AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0779830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779830 MtrunA17_Chr5g0444591 97.039 439 7 1 1 433 1 439 0.0 875
Msa0779830 MtrunA17_Chr3g0099501 79.224 438 75 6 2 433 1 428 0.0 694
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779830 AT4G26850.1 74.265 408 94 3 2 403 1 403 0.0 626
Msa0779830 AT5G55120.1 69.142 431 112 4 1 422 1 419 0.0 610

Find 147 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATGCAGGCTTATTATT+TGG 0.174860 5_2:-61196400 Msa0779830:intron
GAGAGAGATATTTGAATGTT+TGG 0.235703 5_2:-61198244 Msa0779830:five_prime_UTR
GAGAAAATGAAAAGAGATTA+AGG 0.257205 5_2:+61198380 None:intergenic
TCCGATCTTCTCTTCCTTGC+CGG 0.261854 5_2:-61198056 Msa0779830:five_prime_UTR
TTGTAACCCAATCGAAAATA+TGG 0.264736 5_2:+61196602 None:intergenic
TCAACATCAATTGGGGCATT+TGG 0.280072 5_2:+61196874 None:intergenic
TAAGCAAATGTTACCATTAG+AGG 0.291796 5_2:+61195499 None:intergenic
ATACACGAAGTTGTTATTTC+AGG 0.304064 5_2:+61195397 None:intergenic
AAATTCAACTTTACTAAAGT+TGG 0.327694 5_2:-61196955 Msa0779830:CDS
GAGTCGACGGAATCATCTTT+TGG 0.333905 5_2:+61195640 None:intergenic
GGAGAATTGTCAACATCAAT+TGG 0.349784 5_2:+61196865 None:intergenic
GTCATCCAATTCTTCAGTTA+AGG 0.350663 5_2:+61195678 None:intergenic
GAAAGTAACTGAAAAGGATT+TGG 0.352459 5_2:-61197536 Msa0779830:CDS
CTCAAATCTTGCTGTATTCA+AGG 0.355868 5_2:-61197739 Msa0779830:intron
AGAGAGATATTTGAATGTTT+GGG 0.357744 5_2:-61198243 Msa0779830:five_prime_UTR
AAGGTTCTTCAGCCCTTTGA+TGG 0.358967 5_2:-61196982 Msa0779830:CDS
CATTGCCTTAACTGAAGAAT+TGG 0.361575 5_2:-61195683 Msa0779830:CDS
CAGACTGCACCTTGTTGTTA+AGG 0.367005 5_2:-61195357 Msa0779830:three_prime_UTR
AACCCTTACGTCGTACAGTT+CGG 0.370214 5_2:+61198150 None:intergenic
TTGGGGCATTTGGATAAAAC+TGG 0.383081 5_2:+61196884 None:intergenic
TTGAATTTGTTTCCATCAAA+GGG 0.385844 5_2:+61196970 None:intergenic
TATAAATCATCTTCACTTCC+AGG 0.386241 5_2:-61196558 Msa0779830:intron
TTGGTGGGAGCCTTCTCAAT+AGG 0.391256 5_2:+61196366 None:intergenic
ACCCTTACGTCGTACAGTTC+GGG 0.392593 5_2:+61198151 None:intergenic
AAGAACAAGTGAGTCCAAAA+AGG 0.404311 5_2:+61197480 None:intergenic
AATGTGGTTGTAAATGAGTT+TGG 0.406128 5_2:+61198404 None:intergenic
AAGAAAATTGCAACTTCAAA+TGG 0.408742 5_2:-61196345 Msa0779830:CDS
ACATATCCTGCTGTGGTGGC+TGG 0.411885 5_2:-61195613 Msa0779830:CDS
AATTCAACTTTACTAAAGTT+GGG 0.412774 5_2:-61196954 Msa0779830:CDS
TTGTAAAGTGTTATATAGAT+AGG 0.416268 5_2:+61198358 None:intergenic
AAAACATGTCCATACTCAAT+AGG 0.417509 5_2:+61196716 None:intergenic
CCTTCGCCGCACGGTGGGCG+TGG 0.420922 5_2:-61198107 Msa0779830:five_prime_UTR
CTCTCATGATCAATCCTTTG+AGG 0.422064 5_2:+61196665 None:intergenic
GTTGAATTTGTTTCCATCAA+AGG 0.422949 5_2:+61196969 None:intergenic
CAAAGTCTTTGTTAACTGAA+TGG 0.427367 5_2:+61198491 None:intergenic
GAGAATTGTCAACATCAATT+GGG 0.428232 5_2:+61196866 None:intergenic
CAGGTTAGTCCTATTGAGTA+TGG 0.430846 5_2:-61196725 Msa0779830:CDS
CTAAAACTAGACTTATTTGA+AGG 0.430873 5_2:-61197938 Msa0779830:five_prime_UTR
GTTGAAATAAGTACCTCTAA+TGG 0.435404 5_2:-61195512 Msa0779830:three_prime_UTR
TAATACAAAACACAAACATT+AGG 0.437426 5_2:+61195456 None:intergenic
CAATTTGAAGCTAGTGAAGA+TGG 0.440382 5_2:-61196913 Msa0779830:CDS
CGAAGTTGTTATTTCAGGCT+TGG 0.441035 5_2:+61195402 None:intergenic
CTTCTCTTCCTTGCCGGTGG+TGG 0.443965 5_2:-61198050 Msa0779830:five_prime_UTR
GAAATATCCGGTTAGAGGTC+TGG 0.444070 5_2:-61196298 Msa0779830:CDS
AAGTTTCACTCTCTGAAGAA+AGG 0.445357 5_2:-61195738 Msa0779830:CDS
TTGCTGAAATATCCGGTTAG+AGG 0.450151 5_2:-61196303 Msa0779830:CDS
CCTCGTACTGTCGGAGGTTG+TGG 0.451366 5_2:-61197772 Msa0779830:CDS
AACCGAGTTCAGAGTTGATA+AGG 0.457439 5_2:-61197001 Msa0779830:CDS
CCACGCCCACCGTGCGGCGA+AGG 0.459138 5_2:+61198107 None:intergenic
AGCTAAGAATCATACATTGA+TGG 0.466074 5_2:+61196831 None:intergenic
TGTCTACAACGTGTCAATAC+AGG 0.467754 5_2:+61198213 None:intergenic
TGCAAGAAGCCTCCAAGCAT+TGG 0.470683 5_2:+61195762 None:intergenic
ATCTGAATTGCTGAAATATC+CGG 0.470981 5_2:-61196310 Msa0779830:CDS
TGCCCGAACTGTACGACGTA+AGG 0.476666 5_2:-61198153 Msa0779830:five_prime_UTR
CGATTGGGTTACAACAGCCT+TGG 0.479123 5_2:-61196593 Msa0779830:CDS
CCCGCGGTGTGGGAGATTAG+TGG 0.479789 5_2:-61195832 Msa0779830:CDS
GTATCAAACCTTGGTTTCAC+AGG 0.482931 5_2:+61197311 None:intergenic
CGTCTGAAGCCAATGCTTGG+AGG 0.485923 5_2:-61195771 Msa0779830:CDS
TCGAAGACCAGACCTCTAAC+CGG 0.495869 5_2:+61196291 None:intergenic
CGTGGTGCTCTGCCTTCTGA+AGG 0.496380 5_2:-61198089 Msa0779830:five_prime_UTR
GATTGAGAAAGTAACTGAAA+AGG 0.496775 5_2:-61197542 Msa0779830:CDS
AGGCGTCTGAAGCCAATGCT+TGG 0.500470 5_2:-61195774 Msa0779830:CDS
TCAGAAATAAGAACATTGTA+AGG 0.501187 5_2:+61196195 None:intergenic
CTTCTTGCTTGCACTTCACA+TGG 0.502279 5_2:-61196642 Msa0779830:CDS
AGAGGAAAGTGAGTGAGAGA+AGG 0.511317 5_2:+61198578 None:intergenic
GGACTCACTTGTTCTTGGAG+AGG 0.525110 5_2:-61197473 Msa0779830:intron
CACACACACTATACTAGGTA+GGG 0.525615 5_2:-61198526 Msa0779830:five_prime_UTR
AATTAGAAAGAGGAAGAAGA+AGG 0.526391 5_2:+61198017 None:intergenic
ACATTGATGGCAACAAAACT+AGG 0.526513 5_2:+61196844 None:intergenic
ACGTTTATTTATTACAAATG+TGG 0.529415 5_2:+61195302 None:intergenic
CAATTCTTCAGTTAAGGCAA+TGG 0.532831 5_2:+61195684 None:intergenic
TATGCCCTTTCCTATTGAGA+AGG 0.533620 5_2:-61196376 Msa0779830:CDS
GTGTCAAGAGGAGCTTCCTA+TGG 0.534484 5_2:-61197503 Msa0779830:CDS
GAAACAAGCTCTTGGAGAAG+TGG 0.534749 5_2:-61195884 Msa0779830:CDS
TGTGGAGCCAGAAATACATA+AGG 0.535192 5_2:+61195320 None:intergenic
TTGGTCTCTTCTTGAGGTGT+CGG 0.535533 5_2:+61197022 None:intergenic
AGGATATGTGCTCGAGTCGA+CGG 0.535661 5_2:+61195627 None:intergenic
TATGCAGAGAAACAAGCTCT+TGG 0.537346 5_2:-61195892 Msa0779830:CDS
AAGAAAAGAAGAAAGATGAA+TGG 0.538392 5_2:+61198305 None:intergenic
AAGAACAAGAAATTAGAAAG+AGG 0.541061 5_2:+61198007 None:intergenic
GAAGCTCCTCTTGACACTCA+TGG 0.544256 5_2:+61197509 None:intergenic
GAAAAGAGATTAAGGAAATG+TGG 0.544324 5_2:+61198388 None:intergenic
ACTCGGTTGGTCTCTTCTTG+AGG 0.545193 5_2:+61197016 None:intergenic
GCAAGGAAGAGAAGATCGGA+GGG 0.546178 5_2:+61198059 None:intergenic
TGTGAACCAGCCACCACAGC+AGG 0.546505 5_2:+61195607 None:intergenic
TACTAAAGTTGGGCAAGAAG+AGG 0.554969 5_2:-61196944 Msa0779830:CDS
GAGGCTGCTCCTCGTACTGT+CGG 0.556620 5_2:-61197781 Msa0779830:CDS
ACACACACACTATACTAGGT+AGG 0.556670 5_2:-61198527 Msa0779830:five_prime_UTR
CAAAGACACCACCACCGGCA+AGG 0.557929 5_2:+61198042 None:intergenic
CTAACCCTTCGCCGCACGGT+GGG 0.558836 5_2:-61198112 Msa0779830:five_prime_UTR
CCGTGCGGCGAAGGGTTAGT+CGG 0.562532 5_2:+61198116 None:intergenic
CACGCCCACCGTGCGGCGAA+GGG 0.571760 5_2:+61198108 None:intergenic
CCACTAATCTCCCACACCGC+GGG 0.571845 5_2:+61195832 None:intergenic
GGGAGCCTTCTCAATAGGAA+AGG 0.572937 5_2:+61196371 None:intergenic
AGGAGCAAAGACACCACCAC+CGG 0.574103 5_2:+61198037 None:intergenic
AACCTTATCAACTCTGAACT+CGG 0.575093 5_2:+61196999 None:intergenic
AGGTGCAGTCTGATTTGCTA+AGG 0.577773 5_2:+61195368 None:intergenic
GCCCGAACTGTACGACGTAA+GGG 0.578157 5_2:-61198152 Msa0779830:five_prime_UTR
TGATAATTGGAAACAACAGT+GGG 0.578848 5_2:+61197820 None:intergenic
TTGATAATTGGAAACAACAG+TGG 0.582085 5_2:+61197819 None:intergenic
ACTAACCCTTCGCCGCACGG+TGG 0.583036 5_2:-61198113 Msa0779830:five_prime_UTR
TTCATTGCTCAGCTTAACGA+GGG 0.583209 5_2:-61197045 Msa0779830:CDS
TTTCATTGCTCAGCTTAACG+AGG 0.583245 5_2:-61197046 Msa0779830:CDS
GGAGCCTTCTCAATAGGAAA+GGG 0.584846 5_2:+61196372 None:intergenic
AATGTTCTTATTTCTGACTG+TGG 0.586663 5_2:-61196189 Msa0779830:CDS
GATCTTCTCTTCCTTGCCGG+TGG 0.588834 5_2:-61198053 Msa0779830:five_prime_UTR
GTACTGTCGGAGGTTGTGGT+CGG 0.589066 5_2:-61197768 Msa0779830:CDS
TTATCAACTCTGAACTCGGT+TGG 0.589202 5_2:+61197003 None:intergenic
ACAAGTAAATCCCGCGGTGT+GGG 0.589495 5_2:-61195842 Msa0779830:CDS
TGATGATGAAGAAAATGAGG+TGG 0.589608 5_2:+61198332 None:intergenic
AAAATTGCAACTTCAAATGG+TGG 0.589975 5_2:-61196342 Msa0779830:CDS
GTTAGAGGTCTGGTCTTCGA+AGG 0.593102 5_2:-61196288 Msa0779830:CDS
ATTTACACATTTCACAAGAG+AGG 0.593722 5_2:+61198560 None:intergenic
GCAATGAAACCACACTCACC+CGG 0.595083 5_2:+61197060 None:intergenic
GGTGCTCTGCCTTCTGAAGG+TGG 0.599472 5_2:-61198086 Msa0779830:five_prime_UTR
GTCTACAACGTGTCAATACA+GGG 0.599693 5_2:+61198214 None:intergenic
CACAAGTAAATCCCGCGGTG+TGG 0.600336 5_2:-61195843 Msa0779830:CDS
CCGACTAACCCTTCGCCGCA+CGG 0.601989 5_2:-61198116 Msa0779830:five_prime_UTR
ACCGGCAAGGAAGAGAAGAT+CGG 0.608083 5_2:+61198055 None:intergenic
CTCGAGCACATATCCTGCTG+TGG 0.608552 5_2:-61195620 Msa0779830:CDS
TCTACAGTAAACAAATTCAG+TGG 0.609855 5_2:-61195572 Msa0779830:exon
AACTTCAAATGGTGGTGTGA+AGG 0.621124 5_2:-61196334 Msa0779830:CDS
AGAGGTCTGGTCTTCGAAGG+TGG 0.621409 5_2:-61196285 Msa0779830:CDS
GGCAAGGAAGAGAAGATCGG+AGG 0.622258 5_2:+61198058 None:intergenic
GGCAAACACTCGAAAATGTG+TGG 0.623954 5_2:+61196686 None:intergenic
ACTAGAATGAAGCACGAGGA+GGG 0.624888 5_2:+61198436 None:intergenic
GGCTATCCATGAGTGTCAAG+AGG 0.628126 5_2:-61197515 Msa0779830:CDS
TTGACACGTTGTAGACATCA+CGG 0.631722 5_2:-61198207 Msa0779830:five_prime_UTR
GAGGGGCTACCACCTTCAGA+AGG 0.635682 5_2:+61198077 None:intergenic
GAGCACATATCCTGCTGTGG+TGG 0.636001 5_2:-61195617 Msa0779830:CDS
TACTAGAATGAAGCACGAGG+AGG 0.637385 5_2:+61198435 None:intergenic
TAGGTGATTCCGGGTGAGTG+TGG 0.637672 5_2:-61197069 Msa0779830:CDS
CCACAACCTCCGACAGTACG+AGG 0.638575 5_2:+61197772 None:intergenic
AGAATTGTCAACATCAATTG+GGG 0.642049 5_2:+61196867 None:intergenic
GTGGGAGATTAGTGGACACA+TGG 0.642377 5_2:-61195824 Msa0779830:CDS
GCTGCTCCTCGTACTGTCGG+AGG 0.655737 5_2:-61197778 Msa0779830:CDS
TGGGAAGATCGCATGCAAAG+AGG 0.664311 5_2:-61197357 Msa0779830:CDS
ACACACACTATACTAGGTAG+GGG 0.674715 5_2:-61198525 Msa0779830:five_prime_UTR
AGAGCACCACGCCCACCGTG+CGG 0.682244 5_2:+61198101 None:intergenic
TCCACTAATCTCCCACACCG+CGG 0.690165 5_2:+61195831 None:intergenic
AAACATTATCCTTAACAACA+AGG 0.690628 5_2:+61195348 None:intergenic
TGTTACTGCCTGTGAAACCA+AGG 0.693649 5_2:-61197319 Msa0779830:intron
TTATAGTTGCAAATGCACCA+AGG 0.707664 5_2:+61196576 None:intergenic
CAAGGAAGAGAAGATCGGAG+GGG 0.720345 5_2:+61198060 None:intergenic
TGACACACAAGTAAATCCCG+CGG 0.742223 5_2:-61195848 Msa0779830:CDS
ACATTTGTAATAAATAAACG+TGG 0.758038 5_2:-61195300 Msa0779830:three_prime_UTR
TTGTACTAGAATGAAGCACG+AGG 0.764573 5_2:+61198432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTATTATTTAATT+TGG - chr5_2:61196204-61196223 Msa0779830:CDS 0.0%
!!! TTTATTATTTAATTTGGTTA+TGG - chr5_2:61196210-61196229 Msa0779830:CDS 10.0%
!!! TTATTATTTAATTTGGTTAT+GGG - chr5_2:61196211-61196230 Msa0779830:CDS 10.0%
!!! AAAAGTTAGTATTTTGTATT+TGG - chr5_2:61195988-61196007 Msa0779830:intron 15.0%
!! TAAAATTAATAATACATGCA+TGG + chr5_2:61196194-61196213 None:intergenic 15.0%
!!! TAGATTAATTTTTGTGATTT+TGG - chr5_2:61196251-61196270 Msa0779830:CDS 15.0%
!!! TGATTATTGAATTTTGATTA+TGG - chr5_2:61196415-61196434 Msa0779830:intron 15.0%
!!! TTGTAAAGTGTTATATAGAT+AGG + chr5_2:61195510-61195529 None:intergenic 20.0%
!!! TTAGTATTTTGTATTTGGTT+TGG - chr5_2:61195993-61196012 Msa0779830:intron 20.0%
!! AAATGATGCTAAAAATCAAA+AGG - chr5_2:61196019-61196038 Msa0779830:intron 20.0%
!! AATGATGCTAAAAATCAAAA+GGG - chr5_2:61196020-61196039 Msa0779830:intron 20.0%
!!! TTTATGTTTTCTTTTTGTTG+TGG - chr5_2:61196162-61196181 Msa0779830:intron 20.0%
!!! TGATACTTTGTTCTTTTTTA+TGG - chr5_2:61196571-61196590 Msa0779830:CDS 20.0%
!!! GATACTTTGTTCTTTTTTAT+GGG - chr5_2:61196572-61196591 Msa0779830:CDS 20.0%
!!! TTTGATTCTTTGTTCTTTTT+GGG - chr5_2:61196644-61196663 Msa0779830:CDS 20.0%
!! AAATTCAACTTTACTAAAGT+TGG - chr5_2:61196910-61196929 Msa0779830:CDS 20.0%
!! AATTCAACTTTACTAAAGTT+GGG - chr5_2:61196911-61196930 Msa0779830:CDS 20.0%
!!! TTTTCACAATATAGTTTTGT+TGG - chr5_2:61197060-61197079 Msa0779830:CDS 20.0%
!!! TTTTTTGTTTTCTTGATAAC+AGG - chr5_2:61197121-61197140 Msa0779830:intron 20.0%
!! AAACATTTATATGACTGTTT+AGG + chr5_2:61197841-61197860 None:intergenic 20.0%
!! TAATACAAAACACAAACATT+AGG + chr5_2:61198412-61198431 None:intergenic 20.0%
!!! TTTTTTACCTTATGTATTTC+TGG - chr5_2:61198538-61198557 Msa0779830:five_prime_UTR 20.0%
!! ACGTTTATTTATTACAAATG+TGG + chr5_2:61198566-61198585 None:intergenic 20.0%
!! ACATTTGTAATAAATAAACG+TGG - chr5_2:61198565-61198584 Msa0779830:five_prime_UTR 20.0%
! GAGAAAATGAAAAGAGATTA+AGG + chr5_2:61195488-61195507 None:intergenic 25.0%
!!! TTTTGATGATGAAGAAAATG+AGG + chr5_2:61195539-61195558 None:intergenic 25.0%
! AAGAAAAGAAGAAAGATGAA+TGG + chr5_2:61195563-61195582 None:intergenic 25.0%
! AGAGAGATATTTGAATGTTT+GGG - chr5_2:61195622-61195641 Msa0779830:CDS 25.0%
! AAGAACAAGAAATTAGAAAG+AGG + chr5_2:61195861-61195880 None:intergenic 25.0%
! CTAAAACTAGACTTATTTGA+AGG - chr5_2:61195927-61195946 Msa0779830:intron 25.0%
! TGTTTCCAATTATCAAAAAG+AGG - chr5_2:61196053-61196072 Msa0779830:intron 25.0%
!!! ATCTTTTTGAAAGCATACAA+AGG + chr5_2:61196306-61196325 None:intergenic 25.0%
!! TGTTGATCTTTTTGCTTAAA+AGG - chr5_2:61196463-61196482 Msa0779830:intron 25.0%
!! TTTTACTCTTTTCATTTCAG+TGG - chr5_2:61196488-61196507 Msa0779830:intron 25.0%
!! TTTACTCTTTTCATTTCAGT+GGG - chr5_2:61196489-61196508 Msa0779830:intron 25.0%
!! CTTTGATTCTTTGTTCTTTT+TGG - chr5_2:61196643-61196662 Msa0779830:CDS 25.0%
!! TTGATTCTTTGTTCTTTTTG+GGG - chr5_2:61196645-61196664 Msa0779830:CDS 25.0%
!! TTGAATTTGTTTCCATCAAA+GGG + chr5_2:61196898-61196917 None:intergenic 25.0%
!!! ATAGTTTTGTTGGTTCATAA+AGG - chr5_2:61197070-61197089 Msa0779830:intron 25.0%
! AAGCTATTCAGAGATATAAT+AGG + chr5_2:61197354-61197373 None:intergenic 25.0%
! CATATGTCCAACAAAATAAT+TGG + chr5_2:61197452-61197471 None:intergenic 25.0%
!!! ATTTGAAGTTGCAATTTTCT+TGG + chr5_2:61197521-61197540 None:intergenic 25.0%
! AAGAAAATTGCAACTTCAAA+TGG - chr5_2:61197520-61197539 Msa0779830:CDS 25.0%
! TCAGAAATAAGAACATTGTA+AGG + chr5_2:61197673-61197692 None:intergenic 25.0%
! ACGTTATGAAATTATGTCAA+GGG + chr5_2:61197902-61197921 None:intergenic 25.0%
! AAACATTATCCTTAACAACA+AGG + chr5_2:61198520-61198539 None:intergenic 25.0%
! ACAAAGATTTTGAATGAGAG+AGG + chr5_2:61195265-61195284 None:intergenic 30.0%
ATTTACACATTTCACAAGAG+AGG + chr5_2:61195308-61195327 None:intergenic 30.0%
CAAAGTCTTTGTTAACTGAA+TGG + chr5_2:61195377-61195396 None:intergenic 30.0%
AATGTGGTTGTAAATGAGTT+TGG + chr5_2:61195464-61195483 None:intergenic 30.0%
GAAAAGAGATTAAGGAAATG+TGG + chr5_2:61195480-61195499 None:intergenic 30.0%
GAGAGAGATATTTGAATGTT+TGG - chr5_2:61195621-61195640 Msa0779830:CDS 30.0%
AATTAGAAAGAGGAAGAAGA+AGG + chr5_2:61195851-61195870 None:intergenic 30.0%
TGATAATTGGAAACAACAGT+GGG + chr5_2:61196048-61196067 None:intergenic 30.0%
! TTGATAATTGGAAACAACAG+TGG + chr5_2:61196049-61196068 None:intergenic 30.0%
TTCCAATTATCAAAAAGAGG+AGG - chr5_2:61196056-61196075 Msa0779830:intron 30.0%
!! AACCTCCTCTTTTTGATAAT+TGG + chr5_2:61196061-61196080 None:intergenic 30.0%
AATTATCAAAAAGAGGAGGT+TGG - chr5_2:61196060-61196079 Msa0779830:intron 30.0%
GATTGAGAAAGTAACTGAAA+AGG - chr5_2:61196323-61196342 Msa0779830:CDS 30.0%
GAAAGTAACTGAAAAGGATT+TGG - chr5_2:61196329-61196348 Msa0779830:CDS 30.0%
! AAGAACAAAGTATCAAACCT+TGG + chr5_2:61196566-61196585 None:intergenic 30.0%
ACAACACAAACACACAAAAT+CGG + chr5_2:61196599-61196618 None:intergenic 30.0%
! TGATTCTTTGTTCTTTTTGG+GGG - chr5_2:61196646-61196665 Msa0779830:CDS 30.0%
! ATGTGTTCTTGTGATCATTT+TGG - chr5_2:61196771-61196790 Msa0779830:intron 30.0%
! GTTGAATTTGTTTCCATCAA+AGG + chr5_2:61196899-61196918 None:intergenic 30.0%
AGAATTGTCAACATCAATTG+GGG + chr5_2:61197001-61197020 None:intergenic 30.0%
GAGAATTGTCAACATCAATT+GGG + chr5_2:61197002-61197021 None:intergenic 30.0%
AGCTAAGAATCATACATTGA+TGG + chr5_2:61197037-61197056 None:intergenic 30.0%
AAAACATGTCCATACTCAAT+AGG + chr5_2:61197152-61197171 None:intergenic 30.0%
! TGCTAATCCATATTTTCGAT+TGG - chr5_2:61197256-61197275 Msa0779830:intron 30.0%
! GCTAATCCATATTTTCGATT+GGG - chr5_2:61197257-61197276 Msa0779830:intron 30.0%
TTGTAACCCAATCGAAAATA+TGG + chr5_2:61197266-61197285 None:intergenic 30.0%
TATAAATCATCTTCACTTCC+AGG - chr5_2:61197307-61197326 Msa0779830:intron 30.0%
TGAGATTATTGCTACAGTAA+TGG - chr5_2:61197373-61197392 Msa0779830:intron 30.0%
AACAGAACAATGATAAGCAA+TGG + chr5_2:61197413-61197432 None:intergenic 30.0%
!! TTATTTTGTTGGACATATGC+AGG - chr5_2:61197453-61197472 Msa0779830:intron 30.0%
ACATATGCAGGCTTATTATT+TGG - chr5_2:61197465-61197484 Msa0779830:intron 30.0%
AAAATTGCAACTTCAAATGG+TGG - chr5_2:61197523-61197542 Msa0779830:CDS 30.0%
ATCTGAATTGCTGAAATATC+CGG - chr5_2:61197555-61197574 Msa0779830:CDS 30.0%
!!! AGGTATGTTGTTGTTTTGTA+GGG + chr5_2:61197653-61197672 None:intergenic 30.0%
!!! AAGGTATGTTGTTGTTTTGT+AGG + chr5_2:61197654-61197673 None:intergenic 30.0%
!! AATGTTCTTATTTCTGACTG+TGG - chr5_2:61197676-61197695 Msa0779830:intron 30.0%
TCTCAAACTAATTTCCTGTT+TGG - chr5_2:61197734-61197753 Msa0779830:intron 30.0%
AAGTGCTTATTTATCCAAAC+AGG + chr5_2:61197751-61197770 None:intergenic 30.0%
TAAGCTAATAAGCTATCCTA+GGG - chr5_2:61197777-61197796 Msa0779830:CDS 30.0%
GACGTTATGAAATTATGTCA+AGG + chr5_2:61197903-61197922 None:intergenic 30.0%
CAAGAAAATGAAAGTTGAAG+AGG + chr5_2:61197925-61197944 None:intergenic 30.0%
TCTACAGTAAACAAATTCAG+TGG - chr5_2:61198293-61198312 Msa0779830:five_prime_UTR 30.0%
GTTGAAATAAGTACCTCTAA+TGG - chr5_2:61198353-61198372 Msa0779830:five_prime_UTR 30.0%
TAAGCAAATGTTACCATTAG+AGG + chr5_2:61198369-61198388 None:intergenic 30.0%
! CTGTATTGTAGTTTTTGTCA+TGG - chr5_2:61198435-61198454 Msa0779830:five_prime_UTR 30.0%
!! ATACACGAAGTTGTTATTTC+AGG + chr5_2:61198471-61198490 None:intergenic 30.0%
TGAATGAGAGAGGAAAAAGA+GGG + chr5_2:61195255-61195274 None:intergenic 35.0%
TTGAATGAGAGAGGAAAAAG+AGG + chr5_2:61195256-61195275 None:intergenic 35.0%
! TGATGATGAAGAAAATGAGG+TGG + chr5_2:61195536-61195555 None:intergenic 35.0%
! CGGCTTTTCTTAGAGTTTAT+CGG - chr5_2:61195678-61195697 Msa0779830:CDS 35.0%
! CTCAAATCTTGCTGTATTCA+AGG - chr5_2:61196126-61196145 Msa0779830:intron 35.0%
AAGAACAAGTGAGTCCAAAA+AGG + chr5_2:61196388-61196407 None:intergenic 35.0%
! TTTTTGGACTCACTTGTTCT+TGG - chr5_2:61196387-61196406 Msa0779830:CDS 35.0%
! TGTGTTTGTGTTGTGCTTTT+TGG - chr5_2:61196605-61196624 Msa0779830:CDS 35.0%
!! GATTCTTTGTTCTTTTTGGG+GGG - chr5_2:61196647-61196666 Msa0779830:CDS 35.0%
TATATCCATGCATCTGCTAA+AGG + chr5_2:61196694-61196713 None:intergenic 35.0%
!! TCTTGTGATCATTTTGGTGT+AGG - chr5_2:61196777-61196796 Msa0779830:intron 35.0%
AACCTTATCAACTCTGAACT+CGG + chr5_2:61196869-61196888 None:intergenic 35.0%
! CAATTTGAAGCTAGTGAAGA+TGG - chr5_2:61196952-61196971 Msa0779830:CDS 35.0%
GGAGAATTGTCAACATCAAT+TGG + chr5_2:61197003-61197022 None:intergenic 35.0%
! ACATTGATGGCAACAAAACT+AGG + chr5_2:61197024-61197043 None:intergenic 35.0%
TTATAGTTGCAAATGCACCA+AGG + chr5_2:61197292-61197311 None:intergenic 35.0%
ATTGTTCTGTTTCGCACTTT+CGG - chr5_2:61197422-61197441 Msa0779830:intron 35.0%
!! CGGCAATCCAATTATTTTGT+TGG - chr5_2:61197442-61197461 Msa0779830:intron 35.0%
! GAAGTTGCAATTTTCTTGGT+GGG + chr5_2:61197517-61197536 None:intergenic 35.0%
! TGAAGTTGCAATTTTCTTGG+TGG + chr5_2:61197518-61197537 None:intergenic 35.0%
!! TTTGAGAGTTGTTTTACCTG+TGG + chr5_2:61197721-61197740 None:intergenic 35.0%
GTAAGCTAATAAGCTATCCT+AGG - chr5_2:61197776-61197795 Msa0779830:CDS 35.0%
GGCTTATTTGAGCTTATCTA+CGG + chr5_2:61197868-61197887 None:intergenic 35.0%
AAATTATGTCAAGGGCTGTT+TGG + chr5_2:61197894-61197913 None:intergenic 35.0%
!!! CATGGTTTTGAAGAGGAAAA+AGG - chr5_2:61198059-61198078 Msa0779830:five_prime_UTR 35.0%
! AAGTTTCACTCTCTGAAGAA+AGG - chr5_2:61198127-61198146 Msa0779830:five_prime_UTR 35.0%
CAATTCTTCAGTTAAGGCAA+TGG + chr5_2:61198184-61198203 None:intergenic 35.0%
CATTGCCTTAACTGAAGAAT+TGG - chr5_2:61198182-61198201 Msa0779830:five_prime_UTR 35.0%
GTCATCCAATTCTTCAGTTA+AGG + chr5_2:61198190-61198209 None:intergenic 35.0%
ACACACACACACACTATACT+AGG - chr5_2:61195334-61195353 Msa0779830:three_prime_UTR 40.0%
ACACACACACTATACTAGGT+AGG - chr5_2:61195338-61195357 Msa0779830:three_prime_UTR 40.0%
CACACACACTATACTAGGTA+GGG - chr5_2:61195339-61195358 Msa0779830:three_prime_UTR 40.0%
ACACACACTATACTAGGTAG+GGG - chr5_2:61195340-61195359 Msa0779830:three_prime_UTR 40.0%
TTGTACTAGAATGAAGCACG+AGG + chr5_2:61195436-61195455 None:intergenic 40.0%
GTCTACAACGTGTCAATACA+GGG + chr5_2:61195654-61195673 None:intergenic 40.0%
TGTCTACAACGTGTCAATAC+AGG + chr5_2:61195655-61195674 None:intergenic 40.0%
TTGACACGTTGTAGACATCA+CGG - chr5_2:61195658-61195677 Msa0779830:CDS 40.0%
GTATCAAACCTTGGTTTCAC+AGG + chr5_2:61196557-61196576 None:intergenic 40.0%
!! TTGTGCTTTTTGGAGATGCA+TGG - chr5_2:61196615-61196634 Msa0779830:CDS 40.0%
!! CATTTTGGTGTAGGTGATTC+CGG - chr5_2:61196786-61196805 Msa0779830:intron 40.0%
!! ATTTTGGTGTAGGTGATTCC+GGG - chr5_2:61196787-61196806 Msa0779830:intron 40.0%
TTTCATTGCTCAGCTTAACG+AGG - chr5_2:61196819-61196838 Msa0779830:intron 40.0%
TTCATTGCTCAGCTTAACGA+GGG - chr5_2:61196820-61196839 Msa0779830:intron 40.0%
TTATCAACTCTGAACTCGGT+TGG + chr5_2:61196865-61196884 None:intergenic 40.0%
!! AACCGAGTTCAGAGTTGATA+AGG - chr5_2:61196864-61196883 Msa0779830:CDS 40.0%
TACTAAAGTTGGGCAAGAAG+AGG - chr5_2:61196921-61196940 Msa0779830:CDS 40.0%
! TTGGGGCATTTGGATAAAAC+TGG + chr5_2:61196984-61197003 None:intergenic 40.0%
! TCAACATCAATTGGGGCATT+TGG + chr5_2:61196994-61197013 None:intergenic 40.0%
TGGTTCATAAAGGCTAGAGT+AGG - chr5_2:61197080-61197099 Msa0779830:intron 40.0%
! CAGGTTAGTCCTATTGAGTA+TGG - chr5_2:61197140-61197159 Msa0779830:intron 40.0%
!!! TTTTCGAGTGTTTGCCTCAA+AGG - chr5_2:61197186-61197205 Msa0779830:intron 40.0%
CTCTCATGATCAATCCTTTG+AGG + chr5_2:61197203-61197222 None:intergenic 40.0%
TATGCCCTTTCCTATTGAGA+AGG - chr5_2:61197489-61197508 Msa0779830:CDS 40.0%
! AACTTCAAATGGTGGTGTGA+AGG - chr5_2:61197531-61197550 Msa0779830:CDS 40.0%
TTGCTGAAATATCCGGTTAG+AGG - chr5_2:61197562-61197581 Msa0779830:CDS 40.0%
! GCAAGTGTTTCTTTTACCAC+AGG - chr5_2:61197702-61197721 Msa0779830:intron 40.0%
TATGCAGAGAAACAAGCTCT+TGG - chr5_2:61197973-61197992 Msa0779830:five_prime_UTR 40.0%
!! CGAAGTTGTTATTTCAGGCT+TGG + chr5_2:61198466-61198485 None:intergenic 40.0%
TGTGGAGCCAGAAATACATA+AGG + chr5_2:61198548-61198567 None:intergenic 40.0%
AGAGGAAAGTGAGTGAGAGA+AGG + chr5_2:61195290-61195309 None:intergenic 45.0%
ACTAGAATGAAGCACGAGGA+GGG + chr5_2:61195432-61195451 None:intergenic 45.0%
TACTAGAATGAAGCACGAGG+AGG + chr5_2:61195433-61195452 None:intergenic 45.0%
AACCCTTACGTCGTACAGTT+CGG + chr5_2:61195718-61195737 None:intergenic 45.0%
TCAAAAAGAGGAGGTTGGAG+AGG - chr5_2:61196065-61196084 Msa0779830:intron 45.0%
AGTGAGTCCAAAAAGGCCAT+AGG + chr5_2:61196381-61196400 None:intergenic 45.0%
TGTTACTGCCTGTGAAACCA+AGG - chr5_2:61196546-61196565 Msa0779830:intron 45.0%
TTGTGCCTTTAGCAGATGCA+TGG - chr5_2:61196686-61196705 Msa0779830:CDS 45.0%
TTGGTCTCTTCTTGAGGTGT+CGG + chr5_2:61196846-61196865 None:intergenic 45.0%
AAGGTTCTTCAGCCCTTTGA+TGG - chr5_2:61196883-61196902 Msa0779830:CDS 45.0%
GGCAAACACTCGAAAATGTG+TGG + chr5_2:61197182-61197201 None:intergenic 45.0%
CTTCTTGCTTGCACTTCACA+TGG - chr5_2:61197223-61197242 Msa0779830:intron 45.0%
TCATCTTCACTTCCAGGTAC+TGG - chr5_2:61197313-61197332 Msa0779830:intron 45.0%
AGCTATCAATGTCCAGTACC+TGG + chr5_2:61197328-61197347 None:intergenic 45.0%
GGAGCCTTCTCAATAGGAAA+GGG + chr5_2:61197496-61197515 None:intergenic 45.0%
GAAATATCCGGTTAGAGGTC+TGG - chr5_2:61197567-61197586 Msa0779830:CDS 45.0%
AAGCTATCCTAGGGAGCTTA+TGG - chr5_2:61197786-61197805 Msa0779830:CDS 45.0%
ATGTCAAGGGCTGTTTGGAT+CGG + chr5_2:61197889-61197908 None:intergenic 45.0%
GAAACAAGCTCTTGGAGAAG+TGG - chr5_2:61197981-61198000 Msa0779830:five_prime_UTR 45.0%
TGACACACAAGTAAATCCCG+CGG - chr5_2:61198017-61198036 Msa0779830:five_prime_UTR 45.0%
!!! GTGGACACATGGTTTTGAAG+AGG - chr5_2:61198052-61198071 Msa0779830:five_prime_UTR 45.0%
GAGGAAAAAGGATTTCGACG+AGG - chr5_2:61198071-61198090 Msa0779830:five_prime_UTR 45.0%
! GAGTCGACGGAATCATCTTT+TGG + chr5_2:61198228-61198247 None:intergenic 45.0%
!! AGGTGCAGTCTGATTTGCTA+AGG + chr5_2:61198500-61198519 None:intergenic 45.0%
!! CAGACTGCACCTTGTTGTTA+AGG - chr5_2:61198508-61198527 Msa0779830:five_prime_UTR 45.0%
ACCCTTACGTCGTACAGTTC+GGG + chr5_2:61195717-61195736 None:intergenic 50.0%
CAAGGAAGAGAAGATCGGAG+GGG + chr5_2:61195808-61195827 None:intergenic 50.0%
GCAAGGAAGAGAAGATCGGA+GGG + chr5_2:61195809-61195828 None:intergenic 50.0%
TCCGATCTTCTCTTCCTTGC+CGG - chr5_2:61195809-61195828 Msa0779830:CDS 50.0%
ACCGGCAAGGAAGAGAAGAT+CGG + chr5_2:61195813-61195832 None:intergenic 50.0%
GGCTATCCATGAGTGTCAAG+AGG - chr5_2:61196350-61196369 Msa0779830:CDS 50.0%
GAAGCTCCTCTTGACACTCA+TGG + chr5_2:61196359-61196378 None:intergenic 50.0%
GTGTCAAGAGGAGCTTCCTA+TGG - chr5_2:61196362-61196381 Msa0779830:CDS 50.0%
! GGAGCTTCCTATGGCCTTTT+TGG - chr5_2:61196371-61196390 Msa0779830:CDS 50.0%
GGACTCACTTGTTCTTGGAG+AGG - chr5_2:61196392-61196411 Msa0779830:CDS 50.0%
TGGGAAGATCGCATGCAAAG+AGG - chr5_2:61196508-61196527 Msa0779830:intron 50.0%
GCAATGAAACCACACTCACC+CGG + chr5_2:61196808-61196827 None:intergenic 50.0%
!! ACTCGGTTGGTCTCTTCTTG+AGG + chr5_2:61196852-61196871 None:intergenic 50.0%
CGATTGGGTTACAACAGCCT+TGG - chr5_2:61197272-61197291 Msa0779830:intron 50.0%
GGGAGCCTTCTCAATAGGAA+AGG + chr5_2:61197497-61197516 None:intergenic 50.0%
TTGGTGGGAGCCTTCTCAAT+AGG + chr5_2:61197502-61197521 None:intergenic 50.0%
TCGAAGACCAGACCTCTAAC+CGG + chr5_2:61197577-61197596 None:intergenic 50.0%
! GTTAGAGGTCTGGTCTTCGA+AGG - chr5_2:61197577-61197596 Msa0779830:intron 50.0%
GTCATGTCCATAAGCTCCCT+AGG + chr5_2:61197796-61197815 None:intergenic 50.0%
ACAAGTAAATCCCGCGGTGT+GGG - chr5_2:61198023-61198042 Msa0779830:five_prime_UTR 50.0%
! GTGGGAGATTAGTGGACACA+TGG - chr5_2:61198041-61198060 Msa0779830:five_prime_UTR 50.0%
TGCAAGAAGCCTCCAAGCAT+TGG + chr5_2:61198106-61198125 None:intergenic 50.0%
AGGATATGTGCTCGAGTCGA+CGG + chr5_2:61198241-61198260 None:intergenic 50.0%
TGCCCGAACTGTACGACGTA+AGG - chr5_2:61195712-61195731 Msa0779830:CDS 55.0%
GCCCGAACTGTACGACGTAA+GGG - chr5_2:61195713-61195732 Msa0779830:CDS 55.0%
GGCAAGGAAGAGAAGATCGG+AGG + chr5_2:61195810-61195829 None:intergenic 55.0%
GATCTTCTCTTCCTTGCCGG+TGG - chr5_2:61195812-61195831 Msa0779830:CDS 55.0%
AGGAGCAAAGACACCACCAC+CGG + chr5_2:61195831-61195850 None:intergenic 55.0%
GTACTGTCGGAGGTTGTGGT+CGG - chr5_2:61196097-61196116 Msa0779830:intron 55.0%
TAGGTGATTCCGGGTGAGTG+TGG - chr5_2:61196796-61196815 Msa0779830:intron 55.0%
! AGAGGTCTGGTCTTCGAAGG+TGG - chr5_2:61197580-61197599 Msa0779830:intron 55.0%
CACAAGTAAATCCCGCGGTG+TGG - chr5_2:61198022-61198041 Msa0779830:five_prime_UTR 55.0%
TCCACTAATCTCCCACACCG+CGG + chr5_2:61198037-61198056 None:intergenic 55.0%
! AGGCGTCTGAAGCCAATGCT+TGG - chr5_2:61198091-61198110 Msa0779830:five_prime_UTR 55.0%
! CGTCTGAAGCCAATGCTTGG+AGG - chr5_2:61198094-61198113 Msa0779830:five_prime_UTR 55.0%
CTCGAGCACATATCCTGCTG+TGG - chr5_2:61198245-61198264 Msa0779830:five_prime_UTR 55.0%
GAGCACATATCCTGCTGTGG+TGG - chr5_2:61198248-61198267 Msa0779830:five_prime_UTR 55.0%
ACATATCCTGCTGTGGTGGC+TGG - chr5_2:61198252-61198271 Msa0779830:five_prime_UTR 55.0%
CGTGGTGCTCTGCCTTCTGA+AGG - chr5_2:61195776-61195795 Msa0779830:CDS 60.0%
! GGTGCTCTGCCTTCTGAAGG+TGG - chr5_2:61195779-61195798 Msa0779830:CDS 60.0%
GAGGGGCTACCACCTTCAGA+AGG + chr5_2:61195791-61195810 None:intergenic 60.0%
CTTCTCTTCCTTGCCGGTGG+TGG - chr5_2:61195815-61195834 Msa0779830:CDS 60.0%
CAAAGACACCACCACCGGCA+AGG + chr5_2:61195826-61195845 None:intergenic 60.0%
GAGGCTGCTCCTCGTACTGT+CGG - chr5_2:61196084-61196103 Msa0779830:intron 60.0%
CCACAACCTCCGACAGTACG+AGG + chr5_2:61196096-61196115 None:intergenic 60.0%
CCTCGTACTGTCGGAGGTTG+TGG - chr5_2:61196093-61196112 Msa0779830:intron 60.0%
CCACTAATCTCCCACACCGC+GGG + chr5_2:61198036-61198055 None:intergenic 60.0%
TGTGAACCAGCCACCACAGC+AGG + chr5_2:61198261-61198280 None:intergenic 60.0%
! CCGTGCGGCGAAGGGTTAGT+CGG + chr5_2:61195752-61195771 None:intergenic 65.0%
CCGACTAACCCTTCGCCGCA+CGG - chr5_2:61195749-61195768 Msa0779830:CDS 65.0%
ACTAACCCTTCGCCGCACGG+TGG - chr5_2:61195752-61195771 Msa0779830:CDS 65.0%
CTAACCCTTCGCCGCACGGT+GGG - chr5_2:61195753-61195772 Msa0779830:CDS 65.0%
GCTGCTCCTCGTACTGTCGG+AGG - chr5_2:61196087-61196106 Msa0779830:intron 65.0%
CCCGCGGTGTGGGAGATTAG+TGG - chr5_2:61198033-61198052 Msa0779830:five_prime_UTR 65.0%
! AGAGCACCACGCCCACCGTG+CGG + chr5_2:61195767-61195786 None:intergenic 70.0%
CACGCCCACCGTGCGGCGAA+GGG + chr5_2:61195760-61195779 None:intergenic 75.0%
! CCACGCCCACCGTGCGGCGA+AGG + chr5_2:61195761-61195780 None:intergenic 80.0%
! CCTTCGCCGCACGGTGGGCG+TGG - chr5_2:61195758-61195777 Msa0779830:CDS 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 61195210 61198677 61195210 ID=Msa0779830;Name=Msa0779830
chr5_2 mRNA 61195210 61198677 61195210 ID=Msa0779830-mRNA-1;Parent=Msa0779830;Name=Msa0779830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=811|0.83|0.85|1|0.83|0.71|7|375|433
chr5_2 exon 61195210 61195917 61195210 ID=Msa0779830-mRNA-1:exon:18060;Parent=Msa0779830-mRNA-1
chr5_2 exon 61196182 61196412 61196182 ID=Msa0779830-mRNA-1:exon:18059;Parent=Msa0779830-mRNA-1
chr5_2 exon 61196559 61196744 61196559 ID=Msa0779830-mRNA-1:exon:18058;Parent=Msa0779830-mRNA-1
chr5_2 exon 61196846 61197088 61196846 ID=Msa0779830-mRNA-1:exon:18057;Parent=Msa0779830-mRNA-1
chr5_2 exon 61197320 61197379 61197320 ID=Msa0779830-mRNA-1:exon:18056;Parent=Msa0779830-mRNA-1
chr5_2 exon 61197474 61197595 61197474 ID=Msa0779830-mRNA-1:exon:18055;Parent=Msa0779830-mRNA-1
chr5_2 exon 61197740 61198677 61197740 ID=Msa0779830-mRNA-1:exon:18054;Parent=Msa0779830-mRNA-1
chr5_2 five_prime_UTR 61197867 61198677 61197867 ID=Msa0779830-mRNA-1:five_prime_utr;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61197740 61197866 61197740 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61197474 61197595 61197474 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61197320 61197379 61197320 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61196846 61197088 61196846 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61196559 61196744 61196559 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61196182 61196412 61196182 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 CDS 61195585 61195917 61195585 ID=Msa0779830-mRNA-1:cds;Parent=Msa0779830-mRNA-1
chr5_2 three_prime_UTR 61195210 61195584 61195210 ID=Msa0779830-mRNA-1:three_prime_utr;Parent=Msa0779830-mRNA-1
Gene Sequence

>Msa0779830

ATGATGCTAAAAATCAAAAGGGTTCCCACTGTTGTTTCCAATTATCAAAAAGAGGAGGTTGGAGAGGCTGCTCCTCGTACTGTCGGAGGTTGTGGTCGGAATTGTCTCAAATCTTGCTGTATTCAAGATGCAAAGCTACCTTTGTATGCTTTCAAAAAGATTGAGAAAGTAACTGAAAAGGATTTGGCTATCCATGAGTGTCAAGAGGAGCTTCCTATGGCCTTTTTGGACTCACTTGTTCTTGGAGAGTGGGAAGATCGCATGCAAAGAGGACTTTTTCGTTATGATGTTACTGCCTGTGAAACCAAGGTGATTCCGGGTGAGTGTGGTTTCATTGCTCAGCTTAACGAGGGCCGACACCTCAAGAAGAGACCAACCGAGTTCAGAGTTGATAAGGTTCTTCAGCCCTTTGATGGAAACAAATTCAACTTTACTAAAGTTGGGCAAGAAGAGGTTCTGTTTCAATTTGAAGCTAGTGAAGATGGTGAAGTCCAGTTTTATCCAAATGCCCCAATTGATGTTGACAATTCTCCTAGTTTTGTTGCCATCAATGTTAGTCCTATTGAGTATGGACATGTTTTGCTGATTCCACACATTTTCGAGTGTTTGCCTCAAAGGATTGATCATGAGAGCTTCTTGCTTGCACTTCACATGGCAGCTGAAGCTGCTAATCCATATTTTCGATTGGGTTACAACAGCCTTGGTGCATTTGCAACTATAAATCATCTTCACTTCCAGGCTTATTATTTGGCTATGCCCTTTCCTATTGAGAAGGCTCCCACCAAGAAAATTGCAACTTCAAATGGTGGTGTGAAGGTATCTGAATTGCTGAAATATCCGGTTAGAGGTCTGGTCTTCGAAGGTGGCGACACGCTCGAAGATTTATCAAAAATTGTTTCAGATGCTTGTATCTCCCTACAAAACAACAACATACCTTACAATGTTCTTATTTCTGACTGTGGAACGCAATGTTATGCAGAGAAACAAGCTCTTGGAGAAGTGGATGCTGAGCTTCTTGACACACAAGTAAATCCCGCGGTGTGGGAGATTAGTGGACACATGGTTTTGAAGAGGAAAAAGGATTTCGACGAGGCGTCTGAAGCCAATGCTTGGAGGCTTCTTGCAGAAGTTTCACTCTCTGAAGAAAGGTTTCAAGAAGTTAATGCTATTATCTTTGAAGCCATTGCCTTAACTGAAGAATTGGATGACAAAGCTCAATGTCTTCCAAAAGATGATTCCGTCGACTCGAGCACATATCCTGCTGTGGTGGCTGGTTCACAAGAATGTGTTGTTCTACAGTAA

Protein sequence

>Msa0779830

MMLKIKRVPTVVSNYQKEEVGEAAPRTVGGCGRNCLKSCCIQDAKLPLYAFKKIEKVTEKDLAIHECQEELPMAFLDSLVLGEWEDRMQRGLFRYDVTACETKVIPGECGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFYPNAPIDVDNSPSFVAINVSPIEYGHVLLIPHIFECLPQRIDHESFLLALHMAAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPIEKAPTKKIATSNGGVKVSELLKYPVRGLVFEGGDTLEDLSKIVSDACISLQNNNIPYNVLISDCGTQCYAEKQALGEVDAELLDTQVNPAVWEISGHMVLKRKKDFDEASEANAWRLLAEVSLSEERFQEVNAIIFEAIALTEELDDKAQCLPKDDSVDSSTYPAVVAGSQECVVLQ*