AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 32 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTCATCTCTTGGTCCT+TGG 0.309835 2_1:-72325559 None:intergenic
ATATTCAGATGGCAAGGTTT+TGG 0.323652 2_1:+72325618 Msa0222890:CDS
ATGAAAGGGATTACATATTC+AGG 0.353937 2_1:+72325573 Msa0222890:CDS
ATCTCTTGGTCCTTGGTGCA+TGG 0.358552 2_1:-72325552 None:intergenic
TGGTCCTTGGTGCATGGACC+AGG 0.397324 2_1:-72325546 None:intergenic
TTGGCTTCACAATGTACCTT+CGG 0.403077 2_1:+72325361 Msa0222890:CDS
AGGTGAGGATTCCCTGCCTT+TGG 0.403944 2_1:+72324284 Msa0222890:CDS
GGTTCCAAGCTAAAAGCTTT+CGG 0.407241 2_1:-72325525 None:intergenic
ATGTAATCCCTTTCATCTCT+TGG 0.434355 2_1:-72325566 None:intergenic
ATGTAATCCCTTCCTTCTCT+TGG 0.440627 2_1:-72325597 None:intergenic
TGGCTTCACAATGTACCTTC+GGG 0.451934 2_1:+72325362 Msa0222890:CDS
CCAAGGACCAAGAGATGAAA+GGG 0.465404 2_1:+72325559 Msa0222890:CDS
AGACTTCTATTCACACTAGT+AGG 0.466010 2_1:-72325656 None:intergenic
GGAGATAAGTGCTGGTGGCT+TGG 0.470552 2_1:+72324305 Msa0222890:CDS
ATAAGTGCTGGTGGCTTGGT+TGG 0.479016 2_1:+72324309 Msa0222890:CDS
CTGCCTTTGGAGATAAGTGC+TGG 0.499956 2_1:+72324297 Msa0222890:CDS
CCAGCTTCAGTTGTTATGAA+AGG 0.517495 2_1:+72324264 None:intergenic
CAGCACTTATCTCCAAAGGC+AGG 0.522101 2_1:-72324296 None:intergenic
TTCAGGACCAAGAGAAGGAA+GGG 0.533095 2_1:+72325590 Msa0222890:CDS
GATTACATATTCAGATGGCA+AGG 0.573196 2_1:+72325612 Msa0222890:CDS
GAAGGGATTACATATTCAGA+TGG 0.593397 2_1:+72325607 Msa0222890:CDS
ATTCAGGACCAAGAGAAGGA+AGG 0.598423 2_1:+72325589 Msa0222890:CDS
TTCAGTTGTTATGAAAGGTG+AGG 0.600368 2_1:+72324269 None:intergenic
ACCAAGGACCAAGAGATGAA+AGG 0.604348 2_1:+72325558 Msa0222890:CDS
AAAGACACAATCGCAACACA+TGG 0.606302 2_1:+72325389 Msa0222890:CDS
ACATATTCAGGACCAAGAGA+AGG 0.621450 2_1:+72325585 Msa0222890:CDS
CCACCAGCACTTATCTCCAA+AGG 0.627347 2_1:-72324300 None:intergenic
AATCGCAACACATGGCGCAA+AGG 0.628239 2_1:+72325397 Msa0222890:CDS
AGCACTTATCTCCAAAGGCA+GGG 0.632159 2_1:-72324295 None:intergenic
CCTTTGGAGATAAGTGCTGG+TGG 0.633684 2_1:+72324300 Msa0222890:CDS
ATTGTGTCTTTAGCACCCGA+AGG 0.652031 2_1:-72325377 None:intergenic
GGAACCTGGTCCATGCACCA+AGG 0.700852 2_1:+72325542 Msa0222890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTATTGTATCTTTTA+CGG + chr2_1:72325173-72325192 Msa0222890:intron 10.0%
!!! TAATATTATTGTATCTTTTA+CGG + chr2_1:72325173-72325192 Msa0222890:intron 10.0%
!! ACAAAAAAATATTAAAGAGA+AGG - chr2_1:72324687-72324706 None:intergenic 15.0%
!! ACAAAAAAATATTAAAGAGA+AGG - chr2_1:72324687-72324706 None:intergenic 15.0%
!! TTAAAAAACAAATATGCTTT+GGG - chr2_1:72324925-72324944 None:intergenic 15.0%
!! ATTAAAAAACAAATATGCTT+TGG - chr2_1:72324926-72324945 None:intergenic 15.0%
!! TATTGAATATACTAAAACTT+GGG - chr2_1:72324996-72325015 None:intergenic 15.0%
!! TTATTGAATATACTAAAACT+TGG - chr2_1:72324997-72325016 None:intergenic 15.0%
!!! AAGTTTTAGTATATTCAATA+AGG + chr2_1:72324996-72325015 Msa0222890:intron 15.0%
!!! AGTTTTAGTATATTCAATAA+GGG + chr2_1:72324997-72325016 Msa0222890:intron 15.0%
!!! TTTAAAATTTCAAGAAGTTA+TGG + chr2_1:72325076-72325095 Msa0222890:intron 15.0%
!! GATAATTTATAATTTCTTGA+TGG - chr2_1:72325144-72325163 None:intergenic 15.0%
!! GATACAATAATATTATAATG+AGG - chr2_1:72325168-72325187 None:intergenic 15.0%
!! AGAAATAGTTAACTATTAAA+GGG + chr2_1:72325220-72325239 Msa0222890:intron 15.0%
!! ACAAAAAAATATTAAAGAGA+AGG - chr2_1:72324687-72324706 None:intergenic 15.0%
!! ACAAAAAAATATTAAAGAGA+AGG - chr2_1:72324687-72324706 None:intergenic 15.0%
!! TTAAAAAACAAATATGCTTT+GGG - chr2_1:72324925-72324944 None:intergenic 15.0%
!! ATTAAAAAACAAATATGCTT+TGG - chr2_1:72324926-72324945 None:intergenic 15.0%
!! TATTGAATATACTAAAACTT+GGG - chr2_1:72324996-72325015 None:intergenic 15.0%
!! TTATTGAATATACTAAAACT+TGG - chr2_1:72324997-72325016 None:intergenic 15.0%
!!! AAGTTTTAGTATATTCAATA+AGG + chr2_1:72324996-72325015 Msa0222890:intron 15.0%
!!! AGTTTTAGTATATTCAATAA+GGG + chr2_1:72324997-72325016 Msa0222890:intron 15.0%
!!! TTTAAAATTTCAAGAAGTTA+TGG + chr2_1:72325076-72325095 Msa0222890:intron 15.0%
!! GATAATTTATAATTTCTTGA+TGG - chr2_1:72325144-72325163 None:intergenic 15.0%
!! GATACAATAATATTATAATG+AGG - chr2_1:72325168-72325187 None:intergenic 15.0%
!! AGAAATAGTTAACTATTAAA+GGG + chr2_1:72325220-72325239 Msa0222890:intron 15.0%
!!! TTCAGTTTTAGTTTATTATC+TGG + chr2_1:72324384-72324403 Msa0222890:intron 20.0%
!! ACAGTTAAACTATCTAATAA+AGG - chr2_1:72324611-72324630 None:intergenic 20.0%
!! TTATTAGATAGTTTAACTGT+TGG + chr2_1:72324611-72324630 Msa0222890:intron 20.0%
!! AACAAAAACAAATATGCTTT+GGG - chr2_1:72324779-72324798 None:intergenic 20.0%
!! ATTGAATATACTAAAACTTG+GGG - chr2_1:72324995-72325014 None:intergenic 20.0%
!! GAGAAATAGTTAACTATTAA+AGG + chr2_1:72325219-72325238 Msa0222890:intron 20.0%
!!! ATATTTTCCAAGTTTATTTC+AGG - chr2_1:72325306-72325325 None:intergenic 20.0%
!!! ATGTACTTTTTATTAGTGTT+TGG + chr2_1:72325342-72325361 Msa0222890:intron 20.0%
!!! TTCAGTTTTAGTTTATTATC+TGG + chr2_1:72324384-72324403 Msa0222890:intron 20.0%
!! ACAGTTAAACTATCTAATAA+AGG - chr2_1:72324611-72324630 None:intergenic 20.0%
!! TTATTAGATAGTTTAACTGT+TGG + chr2_1:72324611-72324630 Msa0222890:intron 20.0%
!! AACAAAAACAAATATGCTTT+GGG - chr2_1:72324779-72324798 None:intergenic 20.0%
!! ATTGAATATACTAAAACTTG+GGG - chr2_1:72324995-72325014 None:intergenic 20.0%
!! GAGAAATAGTTAACTATTAA+AGG + chr2_1:72325219-72325238 Msa0222890:intron 20.0%
!!! ATATTTTCCAAGTTTATTTC+AGG - chr2_1:72325306-72325325 None:intergenic 20.0%
!!! ATGTACTTTTTATTAGTGTT+TGG + chr2_1:72325342-72325361 Msa0222890:intron 20.0%
!! TTTTGAATCTGTTCTAATTG+TGG + chr2_1:72324714-72324733 Msa0222890:intron 25.0%
! CAACAAAAACAAATATGCTT+TGG - chr2_1:72324780-72324799 None:intergenic 25.0%
!! TTTTGAATCTGTTCTAATTG+TGG + chr2_1:72324714-72324733 Msa0222890:intron 25.0%
!!! GTTTTTTAATTCAGAGATCT+TGG + chr2_1:72324936-72324955 Msa0222890:intron 25.0%
! ATGAAAAGTGAAAAAGAAAG+AGG + chr2_1:72325029-72325048 Msa0222890:intron 25.0%
! GTTTATACTGATCATTGAAT+TGG + chr2_1:72325195-72325214 Msa0222890:intron 25.0%
!! TTTTGAATCTGTTCTAATTG+TGG + chr2_1:72324714-72324733 Msa0222890:intron 25.0%
! CAACAAAAACAAATATGCTT+TGG - chr2_1:72324780-72324799 None:intergenic 25.0%
!! TTTTGAATCTGTTCTAATTG+TGG + chr2_1:72324714-72324733 Msa0222890:intron 25.0%
!!! GTTTTTTAATTCAGAGATCT+TGG + chr2_1:72324936-72324955 Msa0222890:intron 25.0%
! ATGAAAAGTGAAAAAGAAAG+AGG + chr2_1:72325029-72325048 Msa0222890:intron 25.0%
! GTTTATACTGATCATTGAAT+TGG + chr2_1:72325195-72325214 Msa0222890:intron 25.0%
TTTCTATACACACAACTTCA+AGG + chr2_1:72324567-72324586 Msa0222890:intron 30.0%
TTCTATACACACAACTTCAA+GGG + chr2_1:72324568-72324587 Msa0222890:intron 30.0%
!! ATGCTTCTTCAATTGCTTTT+TGG - chr2_1:72324964-72324983 None:intergenic 30.0%
GAAGTTATGGTATTTGTCAT+CGG + chr2_1:72325089-72325108 Msa0222890:intron 30.0%
TCAATGACCTGAAATAAACT+TGG + chr2_1:72325296-72325315 Msa0222890:intron 30.0%
TTCACACAAAATGATATGCT+CGG - chr2_1:72325445-72325464 None:intergenic 30.0%
GCAAACTTTATCAAACTGAA+TGG - chr2_1:72325476-72325495 None:intergenic 30.0%
ATGAAAGGGATTACATATTC+AGG + chr2_1:72325573-72325592 Msa0222890:CDS 30.0%
TTTCTATACACACAACTTCA+AGG + chr2_1:72324567-72324586 Msa0222890:intron 30.0%
TTCTATACACACAACTTCAA+GGG + chr2_1:72324568-72324587 Msa0222890:intron 30.0%
!! ATGCTTCTTCAATTGCTTTT+TGG - chr2_1:72324964-72324983 None:intergenic 30.0%
GAAGTTATGGTATTTGTCAT+CGG + chr2_1:72325089-72325108 Msa0222890:intron 30.0%
TCAATGACCTGAAATAAACT+TGG + chr2_1:72325296-72325315 Msa0222890:intron 30.0%
TTCACACAAAATGATATGCT+CGG - chr2_1:72325445-72325464 None:intergenic 30.0%
GCAAACTTTATCAAACTGAA+TGG - chr2_1:72325476-72325495 None:intergenic 30.0%
ATGAAAGGGATTACATATTC+AGG + chr2_1:72325573-72325592 Msa0222890:CDS 30.0%
CTGTTAGTATGAAAATGCGA+AGG + chr2_1:72324431-72324450 Msa0222890:intron 35.0%
AAATGGAGGAATCAATCAAG+AGG - chr2_1:72324747-72324766 None:intergenic 35.0%
TTGGGTTAAAGAGAAAATGG+AGG - chr2_1:72324761-72324780 None:intergenic 35.0%
! GCTTTGGGTTAAAGAGAAAA+TGG - chr2_1:72324764-72324783 None:intergenic 35.0%
AAATGGAGGAATCAATCAAG+AGG - chr2_1:72324747-72324766 None:intergenic 35.0%
TTGGGTTAAAGAGAAAATGG+AGG - chr2_1:72324761-72324780 None:intergenic 35.0%
! GCTTTGGGTTAAAGAGAAAA+TGG - chr2_1:72324764-72324783 None:intergenic 35.0%
AACAACAATGATCCAAGTGA+AGG + chr2_1:72325243-72325262 Msa0222890:intron 35.0%
ACAACAATGATCCAAGTGAA+GGG + chr2_1:72325244-72325263 Msa0222890:intron 35.0%
TCACACAAAATGATATGCTC+GGG - chr2_1:72325444-72325463 None:intergenic 35.0%
ATGTAATCCCTTTCATCTCT+TGG - chr2_1:72325569-72325588 None:intergenic 35.0%
GAAGGGATTACATATTCAGA+TGG + chr2_1:72325607-72325626 Msa0222890:CDS 35.0%
GATTACATATTCAGATGGCA+AGG + chr2_1:72325612-72325631 Msa0222890:CDS 35.0%
! ATATTCAGATGGCAAGGTTT+TGG + chr2_1:72325618-72325637 Msa0222890:CDS 35.0%
CTGTTAGTATGAAAATGCGA+AGG + chr2_1:72324431-72324450 Msa0222890:intron 35.0%
AAATGGAGGAATCAATCAAG+AGG - chr2_1:72324747-72324766 None:intergenic 35.0%
TTGGGTTAAAGAGAAAATGG+AGG - chr2_1:72324761-72324780 None:intergenic 35.0%
! GCTTTGGGTTAAAGAGAAAA+TGG - chr2_1:72324764-72324783 None:intergenic 35.0%
AAATGGAGGAATCAATCAAG+AGG - chr2_1:72324747-72324766 None:intergenic 35.0%
TTGGGTTAAAGAGAAAATGG+AGG - chr2_1:72324761-72324780 None:intergenic 35.0%
! GCTTTGGGTTAAAGAGAAAA+TGG - chr2_1:72324764-72324783 None:intergenic 35.0%
AACAACAATGATCCAAGTGA+AGG + chr2_1:72325243-72325262 Msa0222890:intron 35.0%
ACAACAATGATCCAAGTGAA+GGG + chr2_1:72325244-72325263 Msa0222890:intron 35.0%
TCACACAAAATGATATGCTC+GGG - chr2_1:72325444-72325463 None:intergenic 35.0%
ATGTAATCCCTTTCATCTCT+TGG - chr2_1:72325569-72325588 None:intergenic 35.0%
GAAGGGATTACATATTCAGA+TGG + chr2_1:72325607-72325626 Msa0222890:CDS 35.0%
GATTACATATTCAGATGGCA+AGG + chr2_1:72325612-72325631 Msa0222890:CDS 35.0%
! ATATTCAGATGGCAAGGTTT+TGG + chr2_1:72325618-72325637 Msa0222890:CDS 35.0%
! TCTTTTAGGCATCTGGTGAT+AGG + chr2_1:72324339-72324358 Msa0222890:CDS 40.0%
GTATGAAAATGCGAAGGAGT+TGG + chr2_1:72324437-72324456 Msa0222890:intron 40.0%
CAACAATGATCCAAGTGAAG+GGG + chr2_1:72325245-72325264 Msa0222890:intron 40.0%
TTAACATGTTCCCCTTCACT+TGG - chr2_1:72325258-72325277 None:intergenic 40.0%
TTGGCTTCACAATGTACCTT+CGG + chr2_1:72325361-72325380 Msa0222890:CDS 40.0%
AAAGACACAATCGCAACACA+TGG + chr2_1:72325389-72325408 Msa0222890:CDS 40.0%
GGTTCCAAGCTAAAAGCTTT+CGG - chr2_1:72325528-72325547 None:intergenic 40.0%
!!! AAAGCTTTTAGCTTGGAACC+TGG + chr2_1:72325528-72325547 Msa0222890:CDS 40.0%
ACATATTCAGGACCAAGAGA+AGG + chr2_1:72325585-72325604 Msa0222890:CDS 40.0%
ATGTAATCCCTTCCTTCTCT+TGG - chr2_1:72325600-72325619 None:intergenic 40.0%
!! AAGGTTTTGGCAAGAAGGAA+AGG + chr2_1:72325631-72325650 Msa0222890:CDS 40.0%
! TCTTTTAGGCATCTGGTGAT+AGG + chr2_1:72324339-72324358 Msa0222890:CDS 40.0%
GTATGAAAATGCGAAGGAGT+TGG + chr2_1:72324437-72324456 Msa0222890:intron 40.0%
CAACAATGATCCAAGTGAAG+GGG + chr2_1:72325245-72325264 Msa0222890:intron 40.0%
TTAACATGTTCCCCTTCACT+TGG - chr2_1:72325258-72325277 None:intergenic 40.0%
TTGGCTTCACAATGTACCTT+CGG + chr2_1:72325361-72325380 Msa0222890:CDS 40.0%
AAAGACACAATCGCAACACA+TGG + chr2_1:72325389-72325408 Msa0222890:CDS 40.0%
GGTTCCAAGCTAAAAGCTTT+CGG - chr2_1:72325528-72325547 None:intergenic 40.0%
!!! AAAGCTTTTAGCTTGGAACC+TGG + chr2_1:72325528-72325547 Msa0222890:CDS 40.0%
ACATATTCAGGACCAAGAGA+AGG + chr2_1:72325585-72325604 Msa0222890:CDS 40.0%
ATGTAATCCCTTCCTTCTCT+TGG - chr2_1:72325600-72325619 None:intergenic 40.0%
!! AAGGTTTTGGCAAGAAGGAA+AGG + chr2_1:72325631-72325650 Msa0222890:CDS 40.0%
AGCACTTATCTCCAAAGGCA+GGG - chr2_1:72324298-72324317 None:intergenic 45.0%
!!! TGGTTGGTGAGAGCTCTTTT+AGG + chr2_1:72324325-72324344 Msa0222890:CDS 45.0%
! TGAGAGCTCTTTTAGGCATC+TGG + chr2_1:72324332-72324351 Msa0222890:CDS 45.0%
! GCTTTGTTGCGAAAACTCGA+TGG - chr2_1:72324533-72324552 None:intergenic 45.0%
! GAAGGAAGCACATATGCTTC+AGG - chr2_1:72324815-72324834 None:intergenic 45.0%
TGGCTTCACAATGTACCTTC+GGG + chr2_1:72325362-72325381 Msa0222890:CDS 45.0%
ATTGTGTCTTTAGCACCCGA+AGG - chr2_1:72325380-72325399 None:intergenic 45.0%
!! ACAGCCGAAAGCTTTTAGCT+TGG + chr2_1:72325521-72325540 Msa0222890:intron 45.0%
ACCAAGGACCAAGAGATGAA+AGG + chr2_1:72325558-72325577 Msa0222890:CDS 45.0%
CCAAGGACCAAGAGATGAAA+GGG + chr2_1:72325559-72325578 Msa0222890:CDS 45.0%
ATTCAGGACCAAGAGAAGGA+AGG + chr2_1:72325589-72325608 Msa0222890:CDS 45.0%
TTCAGGACCAAGAGAAGGAA+GGG + chr2_1:72325590-72325609 Msa0222890:CDS 45.0%
!! ATGGCAAGGTTTTGGCAAGA+AGG + chr2_1:72325626-72325645 Msa0222890:CDS 45.0%
AGCACTTATCTCCAAAGGCA+GGG - chr2_1:72324298-72324317 None:intergenic 45.0%
!!! TGGTTGGTGAGAGCTCTTTT+AGG + chr2_1:72324325-72324344 Msa0222890:CDS 45.0%
! TGAGAGCTCTTTTAGGCATC+TGG + chr2_1:72324332-72324351 Msa0222890:CDS 45.0%
! GCTTTGTTGCGAAAACTCGA+TGG - chr2_1:72324533-72324552 None:intergenic 45.0%
! GAAGGAAGCACATATGCTTC+AGG - chr2_1:72324815-72324834 None:intergenic 45.0%
TGGCTTCACAATGTACCTTC+GGG + chr2_1:72325362-72325381 Msa0222890:CDS 45.0%
ATTGTGTCTTTAGCACCCGA+AGG - chr2_1:72325380-72325399 None:intergenic 45.0%
!! ACAGCCGAAAGCTTTTAGCT+TGG + chr2_1:72325521-72325540 Msa0222890:intron 45.0%
ACCAAGGACCAAGAGATGAA+AGG + chr2_1:72325558-72325577 Msa0222890:CDS 45.0%
CCAAGGACCAAGAGATGAAA+GGG + chr2_1:72325559-72325578 Msa0222890:CDS 45.0%
ATTCAGGACCAAGAGAAGGA+AGG + chr2_1:72325589-72325608 Msa0222890:CDS 45.0%
TTCAGGACCAAGAGAAGGAA+GGG + chr2_1:72325590-72325609 Msa0222890:CDS 45.0%
!! ATGGCAAGGTTTTGGCAAGA+AGG + chr2_1:72325626-72325645 Msa0222890:CDS 45.0%
CAGCACTTATCTCCAAAGGC+AGG - chr2_1:72324299-72324318 None:intergenic 50.0%
! CTGCCTTTGGAGATAAGTGC+TGG + chr2_1:72324297-72324316 Msa0222890:CDS 50.0%
CCACCAGCACTTATCTCCAA+AGG - chr2_1:72324303-72324322 None:intergenic 50.0%
!! CCTTTGGAGATAAGTGCTGG+TGG + chr2_1:72324300-72324319 Msa0222890:CDS 50.0%
!! ATAAGTGCTGGTGGCTTGGT+TGG + chr2_1:72324309-72324328 Msa0222890:CDS 50.0%
GAAGGCAGCACATATGCTTC+AGG - chr2_1:72324669-72324688 None:intergenic 50.0%
AATCGCAACACATGGCGCAA+AGG + chr2_1:72325397-72325416 Msa0222890:CDS 50.0%
! ATCTCTTGGTCCTTGGTGCA+TGG - chr2_1:72325555-72325574 None:intergenic 50.0%
CCCTTTCATCTCTTGGTCCT+TGG - chr2_1:72325562-72325581 None:intergenic 50.0%
CAGCACTTATCTCCAAAGGC+AGG - chr2_1:72324299-72324318 None:intergenic 50.0%
! CTGCCTTTGGAGATAAGTGC+TGG + chr2_1:72324297-72324316 Msa0222890:CDS 50.0%
CCACCAGCACTTATCTCCAA+AGG - chr2_1:72324303-72324322 None:intergenic 50.0%
!! CCTTTGGAGATAAGTGCTGG+TGG + chr2_1:72324300-72324319 Msa0222890:CDS 50.0%
!! ATAAGTGCTGGTGGCTTGGT+TGG + chr2_1:72324309-72324328 Msa0222890:CDS 50.0%
GAAGGCAGCACATATGCTTC+AGG - chr2_1:72324669-72324688 None:intergenic 50.0%
AATCGCAACACATGGCGCAA+AGG + chr2_1:72325397-72325416 Msa0222890:CDS 50.0%
! ATCTCTTGGTCCTTGGTGCA+TGG - chr2_1:72325555-72325574 None:intergenic 50.0%
CCCTTTCATCTCTTGGTCCT+TGG - chr2_1:72325562-72325581 None:intergenic 50.0%
AGGTGAGGATTCCCTGCCTT+TGG + chr2_1:72324284-72324303 Msa0222890:CDS 55.0%
!! GGAGATAAGTGCTGGTGGCT+TGG + chr2_1:72324305-72324324 Msa0222890:CDS 55.0%
AGGTGAGGATTCCCTGCCTT+TGG + chr2_1:72324284-72324303 Msa0222890:CDS 55.0%
!! GGAGATAAGTGCTGGTGGCT+TGG + chr2_1:72324305-72324324 Msa0222890:CDS 55.0%
GGAACCTGGTCCATGCACCA+AGG + chr2_1:72325542-72325561 Msa0222890:CDS 60.0%
! TGGTCCTTGGTGCATGGACC+AGG - chr2_1:72325549-72325568 None:intergenic 60.0%
GGAACCTGGTCCATGCACCA+AGG + chr2_1:72325542-72325561 Msa0222890:CDS 60.0%
! TGGTCCTTGGTGCATGGACC+AGG - chr2_1:72325549-72325568 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72324279 72325668 72324279 ID=Msa0222890;Name=Msa0222890
chr2_1 mRNA 72324279 72325668 72324279 ID=Msa0222890-mRNA-1;Parent=Msa0222890;Name=Msa0222890-mRNA-1;_AED=0.48;_eAED=0.64;_QI=0|0|0|1|1|1|3|0|96
chr2_1 exon 72324279 72324364 72324279 ID=Msa0222890-mRNA-1:exon:20932;Parent=Msa0222890-mRNA-1
chr2_1 exon 72325358 72325418 72325358 ID=Msa0222890-mRNA-1:exon:20933;Parent=Msa0222890-mRNA-1
chr2_1 exon 72325525 72325668 72325525 ID=Msa0222890-mRNA-1:exon:20934;Parent=Msa0222890-mRNA-1
chr2_1 CDS 72324279 72324364 72324279 ID=Msa0222890-mRNA-1:cds;Parent=Msa0222890-mRNA-1
chr2_1 CDS 72325358 72325418 72325358 ID=Msa0222890-mRNA-1:cds;Parent=Msa0222890-mRNA-1
chr2_1 CDS 72325525 72325668 72325525 ID=Msa0222890-mRNA-1:cds;Parent=Msa0222890-mRNA-1
Gene Sequence

>Msa0222890

ATGAAAGGTGAGGATTCCCTGCCTTTGGAGATAAGTGCTGGTGGCTTGGTTGGTGAGAGCTCTTTTAGGCATCTGGTGATAGGTAATGTTTGGCTTCACAATGTACCTTCGGGTGCTAAAGACACAATCGCAACACATGGCGCAAAGCCGAAAGCTTTTAGCTTGGAACCTGGTCCATGCACCAAGGACCAAGAGATGAAAGGGATTACATATTCAGGACCAAGAGAAGGAAGGGATTACATATTCAGATGGCAAGGTTTTGGCAAGAAGGAAAGGAACCTACTAGTGTGA

Protein sequence

>Msa0222890

MKGEDSLPLEISAGGLVGESSFRHLVIGNVWLHNVPSGAKDTIATHGAKPKAFSLEPGPCTKDQEMKGITYSGPREGRDYIFRWQGFGKKERNLLV*