 Msa0648880:intron 55.0%
AGAGGGTGAAAGAGGCAGCA+AGG - chr4_3:55412689-55412708 Msa0648880:intron 55.0%
CTGTACAGACTTGGGTGGGA+AGG + chr4_3:55414344-55414363 None:intergenic 55.0%
TGCTGCAATTAGGCGGCTAG+GGG + chr4_3:55415140-55415159 None:intergenic 55.0%
GATGCTGCAATTAGGCGGCT+AGG + chr4_3:55415142-55415161 None:intergenic 55.0%
AGCCGCCTAATTGCAGCATC+TGG - chr4_3:55415142-55415161 Msa0648880:intron 55.0%
GCCGCCTAATTGCAGCATCT+GGG - chr4_3:55415143-55415162 Msa0648880:intron 55.0%
ATGTGTTGGGTGTGAAGGGG+TGG - chr4_3:55415196-55415215 Msa0648880:intron 55.0%
GTTTGGACAAGCACAGGCCA+AGG + chr4_3:55415376-55415395 None:intergenic 55.0%
GCCTGTGCTTGTCCAAACTG+AGG - chr4_3:55415378-55415397 Msa0648880:intron 55.0%
CCCTCAGTTTGGACAAGCAC+AGG + chr4_3:55415382-55415401 None:intergenic 55.0%
GTGTTACGAACTCTGGTGGG+GGG - chr4_3:55415662-55415681 Msa0648880:intron 55.0%
CCTGATTGTGAGAGGGAGGA+GGG + chr4_3:55416597-55416616 None:intergenic 55.0%
CCTCCTCCCTCTCACAATCA+GGG - chr4_3:55416595-55416614 Msa0648880:intron 55.0%
TCGGCTTCCTTCCAGAGCTA+GGG + chr4_3:55416935-55416954 None:intergenic 55.0%
GCAGAAGCTATAGCAGCCTC+TGG + chr4_3:55417112-55417131 None:intergenic 55.0%
CAGCTGCCAGGGAAAGAATC+AGG - chr4_3:55417233-55417252 Msa0648880:five_prime_UTR 55.0%
CTTGGTGAACCATGGGTGCA+TGG - chr4_3:55417619-55417638 Msa0648880:five_prime_UTR 55.0%
ACCATGGGTGCATGGGCTTA+CGG - chr4_3:55417627-55417646 Msa0648880:five_prime_UTR 55.0%
!! GCTTACGGAGGGAGAGTACT+CGG - chr4_3:55417642-55417661 Msa0648880:intron 55.0%
ATCAGAGGGAGAGGGAAACC+AGG + chr4_3:55419989-55420008 None:intergenic 55.0%
GTTGCAGAGCTTCTTGGGGA+AGG + chr4_3:55420508-55420527 None:intergenic 55.0%
! CAACTGCTGCTGTGGCTCTA+AGG - chr4_3:55420914-55420933 Msa0648880:intron 55.0%
!! TGCTGTGGCTCTAAGGCTCA+TGG - chr4_3:55420921-55420940 Msa0648880:intron 55.0%
GGTCTCTTGCTTCTGCTGTG+AGG + chr4_3:55420971-55420990 None:intergenic 55.0%
TTCAATCGCACCAGCATCGC+AGG + chr4_3:55421353-55421372 None:intergenic 55.0%
GGCCTTGAGAGCTTCAACAG+AGG - chr4_3:55421424-55421443 Msa0648880:intron 55.0%
!! GGAGCACTGCATCTAACAGC+AGG - chr4_3:55421533-55421552 Msa0648880:five_prime_UTR 55.0%
CGAGTGTGTCCTTGTCCGTT+TGG + chr4_3:55421592-55421611 None:intergenic 55.0%
AACGGACAAGGACACACTCG+TGG - chr4_3:55421592-55421611 Msa0648880:five_prime_UTR 55.0%
GACAAGGACACACTCGTGGT+CGG - chr4_3:55421596-55421615 Msa0648880:five_prime_UTR 55.0%
!! GTCGGAGGAGTATCAGAAGC+AGG - chr4_3:55421614-55421633 Msa0648880:five_prime_UTR 55.0%
CACCCCTCGTTGCCTCAGAA+GGG + chr4_3:55407148-55407167 None:intergenic 60.0%
TCACCCCTCGTTGCCTCAGA+AGG + chr4_3:55407149-55407168 None:intergenic 60.0%
GGATCGAAAGGCTGTGGCAC+CGG - chr4_3:55407235-55407254 Msa0648880:three_prime_UTR 60.0%
AAGCCCATCACCTCAGGCAG+CGG + chr4_3:55407386-55407405 None:intergenic 60.0%
GGTGCACCAAATGCACCCAG+CGG + chr4_3:55407569-55407588 None:intergenic 60.0%
GTCAATGCGGAAATGCGGCG+CGG - chr4_3:55408016-55408035 Msa0648880:three_prime_UTR 60.0%
TCAATGCGGAAATGCGGCGC+GGG - chr4_3:55408017-55408036 Msa0648880:three_prime_UTR 60.0%
! CGCTTTTATCCGGTGCGGTG+CGG + chr4_3:55408433-55408452 None:intergenic 60.0%
CGCACCGCACCGGATAAAAG+CGG - chr4_3:55408431-55408450 Msa0648880:three_prime_UTR 60.0%
ATTGGAGGGAGGAGGAGCTG+AGG - chr4_3:55409068-55409087 Msa0648880:intron 60.0%
GAGGAGGAGCTGAGGTTGGA+CGG - chr4_3:55409076-55409095 Msa0648880:intron 60.0%
! GTCAATCCCGGATAGTGGCG+CGG - chr4_3:55409492-55409511 Msa0648880:three_prime_UTR 60.0%
CGGGAAGGGGTTCCACCATT+TGG + chr4_3:55409918-55409937 None:intergenic 60.0%
CATAAGCACGGTCCGGGAAG+GGG + chr4_3:55409931-55409950 None:intergenic 60.0%
GCATAAGCACGGTCCGGGAA+GGG + chr4_3:55409932-55409951 None:intergenic 60.0%
CTTCCCGGACCGTGCTTATG+CGG - chr4_3:55409931-55409950 Msa0648880:intron 60.0%
TTCCCGGACCGTGCTTATGC+GGG - chr4_3:55409932-55409951 Msa0648880:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr4_3:55409948-55409967 Msa0648880:intron 60.0%
ATGGCGGCGGCATCAATCAG+CGG - chr4_3:55410159-55410178 Msa0648880:intron 60.0%
AGCGGCAGCGATGACAACCT+GGG - chr4_3:55410177-55410196 Msa0648880:intron 60.0%
! GCGTGTAATGGGGCGGGTAT+CGG + chr4_3:55410417-55410436 None:intergenic 60.0%
! CGGTTAGCGTGTAATGGGGC+GGG + chr4_3:55410423-55410442 None:intergenic 60.0%
! GCGGTTAGCGTGTAATGGGG+CGG + chr4_3:55410424-55410443 None:intergenic 60.0%
GGCTGCTCCAGCTGCTATAG+CGG + chr4_3:55410443-55410462 None:intergenic 60.0%
TTCCAGAGGCAGTGGCAGTG+GGG - chr4_3:55411358-55411377 Msa0648880:three_prime_UTR 60.0%
GGCACTAGACGGCCGTCATT+AGG + chr4_3:55412083-55412102 None:intergenic 60.0%
GCGTGAAAGACAGCGAGAGG+AGG - chr4_3:55412479-55412498 Msa0648880:intron 60.0%
GAGAGCTGCTGCTCGCAGAA+TGG - chr4_3:55412729-55412748 Msa0648880:intron 60.0%
CTAGGGGTGGACCGCAATGA+AGG + chr4_3:55415124-55415143 None:intergenic 60.0%
TGCAATTAGGCGGCTAGGGG+TGG + chr4_3:55415137-55415156 None:intergenic 60.0%
! GGTGTTGGAGGCTGCAACGA+AGG + chr4_3:55415172-55415191 None:intergenic 60.0%
CCCTCCTCCCTCTCACAATC+AGG - chr4_3:55416594-55416613 Msa0648880:intron 60.0%
CCCTGATTGTGAGAGGGAGG+AGG + chr4_3:55416598-55416617 None:intergenic 60.0%
CTCGGCTTCCTTCCAGAGCT+AGG + chr4_3:55416936-55416955 None:intergenic 60.0%
!! CTAGCTCTGGAAGGAAGCCG+AGG - chr4_3:55416934-55416953 Msa0648880:CDS 60.0%
TCCGTAAGCCCATGCACCCA+TGG + chr4_3:55417631-55417650 None:intergenic 60.0%
ATGGGTGCATGGGCTTACGG+AGG - chr4_3:55417630-55417649 Msa0648880:five_prime_UTR 60.0%
TGGGTGCATGGGCTTACGGA+GGG - chr4_3:55417631-55417650 Msa0648880:five_prime_UTR 60.0%
GAGAATGAAGGGGGGCCACA+AGG + chr4_3:55418748-55418767 None:intergenic 60.0%
GGAGCACAAGCCCTGAGCAT+TGG - chr4_3:55420205-55420224 Msa0648880:intron 60.0%
! AACTGGGGTGCTCTTGGTGC+TGG - chr4_3:55421403-55421422 Msa0648880:intron 60.0%
CAAGGCCGCAGCCATTCTCT+TGG - chr4_3:55421460-55421479 Msa0648880:five_prime_UTR 60.0%
AAGGACACACTCGTGGTCGG+AGG - chr4_3:55421599-55421618 Msa0648880:five_prime_UTR 60.0%
!! GAAAGGCTGTGGCACCGGCT+GGG - chr4_3:55407240-55407259 Msa0648880:three_prime_UTR 65.0%
GGAACCAAACTCGGCCCAGC+CGG + chr4_3:55407257-55407276 None:intergenic 65.0%
! TGTGCCGCTGCCTGAGGTGA+TGG - chr4_3:55407379-55407398 Msa0648880:three_prime_UTR 65.0%
! GTGCCGCTGCCTGAGGTGAT+GGG - chr4_3:55407380-55407399 Msa0648880:three_prime_UTR 65.0%
CAATGCGGAAATGCGGCGCG+GGG - chr4_3:55408018-55408037 Msa0648880:three_prime_UTR 65.0%
!!! GCGGCCGCTTTTATCCGGTG+CGG + chr4_3:55408438-55408457 None:intergenic 65.0%
ACAACTGACACGCGCCGTCG+CGG - chr4_3:55408473-55408492 Msa0648880:three_prime_UTR 65.0%
GAGGGAGGAGGAGCTGAGGT+TGG - chr4_3:55409072-55409091 Msa0648880:intron 65.0%
! GAGCGGCTGGCCCCAAAAGT+TGG - chr4_3:55409514-55409533 Msa0648880:three_prime_UTR 65.0%
CGCATAAGCACGGTCCGGGA+AGG + chr4_3:55409933-55409952 None:intergenic 65.0%
CTCCCGCATAAGCACGGTCC+GGG + chr4_3:55409937-55409956 None:intergenic 65.0%
GCTCCCGCATAAGCACGGTC+CGG + chr4_3:55409938-55409957 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr4_3:55409949-55409968 Msa0648880:intron 65.0%
CAGCGGCAGCGATGACAACC+TGG - chr4_3:55410176-55410195 Msa0648880:intron 65.0%
GGCAGCGATGACAACCTGGG+CGG - chr4_3:55410180-55410199 Msa0648880:intron 65.0%
AGCGATGACAACCTGGGCGG+CGG - chr4_3:55410183-55410202 Msa0648880:intron 65.0%
! AGAGGCGTGAGCAGGAGCAG+CGG - chr4_3:55412520-55412539 Msa0648880:intron 65.0%
GGGGTGGACCGCAATGAAGG+TGG + chr4_3:55415121-55415140 None:intergenic 65.0%
! AGGGAGGAGGGCGACTGGTT+TGG + chr4_3:55416585-55416604 None:intergenic 65.0%
!! CTCTCACTGTGGCGGGTCCA+GGG - chr4_3:55421092-55421111 Msa0648880:intron 65.0%
!! CGAAAGGCTGTGGCACCGGC+TGG - chr4_3:55407239-55407258 Msa0648880:three_prime_UTR 70.0%
! GGGAGTTGTGCCGCTGCCTG+AGG - chr4_3:55407373-55407392 Msa0648880:three_prime_UTR 70.0%
! GGGGTGCGGGCGCTTTTCAC+TGG - chr4_3:55408037-55408056 Msa0648880:three_prime_UTR 70.0%
! GCGGGCGCTTTTCACTGGCG+CGG - chr4_3:55408042-55408061 Msa0648880:three_prime_UTR 70.0%
TTCTCCGCGTCCGTCCGCGA+CGG + chr4_3:55408490-55408509 None:intergenic 70.0%
TCCGCTATCGCGGCGCGAAG+CGG - chr4_3:55408519-55408538 Msa0648880:intron 70.0%
GGTGGTCGGGGTTCGAACCC+CGG + chr4_3:55409371-55409390 None:intergenic 70.0%
! TCCCGGATAGTGGCGCGGAG+CGG - chr4_3:55409497-55409516 Msa0648880:three_prime_UTR 70.0%
AGCCGCTCCGCGCCACTATC+CGG + chr4_3:55409502-55409521 None:intergenic 70.0%
TGCCCCACTGCCACTGCCTC+TGG + chr4_3:55411363-55411382 None:intergenic 70.0%
GAGGCGTGAGCAGGAGCAGC+GGG - chr4_3:55412521-55412540 Msa0648880:intron 70.0%
GCGAGCAGCAGCTCTCTCGC+TGG + chr4_3:55412725-55412744 None:intergenic 70.0%
GTGAGAGGGAGGAGGGCGAC+TGG + chr4_3:55416590-55416609 None:intergenic 70.0%
!! GCTCTCACTGTGGCGGGTCC+AGG - chr4_3:55421091-55421110 Msa0648880:intron 70.0%
!! ACTGTGGCGGGTCCAGGGAG+TGG - chr4_3:55421097-55421116 Msa0648880:intron 70.0%
!! GGCACCGGCTGGGCCGAGTT+TGG - chr4_3:55407250-55407269 Msa0648880:three_prime_UTR 75.0%
CGGAAATGCGGCGCGGGGTG+CGG - chr4_3:55408023-55408042 Msa0648880:three_prime_UTR 75.0%
GGAAATGCGGCGCGGGGTGC+GGG - chr4_3:55408024-55408043 Msa0648880:three_prime_UTR 75.0%
CGCATCTGGCCGCACCGCAC+CGG - chr4_3:55408421-55408440 Msa0648880:three_prime_UTR 75.0%
CTGACACGCGCCGTCGCGGA+CGG - chr4_3:55408477-55408496 Msa0648880:three_prime_UTR 75.0%
CCCGCTTCGCGCCGCGATAG+CGG + chr4_3:55408523-55408542 None:intergenic 75.0%
CCGCTATCGCGGCGCGAAGC+GGG - chr4_3:55408520-55408539 Msa0648880:intron 75.0%
GCCGCTCCGCGCCACTATCC+GGG + chr4_3:55409501-55409520 None:intergenic 75.0%
! GGATAGTGGCGCGGAGCGGC+TGG - chr4_3:55409501-55409520 Msa0648880:three_prime_UTR 75.0%
!! CACTGCATCGGCCGCCGCCC+AGG + chr4_3:55410197-55410216 None:intergenic 80.0%
! CGCGCCGTCGCGGACGGACG+CGG - chr4_3:55408483-55408502 Msa0648880:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 55406579 55422439 55406579 ID=Msa0648880;Name=Msa0648880
chr4_3 mRNA 55406579 55422439 55406579 ID=Msa0648880-mRNA-1;Parent=Msa0648880;Name=Msa0648880-mRNA-1;_AED=0.11;_eAED=0.11;_QI=1374|0.94|0.94|1|0.83|0.78|19|3723|259
chr4_3 exon 55406579 55406737 55406579 ID=Msa0648880-mRNA-1:exon:14204;Parent=Msa0648880-mRNA-1
chr4_3 exon 55406883 55407702 55406883 ID=Msa0648880-mRNA-1:exon:14203;Parent=Msa0648880-mRNA-1
chr4_3 exon 55407998 55408261 55407998 ID=Msa0648880-mRNA-1:exon:14202;Parent=Msa0648880-mRNA-1
chr4_3 exon 55408414 55408518 55408414 ID=Msa0648880-mRNA-1:exon:14201;Parent=Msa0648880-mRNA-1
chr4_3 exon 55409259 55409894 55409259 ID=Msa0648880-mRNA-1:exon:14200;Parent=Msa0648880-mRNA-1
chr4_3 exon 55410596 55411156 55410596 ID=Msa0648880-mRNA-1:exon:14199;Parent=Msa0648880-mRNA-1
chr4_3 exon 55411268 55411945 55411268 ID=Msa0648880-mRNA-1:exon:14198;Parent=Msa0648880-mRNA-1
chr4_3 exon 55412028 55412237 55412028 ID=Msa0648880-mRNA-1:exon:14197;Parent=Msa0648880-mRNA-1
chr4_3 exon 55413070 55413222 55413070 ID=Msa0648880-mRNA-1:exon:14196;Parent=Msa0648880-mRNA-1
chr4_3 exon 55413313 55413465 55413313 ID=Msa0648880-mRNA-1:exon:14195;Parent=Msa0648880-mRNA-1
chr4_3 exon 55414044 55414051 55414044 ID=Msa0648880-mRNA-1:exon:14194;Parent=Msa0648880-mRNA-1
chr4_3 exon 55414589 55414689 55414589 ID=Msa0648880-mRNA-1:exon:14193;Parent=Msa0648880-mRNA-1
chr4_3 exon 55416138 55416360 55416138 ID=Msa0648880-mRNA-1:exon:14192;Parent=Msa0648880-mRNA-1
chr4_3 exon 55416446 55416610 55416446 ID=Msa0648880-mRNA-1:exon:14191;Parent=Msa0648880-mRNA-1
chr4_3 exon 55416699 55416788 55416699 ID=Msa0648880-mRNA-1:exon:14190;Parent=Msa0648880-mRNA-1
chr4_3 exon 55416858 55417292 55416858 ID=Msa0648880-mRNA-1:exon:14189;Parent=Msa0648880-mRNA-1
chr4_3 exon 55417457 55417654 55417457 ID=Msa0648880-mRNA-1:exon:14188;Parent=Msa0648880-mRNA-1
chr4_3 exon 55421425 55421883 55421425 ID=Msa0648880-mRNA-1:exon:14187;Parent=Msa0648880-mRNA-1
chr4_3 exon 55421981 55422439 55421981 ID=Msa0648880-mRNA-1:exon:14186;Parent=Msa0648880-mRNA-1
chr4_3 five_prime_UTR 55421981 55422439 55421981 ID=Msa0648880-mRNA-1:five_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 five_prime_UTR 55421425 55421883 55421425 ID=Msa0648880-mRNA-1:five_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 five_prime_UTR 55417457 55417654 55417457 ID=Msa0648880-mRNA-1:five_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 five_prime_UTR 55417035 55417292 55417035 ID=Msa0648880-mRNA-1:five_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55416858 55417034 55416858 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55416699 55416788 55416699 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55416446 55416610 55416446 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55416138 55416360 55416138 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55414589 55414689 55414589 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55414044 55414051 55414044 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 CDS 55413450 55413465 55413450 ID=Msa0648880-mRNA-1:cds;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55413313 55413449 55413313 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55413070 55413222 55413070 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55412028 55412237 55412028 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55411268 55411945 55411268 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55410596 55411156 55410596 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55409259 55409894 55409259 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55408414 55408518 55408414 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55407998 55408261 55407998 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55406883 55407702 55406883 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
chr4_3 three_prime_UTR 55406579 55406737 55406579 ID=Msa0648880-mRNA-1:three_prime_utr;Parent=Msa0648880-mRNA-1
Gene Sequence

>Msa0648880

ATGCTTTCTGCTTCAGGAGGAAATGATGATATTCTAAGAAAGAACCCATTTGTCGATGTAACTCTTGAGACTCGAATGAGGGCTCACCAACTAACTCCTAATGACGGCCGTCTAGTGCCATTTGATAGTAGGGTTATTCATGAGGAGGAATTTTCAAGGTTTCAAAGGAAGCGAAAGAATGAAGAGGCTAGAATGCAACGAGAACTTGAAGTGCAAGAGAAAAGAATTAGAAAAGAGCTTGTAAAACAGGAAATTTTAAGGCAAAAGAGAGAGGAGCAGATAAAAAAAGAGATGGAGAGGCAAGATCGTGAAAGGCAGAAGGAAGAGGAAAGGTTATTGCGTGAAAGACAGCGAGAGGAGGAGAGATTCCTTAGAGAACAGAGGCGTGAGCAGGAGCAGCGGGAGAAGTTTTTGCAGAAGGAATCAATCAGAATTGAGAAACTGAGACAGAAGGAGGAACTACAGAGGGTGAAAGAGGCAGCAAGGATTAAAGCTGCCAGCGAGAGAGCTGCTGCTCGCAGAATGGTCAAAGACGCAATGGACCTTATTGAAGATGAACGTCTGGAACTCATGGAATTAGCTGCATCAAAGAAGGGGTTATCTTCAATACTGGCTCTTGACTACGAAACTATGCAAAATCTGGAATCATATCGAGATGGGCAGGCTTCCTTCCCACCCAAGTCTGTACAGTTAAAAAGAGCCTTTTCGATTCAACCTTGGTCAGATTCTGACGAGAATGTTGGAAATCTTCTGATGGTTTGGAGGACCCTAGAATATTAG
Protein sequence

>Msa0648880

MLSASGGNDDILRKNPFVDVTLETRMRAHQLTPNDGRLVPFDSRVIHEEEFSRFQRKRKNEEARMQRELEVQEKRIRKELVKQEILRQKREEQIKKEMERQDRERQKEEERLLRERQREEERFLREQRREQEQREKFLQKESIRIEKLRQKEELQRVKEAARIKAASERAAARRMVKDAMDLIEDERLELMELAASKKGLSSILALDYETMQNLESYRDGQASFPPKSVQLKRAFSIQPWSDSDENVGNLLMVWRTLEY*