AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0459390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459390 MtrunA17_Chr3g0107541 79.925 533 107 0 1 533 1 533 0.0 874
Msa0459390 MtrunA17_Chr3g0107611 66.914 538 172 3 1 532 1 538 0.0 765
Msa0459390 MtrunA17_Chr8g0370651 58.925 521 211 1 16 533 10 530 0.0 656
Msa0459390 MtrunA17_Chr8g0370641 58.925 521 207 3 16 533 10 526 0.0 645
Msa0459390 MtrunA17_Chr3g0107561 87.975 316 38 0 6 321 1 316 0.0 584
Msa0459390 MtrunA17_Chr3g0105751 74.143 321 81 2 6 324 1 321 1.18e-179 510
Msa0459390 MtrunA17_Chr3g0107551 94.258 209 12 0 325 533 4 212 6.59e-143 410
Msa0459390 MtrunA17_Chr3g0105761 72.381 210 56 1 327 536 1 208 1.83e-103 309
Msa0459390 MtrunA17_Chr7g0254641 32.347 507 320 8 40 532 24 521 6.75e-89 283
Msa0459390 MtrunA17_Chr8g0344151 32.383 491 317 10 47 533 33 512 3.48e-77 252
Msa0459390 MtrunA17_Chr3g0086651 32.231 484 312 9 59 535 41 515 1.70e-72 239
Msa0459390 MtrunA17_Chr3g0086661 32.645 484 310 9 59 535 41 515 1.81e-72 239
Msa0459390 MtrunA17_Chr8g0344191 31.530 536 342 14 4 531 26 544 2.10e-72 240
Msa0459390 MtrunA17_Chr8g0344181 31.984 494 315 11 47 533 35 514 1.42e-71 237
Msa0459390 MtrunA17_Chr3g0107581 69.333 150 40 2 80 226 1 147 2.87e-71 224
Msa0459390 MtrunA17_Chr2g0310381 29.895 475 311 9 42 511 21 478 1.10e-70 234
Msa0459390 MtrunA17_Chr2g0310391 29.515 454 300 8 42 492 21 457 9.66e-70 232
Msa0459390 MtrunA17_Chr8g0382901 30.752 452 287 8 48 494 490 920 2.42e-68 237
Msa0459390 MtrunA17_Chr8g0382901 30.357 448 279 7 48 494 26 441 5.25e-66 230
Msa0459390 MtrunA17_Chr3g0094171 28.824 510 347 8 24 531 18 513 8.84e-68 227
Msa0459390 MtrunA17_Chr3g0086691 30.228 483 323 8 59 535 41 515 1.03e-67 227
Msa0459390 MtrunA17_Chr4g0061381 30.533 488 306 12 59 531 40 509 9.10e-67 224
Msa0459390 MtrunA17_Chr6g0484811 30.753 465 298 9 48 505 35 482 7.49e-66 222
Msa0459390 MtrunA17_Chr7g0255531 27.519 516 344 10 24 532 11 503 6.79e-65 219
Msa0459390 MtrunA17_Chr8g0372341 55.000 200 87 1 16 212 10 209 5.13e-64 207
Msa0459390 MtrunA17_Chr5g0403351 29.436 479 315 7 23 494 7 469 5.43e-64 217
Msa0459390 MtrunA17_Chr8g0390881 28.517 526 340 12 19 529 4 508 3.57e-63 215
Msa0459390 MtrunA17_Chr1g0200961 28.317 505 341 8 25 524 6 494 8.95e-63 213
Msa0459390 MtrunA17_Chr8g0372591 63.889 144 51 1 324 466 1 144 2.41e-62 201
Msa0459390 MtrunA17_Chr3g0116681 29.287 519 334 15 16 524 7 502 5.33e-62 212
Msa0459390 MtrunA17_Chr6g0484841 27.897 466 309 7 37 494 24 470 9.16e-62 211
Msa0459390 MtrunA17_Chr4g0057001 28.687 495 328 10 39 527 40 515 1.48e-61 211
Msa0459390 MtrunA17_Chr3g0116741 28.656 506 326 12 3 499 7 486 2.59e-61 210
Msa0459390 MtrunA17_Chr4g0053621 27.479 484 316 8 25 494 1 463 3.05e-61 209
Msa0459390 MtrunA17_Chr3g0094231 26.955 486 339 8 48 531 34 505 8.50e-61 208
Msa0459390 MtrunA17_Chr8g0339311 29.222 527 355 10 19 531 5 527 1.08e-60 209
Msa0459390 MtrunA17_Chr8g0361471 29.079 478 314 9 24 494 8 467 2.12e-60 207
Msa0459390 MtrunA17_Chr2g0304871 29.774 487 325 10 49 526 36 514 3.08e-60 207
Msa0459390 MtrunA17_Chr5g0430131 29.065 492 316 9 24 505 12 480 4.39e-60 206
Msa0459390 MtrunA17_Chr6g0466331 28.870 478 315 9 24 494 8 467 4.47e-60 206
Msa0459390 MtrunA17_Chr3g0101731 28.163 490 319 12 13 494 3 467 9.05e-60 206
Msa0459390 MtrunA17_Chr5g0430101 29.218 486 322 9 24 505 11 478 1.00e-59 206
Msa0459390 MtrunA17_Chr6g0465511 28.452 478 317 7 24 494 8 467 1.97e-59 205
Msa0459390 MtrunA17_Chr8g0372251 28.810 479 308 11 51 517 36 493 2.78e-59 204
Msa0459390 MtrunA17_Chr5g0430031 27.011 522 340 12 24 529 12 508 4.12e-59 204
Msa0459390 MtrunA17_Chr5g0395331 28.719 484 324 6 11 494 8 470 6.54e-59 203
Msa0459390 MtrunA17_Chr3g0101671 28.921 491 318 11 15 494 1 471 1.31e-58 202
Msa0459390 MtrunA17_Chr7g0235551 29.253 482 314 12 23 494 10 474 5.02e-58 201
Msa0459390 MtrunA17_Chr1g0176831 28.211 475 327 5 20 494 33 493 5.34e-58 201
Msa0459390 MtrunA17_Chr8g0356001 27.327 505 347 8 24 521 11 502 2.31e-57 199
Msa0459390 MtrunA17_Chr7g0246221 27.883 477 325 6 23 494 7 469 3.28e-57 199
Msa0459390 MtrunA17_Chr4g0056951 28.602 465 318 8 66 527 57 510 6.42e-57 198
Msa0459390 MtrunA17_Chr1g0174441 28.719 484 316 10 23 494 29 495 9.30e-57 198
Msa0459390 MtrunA17_Chr4g0039901 28.033 478 327 10 49 523 34 497 1.20e-56 197
Msa0459390 MtrunA17_Chr5g0403331 29.075 454 297 10 49 494 34 470 1.78e-56 197
Msa0459390 MtrunA17_Chr5g0430091 27.846 492 323 10 24 505 12 481 4.69e-56 196
Msa0459390 MtrunA17_Chr3g0101611 30.087 462 286 12 45 494 33 469 5.36e-56 196
Msa0459390 MtrunA17_Chr4g0058281 27.254 477 328 8 22 494 18 479 5.40e-56 196
Msa0459390 MtrunA17_Chr5g0405001 28.008 507 322 12 22 517 27 501 5.51e-56 196
Msa0459390 MtrunA17_Chr5g0431641 28.512 484 318 12 15 494 7 466 1.20e-55 194
Msa0459390 MtrunA17_Chr4g0047641 27.755 490 324 10 13 494 15 482 1.36e-55 195
Msa0459390 MtrunA17_Chr5g0395321 27.731 476 321 5 19 494 11 463 1.36e-55 195
Msa0459390 MtrunA17_Chr2g0314721 27.579 475 330 5 20 494 14 474 2.24e-55 194
Msa0459390 MtrunA17_Chr3g0101701 29.011 455 292 11 50 494 38 471 3.11e-55 193
Msa0459390 MtrunA17_Chr1g0174461 28.056 499 331 10 23 516 10 485 3.78e-55 193
Msa0459390 MtrunA17_Chr3g0101631 29.158 487 300 12 19 494 10 462 3.83e-55 193
Msa0459390 MtrunA17_Chr3g0101711 28.728 456 292 9 50 494 37 470 4.15e-55 193
Msa0459390 MtrunA17_Chr5g0401681 27.108 498 330 11 20 511 5 475 7.03e-55 192
Msa0459390 MtrunA17_Chr5g0430081 29.006 493 316 11 24 505 10 479 7.38e-55 192
Msa0459390 MtrunA17_Chr4g0035921 27.326 516 332 15 23 520 14 504 7.64e-55 192
Msa0459390 MtrunA17_Chr6g0472311 27.112 509 342 10 13 507 2 495 1.18e-54 192
Msa0459390 MtrunA17_Chr3g0101661 27.801 482 316 9 23 494 11 470 1.21e-54 192
Msa0459390 MtrunA17_Chr1g0162811 29.314 481 314 11 20 494 6 466 2.46e-54 191
Msa0459390 MtrunA17_Chr6g0451751 26.600 500 343 9 48 532 39 529 2.52e-54 191
Msa0459390 MtrunA17_Chr4g0046631 28.032 503 335 13 41 531 36 523 2.79e-54 191
Msa0459390 MtrunA17_Chr3g0101601 28.425 489 303 12 20 494 8 463 5.38e-54 190
Msa0459390 MtrunA17_Chr4g0052881 28.077 520 335 13 13 525 4 491 6.47e-54 190
Msa0459390 MtrunA17_Chr5g0445441 27.044 477 322 10 23 494 52 507 9.23e-54 190
Msa0459390 MtrunA17_Chr8g0355961 27.530 494 339 6 24 511 11 491 1.27e-53 189
Msa0459390 MtrunA17_Chr8g0362481 26.757 441 308 8 92 526 5 436 2.11e-53 187
Msa0459390 MtrunA17_Chr7g0265611 27.992 493 327 12 47 528 43 518 2.39e-53 189
Msa0459390 MtrunA17_Chr5g0431501 26.434 488 331 12 50 526 33 503 2.55e-53 188
Msa0459390 MtrunA17_Chr5g0431461 26.434 488 331 12 50 526 33 503 2.55e-53 188
Msa0459390 MtrunA17_Chr5g0395381 27.731 476 296 7 19 494 11 438 2.87e-53 187
Msa0459390 MtrunA17_Chr5g0431671 28.348 448 300 7 50 494 38 467 4.77e-53 187
Msa0459390 MtrunA17_Chr4g0047691 27.038 503 340 11 15 511 19 500 9.17e-53 187
Msa0459390 MtrunA17_Chr4g0058231 25.498 502 335 12 23 511 8 483 1.21e-52 186
Msa0459390 MtrunA17_Chr2g0314731 27.292 469 316 6 50 518 33 476 1.37e-52 186
Msa0459390 MtrunA17_Chr1g0198191 27.869 488 323 14 50 525 45 515 1.77e-52 186
Msa0459390 MtrunA17_Chr5g0403321 28.228 457 300 10 49 494 33 472 2.62e-52 186
Msa0459390 MtrunA17_Chr3g0101621 28.279 488 299 13 20 494 8 457 3.47e-52 185
Msa0459390 MtrunA17_Chr1g0174451 26.775 493 332 10 51 535 37 508 3.96e-52 185
Msa0459390 MtrunA17_Chr4g0030711 27.848 474 306 12 70 525 54 509 4.66e-52 185
Msa0459390 MtrunA17_Chr3g0084921 27.953 508 323 14 23 516 13 491 5.00e-52 185
Msa0459390 MtrunA17_Chr6g0451781 27.470 506 339 11 40 531 70 561 6.51e-52 186
Msa0459390 MtrunA17_Chr5g0445461 28.243 478 315 11 23 494 11 466 6.89e-52 184
Msa0459390 MtrunA17_Chr8g0362701 27.189 434 295 7 92 521 74 490 1.07e-51 184
Msa0459390 MtrunA17_Chr3g0101821 27.729 458 307 7 50 501 35 474 1.17e-51 184
Msa0459390 MtrunA17_Chr1g0205361 27.069 447 309 8 49 494 33 463 1.44e-51 183
Msa0459390 MtrunA17_Chr1g0205371 27.354 446 309 5 49 494 34 464 1.63e-51 183
Msa0459390 MtrunA17_Chr3g0101811 28.051 467 293 11 50 494 37 482 1.68e-51 184
Msa0459390 MtrunA17_Chr4g0047661 25.889 506 344 11 15 511 19 502 1.70e-51 184
Msa0459390 MtrunA17_Chr3g0101691 27.066 484 318 10 23 494 11 471 1.89e-51 183
Msa0459390 MtrunA17_Chr5g0445451 26.471 476 326 7 23 494 11 466 2.55e-51 183
Msa0459390 MtrunA17_Chr4g0058201 26.694 487 327 10 48 524 26 492 2.62e-51 182
Msa0459390 MtrunA17_Chr7g0246131 28.035 453 306 6 49 495 33 471 4.10e-51 182
Msa0459390 MtrunA17_Chr8g0339331 27.767 497 331 13 51 533 39 521 5.20e-51 182
Msa0459390 MtrunA17_Chr4g0052851 28.571 462 300 11 34 494 18 450 9.59e-51 181
Msa0459390 MtrunA17_Chr5g0446161 28.450 471 300 11 33 494 24 466 1.03e-50 181
Msa0459390 MtrunA17_Chr5g0445531 28.348 448 298 10 50 494 38 465 1.20e-50 181
Msa0459390 MtrunA17_Chr7g0218611 26.403 481 334 10 38 514 21 485 1.35e-50 181
Msa0459390 MtrunA17_Chr6g0458561 28.144 501 333 12 44 532 48 533 1.61e-50 181
Msa0459390 MtrunA17_Chr1g0174481 28.000 475 324 10 23 494 9 468 2.34e-50 180
Msa0459390 MtrunA17_Chr4g0030701 27.033 492 332 11 51 531 36 511 2.72e-50 181
Msa0459390 MtrunA17_Chr6g0451691 26.824 507 335 11 48 531 39 532 2.94e-50 181
Msa0459390 MtrunA17_Chr4g0047631 26.523 509 344 11 10 514 15 497 4.01e-50 180
Msa0459390 MtrunA17_Chr3g0101651 26.813 455 302 8 50 494 38 471 4.74e-50 179
Msa0459390 MtrunA17_Chr7g0224551 28.326 466 293 12 47 495 28 469 5.23e-50 179
Msa0459390 MtrunA17_Chr5g0430111 28.506 435 282 10 24 448 12 427 5.95e-50 177
Msa0459390 MtrunA17_Chr1g0174471 27.542 472 313 10 52 516 52 501 6.54e-50 179
Msa0459390 MtrunA17_Chr5g0445381 26.978 493 329 11 6 494 32 497 7.51e-50 179
Msa0459390 MtrunA17_Chr5g0432751 26.962 497 319 14 49 525 32 504 8.01e-50 179
Msa0459390 MtrunA17_Chr6g0451741 25.560 536 355 11 20 533 39 552 1.11e-49 179
Msa0459390 MtrunA17_Chr1g0197891 27.876 452 309 7 49 500 33 467 1.13e-49 178
Msa0459390 MtrunA17_Chr1g0197881 27.824 478 325 8 23 500 9 466 1.15e-49 178
Msa0459390 MtrunA17_Chr2g0296651 26.860 484 326 9 48 525 29 490 1.60e-49 178
Msa0459390 MtrunA17_Chr1g0160851 25.951 447 314 8 49 494 33 463 1.65e-49 178
Msa0459390 MtrunA17_Chr5g0446151 29.956 454 282 12 50 494 41 467 1.87e-49 177
Msa0459390 MtrunA17_Chr4g0074581 27.273 462 314 7 48 499 67 516 2.06e-49 178
Msa0459390 MtrunA17_Chr3g0101761 28.381 451 299 7 50 494 35 467 2.11e-49 177
Msa0459390 MtrunA17_Chr4g0052861 26.611 481 330 9 48 525 30 490 2.43e-49 177
Msa0459390 MtrunA17_Chr4g0008101 26.535 505 339 9 48 532 37 529 2.44e-49 178
Msa0459390 MtrunA17_Chr1g0213671 27.176 471 317 10 32 494 21 473 2.89e-49 177
Msa0459390 MtrunA17_Chr3g0101751 27.443 481 323 8 20 494 14 474 3.33e-49 177
Msa0459390 MtrunA17_Chr3g0101721 27.195 467 320 7 32 494 19 469 4.25e-49 177
Msa0459390 MtrunA17_Chr6g0466901 28.000 500 337 11 47 531 30 521 6.72e-49 176
Msa0459390 MtrunA17_Chr3g0101801 27.236 492 327 10 16 494 1 474 9.51e-49 176
Msa0459390 MtrunA17_Chr1g0162801 27.049 488 328 10 16 494 1 469 1.11e-48 176
Msa0459390 MtrunA17_Chr1g0197851 27.197 478 328 8 26 500 7 467 1.49e-48 175
Msa0459390 MtrunA17_Chr4g0024771 26.458 480 325 11 19 494 11 466 1.60e-48 175
Msa0459390 MtrunA17_Chr7g0218601 26.501 483 332 12 37 514 20 484 2.00e-48 175
Msa0459390 MtrunA17_Chr4g0058261 27.083 480 320 12 52 518 64 526 2.99e-48 175
Msa0459390 MtrunA17_Chr5g0401691 26.562 448 308 8 48 494 49 476 3.97e-48 174
Msa0459390 MtrunA17_Chr6g0466941 28.144 501 338 12 46 531 29 522 4.10e-48 174
Msa0459390 MtrunA17_Chr7g0246151 27.670 412 285 4 87 495 68 469 4.17e-48 174
Msa0459390 MtrunA17_Chr8g0372331 58.140 129 54 0 405 533 3 131 8.92e-48 162
Msa0459390 MtrunA17_Chr7g0224561 27.957 465 294 12 48 495 29 469 9.43e-48 173
Msa0459390 MtrunA17_Chr1g0207841 25.966 466 306 10 70 516 55 500 1.67e-47 173
Msa0459390 MtrunA17_Chr3g0101571 26.819 481 322 14 49 525 35 489 2.01e-47 172
Msa0459390 MtrunA17_Chr1g0197871 27.191 445 307 7 50 494 34 461 2.14e-47 172
Msa0459390 MtrunA17_Chr3g0082701 29.084 502 331 13 48 532 37 530 2.43e-47 172
Msa0459390 MtrunA17_Chr4g0039391 27.778 450 289 13 90 525 72 499 2.57e-47 172
Msa0459390 MtrunA17_Chr7g0258221 25.825 515 352 11 23 526 10 505 3.09e-47 172
Msa0459390 MtrunA17_Chr4g0020041 26.392 485 325 10 20 494 6 468 3.42e-47 172
Msa0459390 MtrunA17_Chr8g0371761 51.007 149 58 2 345 482 1 145 3.43e-47 161
Msa0459390 MtrunA17_Chr6g0463801 26.638 473 313 9 41 505 28 474 4.59e-47 171
Msa0459390 MtrunA17_Chr7g0246121 28.571 434 298 4 61 494 45 466 6.60e-47 171
Msa0459390 MtrunA17_Chr3g0101831 26.923 494 335 9 13 501 3 475 7.28e-47 171
Msa0459390 MtrunA17_Chr5g0431511 25.667 487 336 11 50 526 33 503 8.95e-47 171
Msa0459390 MtrunA17_Chr6g0451641 27.328 494 340 10 48 531 37 521 1.12e-46 171
Msa0459390 MtrunA17_Chr4g0076161 26.000 450 313 7 49 494 36 469 1.42e-46 170
Msa0459390 MtrunA17_Chr2g0296661 27.088 443 297 9 77 511 56 480 1.96e-46 169
Msa0459390 MtrunA17_Chr1g0167321 27.824 478 318 11 25 494 8 466 5.42e-46 168
Msa0459390 MtrunA17_Chr3g0101581 26.130 509 333 16 28 525 16 492 6.26e-46 168
Msa0459390 MtrunA17_Chr1g0164211 26.770 452 308 8 47 494 28 460 6.38e-46 168
Msa0459390 MtrunA17_Chr4g0011901 27.212 452 304 10 51 495 30 463 6.56e-46 168
Msa0459390 MtrunA17_Chr4g0058191 24.790 476 338 10 53 524 28 487 7.24e-46 167
Msa0459390 MtrunA17_Chr5g0445421 25.263 475 306 9 24 494 90 519 8.90e-46 169
Msa0459390 MtrunA17_Chr5g0419451 27.252 444 299 11 56 494 62 486 1.10e-45 167
Msa0459390 MtrunA17_Chr1g0200951 28.346 508 329 15 30 526 46 529 8.76e-45 165
Msa0459390 MtrunA17_Chr1g0156101 25.208 480 340 9 39 508 21 491 1.00e-44 165
Msa0459390 MtrunA17_Chr7g0246181 28.604 437 298 5 61 495 45 469 1.12e-44 164
Msa0459390 MtrunA17_Chr8g0346261 27.027 481 323 13 52 525 86 545 1.68e-44 165
Msa0459390 MtrunA17_Chr4g0011921 25.996 477 327 9 23 494 7 462 4.99e-44 162
Msa0459390 MtrunA17_Chr8g0357421 26.804 485 319 11 23 494 6 467 1.26e-43 162
Msa0459390 MtrunA17_Chr6g0463791 23.992 496 339 11 6 494 1 465 6.15e-43 160
Msa0459390 MtrunA17_Chr8g0377341 26.758 512 312 17 15 494 15 495 9.19e-43 160
Msa0459390 MtrunA17_Chr3g0101741 26.406 409 277 6 90 495 3 390 1.93e-42 157
Msa0459390 MtrunA17_Chr4g0046321 27.862 463 286 15 51 492 35 470 2.25e-42 159
Msa0459390 MtrunA17_Chr7g0258211 26.490 453 294 11 59 494 48 478 2.54e-42 158
Msa0459390 MtrunA17_Chr4g0046351 27.430 463 288 15 51 492 35 470 1.50e-41 156
Msa0459390 MtrunA17_Chr4g0046331 27.802 464 287 16 51 492 35 472 2.21e-41 156
Msa0459390 MtrunA17_Chr8g0357431 26.078 487 321 9 23 494 6 468 2.63e-41 155
Msa0459390 MtrunA17_Chr5g0419691 25.721 451 320 8 46 494 25 462 8.17e-41 154
Msa0459390 MtrunA17_Chr1g0156081 25.053 471 330 10 51 509 57 516 9.89e-40 151
Msa0459390 MtrunA17_Chr4g0011961 25.319 470 324 11 32 494 12 461 1.20e-39 150
Msa0459390 MtrunA17_Chr5g0406651 24.401 459 330 8 39 494 19 463 9.91e-39 148
Msa0459390 MtrunA17_Chr4g0011981 26.281 449 310 10 51 494 30 462 1.65e-38 147
Msa0459390 MtrunA17_Chr2g0310351 37.126 167 102 1 326 492 1 164 3.15e-38 139
Msa0459390 MtrunA17_Chr5g0430071 29.286 280 187 5 233 505 59 334 3.45e-38 144
Msa0459390 MtrunA17_Chr8g0351801 24.439 446 301 9 73 494 51 484 5.35e-38 146
Msa0459390 MtrunA17_Chr4g0017411 25.956 497 331 16 34 525 15 479 9.87e-38 145
Msa0459390 MtrunA17_Chr1g0210091 24.263 441 318 10 80 514 93 523 1.01e-37 145
Msa0459390 MtrunA17_Chr2g0280261 26.105 475 313 11 41 505 25 471 1.46e-37 145
Msa0459390 MtrunA17_Chr4g0011871 24.390 451 327 8 46 494 25 463 5.70e-37 143
Msa0459390 MtrunA17_Chr4g0011881 25.055 451 312 11 51 494 31 462 3.59e-36 140
Msa0459390 MtrunA17_Chr4g0046681 31.696 224 144 4 313 532 18 236 4.36e-36 134
Msa0459390 MtrunA17_Chr8g0364651 22.634 486 353 10 49 526 29 499 9.77e-34 134
Msa0459390 MtrunA17_Chr1g0160861 27.881 269 187 3 245 511 60 323 1.36e-33 130
Msa0459390 MtrunA17_Chr2g0280071 23.770 488 346 11 50 525 63 536 4.10e-33 134
Msa0459390 MtrunA17_Chr2g0280121 25.400 437 298 11 104 526 88 510 5.45e-33 132
Msa0459390 MtrunA17_Chr2g0280081 24.722 449 318 10 87 526 568 1005 8.55e-33 133
Msa0459390 MtrunA17_Chr2g0280081 25.837 418 292 8 87 496 67 474 1.96e-28 120
Msa0459390 MtrunA17_Chr1g0174431 34.135 208 128 4 326 526 1 206 1.34e-32 124
Msa0459390 MtrunA17_Chr6g0451811 32.381 210 139 3 323 531 2 209 2.65e-32 123
Msa0459390 MtrunA17_Chr8g0390871 34.239 184 116 3 319 501 20 199 5.08e-32 123
Msa0459390 MtrunA17_Chr8g0387101 26.147 436 295 12 104 526 86 507 1.62e-31 127
Msa0459390 MtrunA17_Chr6g0451681 33.058 242 152 5 295 531 245 481 8.31e-31 125
Msa0459390 MtrunA17_Chr6g0451681 25.381 197 138 2 51 239 62 257 4.24e-11 65.5
Msa0459390 MtrunA17_Chr5g0409051 21.569 510 344 12 48 527 27 510 8.65e-31 125
Msa0459390 MtrunA17_Chr6g0451771 33.173 208 134 3 326 531 22 226 1.24e-30 119
Msa0459390 MtrunA17_Chr5g0402981 35.025 197 124 4 337 531 3 197 2.81e-30 117
Msa0459390 MtrunA17_Chr5g0413911 25.000 472 321 14 47 496 39 499 8.23e-30 123
Msa0459390 MtrunA17_Chr1g0156061 24.183 459 282 9 51 509 56 448 1.11e-29 122
Msa0459390 MtrunA17_Chr4g0046661 31.163 215 145 3 319 532 18 230 1.80e-29 116
Msa0459390 MtrunA17_Chr2g0314781 34.463 177 102 2 342 518 1 163 2.71e-29 113
Msa0459390 MtrunA17_Chr2g0280011 30.332 211 133 4 325 526 7 212 1.93e-28 112
Msa0459390 MtrunA17_Chr4g0046701 35.542 166 104 3 368 532 1 164 2.53e-28 110
Msa0459390 MtrunA17_Chr5g0431591 26.316 266 187 4 233 494 24 284 5.70e-28 114
Msa0459390 MtrunA17_Chr4g0058211 28.502 207 144 2 319 524 12 215 2.20e-27 109
Msa0459390 MtrunA17_Chr5g0446101 31.873 251 158 5 258 505 50 290 5.44e-27 111
Msa0459390 MtrunA17_Chr6g0477081 30.942 223 141 3 214 436 32 241 7.35e-27 108
Msa0459390 MtrunA17_Chr2g0280061 29.858 211 134 4 325 526 7 212 7.36e-27 108
Msa0459390 MtrunA17_Chr2g0280041 23.451 452 320 12 87 526 99 536 1.92e-26 113
Msa0459390 MtrunA17_Chr5g0430151 32.000 150 98 2 357 505 6 152 3.56e-24 99.8
Msa0459390 MtrunA17_Chr3g0086681 33.526 173 109 4 364 532 5 175 4.94e-24 99.4
Msa0459390 MtrunA17_Chr8g0364631 25.160 469 323 11 50 505 32 485 5.74e-24 105
Msa0459390 MtrunA17_Chr6g0463621 29.508 183 126 3 326 507 1 181 1.08e-22 96.3
Msa0459390 MtrunA17_Chr3g0101591 29.213 178 121 2 336 511 49 223 2.13e-22 96.3
Msa0459390 MtrunA17_Chr5g0423621 34.641 153 95 2 342 494 1 148 2.50e-22 94.4
Msa0459390 MtrunA17_Chr5g0445761 32.222 180 119 1 326 505 1 177 9.14e-22 93.6
Msa0459390 MtrunA17_Chr5g0402971 25.725 276 189 6 39 305 27 295 1.53e-21 95.5
Msa0459390 MtrunA17_Chr4g0011851 28.261 184 127 2 313 494 1 181 2.52e-21 92.4
Msa0459390 MtrunA17_Chr5g0430041 32.237 152 95 3 357 505 6 152 4.05e-21 90.9
Msa0459390 MtrunA17_Chr4g0011941 28.994 169 117 1 326 494 1 166 7.21e-21 90.9
Msa0459390 MtrunA17_Chr5g0445751 26.518 313 208 9 15 324 12 305 1.47e-20 92.8
Msa0459390 MtrunA17_Chr5g0445351 32.394 142 93 1 354 495 52 190 3.96e-20 89.0
Msa0459390 MtrunA17_Chr5g0429651 21.951 451 296 13 53 471 30 456 1.22e-18 89.0
Msa0459390 MtrunA17_Chr4g0028321 38.017 121 72 2 400 520 31 148 2.47e-18 82.4
Msa0459390 MtrunA17_Chr5g0444981 33.129 163 105 2 332 494 17 175 2.78e-18 84.0
Msa0459390 MtrunA17_Chr0c19g0493771 23.512 336 229 8 170 494 300 618 1.08e-17 86.7
Msa0459390 MtrunA17_Chr8g0387001 27.354 223 143 5 260 471 239 453 7.76e-17 83.6
Msa0459390 MtrunA17_Chr3g0117301 33.051 118 76 1 377 494 1 115 1.01e-16 76.6
Msa0459390 MtrunA17_Chr5g0445371 26.601 203 113 4 295 495 29 197 2.03e-16 79.0
Msa0459390 MtrunA17_Chr3g0116731 33.333 114 69 1 377 490 1 107 3.10e-16 75.9
Msa0459390 MtrunA17_Chr4g0038271 27.039 233 151 7 253 471 281 508 3.41e-16 81.6
Msa0459390 MtrunA17_Chr2g0334021 22.530 506 330 17 46 525 29 498 8.41e-16 80.1
Msa0459390 MtrunA17_Chr3g0101541 34.167 120 76 1 376 495 3 119 1.91e-15 73.2
Msa0459390 MtrunA17_Chr3g0104351 25.541 231 150 6 254 471 243 464 1.93e-15 79.0
Msa0459390 MtrunA17_Chr1g0204271 26.378 254 146 9 254 478 232 473 2.25e-15 79.0
Msa0459390 MtrunA17_Chr5g0445411 29.677 155 102 3 23 177 24 171 3.48e-15 73.9
Msa0459390 MtrunA17_Chr4g0046691 25.094 267 167 7 51 307 40 283 4.69e-15 76.3
Msa0459390 MtrunA17_Chr4g0056981 45.714 70 38 0 352 421 1 70 8.86e-15 69.3
Msa0459390 MtrunA17_Chr6g0463611 21.543 311 213 9 22 323 20 308 8.86e-15 75.5
Msa0459390 MtrunA17_Chr8g0351401 27.234 235 145 9 254 471 232 457 9.18e-15 77.0
Msa0459390 MtrunA17_Chr1g0174421 22.756 312 228 8 20 329 19 319 1.31e-14 75.1
Msa0459390 MtrunA17_Chr1g0164321 26.556 241 149 8 252 471 262 495 2.40e-14 75.9
Msa0459390 MtrunA17_Chr8g0348751 26.432 227 145 7 260 471 239 458 3.72e-14 75.1
Msa0459390 MtrunA17_Chr8g0381571 25.000 236 159 7 261 492 234 455 8.98e-14 73.6
Msa0459390 MtrunA17_Chr5g0430171 27.542 236 150 5 24 256 12 229 9.94e-14 70.9
Msa0459390 MtrunA17_Chr2g0293421 21.298 493 324 18 19 492 7 454 1.13e-13 73.6
Msa0459390 MtrunA17_Chr8g0381541 25.000 236 159 7 261 492 234 455 1.18e-13 73.6
Msa0459390 MtrunA17_Chr7g0255131 22.414 464 318 15 23 471 19 455 1.42e-13 73.2
Msa0459390 MtrunA17_Chr1g0176851 25.207 242 173 2 139 380 1 234 2.87e-13 69.7
Msa0459390 MtrunA17_Chr7g0225531 21.774 496 338 17 19 492 13 480 2.92e-13 72.4
Msa0459390 MtrunA17_Chr4g0011931 23.509 285 202 8 25 306 5 276 2.98e-13 70.5
Msa0459390 MtrunA17_Chr5g0445361 33.000 100 64 1 395 494 7 103 3.37e-13 67.0
Msa0459390 MtrunA17_Chr4g0011861 22.776 281 200 6 46 321 25 293 4.09e-13 70.5
Msa0459390 MtrunA17_Chr1g0179811 22.941 340 232 9 173 499 193 515 8.64e-13 70.9
Msa0459390 MtrunA17_Chr1g0163421 23.438 256 179 7 266 506 273 526 1.79e-12 69.7
Msa0459390 MtrunA17_Chr3g0135841 28.061 196 135 6 277 471 292 482 2.35e-12 69.3
Msa0459390 MtrunA17_Chr1g0163351 22.308 260 182 7 260 505 237 490 2.39e-12 69.3
Msa0459390 MtrunA17_Chr2g0313771 22.911 371 249 15 142 499 153 499 5.26e-12 68.2
Msa0459390 MtrunA17_Chr4g0030741 22.642 265 184 6 90 349 101 349 6.19e-12 67.4
Msa0459390 MtrunA17_Chr4g0046671 25.430 291 182 13 51 324 45 317 7.02e-12 66.6
Msa0459390 MtrunA17_Chr6g0449341 24.498 249 170 6 260 492 286 532 7.48e-12 67.8
Msa0459390 MtrunA17_Chr3g0119681 22.672 494 321 22 54 520 40 499 8.03e-12 67.8
Msa0459390 MtrunA17_Chr5g0431631 27.972 143 98 3 19 161 23 160 9.51e-12 63.5
Msa0459390 MtrunA17_Chr5g0396521 22.642 265 163 8 264 492 280 538 1.02e-11 67.4
Msa0459390 MtrunA17_Chr8g0351441 20.052 384 237 12 125 471 106 456 1.48e-11 67.0
Msa0459390 MtrunA17_Chr1g0163451 23.529 255 178 7 266 505 257 509 1.67e-11 66.6
Msa0459390 MtrunA17_Chr1g0151221 26.531 196 138 6 277 471 284 474 1.71e-11 66.6
Msa0459390 MtrunA17_Chr1g0163281 26.104 249 165 8 254 492 249 488 2.30e-11 66.2
Msa0459390 MtrunA17_Chr8g0351461 20.670 537 381 18 6 525 1 509 2.46e-11 66.2
Msa0459390 MtrunA17_Chr6g0449331 23.293 249 173 6 260 492 238 484 2.63e-11 66.2
Msa0459390 MtrunA17_Chr1g0183611 25.472 212 146 6 289 492 187 394 3.13e-11 65.5
Msa0459390 MtrunA17_Chr8g0351421 23.377 231 159 7 254 471 232 457 3.24e-11 65.9
Msa0459390 MtrunA17_Chr2g0310371 35.043 117 72 3 42 158 21 133 7.44e-11 60.5
Msa0459390 MtrunA17_Chr3g0107511 22.917 240 169 6 260 495 223 450 8.59e-11 64.3
Msa0459390 MtrunA17_Chr8g0380501 26.267 217 147 7 260 470 229 438 9.02e-11 64.3
Msa0459390 MtrunA17_Chr4g0076171 24.841 157 94 2 342 495 1 136 9.15e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459390 AT4G39950.1 51.830 519 243 4 19 531 20 537 0.0 563
Msa0459390 AT4G39950.2 51.830 519 243 4 19 531 60 577 0.0 562
Msa0459390 AT2G22330.2 53.416 483 223 2 50 531 81 562 0.0 557
Msa0459390 AT2G22330.1 53.416 483 223 2 50 531 58 539 0.0 556
Msa0459390 AT5G05260.2 53.170 489 221 5 50 531 40 527 0.0 553
Msa0459390 AT5G05260.1 51.329 489 198 7 50 531 40 495 2.73e-178 511
Msa0459390 AT5G35917.1 46.843 491 208 6 50 531 42 488 3.33e-159 462
Msa0459390 AT1G58260.1 46.154 494 255 4 47 531 34 525 2.17e-156 457
Msa0459390 AT1G79370.1 43.056 504 266 4 47 531 37 538 1.16e-148 438
Msa0459390 AT1G16410.1 40.848 519 295 5 25 531 15 533 4.91e-140 416
Msa0459390 AT1G16400.1 41.344 491 281 4 48 531 42 532 5.49e-136 405
Msa0459390 AT1G16410.2 39.250 400 233 4 25 414 15 414 2.77e-94 294
Msa0459390 AT1G01280.1 33.333 480 304 8 59 532 41 510 1.81e-84 271
Msa0459390 AT5G07990.1 32.136 529 323 12 23 535 4 512 2.22e-80 261
Msa0459390 AT4G12320.1 29.000 500 340 8 32 527 24 512 4.35e-67 226
Msa0459390 AT4G12300.1 29.116 498 337 9 33 527 26 510 2.07e-63 216
Msa0459390 AT2G40890.1 27.220 518 341 12 25 532 11 502 5.90e-62 212
Msa0459390 AT4G37430.1 27.930 512 331 13 23 525 10 492 1.64e-59 205
Msa0459390 AT4G22710.1 27.727 440 305 6 90 527 91 519 1.97e-58 203
Msa0459390 AT4G22690.1 27.727 440 305 6 90 527 122 550 3.36e-58 203
Msa0459390 AT4G12310.1 27.984 486 321 11 59 533 53 520 3.44e-56 197
Msa0459390 AT2G45550.1 27.545 501 329 12 23 515 9 483 1.95e-55 194
Msa0459390 AT4G31940.1 27.273 495 341 11 52 531 33 523 2.60e-55 194
Msa0459390 AT5G57220.1 29.241 448 289 11 50 494 30 452 6.23e-55 192
Msa0459390 AT2G45560.1 27.655 452 304 9 50 494 38 473 2.46e-54 191
Msa0459390 AT4G37340.1 27.689 502 326 16 46 535 24 500 2.95e-54 191
Msa0459390 AT4G37320.1 27.766 479 311 11 23 494 7 457 1.51e-53 189
Msa0459390 AT2G23190.1 27.044 477 320 13 24 495 49 502 1.58e-53 190
Msa0459390 AT5G67310.1 26.059 472 316 12 47 511 39 484 1.60e-53 189
Msa0459390 AT2G45570.1 28.814 413 279 5 87 494 72 474 1.66e-53 189
Msa0459390 AT5G25120.1 25.498 502 342 13 19 512 2 479 1.83e-53 189
Msa0459390 AT3G28740.1 29.605 456 291 13 45 494 34 465 1.86e-53 189
Msa0459390 AT4G15330.1 26.819 481 329 10 50 524 38 501 6.45e-53 187
Msa0459390 AT2G25160.1 28.517 526 347 13 23 532 7 519 6.80e-53 188
Msa0459390 AT5G44620.1 26.483 472 331 7 59 527 55 513 1.71e-52 187
Msa0459390 AT4G36220.1 27.083 480 308 12 57 517 47 503 1.81e-52 187
Msa0459390 AT4G37410.1 26.916 509 335 14 23 525 12 489 1.17e-51 184
Msa0459390 AT4G37370.1 27.311 476 316 12 23 494 7 456 1.21e-51 184
Msa0459390 AT4G12330.1 28.604 444 293 10 92 527 85 512 1.37e-51 184
Msa0459390 AT4G31970.1 26.923 494 343 10 52 531 33 522 1.39e-51 184
Msa0459390 AT5G04330.1 28.603 458 295 15 51 495 33 471 5.38e-51 182
Msa0459390 AT3G26330.1 26.549 452 310 8 48 494 29 463 1.53e-50 181
Msa0459390 AT4G37330.1 28.747 487 304 14 14 494 5 454 2.12e-50 180
Msa0459390 AT3G20140.1 27.743 483 308 16 50 518 42 497 2.15e-50 181
Msa0459390 AT3G61040.1 28.571 455 300 11 45 494 28 462 2.29e-50 181
Msa0459390 AT5G36220.1 26.157 497 320 12 15 500 9 469 3.38e-50 180
Msa0459390 AT3G10560.1 26.448 518 357 14 15 526 14 513 4.63e-50 180
Msa0459390 AT5G04630.1 26.667 525 357 12 13 526 2 509 4.77e-50 180
Msa0459390 AT4G37310.1 26.506 498 344 14 48 536 28 512 4.98e-50 180
Msa0459390 AT2G14100.1 26.754 456 307 11 87 533 78 515 5.57e-50 180
Msa0459390 AT2G23220.1 27.655 452 303 11 47 495 43 473 6.02e-50 180
Msa0459390 AT3G26300.1 26.891 476 325 11 24 494 6 463 6.51e-50 179
Msa0459390 AT1G13110.1 26.294 483 321 12 45 512 27 489 7.93e-50 179
Msa0459390 AT3G26320.1 26.681 461 298 11 48 494 29 463 8.14e-50 179
Msa0459390 AT3G32047.1 26.573 429 297 6 90 515 80 493 3.30e-49 177
Msa0459390 AT4G31500.1 25.778 450 319 8 49 495 28 465 6.23e-49 176
Msa0459390 AT5G25180.1 23.890 473 334 10 47 512 26 479 8.41e-49 176
Msa0459390 AT3G53300.1 26.964 471 296 13 45 495 23 465 1.20e-48 176
Msa0459390 AT1G33720.1 26.477 491 324 13 19 494 5 473 1.47e-48 176
Msa0459390 AT4G15360.1 27.412 456 299 10 50 494 40 474 2.11e-48 176
Msa0459390 AT3G25180.1 25.869 518 345 12 16 527 8 492 2.39e-48 175
Msa0459390 AT4G13770.1 26.360 478 318 11 25 494 14 465 2.42e-48 175
Msa0459390 AT5G06905.1 25.755 497 333 11 28 505 9 488 2.45e-48 175
Msa0459390 AT4G37360.1 28.976 459 291 12 46 494 24 457 5.69e-48 174
Msa0459390 AT1G13090.2 26.282 468 306 10 42 494 20 463 7.17e-48 173
Msa0459390 AT5G35715.1 26.304 441 301 11 90 523 3 426 8.85e-48 172
Msa0459390 AT1G74110.1 27.564 468 317 13 38 494 51 507 1.75e-47 173
Msa0459390 AT5G06900.1 27.069 447 303 10 50 492 34 461 1.77e-47 173
Msa0459390 AT2G27000.1 26.351 444 297 7 94 525 81 506 1.90e-47 173
Msa0459390 AT5G25140.1 24.701 502 346 14 19 512 2 479 2.41e-47 172
Msa0459390 AT1G11610.1 27.133 457 310 11 47 499 30 467 3.17e-47 172
Msa0459390 AT1G11610.2 27.193 456 309 11 47 498 30 466 3.24e-47 172
Msa0459390 AT3G52970.2 28.059 474 304 16 47 495 33 494 6.77e-47 172
Msa0459390 AT1G74550.1 26.078 487 328 12 50 531 27 486 7.26e-47 171
Msa0459390 AT3G44250.1 27.755 490 318 14 45 523 23 487 8.07e-47 171
Msa0459390 AT3G48300.1 29.464 448 289 13 52 496 31 454 1.21e-46 170
Msa0459390 AT3G48300.2 29.464 448 289 13 52 496 33 456 1.26e-46 170
Msa0459390 AT2G45580.1 27.845 413 283 7 87 494 72 474 1.41e-46 171
Msa0459390 AT3G61880.1 26.931 479 328 12 52 525 68 529 1.46e-46 171
Msa0459390 AT4G15330.2 26.757 441 300 10 92 524 48 473 1.51e-46 170
Msa0459390 AT3G52970.1 27.862 463 305 14 47 495 33 480 1.67e-46 170
Msa0459390 AT4G13310.1 26.316 475 315 14 50 512 32 483 2.14e-46 169
Msa0459390 AT3G61880.2 26.931 479 328 12 52 525 68 529 3.45e-46 170
Msa0459390 AT3G48310.1 26.539 471 317 11 47 512 29 475 4.37e-46 169
Msa0459390 AT5G25130.1 25.200 500 346 12 19 512 2 479 5.54e-46 168
Msa0459390 AT4G31950.1 27.419 496 327 14 52 531 33 511 8.39e-46 168
Msa0459390 AT3G20950.1 25.911 494 329 15 48 525 40 512 8.74e-46 168
Msa0459390 AT1G74540.1 26.680 491 293 15 47 512 24 472 1.07e-45 167
Msa0459390 AT3G26310.1 25.383 457 301 8 52 494 32 462 1.10e-45 167
Msa0459390 AT3G20940.1 25.051 487 339 11 48 525 40 509 1.23e-45 168
Msa0459390 AT5G10610.1 25.249 503 350 10 24 524 11 489 1.30e-45 167
Msa0459390 AT5G35920.1 51.020 147 71 1 385 531 8 153 1.62e-45 157
Msa0459390 AT3G26830.1 23.799 458 326 7 45 495 23 464 2.00e-45 167
Msa0459390 AT4G37400.1 26.739 460 315 12 70 525 48 489 2.11e-45 167
Msa0459390 AT3G48280.1 26.441 503 337 13 32 527 14 490 2.50e-45 166
Msa0459390 AT3G26180.1 26.039 457 315 10 46 494 26 467 2.73e-45 167
Msa0459390 AT3G20080.2 27.383 493 316 16 50 525 42 509 3.19e-45 167
Msa0459390 AT3G20080.1 27.383 493 316 16 50 525 42 509 3.19e-45 167
Msa0459390 AT4G13290.1 26.226 469 315 12 50 512 33 476 3.52e-45 166
Msa0459390 AT3G20130.1 25.901 444 306 7 90 525 80 508 5.89e-45 166
Msa0459390 AT1G50520.1 26.942 412 282 9 90 494 81 480 8.41e-45 166
Msa0459390 AT3G26150.1 26.362 459 313 11 47 496 27 469 1.61e-44 164
Msa0459390 AT5G10600.1 24.843 479 336 10 18 494 19 475 1.75e-44 165
Msa0459390 AT5G57260.1 25.263 475 329 11 49 513 29 487 1.92e-44 164
Msa0459390 AT3G26160.1 26.611 481 323 12 23 494 8 467 2.20e-44 164
Msa0459390 AT2G46660.1 26.186 485 317 13 52 532 72 519 3.28e-44 164
Msa0459390 AT3G20090.2 26.622 447 299 12 90 525 81 509 6.52e-44 163
Msa0459390 AT5G42590.1 27.521 476 313 13 23 494 15 462 6.82e-44 162
Msa0459390 AT1G33730.1 29.769 346 222 7 156 494 6 337 9.03e-44 159
Msa0459390 AT1G33730.2 29.769 346 222 7 156 494 6 337 9.03e-44 159
Msa0459390 AT5G47990.1 27.051 451 291 13 90 525 80 507 1.02e-43 162
Msa0459390 AT3G48270.1 26.809 470 315 11 47 511 28 473 1.03e-43 162
Msa0459390 AT2G42250.1 25.153 489 332 11 23 496 12 481 1.13e-43 162
Msa0459390 AT5G04660.1 26.770 452 302 12 87 526 78 512 1.38e-43 162
Msa0459390 AT1G66540.1 29.006 362 234 8 137 494 2 344 1.72e-43 159
Msa0459390 AT3G26190.1 25.163 461 317 9 45 495 23 465 2.86e-43 161
Msa0459390 AT3G20120.4 25.322 466 317 13 73 525 59 506 3.72e-43 161
Msa0459390 AT3G26210.1 25.420 417 281 9 90 494 68 466 4.00e-43 160
Msa0459390 AT3G53280.1 26.282 468 301 12 45 495 23 463 7.36e-43 160
Msa0459390 AT3G26170.1 24.793 484 336 11 19 494 4 467 8.94e-43 160
Msa0459390 AT2G24180.1 24.625 467 315 11 48 501 34 476 1.07e-42 159
Msa0459390 AT3G48290.1 26.813 455 300 11 47 495 30 457 1.10e-42 159
Msa0459390 AT3G20110.1 25.714 525 340 19 17 525 7 497 1.48e-42 159
Msa0459390 AT1G01190.2 26.940 464 301 14 41 494 69 504 3.34e-42 159
Msa0459390 AT1G01190.1 26.940 464 301 14 41 494 64 499 3.79e-42 159
Msa0459390 AT4G15350.1 24.324 444 314 6 90 525 73 502 4.77e-42 158
Msa0459390 AT3G26270.1 25.259 483 317 12 47 511 29 485 7.35e-42 157
Msa0459390 AT2G30770.1 25.053 471 328 11 47 511 30 481 9.59e-42 157
Msa0459390 AT1G50560.1 27.394 449 297 12 90 526 81 512 1.25e-41 157
Msa0459390 AT3G20130.2 25.785 446 300 10 93 525 53 480 1.62e-41 156
Msa0459390 AT5G42580.1 24.939 409 280 7 90 494 77 462 1.80e-41 156
Msa0459390 AT1G28430.1 24.099 444 317 10 90 526 78 508 2.16e-41 156
Msa0459390 AT1G11600.1 25.270 463 319 7 50 499 35 483 2.78e-41 155
Msa0459390 AT1G33720.4 28.090 356 231 7 148 494 2 341 4.11e-41 152
Msa0459390 AT1G33720.3 28.090 356 231 7 148 494 2 341 4.11e-41 152
Msa0459390 AT1G33720.5 28.090 356 231 7 148 494 2 341 4.11e-41 152
Msa0459390 AT2G30750.1 25.478 471 326 11 47 511 30 481 4.39e-41 155
Msa0459390 AT1G13100.1 24.943 441 296 11 87 511 59 480 5.05e-41 154
Msa0459390 AT3G26290.1 26.824 466 301 10 43 494 24 463 1.54e-40 153
Msa0459390 AT3G26280.1 23.121 519 349 13 22 524 14 498 1.81e-40 153
Msa0459390 AT3G26290.2 26.824 466 301 10 43 494 37 476 2.35e-40 153
Msa0459390 AT3G10570.1 26.269 453 302 11 87 526 80 513 2.37e-40 153
Msa0459390 AT1G13080.1 25.054 459 316 11 47 495 28 468 2.43e-40 153
Msa0459390 AT3G26280.2 23.121 519 349 13 22 524 31 515 2.82e-40 153
Msa0459390 AT3G20960.2 26.699 412 281 8 90 494 79 476 3.72e-40 153
Msa0459390 AT3G20100.1 24.464 466 322 11 59 514 50 495 6.24e-40 152
Msa0459390 AT5G24950.1 23.270 477 340 11 42 511 24 481 1.06e-39 151
Msa0459390 AT1G66540.2 31.915 282 174 6 213 494 22 285 1.06e-39 147
Msa0459390 AT5G24960.1 26.186 485 333 12 47 524 30 496 5.61e-39 149
Msa0459390 AT5G36220.2 29.373 303 187 6 202 500 44 323 1.07e-38 145
Msa0459390 AT2G45580.2 32.540 252 160 6 248 494 74 320 1.90e-38 144
Msa0459390 AT3G26200.1 23.965 459 327 9 44 495 22 465 2.30e-38 147
Msa0459390 AT3G48320.1 26.947 475 310 13 47 512 29 475 6.69e-38 146
Msa0459390 AT3G48290.2 25.105 478 305 13 47 495 30 483 1.59e-37 145
Msa0459390 AT4G15380.1 22.588 456 318 9 87 530 77 509 2.55e-37 145
Msa0459390 AT1G64940.1 24.517 518 365 14 21 525 4 508 3.92e-37 144
Msa0459390 AT3G26230.1 23.554 484 335 12 23 494 5 465 2.19e-36 142
Msa0459390 AT5G09970.1 25.605 496 320 13 23 495 36 505 5.51e-36 141
Msa0459390 AT1G33720.2 26.247 381 231 8 148 494 2 366 1.07e-35 138
Msa0459390 AT3G20120.2 26.031 388 259 11 148 525 1 370 1.17e-35 137
Msa0459390 AT3G20120.3 26.031 388 259 11 148 525 1 370 1.17e-35 137
Msa0459390 AT3G20120.1 26.031 388 259 11 148 525 1 370 1.17e-35 137
Msa0459390 AT2G05180.1 25.984 381 260 7 90 465 79 442 1.86e-35 138
Msa0459390 AT3G26220.1 23.859 482 338 9 25 494 4 468 6.98e-35 137
Msa0459390 AT2G30490.1 23.649 444 304 11 86 514 67 490 9.80e-35 137
Msa0459390 AT3G20960.1 26.031 388 266 8 115 495 1 374 2.04e-34 135
Msa0459390 AT3G20090.1 26.735 389 256 12 148 525 1 371 5.22e-33 130
Msa0459390 AT1G64930.1 24.498 498 333 13 50 525 32 508 6.16e-33 132
Msa0459390 AT1G13710.1 25.126 398 276 10 103 494 101 482 1.19e-32 131
Msa0459390 AT4G20240.1 24.697 413 270 11 47 445 30 415 3.77e-32 129
Msa0459390 AT2G02580.1 23.348 454 326 8 48 496 29 465 4.84e-32 129
Msa0459390 AT3G61040.2 26.509 381 258 10 45 420 28 391 6.19e-32 127
Msa0459390 AT3G20080.4 26.952 397 246 16 148 525 1 372 7.80e-32 127
Msa0459390 AT3G20080.5 26.952 397 246 16 148 525 1 372 7.80e-32 127
Msa0459390 AT3G20080.6 26.952 397 246 16 148 525 1 372 7.80e-32 127
Msa0459390 AT3G20080.3 26.952 397 246 16 148 525 1 372 7.80e-32 127
Msa0459390 AT3G20935.1 30.244 205 136 4 325 525 133 334 4.05e-31 124
Msa0459390 AT4G13310.2 25.594 379 253 11 50 419 32 390 6.84e-31 124
Msa0459390 AT2G27010.1 28.000 250 167 6 281 525 243 484 3.96e-30 124
Msa0459390 AT2G25160.2 27.632 380 258 9 23 392 6 378 4.52e-30 122
Msa0459390 AT1G64950.1 25.268 467 305 16 50 494 32 476 6.61e-30 123
Msa0459390 AT2G45580.3 25.588 340 241 5 87 421 72 404 9.16e-30 121
Msa0459390 AT3G03470.1 24.622 463 317 13 49 494 30 477 1.35e-29 122
Msa0459390 AT2G12190.1 23.913 460 322 10 50 494 32 478 7.13e-29 120
Msa0459390 AT3G25180.2 24.282 383 270 9 16 392 8 376 9.53e-27 112
Msa0459390 AT5G24960.2 25.729 377 262 8 47 420 30 391 2.06e-26 111
Msa0459390 AT1G13080.2 26.744 258 179 6 243 495 98 350 3.87e-26 110
Msa0459390 AT5G25900.1 22.889 450 313 10 57 494 50 477 3.99e-26 112
Msa0459390 AT4G20240.2 24.806 387 249 11 47 419 30 388 6.11e-26 110
Msa0459390 AT1G64900.1 23.673 452 316 11 87 525 68 503 1.07e-25 110
Msa0459390 AT3G26180.2 29.084 251 167 6 252 494 86 333 6.92e-25 106
Msa0459390 AT1G58265.1 41.818 110 61 1 416 522 12 121 9.90e-24 98.2
Msa0459390 AT3G53290.1 25.060 415 272 12 106 515 11 391 1.44e-23 103
Msa0459390 AT5G61320.1 24.819 415 279 9 87 494 68 456 4.00e-23 103
Msa0459390 AT3G56630.1 22.345 452 326 13 53 493 30 467 8.47e-21 95.9
Msa0459390 AT1G34540.1 21.286 451 330 13 53 492 30 466 1.60e-18 89.0
Msa0459390 AT1G13090.1 26.007 273 173 6 42 305 20 272 7.93e-18 84.7
Msa0459390 AT5G58860.1 21.856 485 298 16 30 471 10 456 9.50e-18 86.7
Msa0459390 AT1G19630.1 25.296 253 167 9 261 506 224 461 6.74e-16 80.9
Msa0459390 AT5G23190.1 25.751 233 154 7 253 471 261 488 7.73e-16 80.9
Msa0459390 AT4G39500.2 26.291 213 152 3 283 492 275 485 3.79e-15 78.6
Msa0459390 AT4G39500.1 26.291 213 152 3 283 492 225 435 4.37e-15 78.2
Msa0459390 AT1G31800.1 22.143 420 283 15 103 505 158 550 1.00e-14 77.4
Msa0459390 AT2G44890.1 21.883 393 273 10 142 520 123 495 3.17e-14 75.9
Msa0459390 AT3G53305.1 30.833 120 82 1 90 208 3 122 6.53e-14 73.6
Msa0459390 AT1G63710.1 21.967 478 313 14 48 488 24 478 3.11e-13 72.8
Msa0459390 AT3G53130.1 20.794 428 304 13 76 490 101 506 9.79e-13 71.2
Msa0459390 AT1G13140.1 23.077 247 168 7 253 485 244 482 1.81e-12 70.1
Msa0459390 AT4G00360.1 21.169 496 336 18 53 512 29 505 2.43e-12 69.7
Msa0459390 AT2G27690.1 25.424 236 152 9 254 483 230 447 2.45e-12 69.7
Msa0459390 AT3G01900.1 19.868 453 324 13 54 492 32 459 5.71e-12 68.6
Msa0459390 AT5G08250.2 24.359 234 157 7 253 471 258 486 5.81e-12 68.6
Msa0459390 AT5G08250.1 24.359 234 157 7 253 471 196 424 6.06e-12 68.6
Msa0459390 AT2G45560.3 22.749 211 154 4 50 259 38 240 7.22e-12 65.9
Msa0459390 AT5G63450.2 22.404 366 249 13 142 492 184 529 1.35e-11 67.4
Msa0459390 AT5G63450.1 22.404 366 249 13 142 492 126 471 1.38e-11 67.4
Msa0459390 AT4G39480.1 21.392 388 265 15 140 492 100 482 1.81e-11 67.0
Msa0459390 AT5G02900.1 23.729 413 256 16 101 492 73 447 4.04e-11 65.9
Msa0459390 AT3G14640.1 21.292 418 292 15 92 499 100 490 4.42e-11 65.9
Msa0459390 AT3G14640.2 21.292 418 292 15 92 499 122 512 4.51e-11 65.9
Msa0459390 AT2G23180.1 21.371 248 177 5 260 492 237 481 5.52e-11 65.5
Msa0459390 AT3G30180.1 25.862 232 158 6 266 494 218 438 6.79e-11 65.1

Find 137 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACTAGTTGTAGGTTTAT+TGG 0.151493 3_3:+55885694 None:intergenic
AAGATTGATTCTTGATATAT+TGG 0.187745 3_3:+55881884 None:intergenic
GTTGGATTCTCTCTTCAATA+AGG 0.227252 3_3:+55885063 None:intergenic
GCAATTGTGGGACAAATAAT+AGG 0.239692 3_3:+55885602 None:intergenic
ATTTCCTTCGTTGTCAATAA+TGG 0.241142 3_3:+55884963 None:intergenic
TAAGGTTCAGTCCAAACTTT+TGG 0.270261 3_3:+55882089 None:intergenic
GTTTAGGAATATCTGATTCT+TGG 0.283032 3_3:+55882270 None:intergenic
GAAGAATTAGACAATATAAT+TGG 0.286472 3_3:-55882308 Msa0459390:CDS
ATTATTGTGGTAATGTGTTT+AGG 0.290963 3_3:-55885304 Msa0459390:CDS
ATCCATTCAACTGCGTTTGA+TGG 0.297076 3_3:+55882377 None:intergenic
TATGAGTGTAATTCATAGTT+TGG 0.297256 3_3:+55885888 None:intergenic
GATTACTCCATCATTCCTTT+TGG 0.299025 3_3:-55885856 Msa0459390:CDS
GGCCATCCATAGGTTTATTA+AGG 0.306142 3_3:-55881728 Msa0459390:three_prime_UTR
CTCATTTAAGTGGTATCTTA+AGG 0.307514 3_3:+55885790 None:intergenic
TTGGGAGAAATCCAAAAGTT+TGG 0.332988 3_3:-55882100 Msa0459390:CDS
TCGATCCATCATTCCATTGT+TGG 0.344020 3_3:+55885045 None:intergenic
AAAGATATGAACTTCAATTC+TGG 0.353329 3_3:+55882008 None:intergenic
TCAAATTCACTTCTGATTGA+AGG 0.357397 3_3:-55881529 Msa0459390:three_prime_UTR
CGTTCTGGTTTGAATTTGTA+AGG 0.360711 3_3:+55882071 None:intergenic
AGATTGATTCTTGATATATT+GGG 0.365747 3_3:+55881885 None:intergenic
CAAATAAAACATAAGATTAT+CGG 0.368377 3_3:+55885379 None:intergenic
AAACTATGAATTACACTCAT+AGG 0.369097 3_3:-55885886 Msa0459390:CDS
TTGTATATCCAACTAGTTGT+AGG 0.369135 3_3:+55885686 None:intergenic
TTGGATTCTCTCTTCAATAA+GGG 0.375834 3_3:+55885064 None:intergenic
TCCTAAACTCAACTTCTTGA+AGG 0.382284 3_3:-55882255 Msa0459390:CDS
ACCACAGTTCTTGTACCCTT+TGG 0.390373 3_3:-55885494 Msa0459390:CDS
ACAATATAATTGGAAAAGAT+AGG 0.390965 3_3:-55882298 Msa0459390:CDS
GGTATGGAGGATGGAGGGCC+AGG 0.393083 3_3:-55885248 Msa0459390:CDS
GCCTTCAAGAAGTTGAGTTT+AGG 0.399976 3_3:+55882254 None:intergenic
TAGGCCATGGTTTGGGACCG+GGG 0.403198 3_3:+55885744 None:intergenic
AGGAATGATGGAGTAATCTA+AGG 0.408267 3_3:+55885861 None:intergenic
GAACGTCATCTTAAGAATGA+TGG 0.410186 3_3:-55882053 Msa0459390:CDS
TCATTCTTAAGATGACGTTC+TGG 0.411841 3_3:+55882056 None:intergenic
CCAATAAACCTACAACTAGT+TGG 0.412748 3_3:-55885694 Msa0459390:CDS
TTCTACGCAGGAATTGATAA+TGG 0.413931 3_3:-55882414 Msa0459390:intron
TTTCCGCCTTCATCCCATTA+CGG 0.419452 3_3:-55882216 Msa0459390:CDS
TCAAGAAGATTACCAACTAT+AGG 0.420856 3_3:+55885725 None:intergenic
AAACGCAGTTGAATGGATAT+TGG 0.424038 3_3:-55882372 Msa0459390:CDS
AGGCCATGGTTTGGGACCGG+GGG 0.425493 3_3:+55885745 None:intergenic
ACCAACTATAGGCCATGGTT+TGG 0.425686 3_3:+55885736 None:intergenic
CCCCTTGTGTGGCCATCCAT+AGG 0.426851 3_3:-55881738 Msa0459390:three_prime_UTR
TAGTTGGATATACAAAATAA+TGG 0.430785 3_3:-55885678 Msa0459390:CDS
ACTTGACTTAGATGGTCATA+AGG 0.437209 3_3:-55885132 Msa0459390:CDS
ATGGTGGCCTTGTGAATGTT+AGG 0.440251 3_3:-55885340 Msa0459390:CDS
CAATTGTGGGACAAATAATA+GGG 0.443754 3_3:+55885603 None:intergenic
AATACAAGGTACTTCGGAAA+AGG 0.444982 3_3:-55885269 Msa0459390:CDS
GGTTACTCCATGGCTTCACT+TGG 0.446859 3_3:-55881917 Msa0459390:CDS
CCAACTATAGGCCATGGTTT+GGG 0.447196 3_3:+55885737 None:intergenic
CAAGAATTCATGGGCAATTG+TGG 0.451132 3_3:+55885589 None:intergenic
TGCTTGGAAGAAGTGGTATT+GGG 0.451332 3_3:-55882118 Msa0459390:CDS
TTGAGGTTACTTGACTTAGA+TGG 0.453107 3_3:-55885140 Msa0459390:CDS
ATAGGCCATGGTTTGGGACC+GGG 0.457093 3_3:+55885743 None:intergenic
ATCCATCAAACGCAGTTGAA+TGG 0.459197 3_3:-55882379 Msa0459390:CDS
GGTTGTCCTGCTGTTATGCT+TGG 0.460769 3_3:-55881969 Msa0459390:CDS
ATATCGCTCGCCATGCATAT+CGG 0.465212 3_3:+55885536 None:intergenic
ACCAATGGCTTCAACACAAA+AGG 0.469591 3_3:-55885412 Msa0459390:CDS
GGAAATTACTTCATACCAAA+GGG 0.475466 3_3:-55882152 Msa0459390:CDS
GGAACATTGAAATCCGTAAT+GGG 0.476470 3_3:+55882203 None:intergenic
GCAGCAAAGCCACGATTAGC+AGG 0.479151 3_3:-55881816 Msa0459390:CDS
CTGCTTGGAAGAAGTGGTAT+TGG 0.479474 3_3:-55882119 Msa0459390:CDS
TATAGGCCATGGTTTGGGAC+CGG 0.481312 3_3:+55885742 None:intergenic
ACAACACCTTAATAAACCTA+TGG 0.481659 3_3:+55881722 None:intergenic
TACAAGGAAAAGAGGCCAAA+AGG 0.482640 3_3:+55885841 None:intergenic
AGCAGTACATGACTTCCCTT+TGG 0.484500 3_3:+55882137 None:intergenic
GGCTTTGCTGCCACCGTCAG+TGG 0.488213 3_3:+55881828 None:intergenic
ACTAAGGCATTCGGTAAAAG+AGG 0.491654 3_3:-55881567 Msa0459390:three_prime_UTR
TTATAGGATTCTCATTTAAG+TGG 0.495254 3_3:+55885780 None:intergenic
GGATGGAGGGCCAGGTCTTG+AGG 0.500026 3_3:-55885240 Msa0459390:CDS
TCTCTCCACTCAGGCACCAA+TGG 0.503758 3_3:-55885427 Msa0459390:CDS
AGAATCCAACAATGGAATGA+TGG 0.506655 3_3:-55885050 Msa0459390:CDS
AAGGTACTTCGGAAAAGGTA+TGG 0.508812 3_3:-55885264 Msa0459390:CDS
TTCTGATTGAAGGATTTGCT+CGG 0.515571 3_3:-55881519 Msa0459390:three_prime_UTR
AAGAATTCATGGGCAATTGT+GGG 0.516154 3_3:+55885590 None:intergenic
GGGAACATTGAAATCCGTAA+TGG 0.516584 3_3:+55882202 None:intergenic
CCCAAACCATGGCCTATAGT+TGG 0.526778 3_3:-55885737 Msa0459390:CDS
GGATAACATGGACATTTCCT+AGG 0.529153 3_3:+55885624 None:intergenic
TGGAAATTACTTCATACCAA+AGG 0.531613 3_3:-55882153 Msa0459390:CDS
CTTGACTTAGATGGTCATAA+GGG 0.532427 3_3:-55885131 Msa0459390:CDS
AAAGAGGCCAAAAGGAATGA+TGG 0.532541 3_3:+55885849 None:intergenic
TGTGCTTAATTGATTGAGCT+TGG 0.533136 3_3:+55885959 None:intergenic
ATTGACAACGAAGGAAATCA+AGG 0.534518 3_3:-55884958 Msa0459390:CDS
TTGTACCCTTTGGCGAACAA+TGG 0.535517 3_3:-55885484 Msa0459390:CDS
AAGGGAAGTCATGTACTGCT+TGG 0.539237 3_3:-55882134 Msa0459390:CDS
TCTACGAATGATACAATGGT+TGG 0.539665 3_3:-55882173 Msa0459390:CDS
TGAAATCCGTAATGGGATGA+AGG 0.540525 3_3:+55882210 None:intergenic
AAGTCAAGTAACCTCAAGCA+TGG 0.541430 3_3:+55885146 None:intergenic
CATGTACTGCTTGGAAGAAG+TGG 0.547503 3_3:-55882125 Msa0459390:CDS
AGACAAAGGGTGTCGTACAT+AGG 0.549750 3_3:+55881647 None:intergenic
GGCCATGGTTTGGGACCGGG+GGG 0.550944 3_3:+55885746 None:intergenic
AACGTCATCTTAAGAATGAT+GGG 0.552555 3_3:-55882052 Msa0459390:CDS
TTGTATAACAAATGCAACAA+TGG 0.555069 3_3:-55885359 Msa0459390:CDS
CACCTTAATAAACCTATGGA+TGG 0.561154 3_3:+55881726 None:intergenic
TACAATTCTCCTGCTAATCG+TGG 0.561490 3_3:+55881807 None:intergenic
GTGCACTCCAAGTGAAGCCA+TGG 0.562249 3_3:+55881910 None:intergenic
TGTATCATTCGTAGAGACAT+GGG 0.564941 3_3:+55882181 None:intergenic
TTCGGAAAAGGTATGGAGGA+TGG 0.565742 3_3:-55885257 Msa0459390:CDS
AGATTACCAACTATAGGCCA+TGG 0.565983 3_3:+55885731 None:intergenic
TGCTCAATTTCCTCAAGACC+TGG 0.566522 3_3:+55885230 None:intergenic
TGCATCAAGGCCGATATGCA+TGG 0.567439 3_3:-55885546 Msa0459390:CDS
AAACAATAAGCAAGGCTCAA+AGG 0.568500 3_3:+55885931 None:intergenic
CTATTAGCTAGGTTACTCCA+TGG 0.569861 3_3:-55881927 Msa0459390:CDS
GACAAATAATAGGGATAACA+TGG 0.579040 3_3:+55885612 None:intergenic
ATCTCTTGATGAGCCACTGA+CGG 0.581210 3_3:-55881841 Msa0459390:CDS
CCACGTATGCGCCCCTTGTG+TGG 0.582023 3_3:-55881749 Msa0459390:three_prime_UTR
TGACTATCATGCTATTAGCT+AGG 0.582758 3_3:-55881938 Msa0459390:CDS
GTTTGTTTCCGCTGCTTGTG+TGG 0.583043 3_3:-55881693 Msa0459390:three_prime_UTR
AACCTATGGATGGCCACACA+AGG 0.585337 3_3:+55881736 None:intergenic
CCACACAAGGGGCGCATACG+TGG 0.585822 3_3:+55881749 None:intergenic
GAAATAGCATGTATCCGCCT+AGG 0.585840 3_3:-55885641 Msa0459390:CDS
CTGATTATATCCCATGCTTG+AGG 0.589495 3_3:-55885157 Msa0459390:CDS
GCGAGCGATATCATCTCGAA+TGG 0.591111 3_3:-55885524 Msa0459390:CDS
ATTGCAACACAACATTATTG+TGG 0.594382 3_3:-55885317 Msa0459390:CDS
TTGTATCATTCGTAGAGACA+TGG 0.596582 3_3:+55882180 None:intergenic
GCTATAAACCACACAAGCAG+CGG 0.606500 3_3:+55881685 None:intergenic
GAAAAGGTATGGAGGATGGA+GGG 0.606872 3_3:-55885253 Msa0459390:CDS
ACGATTTGCTCTCTCCACTC+AGG 0.609566 3_3:-55885436 Msa0459390:CDS
CTTAGATGGTCATAAGGGCA+AGG 0.611455 3_3:-55885126 Msa0459390:CDS
TATAACAAATGCAACAATGG+TGG 0.612063 3_3:-55885356 Msa0459390:CDS
GTGGAACCAAGCATAACAGC+AGG 0.618797 3_3:+55881963 None:intergenic
AGTCAAGTAACCTCAAGCAT+GGG 0.619137 3_3:+55885147 None:intergenic
TGGATCGAAGAATGTTGAAG+AGG 0.619341 3_3:-55885030 Msa0459390:CDS
ACCTATGGATGGCCACACAA+GGG 0.621511 3_3:+55881737 None:intergenic
TAATAGCATGATAGTCATTG+TGG 0.626708 3_3:+55881944 None:intergenic
CCTATGGATGGCCACACAAG+GGG 0.627888 3_3:+55881738 None:intergenic
TGAAGCCATTGGTGCCTGAG+TGG 0.635403 3_3:+55885422 None:intergenic
TAATCCATTATTGACAACGA+AGG 0.637761 3_3:-55884967 Msa0459390:CDS
TTGAAGAGAGAATCCAACAA+TGG 0.641759 3_3:-55885058 Msa0459390:CDS
GGAAAAGGTATGGAGGATGG+AGG 0.648489 3_3:-55885254 Msa0459390:CDS
ATGCTGAGAAAGCATAAACA+TGG 0.652394 3_3:+55885180 None:intergenic
TGTCTCTACGAATGATACAA+TGG 0.652872 3_3:-55882177 Msa0459390:CDS
TTGCAATCCTAACATTCACA+AGG 0.678707 3_3:+55885333 None:intergenic
GTACTTCGGAAAAGGTATGG+AGG 0.686267 3_3:-55885261 Msa0459390:CDS
AATCCGTAATGGGATGAAGG+CGG 0.702285 3_3:+55882213 None:intergenic
GTATCATTCGTAGAGACATG+GGG 0.704429 3_3:+55882182 None:intergenic
TCTTGATGAGCCACTGACGG+TGG 0.705829 3_3:-55881838 Msa0459390:CDS
GCCAAAGGGTACAAGAACTG+TGG 0.708644 3_3:+55885493 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.727704 3_3:+55885627 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAGTTACATTTTTTTAT+TGG + chr3_3:55882640-55882659 None:intergenic 10.0%
!! CAATATAAAAAACAAAAAAA+TGG + chr3_3:55883123-55883142 None:intergenic 10.0%
!! TTGAAAAAAAAAATTGAAAA+CGG - chr3_3:55884439-55884458 Msa0459390:intron 10.0%
!!! ATTTTTTTTTAAATTCCATA+TGG + chr3_3:55884585-55884604 None:intergenic 10.0%
!! CATAAAAAATAAAAAAAATC+AGG + chr3_3:55884837-55884856 None:intergenic 10.0%
!!! GATTTTTTTTATTTTTTATG+AGG - chr3_3:55884837-55884856 Msa0459390:intron 10.0%
!!! TTTTTTTTATTTTTTATGAG+GGG - chr3_3:55884839-55884858 Msa0459390:intron 10.0%
!! CAAATAAAACATAAGATTAT+CGG + chr3_3:55882073-55882092 None:intergenic 15.0%
!!! ATTTTCATAGCTATATTTTA+GGG + chr3_3:55883078-55883097 None:intergenic 15.0%
!!! TATTTTCATAGCTATATTTT+AGG + chr3_3:55883079-55883098 None:intergenic 15.0%
!!! TGTTATCTGAAATTTAATTA+AGG - chr3_3:55884465-55884484 Msa0459390:intron 15.0%
!!! GTTATCTGAAATTTAATTAA+GGG - chr3_3:55884466-55884485 Msa0459390:intron 15.0%
!!! AACATACTCTTTTTTTTTTT+TGG + chr3_3:55884653-55884672 None:intergenic 15.0%
!! AAAAACAAAAACAATAAGCA+AGG + chr3_3:55881529-55881548 None:intergenic 20.0%
!! TAGTTGGATATACAAAATAA+TGG - chr3_3:55881771-55881790 Msa0459390:exon 20.0%
!!! TTTTTTAATACAAGGTACTT+CGG - chr3_3:55882174-55882193 Msa0459390:CDS 20.0%
!! GTAACATTTAAACAATTGTT+AGG - chr3_3:55882721-55882740 Msa0459390:intron 20.0%
!!! TGCTTTTTTAAATCTTAGAA+TGG + chr3_3:55882964-55882983 None:intergenic 20.0%
!! TAAAAAAGCAATTGAAAAAG+TGG - chr3_3:55882974-55882993 Msa0459390:intron 20.0%
!!! TTTTTGAATGTTAGTGTAAA+TGG - chr3_3:55883021-55883040 Msa0459390:intron 20.0%
!! GGATAAAACATCATAATAAT+AGG - chr3_3:55883595-55883614 Msa0459390:intron 20.0%
!! TATCTCAAAGAAAAATCAAT+CGG - chr3_3:55883649-55883668 Msa0459390:intron 20.0%
!! GACAAAAGATAAATAATGAA+TGG + chr3_3:55884146-55884165 None:intergenic 20.0%
!! TAACAAAAAACTGAATTGAA+AGG - chr3_3:55884320-55884339 Msa0459390:intron 20.0%
!! CATTAGAAACAAAGAAAAAA+AGG + chr3_3:55884519-55884538 None:intergenic 20.0%
!!! TTTTTTGAATTTAGTCCATA+TGG - chr3_3:55884567-55884586 Msa0459390:intron 20.0%
!!! CAAACTCATGTTTTATTTTA+AGG + chr3_3:55884743-55884762 None:intergenic 20.0%
!! AGTTTGATTCACTAATTAAT+TGG - chr3_3:55884757-55884776 Msa0459390:intron 20.0%
!!! TGTTTTTAGCATTTTTTTCA+AGG - chr3_3:55884891-55884910 Msa0459390:intron 20.0%
!! GAAGAATTAGACAATATAAT+TGG - chr3_3:55885141-55885160 Msa0459390:CDS 20.0%
!! ACAATATAATTGGAAAAGAT+AGG - chr3_3:55885151-55885170 Msa0459390:CDS 20.0%
!!! AGATTGATTCTTGATATATT+GGG + chr3_3:55885567-55885586 None:intergenic 20.0%
!!! AAGATTGATTCTTGATATAT+TGG + chr3_3:55885568-55885587 None:intergenic 20.0%
!! TAGAAAAATACAAAGACAAA+GGG + chr3_3:55885818-55885837 None:intergenic 20.0%
!! ATAGAAAAATACAAAGACAA+AGG + chr3_3:55885819-55885838 None:intergenic 20.0%
!!! TTGTCTTTGTATTTTTCTAT+TGG - chr3_3:55885819-55885838 Msa0459390:CDS 20.0%
!! TTCTGAGTAAAAAAAAACTA+AGG - chr3_3:55885866-55885885 Msa0459390:CDS 20.0%
!!! TAAAAAAAAACTAAGGCATT+CGG - chr3_3:55885873-55885892 Msa0459390:CDS 20.0%
! TATGAGTGTAATTCATAGTT+TGG + chr3_3:55881564-55881583 None:intergenic 25.0%
! AAACTATGAATTACACTCAT+AGG - chr3_3:55881563-55881582 Msa0459390:three_prime_UTR 25.0%
! AAAAACATTACAAGGAAAAG+AGG + chr3_3:55881619-55881638 None:intergenic 25.0%
!! CTTTTCCTTGTAATGTTTTT+TGG - chr3_3:55881619-55881638 Msa0459390:three_prime_UTR 25.0%
!!! TTAAGGTTTTGATTACCATA+TGG + chr3_3:55881645-55881664 None:intergenic 25.0%
! TTATAGGATTCTCATTTAAG+TGG + chr3_3:55881672-55881691 None:intergenic 25.0%
!! ATGTTTTCTCAAGAATTCAT+GGG + chr3_3:55881872-55881891 None:intergenic 25.0%
! TTGTATAACAAATGCAACAA+TGG - chr3_3:55882090-55882109 Msa0459390:CDS 25.0%
!! ATTATTGTGGTAATGTGTTT+AGG - chr3_3:55882145-55882164 Msa0459390:CDS 25.0%
!!! GGAAACTGTTTTTTAATACA+AGG - chr3_3:55882166-55882185 Msa0459390:CDS 25.0%
! CTAAAACTATTTAGTAACAC+AGG + chr3_3:55882752-55882771 None:intergenic 25.0%
!! GAATTTTACTATCCTAATCT+TGG + chr3_3:55882903-55882922 None:intergenic 25.0%
!!! ATTTGTTTTGTACTTAGACT+CGG + chr3_3:55883162-55883181 None:intergenic 25.0%
!!! TTTGTTGTTTGTGTTTTAAC+GGG + chr3_3:55883213-55883232 None:intergenic 25.0%
!!! CTTTGTTGTTTGTGTTTTAA+CGG + chr3_3:55883214-55883233 None:intergenic 25.0%
! CAAAATGCATTGTATATAGA+TGG - chr3_3:55883234-55883253 Msa0459390:intron 25.0%
!!! TTAGTTTTGATTGATTTTGG+TGG + chr3_3:55883319-55883338 None:intergenic 25.0%
!!! AGTTTGGAATAAGAGATTTT+CGG + chr3_3:55883538-55883557 None:intergenic 25.0%
!! TATTATGATGTTTTATCCAG+TGG + chr3_3:55883593-55883612 None:intergenic 25.0%
!! GATTCTAGACTTAAGTTTTT+GGG + chr3_3:55883621-55883640 None:intergenic 25.0%
!! AGATTCTAGACTTAAGTTTT+TGG + chr3_3:55883622-55883641 None:intergenic 25.0%
!!! TGTCTAATTGCAAGTTTTTT+GGG + chr3_3:55883749-55883768 None:intergenic 25.0%
! ATCGATATTATTTCGAAATC+AGG + chr3_3:55883778-55883797 None:intergenic 25.0%
! GATTTCGAAATAATATCGAT+CGG - chr3_3:55883778-55883797 Msa0459390:intron 25.0%
!!! ATTTGGTTTTTGAATTCTAG+AGG + chr3_3:55883804-55883823 None:intergenic 25.0%
! AACTAAAGCCTTAACATAAA+TGG - chr3_3:55883992-55884011 Msa0459390:intron 25.0%
! TATGCTATCCATTTATGTTA+AGG + chr3_3:55884003-55884022 None:intergenic 25.0%
! TGAAAATGAAAAGAGTGATA+GGG + chr3_3:55884087-55884106 None:intergenic 25.0%
!! CTTTTCATTTTCACAAAGTA+TGG - chr3_3:55884094-55884113 Msa0459390:intron 25.0%
! GAATGACCAACTTATTTATT+TGG - chr3_3:55884279-55884298 Msa0459390:intron 25.0%
! GTGAATCCAAATAAATAAGT+TGG + chr3_3:55884288-55884307 None:intergenic 25.0%
! AAAGATATGAACTTCAATTC+TGG + chr3_3:55885444-55885463 None:intergenic 25.0%
!! AAGTTCATATCTTTTAGTAC+AGG - chr3_3:55885450-55885469 Msa0459390:CDS 25.0%
TATGGCCAAAAAACATTACA+AGG + chr3_3:55881627-55881646 None:intergenic 30.0%
!!! TGTAATGTTTTTTGGCCATA+TGG - chr3_3:55881627-55881646 Msa0459390:three_prime_UTR 30.0%
CTCATTTAAGTGGTATCTTA+AGG + chr3_3:55881662-55881681 None:intergenic 30.0%
TCAAGAAGATTACCAACTAT+AGG + chr3_3:55881727-55881746 None:intergenic 30.0%
TTGTATATCCAACTAGTTGT+AGG + chr3_3:55881766-55881785 None:intergenic 30.0%
GACAAATAATAGGGATAACA+TGG + chr3_3:55881840-55881859 None:intergenic 30.0%
CAATTGTGGGACAAATAATA+GGG + chr3_3:55881849-55881868 None:intergenic 30.0%
! CATGTTTTCTCAAGAATTCA+TGG + chr3_3:55881873-55881892 None:intergenic 30.0%
!!! ATGATGTTGATTTTGCATCA+AGG - chr3_3:55881890-55881909 Msa0459390:CDS 30.0%
TATAACAAATGCAACAATGG+TGG - chr3_3:55882093-55882112 Msa0459390:CDS 30.0%
ATTGCAACACAACATTATTG+TGG - chr3_3:55882132-55882151 Msa0459390:CDS 30.0%
TTGGATTCTCTCTTCAATAA+GGG + chr3_3:55882388-55882407 None:intergenic 30.0%
TAATCCATTATTGACAACGA+AGG - chr3_3:55882482-55882501 Msa0459390:intron 30.0%
ATTTCCTTCGTTGTCAATAA+TGG + chr3_3:55882489-55882508 None:intergenic 30.0%
CATTGACGTATTGTTTGTAA+TGG + chr3_3:55882595-55882614 None:intergenic 30.0%
!!! TTGTTGTTTGTGTTTTAACG+GGG + chr3_3:55883212-55883231 None:intergenic 30.0%
! CGAGATGTATGAAATTCTTT+TGG + chr3_3:55883266-55883285 None:intergenic 30.0%
!!! CGGTTAGTTTTGATTGATTT+TGG + chr3_3:55883322-55883341 None:intergenic 30.0%
!!! AGGTTTGATTATGGTTTTAG+CGG + chr3_3:55883342-55883361 None:intergenic 30.0%
! AAAGGTGTGATGATGTTATA+GGG + chr3_3:55883486-55883505 None:intergenic 30.0%
! AAAAGGTGTGATGATGTTAT+AGG + chr3_3:55883487-55883506 None:intergenic 30.0%
!!! AGATTTTCGGGTTTTTACTT+GGG + chr3_3:55883525-55883544 None:intergenic 30.0%
!! GTTTGGAATAAGAGATTTTC+GGG + chr3_3:55883537-55883556 None:intergenic 30.0%
TCTCTTATTCCAAACTCATT+CGG - chr3_3:55883542-55883561 Msa0459390:intron 30.0%
ACTCCTAAAACAAATCACTA+AGG - chr3_3:55883680-55883699 Msa0459390:intron 30.0%
!!! GTGTCTAATTGCAAGTTTTT+TGG + chr3_3:55883750-55883769 None:intergenic 30.0%
! TGTTGACTGTCTTAATGATT+TGG + chr3_3:55883821-55883840 None:intergenic 30.0%
! TGATTTTCTTCTGATTCCTA+CGG + chr3_3:55883972-55883991 None:intergenic 30.0%
!! GTCGGTGTTGTTAATTATTT+GGG + chr3_3:55884042-55884061 None:intergenic 30.0%
!! TGTCGGTGTTGTTAATTATT+TGG + chr3_3:55884043-55884062 None:intergenic 30.0%
GTGAAAATGAAAAGAGTGAT+AGG + chr3_3:55884088-55884107 None:intergenic 30.0%
!! GTCTTTCTCTAAAATAACAC+AGG - chr3_3:55884163-55884182 Msa0459390:intron 30.0%
TTGTTGTCGGTAATATGTTA+AGG + chr3_3:55884207-55884226 None:intergenic 30.0%
!! TAAGTTGGTCATTCTAATAG+TGG + chr3_3:55884273-55884292 None:intergenic 30.0%
! AATATCGTATCCTTTTCATG+GGG + chr3_3:55884393-55884412 None:intergenic 30.0%
! CAATATCGTATCCTTTTCAT+GGG + chr3_3:55884394-55884413 None:intergenic 30.0%
! TCAATATCGTATCCTTTTCA+TGG + chr3_3:55884395-55884414 None:intergenic 30.0%
! CACGCTTTTAAATTTTGTGT+AGG - chr3_3:55884797-55884816 Msa0459390:intron 30.0%
!!! GTTGCTTTTTCAAAAAGTTC+TGG + chr3_3:55885120-55885139 None:intergenic 30.0%
GTTTAGGAATATCTGATTCT+TGG + chr3_3:55885182-55885201 None:intergenic 30.0%
TGGAAATTACTTCATACCAA+AGG - chr3_3:55885296-55885315 Msa0459390:CDS 30.0%
GGAAATTACTTCATACCAAA+GGG - chr3_3:55885297-55885316 Msa0459390:CDS 30.0%
AACGTCATCTTAAGAATGAT+GGG - chr3_3:55885397-55885416 Msa0459390:CDS 30.0%
TAATAGCATGATAGTCATTG+TGG + chr3_3:55885508-55885527 None:intergenic 30.0%
!! ATCAATCTTTTCGATTCGAA+TGG - chr3_3:55885579-55885598 Msa0459390:CDS 30.0%
ACAACACCTTAATAAACCTA+TGG + chr3_3:55885730-55885749 None:intergenic 30.0%
TCAAATTCACTTCTGATTGA+AGG - chr3_3:55885920-55885939 Msa0459390:five_prime_UTR 30.0%
TGTGCTTAATTGATTGAGCT+TGG + chr3_3:55881493-55881512 None:intergenic 35.0%
AAACAATAAGCAAGGCTCAA+AGG + chr3_3:55881521-55881540 None:intergenic 35.0%
! AGGAATGATGGAGTAATCTA+AGG + chr3_3:55881591-55881610 None:intergenic 35.0%
! GATTACTCCATCATTCCTTT+TGG - chr3_3:55881593-55881612 Msa0459390:three_prime_UTR 35.0%
CCAACTAGTTGTAGGTTTAT+TGG + chr3_3:55881758-55881777 None:intergenic 35.0%
CCAATAAACCTACAACTAGT+TGG - chr3_3:55881755-55881774 Msa0459390:three_prime_UTR 35.0%
GCAATTGTGGGACAAATAAT+AGG + chr3_3:55881850-55881869 None:intergenic 35.0%
AAGAATTCATGGGCAATTGT+GGG + chr3_3:55881862-55881881 None:intergenic 35.0%
! TTTTTCCATTGTTCGCCAAA+GGG + chr3_3:55881973-55881992 None:intergenic 35.0%
TTGCAATCCTAACATTCACA+AGG + chr3_3:55882119-55882138 None:intergenic 35.0%
! AATACAAGGTACTTCGGAAA+AGG - chr3_3:55882180-55882199 Msa0459390:CDS 35.0%
! ATGCTGAGAAAGCATAAACA+TGG + chr3_3:55882272-55882291 None:intergenic 35.0%
TTGAGGTTACTTGACTTAGA+TGG - chr3_3:55882309-55882328 Msa0459390:CDS 35.0%
ACTTGACTTAGATGGTCATA+AGG - chr3_3:55882317-55882336 Msa0459390:CDS 35.0%
CTTGACTTAGATGGTCATAA+GGG - chr3_3:55882318-55882337 Msa0459390:CDS 35.0%
GTTGGATTCTCTCTTCAATA+AGG + chr3_3:55882389-55882408 None:intergenic 35.0%
TTGAAGAGAGAATCCAACAA+TGG - chr3_3:55882391-55882410 Msa0459390:CDS 35.0%
AGAATCCAACAATGGAATGA+TGG - chr3_3:55882399-55882418 Msa0459390:CDS 35.0%
ATTGACAACGAAGGAAATCA+AGG - chr3_3:55882491-55882510 Msa0459390:intron 35.0%
GACGTATTGTTTGTAATGGT+AGG + chr3_3:55882591-55882610 None:intergenic 35.0%
!! ACTATCCTAATCTTGGCTTT+TGG + chr3_3:55882896-55882915 None:intergenic 35.0%
! TTAGGGTTGCAAACTTGTTT+AGG + chr3_3:55883061-55883080 None:intergenic 35.0%
!!! GTCTCTATTTGTTTTGTACG+GGG + chr3_3:55883190-55883209 None:intergenic 35.0%
!!! GGTCTCTATTTGTTTTGTAC+GGG + chr3_3:55883169-55883188 None:intergenic 35.0%
!!! GGGTCTCTATTTGTTTTGTA+CGG + chr3_3:55883170-55883189 None:intergenic 35.0%
GAGGATATTGCTCATTATGT+GGG + chr3_3:55883369-55883388 None:intergenic 35.0%
TGAGGATATTGCTCATTATG+TGG + chr3_3:55883370-55883389 None:intergenic 35.0%
! AAGGTGTGATGATGTTATAG+GGG + chr3_3:55883485-55883504 None:intergenic 35.0%
!!! GAGATTTTCGGGTTTTTACT+TGG + chr3_3:55883526-55883545 None:intergenic 35.0%
!!! AGTGATTTGTTTTAGGAGTC+TGG + chr3_3:55883679-55883698 None:intergenic 35.0%
!!! GTGCCTTAGTGATTTGTTTT+AGG + chr3_3:55883686-55883705 None:intergenic 35.0%
! GTTATGGTGTCTTTTCTGAT+AGG + chr3_3:55883723-55883742 None:intergenic 35.0%
!!! TAATTGCAAGTTTTTTGGGC+TGG + chr3_3:55883745-55883764 None:intergenic 35.0%
AAAACAACCCAAATCAAACC+AGG - chr3_3:55883873-55883892 Msa0459390:intron 35.0%
CCAAAATCAACAAGAGCTAA+CGG - chr3_3:55883913-55883932 Msa0459390:intron 35.0%
AAAAGAGTGATAGGGACTAT+GGG + chr3_3:55884079-55884098 None:intergenic 35.0%
TTCTACGCAGGAATTGATAA+TGG - chr3_3:55885035-55885054 Msa0459390:CDS 35.0%
AAACGCAGTTGAATGGATAT+TGG - chr3_3:55885077-55885096 Msa0459390:CDS 35.0%
TCCTAAACTCAACTTCTTGA+AGG - chr3_3:55885194-55885213 Msa0459390:CDS 35.0%
GGAACATTGAAATCCGTAAT+GGG + chr3_3:55885249-55885268 None:intergenic 35.0%
TGTATCATTCGTAGAGACAT+GGG + chr3_3:55885271-55885290 None:intergenic 35.0%
TTGTATCATTCGTAGAGACA+TGG + chr3_3:55885272-55885291 None:intergenic 35.0%
TGTCTCTACGAATGATACAA+TGG - chr3_3:55885272-55885291 Msa0459390:CDS 35.0%
TCTACGAATGATACAATGGT+TGG - chr3_3:55885276-55885295 Msa0459390:CDS 35.0%
TTGGGAGAAATCCAAAAGTT+TGG - chr3_3:55885349-55885368 Msa0459390:CDS 35.0%
! TAAGGTTCAGTCCAAACTTT+TGG + chr3_3:55885363-55885382 None:intergenic 35.0%
!! CGTTCTGGTTTGAATTTGTA+AGG + chr3_3:55885381-55885400 None:intergenic 35.0%
TCATTCTTAAGATGACGTTC+TGG + chr3_3:55885396-55885415 None:intergenic 35.0%
GAACGTCATCTTAAGAATGA+TGG - chr3_3:55885396-55885415 Msa0459390:CDS 35.0%
! TCTTTTAGTACAGGAAAACG+TGG - chr3_3:55885459-55885478 Msa0459390:CDS 35.0%
TGACTATCATGCTATTAGCT+AGG - chr3_3:55885511-55885530 Msa0459390:CDS 35.0%
CACCTTAATAAACCTATGGA+TGG + chr3_3:55885726-55885745 None:intergenic 35.0%
! TTCTGATTGAAGGATTTGCT+CGG - chr3_3:55885930-55885949 Msa0459390:five_prime_UTR 35.0%
AAAGAGGCCAAAAGGAATGA+TGG + chr3_3:55881603-55881622 None:intergenic 40.0%
TACAAGGAAAAGAGGCCAAA+AGG + chr3_3:55881611-55881630 None:intergenic 40.0%
! GGGGGAAGTTTACGTTTTAT+AGG + chr3_3:55881688-55881707 None:intergenic 40.0%
ATAAAACGTAAACTTCCCCC+CGG - chr3_3:55881688-55881707 Msa0459390:three_prime_UTR 40.0%
AGATTACCAACTATAGGCCA+TGG + chr3_3:55881721-55881740 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_3:55881825-55881844 None:intergenic 40.0%
GGATAACATGGACATTTCCT+AGG + chr3_3:55881828-55881847 None:intergenic 40.0%
CAAGAATTCATGGGCAATTG+TGG + chr3_3:55881863-55881882 None:intergenic 40.0%
! CTTTTTCCATTGTTCGCCAA+AGG + chr3_3:55881974-55881993 None:intergenic 40.0%
ACCAATGGCTTCAACACAAA+AGG - chr3_3:55882037-55882056 Msa0459390:CDS 40.0%
! TCCTTTTGTGTTGAAGCCAT+TGG + chr3_3:55882041-55882060 None:intergenic 40.0%
! AAGGTACTTCGGAAAAGGTA+TGG - chr3_3:55882185-55882204 Msa0459390:CDS 40.0%
CTGATTATATCCCATGCTTG+AGG - chr3_3:55882292-55882311 Msa0459390:CDS 40.0%
AGTCAAGTAACCTCAAGCAT+GGG + chr3_3:55882305-55882324 None:intergenic 40.0%
AAGTCAAGTAACCTCAAGCA+TGG + chr3_3:55882306-55882325 None:intergenic 40.0%
! GCAAGGTAAAAAGTGCAATG+AGG - chr3_3:55882340-55882359 Msa0459390:CDS 40.0%
TCGATCCATCATTCCATTGT+TGG + chr3_3:55882407-55882426 None:intergenic 40.0%
TGGATCGAAGAATGTTGAAG+AGG - chr3_3:55882419-55882438 Msa0459390:intron 40.0%
!! CCTAATCTTGGCTTTTGGTT+AGG + chr3_3:55882891-55882910 None:intergenic 40.0%
CCTAACCAAAAGCCAAGATT+AGG - chr3_3:55882888-55882907 Msa0459390:intron 40.0%
GTGGGAGTTAGGTTTGATTA+TGG + chr3_3:55883351-55883370 None:intergenic 40.0%
TTGCTCATTATGTGGGAGTT+AGG + chr3_3:55883362-55883381 None:intergenic 40.0%
ATCATTTGCGATGTAGCATG+AGG + chr3_3:55883388-55883407 None:intergenic 40.0%
!!! TGGTCGGTTTGATGGTTTTT+GGG + chr3_3:55883461-55883480 None:intergenic 40.0%
GGCTCAATTGTGTGAAGAAA+AGG + chr3_3:55883504-55883523 None:intergenic 40.0%
!!! GATTTGTTTTAGGAGTCTGG+TGG + chr3_3:55883676-55883695 None:intergenic 40.0%
!!! CAAGTTTTTTGGGCTGGTTA+TGG + chr3_3:55883739-55883758 None:intergenic 40.0%
!!! GATTTGGGTTGTTTTTGAGC+TGG + chr3_3:55883868-55883887 None:intergenic 40.0%
! ATTGGCTCCTGGTTTGATTT+GGG + chr3_3:55883883-55883902 None:intergenic 40.0%
! GATTTTGGACCGTTTTCGAT+TGG + chr3_3:55883901-55883920 None:intergenic 40.0%
!!! CCGTTAGCTCTTGTTGATTT+TGG + chr3_3:55883916-55883935 None:intergenic 40.0%
TTTCTTCTGATTCCTACGGA+TGG + chr3_3:55883968-55883987 None:intergenic 40.0%
!! TGGGTGTTAATTTGGGTTGT+CGG + chr3_3:55884060-55884079 None:intergenic 40.0%
GGGACTATGGGTGTTAATTT+GGG + chr3_3:55884067-55884086 None:intergenic 40.0%
AGGGACTATGGGTGTTAATT+TGG + chr3_3:55884068-55884087 None:intergenic 40.0%
GAAAAGAGTGATAGGGACTA+TGG + chr3_3:55884080-55884099 None:intergenic 40.0%
AACGTGCATACTGTTGTTGT+CGG + chr3_3:55884220-55884239 None:intergenic 40.0%
ATTAGACGAACCCCATGAAA+AGG - chr3_3:55884380-55884399 Msa0459390:intron 40.0%
TTTCTCAACACCATGCATGT+TGG + chr3_3:55884702-55884721 None:intergenic 40.0%
! ATGCATGGTGTTGAGAAAAC+TGG - chr3_3:55884704-55884723 Msa0459390:intron 40.0%
ATCCATCAAACGCAGTTGAA+TGG - chr3_3:55885070-55885089 Msa0459390:CDS 40.0%
ATCCATTCAACTGCGTTTGA+TGG + chr3_3:55885075-55885094 None:intergenic 40.0%
GCCTTCAAGAAGTTGAGTTT+AGG + chr3_3:55885198-55885217 None:intergenic 40.0%
! TGAAATCCGTAATGGGATGA+AGG + chr3_3:55885242-55885261 None:intergenic 40.0%
GGGAACATTGAAATCCGTAA+TGG + chr3_3:55885250-55885269 None:intergenic 40.0%
GTATCATTCGTAGAGACATG+GGG + chr3_3:55885270-55885289 None:intergenic 40.0%
TGCTTGGAAGAAGTGGTATT+GGG - chr3_3:55885331-55885350 Msa0459390:CDS 40.0%
CTATTAGCTAGGTTACTCCA+TGG - chr3_3:55885522-55885541 Msa0459390:CDS 40.0%
TACAATTCTCCTGCTAATCG+TGG + chr3_3:55885645-55885664 None:intergenic 40.0%
GGCCATCCATAGGTTTATTA+AGG - chr3_3:55885721-55885740 Msa0459390:CDS 40.0%
! ACTAAGGCATTCGGTAAAAG+AGG - chr3_3:55885882-55885901 Msa0459390:CDS 40.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_3:55881715-55881734 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_3:55881716-55881735 None:intergenic 45.0%
GAAATAGCATGTATCCGCCT+AGG - chr3_3:55881808-55881827 Msa0459390:CDS 45.0%
ATATCGCTCGCCATGCATAT+CGG + chr3_3:55881916-55881935 None:intergenic 45.0%
ACCACAGTTCTTGTACCCTT+TGG - chr3_3:55881955-55881974 Msa0459390:CDS 45.0%
TTGTACCCTTTGGCGAACAA+TGG - chr3_3:55881965-55881984 Msa0459390:CDS 45.0%
!! ATGGTGGCCTTGTGAATGTT+AGG - chr3_3:55882109-55882128 Msa0459390:CDS 45.0%
! GTACTTCGGAAAAGGTATGG+AGG - chr3_3:55882188-55882207 Msa0459390:CDS 45.0%
! TTCGGAAAAGGTATGGAGGA+TGG - chr3_3:55882192-55882211 Msa0459390:CDS 45.0%
! GAAAAGGTATGGAGGATGGA+GGG - chr3_3:55882196-55882215 Msa0459390:CDS 45.0%
TGCTCAATTTCCTCAAGACC+TGG + chr3_3:55882222-55882241 None:intergenic 45.0%
CTTAGATGGTCATAAGGGCA+AGG - chr3_3:55882323-55882342 Msa0459390:CDS 45.0%
!!! AGGGTTTTGTTACGAGTAGC+AGG + chr3_3:55883438-55883457 None:intergenic 45.0%
!! CGGTTTGATGGTTTTTGGGA+GGG + chr3_3:55883457-55883476 None:intergenic 45.0%
!! TCGGTTTGATGGTTTTTGGG+AGG + chr3_3:55883458-55883477 None:intergenic 45.0%
!!! CTGGTCGGTTTGATGGTTTT+TGG + chr3_3:55883462-55883481 None:intergenic 45.0%
! ATGATGTTATAGGGGCTGGT+CGG + chr3_3:55883477-55883496 None:intergenic 45.0%
! TGTGATGATGTTATAGGGGC+TGG + chr3_3:55883481-55883500 None:intergenic 45.0%
TGGTGGAATCCGAATGAGTT+TGG + chr3_3:55883554-55883573 None:intergenic 45.0%
TCTGATAGGCCGAGAGTTTA+GGG + chr3_3:55883709-55883728 None:intergenic 45.0%
TTCTGATAGGCCGAGAGTTT+AGG + chr3_3:55883710-55883729 None:intergenic 45.0%
ACAGTCAACAGATGATGCGA+TGG - chr3_3:55883831-55883850 Msa0459390:intron 45.0%
! GATTGGCTCCTGGTTTGATT+TGG + chr3_3:55883884-55883903 None:intergenic 45.0%
AACCAGGAGCCAATCGAAAA+CGG - chr3_3:55883889-55883908 Msa0459390:intron 45.0%
TAGAGGTGGACCCAAACTAA+AGG - chr3_3:55883939-55883958 Msa0459390:intron 45.0%
! CGGATGGTGACCTTTAGTTT+GGG + chr3_3:55883952-55883971 None:intergenic 45.0%
ACGGATGGTGACCTTTAGTT+TGG + chr3_3:55883953-55883972 None:intergenic 45.0%
AACTAAAGGTCACCATCCGT+AGG - chr3_3:55883953-55883972 Msa0459390:intron 45.0%
ACAGAAGAGACCAACATGCA+TGG - chr3_3:55884689-55884708 Msa0459390:intron 45.0%
CTCGTTGTAAACTTCTACGC+AGG - chr3_3:55885023-55885042 Msa0459390:CDS 45.0%
TTTCCGCCTTCATCCCATTA+CGG - chr3_3:55885233-55885252 Msa0459390:CDS 45.0%
! AATCCGTAATGGGATGAAGG+CGG + chr3_3:55885239-55885258 None:intergenic 45.0%
AGCAGTACATGACTTCCCTT+TGG + chr3_3:55885315-55885334 None:intergenic 45.0%
AAGGGAAGTCATGTACTGCT+TGG - chr3_3:55885315-55885334 Msa0459390:CDS 45.0%
CATGTACTGCTTGGAAGAAG+TGG - chr3_3:55885324-55885343 Msa0459390:CDS 45.0%
CTGCTTGGAAGAAGTGGTAT+TGG - chr3_3:55885330-55885349 Msa0459390:CDS 45.0%
ATCTCTTGATGAGCCACTGA+CGG - chr3_3:55885608-55885627 Msa0459390:CDS 45.0%
GCTATAAACCACACAAGCAG+CGG + chr3_3:55885767-55885786 None:intergenic 45.0%
!! AGACAAAGGGTGTCGTACAT+AGG + chr3_3:55885805-55885824 None:intergenic 45.0%
!!! ATTTTTTTTATTTTTTATGA+GGG - chr3_3:55884838-55884857 Msa0459390:intron 5.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_3:55881710-55881729 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_3:55881712-55881731 Msa0459390:three_prime_UTR 50.0%
TGCATCAAGGCCGATATGCA+TGG - chr3_3:55881903-55881922 Msa0459390:CDS 50.0%
GCGAGCGATATCATCTCGAA+TGG - chr3_3:55881925-55881944 Msa0459390:CDS 50.0%
! GCCAAAGGGTACAAGAACTG+TGG + chr3_3:55881959-55881978 None:intergenic 50.0%
! ACGATTTGCTCTCTCCACTC+AGG - chr3_3:55882013-55882032 Msa0459390:CDS 50.0%
! GGAAAAGGTATGGAGGATGG+AGG - chr3_3:55882195-55882214 Msa0459390:CDS 50.0%
AGTAGCAGGCGATAGGTGTT+TGG + chr3_3:55883424-55883443 None:intergenic 50.0%
TGTTACGAGTAGCAGGCGAT+AGG + chr3_3:55883431-55883450 None:intergenic 50.0%
! CTAAGGCACCCCTAAACTCT+CGG - chr3_3:55883697-55883716 Msa0459390:intron 50.0%
CTGATAGGCCGAGAGTTTAG+GGG + chr3_3:55883708-55883727 None:intergenic 50.0%
GATGATGCGATGGCGCAATT+TGG - chr3_3:55883841-55883860 Msa0459390:intron 50.0%
ACAAGAGCTAACGGCAGTAG+AGG - chr3_3:55883922-55883941 Msa0459390:intron 50.0%
GGTTGTCCTGCTGTTATGCT+TGG - chr3_3:55885480-55885499 Msa0459390:CDS 50.0%
GTGGAACCAAGCATAACAGC+AGG + chr3_3:55885489-55885508 None:intergenic 50.0%
GGTTACTCCATGGCTTCACT+TGG - chr3_3:55885532-55885551 Msa0459390:CDS 50.0%
ACCTATGGATGGCCACACAA+GGG + chr3_3:55885715-55885734 None:intergenic 50.0%
AACCTATGGATGGCCACACA+AGG + chr3_3:55885716-55885735 None:intergenic 50.0%
GTTTGTTTCCGCTGCTTGTG+TGG - chr3_3:55885756-55885775 Msa0459390:CDS 50.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_3:55881709-55881728 None:intergenic 55.0%
TCTCTCCACTCAGGCACCAA+TGG - chr3_3:55882022-55882041 Msa0459390:CDS 55.0%
! TGAAGCCATTGGTGCCTGAG+TGG + chr3_3:55882030-55882049 None:intergenic 55.0%
!! ATAGGGGCTGGTCGGTTTGA+TGG + chr3_3:55883469-55883488 None:intergenic 55.0%
GACGAGAGTGAGATTGGTGG+TGG + chr3_3:55883571-55883590 None:intergenic 55.0%
GTGGACGAGAGTGAGATTGG+TGG + chr3_3:55883574-55883593 None:intergenic 55.0%
CCAGTGGACGAGAGTGAGAT+TGG + chr3_3:55883577-55883596 None:intergenic 55.0%
CCAATCTCACTCTCGTCCAC+TGG - chr3_3:55883574-55883593 Msa0459390:intron 55.0%
!! GACCGTTTTCGATTGGCTCC+TGG + chr3_3:55883894-55883913 None:intergenic 55.0%
AGAGCTAACGGCAGTAGAGG+TGG - chr3_3:55883925-55883944 Msa0459390:intron 55.0%
GTGCACTCCAAGTGAAGCCA+TGG + chr3_3:55885542-55885561 None:intergenic 55.0%
TCTTGATGAGCCACTGACGG+TGG - chr3_3:55885611-55885630 Msa0459390:CDS 55.0%
GCAGCAAAGCCACGATTAGC+AGG - chr3_3:55885633-55885652 Msa0459390:CDS 55.0%
CCTATGGATGGCCACACAAG+GGG + chr3_3:55885714-55885733 None:intergenic 55.0%
! TAGGCCATGGTTTGGGACCG+GGG + chr3_3:55881708-55881727 None:intergenic 60.0%
CCCCTTGTGTGGCCATCCAT+AGG - chr3_3:55885711-55885730 Msa0459390:CDS 60.0%
TTCCCCCCGGTCCCAAACCA+TGG - chr3_3:55881701-55881720 Msa0459390:three_prime_UTR 65.0%
! AGGCCATGGTTTGGGACCGG+GGG + chr3_3:55881707-55881726 None:intergenic 65.0%
GGTATGGAGGATGGAGGGCC+AGG - chr3_3:55882201-55882220 Msa0459390:CDS 65.0%
GGATGGAGGGCCAGGTCTTG+AGG - chr3_3:55882209-55882228 Msa0459390:CDS 65.0%
GGCTTTGCTGCCACCGTCAG+TGG + chr3_3:55885624-55885643 None:intergenic 65.0%
! CCACACAAGGGGCGCATACG+TGG + chr3_3:55885703-55885722 None:intergenic 65.0%
CCACGTATGCGCCCCTTGTG+TGG - chr3_3:55885700-55885719 Msa0459390:CDS 65.0%
! GGCCATGGTTTGGGACCGGG+GGG + chr3_3:55881706-55881725 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 55881488 55885983 55881488 ID=Msa0459390;Name=Msa0459390
chr3_3 mRNA 55881488 55885983 55881488 ID=Msa0459390-mRNA-1;Parent=Msa0459390;Name=Msa0459390-mRNA-1;_AED=0.22;_eAED=0.22;_QI=65|1|1|1|1|1|2|300|536
chr3_3 exon 55881488 55882426 55881488 ID=Msa0459390-mRNA-1:exon:11093;Parent=Msa0459390-mRNA-1
chr3_3 exon 55884947 55885983 55884947 ID=Msa0459390-mRNA-1:exon:11092;Parent=Msa0459390-mRNA-1
chr3_3 five_prime_UTR 55885919 55885983 55885919 ID=Msa0459390-mRNA-1:five_prime_utr;Parent=Msa0459390-mRNA-1
chr3_3 CDS 55884947 55885918 55884947 ID=Msa0459390-mRNA-1:cds;Parent=Msa0459390-mRNA-1
chr3_3 CDS 55881788 55882426 55881788 ID=Msa0459390-mRNA-1:cds;Parent=Msa0459390-mRNA-1
chr3_3 three_prime_UTR 55881488 55881787 55881488 ID=Msa0459390-mRNA-1:three_prime_utr;Parent=Msa0459390-mRNA-1
Gene Sequence

>Msa0459390

ATGTTTTTCCAAACTATGAATTACACTCATAGGTTCCTTAGATTACTCCATCATTCCTTTTGGCCTCTTTTCCTTGTAATGTTTTTTGGCCATATGGTAATCAAAACCTTAAGATACCACTTAAATGAGAATCCTATAAAACGTAAACTTCCCCCCGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCTTGAAATGCTTTCCAATAAACCTACAACTAGTTGGATATACAAAATAATGGAAGAAATGAACACAGAAATAGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCTATTATTTGTCCCACAATTGCCCATGAATTCTTGAGAAAACATGATGTTGATTTTGCATCAAGGCCGATATGCATGGCGAGCGATATCATCTCGAATGGATACTTGACCACAGTTCTTGTACCCTTTGGCGAACAATGGAAAAAGATGAAGAAAATAATTGCTAACGATTTGCTCTCTCCACTCAGGCACCAATGGCTTCAACACAAAAGGAACGAAGAAGCCGATAATCTTATGTTTTATTTGTATAACAAATGCAACAATGGTGGCCTTGTGAATGTTAGGATTGCAACACAACATTATTGTGGTAATGTGTTTAGGAAACTGTTTTTTAATACAAGGTACTTCGGAAAAGGTATGGAGGATGGAGGGCCAGGTCTTGAGGAAATTGAGCATGTTGATGCTGTTTTCACATTGCTTAACCATGTTTATGCTTTCTCAGCATCTGATTATATCCCATGCTTGAGGTTACTTGACTTAGATGGTCATAAGGGCAAGGTAAAAAGTGCAATGAGGATAATGAACAACTATCATGATTCCCTTATTGAAGAGAGAATCCAACAATGGAATGATGGATCGAAGAATGTTGAAGAGGATTTGCTAGATGTTTTGATCTCGTTGAAAGATGTCGATAATAATCCATTATTGACAACGAAGGAAATCAAGGCACAAGTTATTGAATTGATAATGGCAACGATAGACAATCCATCAAACGCAGTTGAATGGATATTGGCTGAGATGTTAATTCAACCAGAACTTTTTGAAAAAGCAACAGAAGAATTAGACAATATAATTGGAAAAGATAGGCTTGTCCAAGAATCAGATATTCCTAAACTCAACTTCTTGAAGGCTTGTGCAAGAGAAGCTTTCCGCCTTCATCCCATTACGGATTTCAATGTTCCCCATGTCTCTACGAATGATACAATGGTTGGAAATTACTTCATACCAAAGGGAAGTCATGTACTGCTTGGAAGAAGTGGTATTGGGAGAAATCCAAAAGTTTGGACTGAACCTTACAAATTCAAACCAGAACGTCATCTTAAGAATGATGGGTCAGATATAGCGTTGACAGAGCCAGAATTGAAGTTCATATCTTTTAGTACAGGAAAACGTGGTTGTCCTGCTGTTATGCTTGGTTCCACAATGACTATCATGCTATTAGCTAGGTTACTCCATGGCTTCACTTGGAGTGCACATCCCAATATATCAAGAATCAATCTTTTCGATTCGAATGGTGTTATATCTCTTGATGAGCCACTGACGGTGGCAGCAAAGCCACGATTAGCAGGAGAATTGTACAACTTTTCATGTAAGTGA
Protein sequence

>Msa0459390

MFFQTMNYTHRFLRLLHHSFWPLFLVMFFGHMVIKTLRYHLNENPIKRKLPPGPKPWPIVGNLLEMLSNKPTTSWIYKIMEEMNTEIACIRLGNVHVIPIICPTIAHEFLRKHDVDFASRPICMASDIISNGYLTTVLVPFGEQWKKMKKIIANDLLSPLRHQWLQHKRNEEADNLMFYLYNKCNNGGLVNVRIATQHYCGNVFRKLFFNTRYFGKGMEDGGPGLEEIEHVDAVFTLLNHVYAFSASDYIPCLRLLDLDGHKGKVKSAMRIMNNYHDSLIEERIQQWNDGSKNVEEDLLDVLISLKDVDNNPLLTTKEIKAQVIELIMATIDNPSNAVEWILAEMLIQPELFEKATEELDNIIGKDRLVQESDIPKLNFLKACAREAFRLHPITDFNVPHVSTNDTMVGNYFIPKGSHVLLGRSGIGRNPKVWTEPYKFKPERHLKNDGSDIALTEPELKFISFSTGKRGCPAVMLGSTMTIMLLARLLHGFTWSAHPNISRINLFDSNGVISLDEPLTVAAKPRLAGELYNFSCK*