AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0321860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321860 MtrunA17_Chr2g0299151 84.444 90 14 0 3 92 509 598 7.01e-46 156
Msa0321860 MtrunA17_Chr2g0299141 62.963 81 28 1 2 80 237 317 5.77e-28 104
Msa0321860 MtrunA17_Chr2g0299101 62.963 81 28 1 2 80 522 602 8.54e-28 105
Msa0321860 MtrunA17_Chr2g0299121 62.963 81 28 1 2 80 522 602 1.13e-27 104
Msa0321860 MtrunA17_Chr2g0299091 61.728 81 29 1 2 80 496 576 3.76e-27 103
Msa0321860 MtrunA17_Chr8g0352831 43.750 96 44 3 3 92 533 624 9.72e-14 65.1
Msa0321860 MtrunA17_Chr8g0352861 41.667 96 48 2 1 92 527 618 1.61e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 20 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTATGTGATAAAAT+TGG 0.206249 2_4:+23821924 Msa0321860:CDS
CAACTTATTATCTTTATATA+AGG 0.305053 2_4:-23821967 None:intergenic
GTTGTCGCCCTTGACGTCAT+TGG 0.334456 2_4:+23822034 Msa0321860:CDS
TTAAGATTTCTTACTGTATC+CGG 0.371012 2_4:-23822134 None:intergenic
CATGGATATGGTGGAGTTGC+CGG 0.377274 2_4:+23822115 Msa0321860:CDS
GATAAAATTGGATCTTCAAA+AGG 0.378679 2_4:+23821936 Msa0321860:CDS
TTACACTTCGAGAACAACTT+TGG 0.449949 2_4:-23822062 None:intergenic
ATTGTCATTGTGCGGGTACA+TGG 0.496844 2_4:+23822097 Msa0321860:CDS
ATTGTGCGGGTACATGGATA+TGG 0.506673 2_4:+23822103 Msa0321860:CDS
ATAAAATTGGATCTTCAAAA+GGG 0.508369 2_4:+23821937 Msa0321860:CDS
TGAATTCTTACCAACATCGT+TGG 0.524130 2_4:+23822012 Msa0321860:CDS
TGCGTGTATTGTCATTGTGC+GGG 0.571866 2_4:+23822090 Msa0321860:CDS
TGGAAGCTCCAATGACGTCA+AGG 0.573288 2_4:-23822042 None:intergenic
TTGCGTGTATTGTCATTGTG+CGG 0.579717 2_4:+23822089 Msa0321860:CDS
GGAAGCTCCAATGACGTCAA+GGG 0.594615 2_4:-23822041 None:intergenic
GAATTACGTCTAATCAATTG+CGG 0.632025 2_4:+23823079 Msa0321860:CDS
AGGGCGACAACCAACGATGT+TGG 0.633917 2_4:-23822022 None:intergenic
TATATAAAGATAATAAGTTG+CGG 0.644617 2_4:+23821970 Msa0321860:CDS
TGGTAAGAATTCATAGACAG+TGG 0.688957 2_4:-23822002 None:intergenic
GTGCGGGTACATGGATATGG+TGG 0.690365 2_4:+23822106 Msa0321860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTATATTTTTCTGA+TGG - chr2_4:23821804-23821823 None:intergenic 10.0%
!!! TAATTTTTATATTTTTCTGA+TGG - chr2_4:23821804-23821823 None:intergenic 10.0%
!! CAACTTATTATCTTTATATA+AGG - chr2_4:23821970-23821989 None:intergenic 15.0%
!! TATATAAAGATAATAAGTTG+CGG + chr2_4:23821970-23821989 Msa0321860:CDS 15.0%
!!! TAAATTTAGTTTCAAAAGAT+CGG - chr2_4:23822528-23822547 None:intergenic 15.0%
!!! ATCTTTTGAAACTAAATTTA+AGG + chr2_4:23822528-23822547 Msa0321860:intron 15.0%
!!! TTAATTTTTAAGGATATGAA+TGG + chr2_4:23822875-23822894 Msa0321860:intron 15.0%
!! CAACTTATTATCTTTATATA+AGG - chr2_4:23821970-23821989 None:intergenic 15.0%
!! TATATAAAGATAATAAGTTG+CGG + chr2_4:23821970-23821989 Msa0321860:CDS 15.0%
!!! TAAATTTAGTTTCAAAAGAT+CGG - chr2_4:23822528-23822547 None:intergenic 15.0%
!!! ATCTTTTGAAACTAAATTTA+AGG + chr2_4:23822528-23822547 Msa0321860:intron 15.0%
!!! TTAATTTTTAAGGATATGAA+TGG + chr2_4:23822875-23822894 Msa0321860:intron 15.0%
!! TGGTAATAACTAATTAATGT+GGG - chr2_4:23820721-23820740 None:intergenic 20.0%
!!! TTGGTAATAACTAATTAATG+TGG - chr2_4:23820722-23820741 None:intergenic 20.0%
!! AGAATCAATTAACAAACATT+TGG + chr2_4:23820803-23820822 Msa0321860:intron 20.0%
!!! CTTTTCTCTTTTTATATAGT+GGG - chr2_4:23820834-23820853 None:intergenic 20.0%
!! AATTGTTAATTCAATCATTG+AGG + chr2_4:23820993-23821012 Msa0321860:intron 20.0%
!!! ATATTTTTGTGAAAAGTAAC+AGG - chr2_4:23821330-23821349 None:intergenic 20.0%
!!! AGGATGATTTAATTTTACTA+TGG + chr2_4:23821700-23821719 Msa0321860:intron 20.0%
!!! TGATTTAATTTTACTATGGA+CGG + chr2_4:23821704-23821723 Msa0321860:intron 20.0%
!! TCATTTGTATGTGATAAAAT+TGG + chr2_4:23821924-23821943 Msa0321860:CDS 20.0%
!! ATAAAATTGGATCTTCAAAA+GGG + chr2_4:23821937-23821956 Msa0321860:CDS 20.0%
!!! AATATTTTGTAGCTCTAAAA+TGG - chr2_4:23822462-23822481 None:intergenic 20.0%
!!! TTTTGAAACTAAATTTAAGG+TGG + chr2_4:23822531-23822550 Msa0321860:intron 20.0%
!! CTTAAAAATTAAAGTTTCCA+AGG - chr2_4:23822867-23822886 None:intergenic 20.0%
!!! CTTGGAAACTTTAATTTTTA+AGG + chr2_4:23822865-23822884 Msa0321860:intron 20.0%
!! TGGTAATAACTAATTAATGT+GGG - chr2_4:23820721-23820740 None:intergenic 20.0%
!!! TTGGTAATAACTAATTAATG+TGG - chr2_4:23820722-23820741 None:intergenic 20.0%
!! AGAATCAATTAACAAACATT+TGG + chr2_4:23820803-23820822 Msa0321860:intron 20.0%
!!! CTTTTCTCTTTTTATATAGT+GGG - chr2_4:23820834-23820853 None:intergenic 20.0%
!! AATTGTTAATTCAATCATTG+AGG + chr2_4:23820993-23821012 Msa0321860:intron 20.0%
!!! ATATTTTTGTGAAAAGTAAC+AGG - chr2_4:23821330-23821349 None:intergenic 20.0%
!!! AGGATGATTTAATTTTACTA+TGG + chr2_4:23821700-23821719 Msa0321860:intron 20.0%
!!! TGATTTAATTTTACTATGGA+CGG + chr2_4:23821704-23821723 Msa0321860:intron 20.0%
!! TCATTTGTATGTGATAAAAT+TGG + chr2_4:23821924-23821943 Msa0321860:CDS 20.0%
!! ATAAAATTGGATCTTCAAAA+GGG + chr2_4:23821937-23821956 Msa0321860:CDS 20.0%
!!! AATATTTTGTAGCTCTAAAA+TGG - chr2_4:23822462-23822481 None:intergenic 20.0%
!!! TTTTGAAACTAAATTTAAGG+TGG + chr2_4:23822531-23822550 Msa0321860:intron 20.0%
!! CTTAAAAATTAAAGTTTCCA+AGG - chr2_4:23822867-23822886 None:intergenic 20.0%
!!! CTTGGAAACTTTAATTTTTA+AGG + chr2_4:23822865-23822884 Msa0321860:intron 20.0%
! ATGATTGTTATGGTTTATCT+TGG - chr2_4:23820741-23820760 None:intergenic 25.0%
!!! ATTTTGACACATGATTGTTA+TGG - chr2_4:23820751-23820770 None:intergenic 25.0%
!! GCTTTTCTCTTTTTATATAG+TGG - chr2_4:23820835-23820854 None:intergenic 25.0%
!! TTGATTTTTGAATGCATGTT+TGG - chr2_4:23821394-23821413 None:intergenic 25.0%
! TTAAATCATCCTTGTCAAAT+AGG - chr2_4:23821692-23821711 None:intergenic 25.0%
!! TTTTATATTTTTCTGATGGC+TGG - chr2_4:23821800-23821819 None:intergenic 25.0%
! CAAAAGAGGGAAAAATATAT+CGG + chr2_4:23821884-23821903 Msa0321860:intron 25.0%
! AAAAGAGGGAAAAATATATC+GGG + chr2_4:23821885-23821904 Msa0321860:intron 25.0%
! GATAAAATTGGATCTTCAAA+AGG + chr2_4:23821936-23821955 Msa0321860:CDS 25.0%
! TTAAGATTTCTTACTGTATC+CGG - chr2_4:23822137-23822156 None:intergenic 25.0%
!!! AGTTCTTAGTTCTTTTTATG+TGG + chr2_4:23822376-23822395 Msa0321860:intron 25.0%
! TCAAATATATGGAAGGTTTA+AGG - chr2_4:23822604-23822623 None:intergenic 25.0%
! AAAATTAAAGTTTCCAAGGA+TGG - chr2_4:23822863-23822882 None:intergenic 25.0%
!!! TTTTTAAGGATATGAATGGA+TGG + chr2_4:23822879-23822898 Msa0321860:intron 25.0%
! ATGATTGTTATGGTTTATCT+TGG - chr2_4:23820741-23820760 None:intergenic 25.0%
!!! ATTTTGACACATGATTGTTA+TGG - chr2_4:23820751-23820770 None:intergenic 25.0%
!! GCTTTTCTCTTTTTATATAG+TGG - chr2_4:23820835-23820854 None:intergenic 25.0%
!! TTGATTTTTGAATGCATGTT+TGG - chr2_4:23821394-23821413 None:intergenic 25.0%
! TTAAATCATCCTTGTCAAAT+AGG - chr2_4:23821692-23821711 None:intergenic 25.0%
!! TTTTATATTTTTCTGATGGC+TGG - chr2_4:23821800-23821819 None:intergenic 25.0%
! CAAAAGAGGGAAAAATATAT+CGG + chr2_4:23821884-23821903 Msa0321860:intron 25.0%
! AAAAGAGGGAAAAATATATC+GGG + chr2_4:23821885-23821904 Msa0321860:intron 25.0%
! GATAAAATTGGATCTTCAAA+AGG + chr2_4:23821936-23821955 Msa0321860:CDS 25.0%
! TTAAGATTTCTTACTGTATC+CGG - chr2_4:23822137-23822156 None:intergenic 25.0%
!!! AGTTCTTAGTTCTTTTTATG+TGG + chr2_4:23822376-23822395 Msa0321860:intron 25.0%
! TCAAATATATGGAAGGTTTA+AGG - chr2_4:23822604-23822623 None:intergenic 25.0%
! AAAATTAAAGTTTCCAAGGA+TGG - chr2_4:23822863-23822882 None:intergenic 25.0%
!!! TTTTTAAGGATATGAATGGA+TGG + chr2_4:23822879-23822898 Msa0321860:intron 25.0%
ACAATCATGTGTCAAAATCT+AGG + chr2_4:23820753-23820772 Msa0321860:intron 30.0%
TCAATTAACAAACATTTGGC+TGG + chr2_4:23820807-23820826 Msa0321860:intron 30.0%
CCTTATCTTCTTACACTAAT+CGG + chr2_4:23820858-23820877 Msa0321860:intron 30.0%
TAATTCAATCATTGAGGTCT+TGG + chr2_4:23820999-23821018 Msa0321860:intron 30.0%
TCGAAAGTAATCCATCATTT+CGG - chr2_4:23821043-23821062 None:intergenic 30.0%
TAATGTCAAAGATGCTATGA+TGG + chr2_4:23821182-23821201 Msa0321860:intron 30.0%
! TTTTTGTGAAAAGTAACAGG+AGG - chr2_4:23821327-23821346 None:intergenic 30.0%
TGCATGTTCTTCTTCTAATT+TGG - chr2_4:23821358-23821377 None:intergenic 30.0%
AATTAGAAGAAGAACATGCA+TGG + chr2_4:23821358-23821377 Msa0321860:intron 30.0%
ATTAGAAGAAGAACATGCAT+GGG + chr2_4:23821359-23821378 Msa0321860:intron 30.0%
GATAACTTAACATCAAAGCA+GGG - chr2_4:23821608-23821627 None:intergenic 30.0%
TGATAACTTAACATCAAAGC+AGG - chr2_4:23821609-23821628 None:intergenic 30.0%
! CGATATATTTTTCCCTCTTT+TGG - chr2_4:23821886-23821905 None:intergenic 30.0%
AAAGAGGGAAAAATATATCG+GGG + chr2_4:23821886-23821905 Msa0321860:intron 30.0%
CAATGTTTGCAAGTAAAGAA+GGG - chr2_4:23822222-23822241 None:intergenic 30.0%
TCAATGTTTGCAAGTAAAGA+AGG - chr2_4:23822223-23822242 None:intergenic 30.0%
TCTTTACTTGCAAACATTGA+AGG + chr2_4:23822223-23822242 Msa0321860:intron 30.0%
TTGTCTTATCTTGACTTTAG+TGG + chr2_4:23822302-23822321 Msa0321860:intron 30.0%
! TAGTTCTTTTTATGTGGACA+AGG + chr2_4:23822382-23822401 Msa0321860:intron 30.0%
! AGTTCTTTTTATGTGGACAA+GGG + chr2_4:23822383-23822402 Msa0321860:intron 30.0%
ACAAAATATTACCAAGCCAT+TGG + chr2_4:23822472-23822491 Msa0321860:intron 30.0%
AGTTGTCTTGAAACCAAATT+GGG - chr2_4:23822664-23822683 None:intergenic 30.0%
TTTACAATTGCTCAACTCTA+GGG - chr2_4:23822705-23822724 None:intergenic 30.0%
! TTTTACAATTGCTCAACTCT+AGG - chr2_4:23822706-23822725 None:intergenic 30.0%
ATATGAATGGATGGAAAGAA+TGG + chr2_4:23822888-23822907 Msa0321860:intron 30.0%
TATGAATGGATGGAAAGAAT+GGG + chr2_4:23822889-23822908 Msa0321860:intron 30.0%
! GCACTATATAAAGCTTTTGT+AGG - chr2_4:23822946-23822965 None:intergenic 30.0%
ACTAAACATTCAAGTGACTT+TGG - chr2_4:23822995-23823014 None:intergenic 30.0%
GAATTACGTCTAATCAATTG+CGG + chr2_4:23823079-23823098 Msa0321860:CDS 30.0%
ACAATCATGTGTCAAAATCT+AGG + chr2_4:23820753-23820772 Msa0321860:intron 30.0%
TCAATTAACAAACATTTGGC+TGG + chr2_4:23820807-23820826 Msa0321860:intron 30.0%
CCTTATCTTCTTACACTAAT+CGG + chr2_4:23820858-23820877 Msa0321860:intron 30.0%
TAATTCAATCATTGAGGTCT+TGG + chr2_4:23820999-23821018 Msa0321860:intron 30.0%
TCGAAAGTAATCCATCATTT+CGG - chr2_4:23821043-23821062 None:intergenic 30.0%
TAATGTCAAAGATGCTATGA+TGG + chr2_4:23821182-23821201 Msa0321860:intron 30.0%
! TTTTTGTGAAAAGTAACAGG+AGG - chr2_4:23821327-23821346 None:intergenic 30.0%
TGCATGTTCTTCTTCTAATT+TGG - chr2_4:23821358-23821377 None:intergenic 30.0%
AATTAGAAGAAGAACATGCA+TGG + chr2_4:23821358-23821377 Msa0321860:intron 30.0%
ATTAGAAGAAGAACATGCAT+GGG + chr2_4:23821359-23821378 Msa0321860:intron 30.0%
GATAACTTAACATCAAAGCA+GGG - chr2_4:23821608-23821627 None:intergenic 30.0%
TGATAACTTAACATCAAAGC+AGG - chr2_4:23821609-23821628 None:intergenic 30.0%
! CGATATATTTTTCCCTCTTT+TGG - chr2_4:23821886-23821905 None:intergenic 30.0%
AAAGAGGGAAAAATATATCG+GGG + chr2_4:23821886-23821905 Msa0321860:intron 30.0%
CAATGTTTGCAAGTAAAGAA+GGG - chr2_4:23822222-23822241 None:intergenic 30.0%
TCAATGTTTGCAAGTAAAGA+AGG - chr2_4:23822223-23822242 None:intergenic 30.0%
TCTTTACTTGCAAACATTGA+AGG + chr2_4:23822223-23822242 Msa0321860:intron 30.0%
TTGTCTTATCTTGACTTTAG+TGG + chr2_4:23822302-23822321 Msa0321860:intron 30.0%
! TAGTTCTTTTTATGTGGACA+AGG + chr2_4:23822382-23822401 Msa0321860:intron 30.0%
! AGTTCTTTTTATGTGGACAA+GGG + chr2_4:23822383-23822402 Msa0321860:intron 30.0%
ACAAAATATTACCAAGCCAT+TGG + chr2_4:23822472-23822491 Msa0321860:intron 30.0%
AGTTGTCTTGAAACCAAATT+GGG - chr2_4:23822664-23822683 None:intergenic 30.0%
TTTACAATTGCTCAACTCTA+GGG - chr2_4:23822705-23822724 None:intergenic 30.0%
! TTTTACAATTGCTCAACTCT+AGG - chr2_4:23822706-23822725 None:intergenic 30.0%
ATATGAATGGATGGAAAGAA+TGG + chr2_4:23822888-23822907 Msa0321860:intron 30.0%
TATGAATGGATGGAAAGAAT+GGG + chr2_4:23822889-23822908 Msa0321860:intron 30.0%
! GCACTATATAAAGCTTTTGT+AGG - chr2_4:23822946-23822965 None:intergenic 30.0%
ACTAAACATTCAAGTGACTT+TGG - chr2_4:23822995-23823014 None:intergenic 30.0%
GAATTACGTCTAATCAATTG+CGG + chr2_4:23823079-23823098 Msa0321860:CDS 30.0%
ATGTACATAGAAGCTTGAGA+GGG + chr2_4:23820694-23820713 Msa0321860:intron 35.0%
TGTCAAAATCTAGGCTAAAC+AGG + chr2_4:23820762-23820781 Msa0321860:intron 35.0%
CCGATTAGTGTAAGAAGATA+AGG - chr2_4:23820861-23820880 None:intergenic 35.0%
AGCAAGTGAGTAGAAAACTA+GGG - chr2_4:23820931-23820950 None:intergenic 35.0%
AAGCAAGTGAGTAGAAAACT+AGG - chr2_4:23820932-23820951 None:intergenic 35.0%
! ATCTTGAACAACAGCATTGA+TGG - chr2_4:23821115-23821134 None:intergenic 35.0%
! AAATTTGAAGTCCAAGCTAG+AGG + chr2_4:23821239-23821258 Msa0321860:intron 35.0%
!! TGATGGATTACCTTTAGCTT+TGG + chr2_4:23821482-23821501 Msa0321860:intron 35.0%
!! CTTTAGCTTTGGAAGCAATT+GGG + chr2_4:23821493-23821512 Msa0321860:intron 35.0%
!! TTTAGCTTTGGAAGCAATTG+GGG + chr2_4:23821494-23821513 Msa0321860:intron 35.0%
TGGAATAGGATATCGAAAAG+CGG + chr2_4:23821549-23821568 Msa0321860:intron 35.0%
AGCTTCCATATGATCTTAAG+AGG + chr2_4:23821631-23821650 Msa0321860:intron 35.0%
AAGCACCTCTTAAGATCATA+TGG - chr2_4:23821639-23821658 None:intergenic 35.0%
!! TATGATCTTAAGAGGTGCTT+TGG + chr2_4:23821639-23821658 Msa0321860:intron 35.0%
!! ATGATCTTAAGAGGTGCTTT+GGG + chr2_4:23821640-23821659 Msa0321860:intron 35.0%
TACTGTGCATTATTCCCTAA+AGG + chr2_4:23821663-23821682 Msa0321860:intron 35.0%
TGTCAAATAGGTAGCCTTTA+GGG - chr2_4:23821680-23821699 None:intergenic 35.0%
TTGTCAAATAGGTAGCCTTT+AGG - chr2_4:23821681-23821700 None:intergenic 35.0%
TAAAGGCTACCTATTTGACA+AGG + chr2_4:23821680-23821699 Msa0321860:intron 35.0%
ACTTAGCTGAAACTGTGTTT+GGG + chr2_4:23821838-23821857 Msa0321860:intron 35.0%
! TGGGGATTTTTGCTTAACAT+TGG + chr2_4:23821857-23821876 Msa0321860:intron 35.0%
! GGGGATTTTTGCTTAACATT+GGG + chr2_4:23821858-23821877 Msa0321860:intron 35.0%
TGGTAAGAATTCATAGACAG+TGG - chr2_4:23822005-23822024 None:intergenic 35.0%
TGAATTCTTACCAACATCGT+TGG + chr2_4:23822012-23822031 Msa0321860:CDS 35.0%
TTACACTTCGAGAACAACTT+TGG - chr2_4:23822065-23822084 None:intergenic 35.0%
ACCAGTTTGTGTAAATTCAC+AGG - chr2_4:23822278-23822297 None:intergenic 35.0%
TCTTGACTTTAGTGGAACTA+AGG + chr2_4:23822310-23822329 Msa0321860:intron 35.0%
TACAAGAATGCCAAAGCAAA+TGG + chr2_4:23822334-23822353 Msa0321860:intron 35.0%
TGTAGTCTATCCATTTGCTT+TGG - chr2_4:23822347-23822366 None:intergenic 35.0%
TTAGGAGATCTCAATCTACA+TGG + chr2_4:23822428-23822447 Msa0321860:intron 35.0%
TACCAGTTCACAAGAAGAAA+GGG + chr2_4:23822565-23822584 Msa0321860:intron 35.0%
GAGTTGTCTTGAAACCAAAT+TGG - chr2_4:23822665-23822684 None:intergenic 35.0%
TGTCATCACTTAAGCACATT+AGG + chr2_4:23822756-23822775 Msa0321860:intron 35.0%
TTAAGCACATTAGGATCACT+GGG + chr2_4:23822765-23822784 Msa0321860:intron 35.0%
!! TGATTAGCACGGAGTTTTAT+AGG + chr2_4:23822804-23822823 Msa0321860:intron 35.0%
!! GATTAGCACGGAGTTTTATA+GGG + chr2_4:23822805-23822824 Msa0321860:intron 35.0%
AAGGATGGATATGAAACAGA+TGG - chr2_4:23822848-23822867 None:intergenic 35.0%
ATCTGTTTCATATCCATCCT+TGG + chr2_4:23822847-23822866 Msa0321860:intron 35.0%
! ATATAAAGCTTTTGTAGGCG+TGG - chr2_4:23822941-23822960 None:intergenic 35.0%
AGACGTAATTCCCTGATTAA+CGG - chr2_4:23823070-23823089 None:intergenic 35.0%
ATGTACATAGAAGCTTGAGA+GGG + chr2_4:23820694-23820713 Msa0321860:intron 35.0%
TGTCAAAATCTAGGCTAAAC+AGG + chr2_4:23820762-23820781 Msa0321860:intron 35.0%
CCGATTAGTGTAAGAAGATA+AGG - chr2_4:23820861-23820880 None:intergenic 35.0%
AGCAAGTGAGTAGAAAACTA+GGG - chr2_4:23820931-23820950 None:intergenic 35.0%
AAGCAAGTGAGTAGAAAACT+AGG - chr2_4:23820932-23820951 None:intergenic 35.0%
! ATCTTGAACAACAGCATTGA+TGG - chr2_4:23821115-23821134 None:intergenic 35.0%
! AAATTTGAAGTCCAAGCTAG+AGG + chr2_4:23821239-23821258 Msa0321860:intron 35.0%
!! TGATGGATTACCTTTAGCTT+TGG + chr2_4:23821482-23821501 Msa0321860:intron 35.0%
!! CTTTAGCTTTGGAAGCAATT+GGG + chr2_4:23821493-23821512 Msa0321860:intron 35.0%
!! TTTAGCTTTGGAAGCAATTG+GGG + chr2_4:23821494-23821513 Msa0321860:intron 35.0%
TGGAATAGGATATCGAAAAG+CGG + chr2_4:23821549-23821568 Msa0321860:intron 35.0%
AGCTTCCATATGATCTTAAG+AGG + chr2_4:23821631-23821650 Msa0321860:intron 35.0%
AAGCACCTCTTAAGATCATA+TGG - chr2_4:23821639-23821658 None:intergenic 35.0%
!! TATGATCTTAAGAGGTGCTT+TGG + chr2_4:23821639-23821658 Msa0321860:intron 35.0%
!! ATGATCTTAAGAGGTGCTTT+GGG + chr2_4:23821640-23821659 Msa0321860:intron 35.0%
TACTGTGCATTATTCCCTAA+AGG + chr2_4:23821663-23821682 Msa0321860:intron 35.0%
TGTCAAATAGGTAGCCTTTA+GGG - chr2_4:23821680-23821699 None:intergenic 35.0%
TTGTCAAATAGGTAGCCTTT+AGG - chr2_4:23821681-23821700 None:intergenic 35.0%
TAAAGGCTACCTATTTGACA+AGG + chr2_4:23821680-23821699 Msa0321860:intron 35.0%
ACTTAGCTGAAACTGTGTTT+GGG + chr2_4:23821838-23821857 Msa0321860:intron 35.0%
! TGGGGATTTTTGCTTAACAT+TGG + chr2_4:23821857-23821876 Msa0321860:intron 35.0%
! GGGGATTTTTGCTTAACATT+GGG + chr2_4:23821858-23821877 Msa0321860:intron 35.0%
TGGTAAGAATTCATAGACAG+TGG - chr2_4:23822005-23822024 None:intergenic 35.0%
TGAATTCTTACCAACATCGT+TGG + chr2_4:23822012-23822031 Msa0321860:CDS 35.0%
TTACACTTCGAGAACAACTT+TGG - chr2_4:23822065-23822084 None:intergenic 35.0%
ACCAGTTTGTGTAAATTCAC+AGG - chr2_4:23822278-23822297 None:intergenic 35.0%
TCTTGACTTTAGTGGAACTA+AGG + chr2_4:23822310-23822329 Msa0321860:intron 35.0%
TACAAGAATGCCAAAGCAAA+TGG + chr2_4:23822334-23822353 Msa0321860:intron 35.0%
TGTAGTCTATCCATTTGCTT+TGG - chr2_4:23822347-23822366 None:intergenic 35.0%
TTAGGAGATCTCAATCTACA+TGG + chr2_4:23822428-23822447 Msa0321860:intron 35.0%
TACCAGTTCACAAGAAGAAA+GGG + chr2_4:23822565-23822584 Msa0321860:intron 35.0%
GAGTTGTCTTGAAACCAAAT+TGG - chr2_4:23822665-23822684 None:intergenic 35.0%
TGTCATCACTTAAGCACATT+AGG + chr2_4:23822756-23822775 Msa0321860:intron 35.0%
TTAAGCACATTAGGATCACT+GGG + chr2_4:23822765-23822784 Msa0321860:intron 35.0%
!! TGATTAGCACGGAGTTTTAT+AGG + chr2_4:23822804-23822823 Msa0321860:intron 35.0%
!! GATTAGCACGGAGTTTTATA+GGG + chr2_4:23822805-23822824 Msa0321860:intron 35.0%
AAGGATGGATATGAAACAGA+TGG - chr2_4:23822848-23822867 None:intergenic 35.0%
ATCTGTTTCATATCCATCCT+TGG + chr2_4:23822847-23822866 Msa0321860:intron 35.0%
! ATATAAAGCTTTTGTAGGCG+TGG - chr2_4:23822941-23822960 None:intergenic 35.0%
AGACGTAATTCCCTGATTAA+CGG - chr2_4:23823070-23823089 None:intergenic 35.0%
GATGTACATAGAAGCTTGAG+AGG + chr2_4:23820693-23820712 Msa0321860:intron 40.0%
! GTTAGCTTCAACCGAAATGA+TGG + chr2_4:23821029-23821048 Msa0321860:intron 40.0%
CAGCAAATTCTCATCGAGTT+TGG - chr2_4:23821067-23821086 None:intergenic 40.0%
CAAATCCATTCCTTGACAGT+AGG - chr2_4:23821162-23821181 None:intergenic 40.0%
TACTGACACAGACAAGGTAT+CGG + chr2_4:23821287-23821306 Msa0321860:intron 40.0%
GAAAAGTAACAGGAGGAAGA+TGG - chr2_4:23821320-23821339 None:intergenic 40.0%
GAGAGTTCTCGAATAACCTT+TGG + chr2_4:23821414-23821433 Msa0321860:intron 40.0%
TTCTCGAATAACCTTTGGCT+CGG + chr2_4:23821419-23821438 Msa0321860:intron 40.0%
!! ATTTTGGAGGGAATTGCCAT+AGG + chr2_4:23821444-23821463 Msa0321860:intron 40.0%
ACATTTCCTCATGACACCTA+TGG - chr2_4:23821463-23821482 None:intergenic 40.0%
CCAATTGCTTCCAAAGCTAA+AGG - chr2_4:23821495-23821514 None:intergenic 40.0%
!! CCTTTAGCTTTGGAAGCAAT+TGG + chr2_4:23821492-23821511 Msa0321860:intron 40.0%
!! TTAGCTTTGGAAGCAATTGG+GGG + chr2_4:23821495-23821514 Msa0321860:intron 40.0%
GGATATCGAAAAGCGGTATA+TGG + chr2_4:23821556-23821575 Msa0321860:intron 40.0%
GACTTAGCTGAAACTGTGTT+TGG + chr2_4:23821837-23821856 Msa0321860:intron 40.0%
CTTAGCTGAAACTGTGTTTG+GGG + chr2_4:23821839-23821858 Msa0321860:intron 40.0%
TTAACATTGGGAGCCAAAAG+AGG + chr2_4:23821870-23821889 Msa0321860:intron 40.0%
TAACATTGGGAGCCAAAAGA+GGG + chr2_4:23821871-23821890 Msa0321860:intron 40.0%
TTGCGTGTATTGTCATTGTG+CGG + chr2_4:23822089-23822108 Msa0321860:CDS 40.0%
CAAATTTCTTATCCCAGTCC+GGG - chr2_4:23822183-23822202 None:intergenic 40.0%
GCAAATTTCTTATCCCAGTC+CGG - chr2_4:23822184-23822203 None:intergenic 40.0%
GACTGGGATAAGAAATTTGC+CGG + chr2_4:23822184-23822203 Msa0321860:intron 40.0%
! AGAAGGGAGCATAAAGAATC+CGG - chr2_4:23822206-23822225 None:intergenic 40.0%
CTTGCAAACATTGAAGGTGA+AGG + chr2_4:23822229-23822248 Msa0321860:intron 40.0%
GGTGAAGGATTGTGAGTATT+TGG + chr2_4:23822244-23822263 Msa0321860:intron 40.0%
GCCTGTGAATTTACACAAAC+TGG + chr2_4:23822274-23822293 Msa0321860:intron 40.0%
ATCTCCTAACTGTTCCACAT+TGG - chr2_4:23822417-23822436 None:intergenic 40.0%
GTACCAGTTCACAAGAAGAA+AGG + chr2_4:23822564-23822583 Msa0321860:intron 40.0%
AGCGCTGTCAAATATATGGA+AGG - chr2_4:23822611-23822630 None:intergenic 40.0%
!! TGAGAGCGCTGTCAAATATA+TGG - chr2_4:23822615-23822634 None:intergenic 40.0%
TTGGTTTCAAGACAACTCAC+TGG + chr2_4:23822667-23822686 Msa0321860:intron 40.0%
AGACAACTCACTGGTAAGTT+TGG + chr2_4:23822676-23822695 Msa0321860:intron 40.0%
CTTAAGCACATTAGGATCAC+TGG + chr2_4:23822764-23822783 Msa0321860:intron 40.0%
ATGGGAATCTGAAGATGTTG+TGG + chr2_4:23822907-23822926 Msa0321860:intron 40.0%
TGGGAATCTGAAGATGTTGT+GGG + chr2_4:23822908-23822927 Msa0321860:intron 40.0%
TTCCATCTTCTCCGTTAATC+AGG + chr2_4:23823056-23823075 Msa0321860:intron 40.0%
TCCATCTTCTCCGTTAATCA+GGG + chr2_4:23823057-23823076 Msa0321860:intron 40.0%
GATGTACATAGAAGCTTGAG+AGG + chr2_4:23820693-23820712 Msa0321860:intron 40.0%
! GTTAGCTTCAACCGAAATGA+TGG + chr2_4:23821029-23821048 Msa0321860:intron 40.0%
CAGCAAATTCTCATCGAGTT+TGG - chr2_4:23821067-23821086 None:intergenic 40.0%
CAAATCCATTCCTTGACAGT+AGG - chr2_4:23821162-23821181 None:intergenic 40.0%
TACTGACACAGACAAGGTAT+CGG + chr2_4:23821287-23821306 Msa0321860:intron 40.0%
GAAAAGTAACAGGAGGAAGA+TGG - chr2_4:23821320-23821339 None:intergenic 40.0%
GAGAGTTCTCGAATAACCTT+TGG + chr2_4:23821414-23821433 Msa0321860:intron 40.0%
TTCTCGAATAACCTTTGGCT+CGG + chr2_4:23821419-23821438 Msa0321860:intron 40.0%
!! ATTTTGGAGGGAATTGCCAT+AGG + chr2_4:23821444-23821463 Msa0321860:intron 40.0%
ACATTTCCTCATGACACCTA+TGG - chr2_4:23821463-23821482 None:intergenic 40.0%
CCAATTGCTTCCAAAGCTAA+AGG - chr2_4:23821495-23821514 None:intergenic 40.0%
!! CCTTTAGCTTTGGAAGCAAT+TGG + chr2_4:23821492-23821511 Msa0321860:intron 40.0%
!! TTAGCTTTGGAAGCAATTGG+GGG + chr2_4:23821495-23821514 Msa0321860:intron 40.0%
GGATATCGAAAAGCGGTATA+TGG + chr2_4:23821556-23821575 Msa0321860:intron 40.0%
GACTTAGCTGAAACTGTGTT+TGG + chr2_4:23821837-23821856 Msa0321860:intron 40.0%
CTTAGCTGAAACTGTGTTTG+GGG + chr2_4:23821839-23821858 Msa0321860:intron 40.0%
TTAACATTGGGAGCCAAAAG+AGG + chr2_4:23821870-23821889 Msa0321860:intron 40.0%
TAACATTGGGAGCCAAAAGA+GGG + chr2_4:23821871-23821890 Msa0321860:intron 40.0%
TTGCGTGTATTGTCATTGTG+CGG + chr2_4:23822089-23822108 Msa0321860:CDS 40.0%
CAAATTTCTTATCCCAGTCC+GGG - chr2_4:23822183-23822202 None:intergenic 40.0%
GCAAATTTCTTATCCCAGTC+CGG - chr2_4:23822184-23822203 None:intergenic 40.0%
GACTGGGATAAGAAATTTGC+CGG + chr2_4:23822184-23822203 Msa0321860:intron 40.0%
! AGAAGGGAGCATAAAGAATC+CGG - chr2_4:23822206-23822225 None:intergenic 40.0%
CTTGCAAACATTGAAGGTGA+AGG + chr2_4:23822229-23822248 Msa0321860:intron 40.0%
GGTGAAGGATTGTGAGTATT+TGG + chr2_4:23822244-23822263 Msa0321860:intron 40.0%
GCCTGTGAATTTACACAAAC+TGG + chr2_4:23822274-23822293 Msa0321860:intron 40.0%
ATCTCCTAACTGTTCCACAT+TGG - chr2_4:23822417-23822436 None:intergenic 40.0%
GTACCAGTTCACAAGAAGAA+AGG + chr2_4:23822564-23822583 Msa0321860:intron 40.0%
AGCGCTGTCAAATATATGGA+AGG - chr2_4:23822611-23822630 None:intergenic 40.0%
!! TGAGAGCGCTGTCAAATATA+TGG - chr2_4:23822615-23822634 None:intergenic 40.0%
TTGGTTTCAAGACAACTCAC+TGG + chr2_4:23822667-23822686 Msa0321860:intron 40.0%
AGACAACTCACTGGTAAGTT+TGG + chr2_4:23822676-23822695 Msa0321860:intron 40.0%
CTTAAGCACATTAGGATCAC+TGG + chr2_4:23822764-23822783 Msa0321860:intron 40.0%
ATGGGAATCTGAAGATGTTG+TGG + chr2_4:23822907-23822926 Msa0321860:intron 40.0%
TGGGAATCTGAAGATGTTGT+GGG + chr2_4:23822908-23822927 Msa0321860:intron 40.0%
TTCCATCTTCTCCGTTAATC+AGG + chr2_4:23823056-23823075 Msa0321860:intron 40.0%
TCCATCTTCTCCGTTAATCA+GGG + chr2_4:23823057-23823076 Msa0321860:intron 40.0%
!! ATGGCTGCTGAATTTGTTGG+CGG + chr2_4:23820967-23820986 Msa0321860:intron 45.0%
!! AGATGCTATGATGGATGCTG+AGG + chr2_4:23821191-23821210 Msa0321860:intron 45.0%
TTCAGATGCTTCCTCTAGCT+TGG - chr2_4:23821253-23821272 None:intergenic 45.0%
! TCTCGAATAACCTTTGGCTC+GGG + chr2_4:23821420-23821439 Msa0321860:intron 45.0%
!!! AACCTTTGGCTCGGGAATTT+TGG + chr2_4:23821428-23821447 Msa0321860:intron 45.0%
!!! TTTGGCTCGGGAATTTTGGA+GGG + chr2_4:23821432-23821451 Msa0321860:intron 45.0%
! GAATTGCCATAGGTGTCATG+AGG + chr2_4:23821454-23821473 Msa0321860:intron 45.0%
! GGTGTCATGAGGAAATGTGA+TGG + chr2_4:23821465-23821484 Msa0321860:intron 45.0%
TACATTCATCCTTGCAGGAC+TGG + chr2_4:23821529-23821548 Msa0321860:intron 45.0%
TATCCTATTCCAGTCCTGCA+AGG - chr2_4:23821541-23821560 None:intergenic 45.0%
AGCGGTATATGGAACTTACC+AGG + chr2_4:23821567-23821586 Msa0321860:intron 45.0%
! GGGACAATTTCTGTTTCTCC+TGG - chr2_4:23821588-23821607 None:intergenic 45.0%
TTTCTCCCTAGACGAGAGAA+TGG + chr2_4:23821735-23821754 Msa0321860:intron 45.0%
ACTCACCATTCTCTCGTCTA+GGG - chr2_4:23821743-23821762 None:intergenic 45.0%
GAGGGAAAAATATATCGGGG+AGG + chr2_4:23821889-23821908 Msa0321860:intron 45.0%
TGCGTGTATTGTCATTGTGC+GGG + chr2_4:23822090-23822109 Msa0321860:CDS 45.0%
ATTGTCATTGTGCGGGTACA+TGG + chr2_4:23822097-23822116 Msa0321860:CDS 45.0%
ATTGTGCGGGTACATGGATA+TGG + chr2_4:23822103-23822122 Msa0321860:CDS 45.0%
GAGTCCAATGTGGAACAGTT+AGG + chr2_4:23822410-23822429 Msa0321860:intron 45.0%
TTTGCAAGAGCTGCATCCAA+TGG - chr2_4:23822491-23822510 None:intergenic 45.0%
CTCCCTTTCTTCTTGTGAAC+TGG - chr2_4:23822570-23822589 None:intergenic 45.0%
CAGTTCACAAGAAGAAAGGG+AGG + chr2_4:23822568-23822587 Msa0321860:intron 45.0%
GCGCTCTCAATCGAAAAGTA+CGG + chr2_4:23822626-23822645 Msa0321860:intron 45.0%
! CTCTCAATCGAAAAGTACGG+TGG + chr2_4:23822629-23822648 Msa0321860:intron 45.0%
GTGGTACATCGTTCCCAATT+TGG + chr2_4:23822648-23822667 Msa0321860:intron 45.0%
! TGTCTTTTGCTTCCTTCGCT+TGG + chr2_4:23822728-23822747 Msa0321860:intron 45.0%
GATGACATAGTTCCAAGCGA+AGG - chr2_4:23822743-23822762 None:intergenic 45.0%
! GGCATTTTGCCTTTCAGACT+TGG - chr2_4:23822974-23822993 None:intergenic 45.0%
TCCCTGATTAACGGAGAAGA+TGG - chr2_4:23823061-23823080 None:intergenic 45.0%
!! ATGGCTGCTGAATTTGTTGG+CGG + chr2_4:23820967-23820986 Msa0321860:intron 45.0%
!! AGATGCTATGATGGATGCTG+AGG + chr2_4:23821191-23821210 Msa0321860:intron 45.0%
TTCAGATGCTTCCTCTAGCT+TGG - chr2_4:23821253-23821272 None:intergenic 45.0%
! TCTCGAATAACCTTTGGCTC+GGG + chr2_4:23821420-23821439 Msa0321860:intron 45.0%
!!! AACCTTTGGCTCGGGAATTT+TGG + chr2_4:23821428-23821447 Msa0321860:intron 45.0%
!!! TTTGGCTCGGGAATTTTGGA+GGG + chr2_4:23821432-23821451 Msa0321860:intron 45.0%
! GAATTGCCATAGGTGTCATG+AGG + chr2_4:23821454-23821473 Msa0321860:intron 45.0%
! GGTGTCATGAGGAAATGTGA+TGG + chr2_4:23821465-23821484 Msa0321860:intron 45.0%
TACATTCATCCTTGCAGGAC+TGG + chr2_4:23821529-23821548 Msa0321860:intron 45.0%
TATCCTATTCCAGTCCTGCA+AGG - chr2_4:23821541-23821560 None:intergenic 45.0%
AGCGGTATATGGAACTTACC+AGG + chr2_4:23821567-23821586 Msa0321860:intron 45.0%
! GGGACAATTTCTGTTTCTCC+TGG - chr2_4:23821588-23821607 None:intergenic 45.0%
TTTCTCCCTAGACGAGAGAA+TGG + chr2_4:23821735-23821754 Msa0321860:intron 45.0%
ACTCACCATTCTCTCGTCTA+GGG - chr2_4:23821743-23821762 None:intergenic 45.0%
GAGGGAAAAATATATCGGGG+AGG + chr2_4:23821889-23821908 Msa0321860:intron 45.0%
TGCGTGTATTGTCATTGTGC+GGG + chr2_4:23822090-23822109 Msa0321860:CDS 45.0%
ATTGTCATTGTGCGGGTACA+TGG + chr2_4:23822097-23822116 Msa0321860:CDS 45.0%
ATTGTGCGGGTACATGGATA+TGG + chr2_4:23822103-23822122 Msa0321860:CDS 45.0%
GAGTCCAATGTGGAACAGTT+AGG + chr2_4:23822410-23822429 Msa0321860:intron 45.0%
TTTGCAAGAGCTGCATCCAA+TGG - chr2_4:23822491-23822510 None:intergenic 45.0%
CTCCCTTTCTTCTTGTGAAC+TGG - chr2_4:23822570-23822589 None:intergenic 45.0%
CAGTTCACAAGAAGAAAGGG+AGG + chr2_4:23822568-23822587 Msa0321860:intron 45.0%
GCGCTCTCAATCGAAAAGTA+CGG + chr2_4:23822626-23822645 Msa0321860:intron 45.0%
! CTCTCAATCGAAAAGTACGG+TGG + chr2_4:23822629-23822648 Msa0321860:intron 45.0%
GTGGTACATCGTTCCCAATT+TGG + chr2_4:23822648-23822667 Msa0321860:intron 45.0%
! TGTCTTTTGCTTCCTTCGCT+TGG + chr2_4:23822728-23822747 Msa0321860:intron 45.0%
GATGACATAGTTCCAAGCGA+AGG - chr2_4:23822743-23822762 None:intergenic 45.0%
! GGCATTTTGCCTTTCAGACT+TGG - chr2_4:23822974-23822993 None:intergenic 45.0%
TCCCTGATTAACGGAGAAGA+TGG - chr2_4:23823061-23823080 None:intergenic 45.0%
! GCTTGCTCCTTTTTCTGCCA+TGG + chr2_4:23820948-23820967 Msa0321860:intron 50.0%
TCAGCAGCCATGGCAGAAAA+AGG - chr2_4:23820958-23820977 None:intergenic 50.0%
GCCATGGCTGCTGAATTTGT+TGG + chr2_4:23820964-23820983 Msa0321860:intron 50.0%
GCCAACAAATTCAGCAGCCA+TGG - chr2_4:23820968-23820987 None:intergenic 50.0%
GATCAGAAGGCCTACTGTCA+AGG + chr2_4:23821149-23821168 Msa0321860:intron 50.0%
GAAGGCCTACTGTCAAGGAA+TGG + chr2_4:23821154-23821173 Msa0321860:intron 50.0%
GTGTCAGTAGAGCTGATCTG+AGG - chr2_4:23821276-23821295 None:intergenic 50.0%
CAGCTCTACTGACACAGACA+AGG + chr2_4:23821281-23821300 Msa0321860:intron 50.0%
CTCCAAAATTCCCGAGCCAA+AGG - chr2_4:23821433-23821452 None:intergenic 50.0%
!!! CTTTGGCTCGGGAATTTTGG+AGG + chr2_4:23821431-23821450 Msa0321860:intron 50.0%
GAGCGTACATTCATCCTTGC+AGG + chr2_4:23821524-23821543 Msa0321860:intron 50.0%
CATCCTTGCAGGACTGGAAT+AGG + chr2_4:23821535-23821554 Msa0321860:intron 50.0%
CACTCACCATTCTCTCGTCT+AGG - chr2_4:23821744-23821763 None:intergenic 50.0%
CTAGACGAGAGAATGGTGAG+TGG + chr2_4:23821742-23821761 Msa0321860:intron 50.0%
GGAAGCTCCAATGACGTCAA+GGG - chr2_4:23822044-23822063 None:intergenic 50.0%
TGGAAGCTCCAATGACGTCA+AGG - chr2_4:23822045-23822064 None:intergenic 50.0%
! CATGGATATGGTGGAGTTGC+CGG + chr2_4:23822115-23822134 Msa0321860:CDS 50.0%
TTCTTATCCCAGTCCGGGAA+AGG - chr2_4:23822178-23822197 None:intergenic 50.0%
AAGAGCTGCATCCAATGGCT+TGG - chr2_4:23822486-23822505 None:intergenic 50.0%
ATTAGGATCACTGGGCTCTC+TGG + chr2_4:23822773-23822792 Msa0321860:intron 50.0%
TTAGGATCACTGGGCTCTCT+GGG + chr2_4:23822774-23822793 Msa0321860:intron 50.0%
TGGGATAGGGGTGATTAGCA+CGG + chr2_4:23822793-23822812 Msa0321860:intron 50.0%
GTGCGATGTCCAAGTCTGAA+AGG + chr2_4:23822962-23822981 Msa0321860:intron 50.0%
! GCTTGCTCCTTTTTCTGCCA+TGG + chr2_4:23820948-23820967 Msa0321860:intron 50.0%
TCAGCAGCCATGGCAGAAAA+AGG - chr2_4:23820958-23820977 None:intergenic 50.0%
GCCATGGCTGCTGAATTTGT+TGG + chr2_4:23820964-23820983 Msa0321860:intron 50.0%
GCCAACAAATTCAGCAGCCA+TGG - chr2_4:23820968-23820987 None:intergenic 50.0%
GATCAGAAGGCCTACTGTCA+AGG + chr2_4:23821149-23821168 Msa0321860:intron 50.0%
GAAGGCCTACTGTCAAGGAA+TGG + chr2_4:23821154-23821173 Msa0321860:intron 50.0%
GTGTCAGTAGAGCTGATCTG+AGG - chr2_4:23821276-23821295 None:intergenic 50.0%
CAGCTCTACTGACACAGACA+AGG + chr2_4:23821281-23821300 Msa0321860:intron 50.0%
CTCCAAAATTCCCGAGCCAA+AGG - chr2_4:23821433-23821452 None:intergenic 50.0%
!!! CTTTGGCTCGGGAATTTTGG+AGG + chr2_4:23821431-23821450 Msa0321860:intron 50.0%
GAGCGTACATTCATCCTTGC+AGG + chr2_4:23821524-23821543 Msa0321860:intron 50.0%
CATCCTTGCAGGACTGGAAT+AGG + chr2_4:23821535-23821554 Msa0321860:intron 50.0%
CACTCACCATTCTCTCGTCT+AGG - chr2_4:23821744-23821763 None:intergenic 50.0%
CTAGACGAGAGAATGGTGAG+TGG + chr2_4:23821742-23821761 Msa0321860:intron 50.0%
GGAAGCTCCAATGACGTCAA+GGG - chr2_4:23822044-23822063 None:intergenic 50.0%
TGGAAGCTCCAATGACGTCA+AGG - chr2_4:23822045-23822064 None:intergenic 50.0%
! CATGGATATGGTGGAGTTGC+CGG + chr2_4:23822115-23822134 Msa0321860:CDS 50.0%
TTCTTATCCCAGTCCGGGAA+AGG - chr2_4:23822178-23822197 None:intergenic 50.0%
AAGAGCTGCATCCAATGGCT+TGG - chr2_4:23822486-23822505 None:intergenic 50.0%
ATTAGGATCACTGGGCTCTC+TGG + chr2_4:23822773-23822792 Msa0321860:intron 50.0%
TTAGGATCACTGGGCTCTCT+GGG + chr2_4:23822774-23822793 Msa0321860:intron 50.0%
TGGGATAGGGGTGATTAGCA+CGG + chr2_4:23822793-23822812 Msa0321860:intron 50.0%
GTGCGATGTCCAAGTCTGAA+AGG + chr2_4:23822962-23822981 Msa0321860:intron 50.0%
CTGAGCAGCAGCAGATCAGA+AGG + chr2_4:23821136-23821155 Msa0321860:intron 55.0%
AGGGCGACAACCAACGATGT+TGG - chr2_4:23822025-23822044 None:intergenic 55.0%
GTTGTCGCCCTTGACGTCAT+TGG + chr2_4:23822034-23822053 Msa0321860:CDS 55.0%
GTGCGGGTACATGGATATGG+TGG + chr2_4:23822106-23822125 Msa0321860:CDS 55.0%
TCCGTCATCTCGACCTTTCC+CGG + chr2_4:23822162-23822181 Msa0321860:intron 55.0%
TCCGGGAAAGGTCGAGATGA+CGG - chr2_4:23822166-23822185 None:intergenic 55.0%
ATCTCGACCTTTCCCGGACT+GGG + chr2_4:23822168-23822187 Msa0321860:intron 55.0%
CAAGGGCAGTGAGTCCAATG+TGG + chr2_4:23822400-23822419 Msa0321860:intron 55.0%
!! ATCACTGGGCTCTCTGGGAT+AGG + chr2_4:23822779-23822798 Msa0321860:intron 55.0%
!! TCACTGGGCTCTCTGGGATA+GGG + chr2_4:23822780-23822799 Msa0321860:intron 55.0%
CTGAGCAGCAGCAGATCAGA+AGG + chr2_4:23821136-23821155 Msa0321860:intron 55.0%
AGGGCGACAACCAACGATGT+TGG - chr2_4:23822025-23822044 None:intergenic 55.0%
GTTGTCGCCCTTGACGTCAT+TGG + chr2_4:23822034-23822053 Msa0321860:CDS 55.0%
GTGCGGGTACATGGATATGG+TGG + chr2_4:23822106-23822125 Msa0321860:CDS 55.0%
TCCGTCATCTCGACCTTTCC+CGG + chr2_4:23822162-23822181 Msa0321860:intron 55.0%
TCCGGGAAAGGTCGAGATGA+CGG - chr2_4:23822166-23822185 None:intergenic 55.0%
ATCTCGACCTTTCCCGGACT+GGG + chr2_4:23822168-23822187 Msa0321860:intron 55.0%
CAAGGGCAGTGAGTCCAATG+TGG + chr2_4:23822400-23822419 Msa0321860:intron 55.0%
!! ATCACTGGGCTCTCTGGGAT+AGG + chr2_4:23822779-23822798 Msa0321860:intron 55.0%
!! TCACTGGGCTCTCTGGGATA+GGG + chr2_4:23822780-23822799 Msa0321860:intron 55.0%
CATCTCGACCTTTCCCGGAC+TGG + chr2_4:23822167-23822186 Msa0321860:intron 60.0%
!! CACTGGGCTCTCTGGGATAG+GGG + chr2_4:23822781-23822800 Msa0321860:intron 60.0%
CATCTCGACCTTTCCCGGAC+TGG + chr2_4:23822167-23822186 Msa0321860:intron 60.0%
!! CACTGGGCTCTCTGGGATAG+GGG + chr2_4:23822781-23822800 Msa0321860:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 23820688 23823116 23820688 ID=Msa0321860;Name=Msa0321860
chr2_4 mRNA 23820688 23823116 23820688 ID=Msa0321860-mRNA-1;Parent=Msa0321860;Name=Msa0321860-mRNA-1;_AED=0.48;_eAED=0.57;_QI=0|0|0|1|0|0|3|0|92
chr2_4 exon 23820688 23820695 23820688 ID=Msa0321860-mRNA-1:exon:8621;Parent=Msa0321860-mRNA-1
chr2_4 exon 23821911 23822142 23821911 ID=Msa0321860-mRNA-1:exon:8622;Parent=Msa0321860-mRNA-1
chr2_4 exon 23823078 23823116 23823078 ID=Msa0321860-mRNA-1:exon:8623;Parent=Msa0321860-mRNA-1
chr2_4 CDS 23820688 23820695 23820688 ID=Msa0321860-mRNA-1:cds;Parent=Msa0321860-mRNA-1
chr2_4 CDS 23821911 23822142 23821911 ID=Msa0321860-mRNA-1:cds;Parent=Msa0321860-mRNA-1
chr2_4 CDS 23823078 23823116 23823078 ID=Msa0321860-mRNA-1:cds;Parent=Msa0321860-mRNA-1
Gene Sequence

>Msa0321860

ATGACGATGACTCGTCATTTTTCATTTGTATGTGATAAAATTGGATCTTCAAAAGGGTTCGAGACCTTATATAAAGATAATAAGTTGCGGACATTTATACCACTGTCTATGAATTCTTACCAACATCGTTGGTTGTCGCCCTTGACGTCATTGGAGCTTCCAAAGTTGTTCTCGAAGTGTAAGTTGTTGCGTGTATTGTCATTGTGCGGGTACATGGATATGGTGGAGTTGCCGGATACAGGAATTACGTCTAATCAATTGCGGAAAATTGAAATTTAA

Protein sequence

>Msa0321860

MTMTRHFSFVCDKIGSSKGFETLYKDNKLRTFIPLSMNSYQHRWLSPLTSLELPKLFSKCKLLRVLSLCGYMDMVELPDTGITSNQLRKIEI*