AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0198140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198140 MtrunA17_Chr2g0291481 97.432 740 19 0 1 740 1 740 0.0 1468
Msa0198140 MtrunA17_Chr1g0202741 31.755 718 448 15 39 739 9 701 1.21e-108 346
Msa0198140 MtrunA17_Chr1g0202731 31.154 719 451 17 39 739 14 706 1.94e-105 338
Msa0198140 MtrunA17_Chr8g0348521 32.421 731 423 20 39 738 9 699 1.71e-101 327
Msa0198140 MtrunA17_Chr8g0348531 33.431 685 410 17 73 738 57 714 1.82e-101 327
Msa0198140 MtrunA17_Chr4g0058571 30.806 633 402 13 128 740 114 730 2.25e-82 277
Msa0198140 MtrunA17_Chr8g0349071 36.478 318 178 6 257 568 1 300 1.21e-52 184
Msa0198140 MtrunA17_Chr2g0301511 30.455 220 128 6 286 483 541 757 2.65e-22 102
Msa0198140 MtrunA17_Chr1g0192121 26.749 243 148 6 293 509 511 749 5.61e-21 98.6
Msa0198140 MtrunA17_Chr7g0272591 27.477 222 126 7 293 486 524 738 5.66e-21 98.6
Msa0198140 MtrunA17_Chr4g0061441 25.651 269 168 8 289 533 475 735 6.35e-21 98.2
Msa0198140 MtrunA17_Chr8g0387591 28.829 222 126 6 286 482 552 766 1.16e-20 97.4
Msa0198140 MtrunA17_Chr3g0131401 26.697 221 124 5 293 483 541 753 3.46e-20 95.9
Msa0198140 MtrunA17_Chr8g0385411 26.977 215 131 5 293 483 520 732 8.04e-20 94.7
Msa0198140 MtrunA17_Chr3g0131381 27.511 229 127 6 286 483 527 747 1.18e-19 94.4
Msa0198140 MtrunA17_Chr3g0131361 26.457 223 127 7 293 483 522 739 1.05e-17 88.2
Msa0198140 MtrunA17_Chr7g0238371 24.898 245 148 6 293 504 469 710 3.86e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198140 AT5G49740.1 58.275 719 283 6 36 740 32 747 0.0 867
Msa0198140 AT5G49730.1 57.858 719 284 7 36 740 25 738 0.0 860
Msa0198140 AT5G49740.3 57.015 670 271 6 36 691 32 698 0.0 781
Msa0198140 AT5G49740.2 61.057 511 193 3 36 540 32 542 0.0 651
Msa0198140 AT5G49730.2 60.665 511 193 4 36 540 25 533 0.0 648
Msa0198140 AT1G01580.1 33.714 700 410 17 67 739 52 724 7.30e-117 369
Msa0198140 AT1G01580.2 33.714 700 410 17 67 739 130 802 7.70e-116 368
Msa0198140 AT1G01590.1 33.237 689 408 17 48 715 28 685 2.69e-110 351
Msa0198140 AT5G23980.1 31.319 728 436 17 39 739 8 698 5.86e-108 344
Msa0198140 AT5G23990.2 31.818 726 435 18 39 739 8 698 1.06e-107 344
Msa0198140 AT1G23020.7 31.811 679 417 16 48 715 28 671 8.89e-102 328
Msa0198140 AT1G23020.4 31.818 682 416 17 48 715 28 674 1.35e-100 325
Msa0198140 AT1G23020.3 31.818 682 416 17 48 715 28 674 1.35e-100 325
Msa0198140 AT1G23020.1 31.818 682 416 17 48 715 51 697 1.76e-100 325
Msa0198140 AT1G23020.5 31.818 682 416 17 48 715 51 697 1.76e-100 325
Msa0198140 AT1G23020.6 31.625 683 417 17 48 715 28 675 7.05e-100 323
Msa0198140 AT1G23020.2 31.625 683 417 17 48 715 51 698 1.19e-99 323
Msa0198140 AT5G23990.3 33.618 586 341 14 170 739 13 566 2.60e-96 310
Msa0198140 AT5G23990.1 33.564 578 344 13 178 739 103 656 8.99e-95 308
Msa0198140 AT5G50160.1 30.170 706 428 16 76 740 47 728 1.28e-85 286
Msa0198140 AT5G50160.2 31.802 566 334 12 210 740 1 549 8.31e-77 258
Msa0198140 AT1G19230.1 30.631 222 128 5 286 484 536 754 1.46e-25 113
Msa0198140 AT1G19230.2 30.631 222 128 5 286 484 562 780 1.51e-25 113
Msa0198140 AT5G07390.2 28.384 229 130 7 284 483 479 702 5.75e-22 102
Msa0198140 AT5G07390.1 28.384 229 130 7 284 483 511 734 6.70e-22 102
Msa0198140 AT4G25090.1 29.412 221 130 7 284 483 473 688 6.79e-22 101
Msa0198140 AT4G25090.2 27.336 289 164 11 284 533 461 742 7.37e-22 101
Msa0198140 AT1G64060.1 29.817 218 129 6 286 482 558 772 2.20e-21 100
Msa0198140 AT1G09090.2 26.818 220 134 6 289 484 473 689 8.75e-21 98.2
Msa0198140 AT5G47910.1 28.761 226 128 6 293 493 554 771 1.72e-20 97.4
Msa0198140 AT5G51060.1 24.620 329 183 12 265 533 487 810 2.86e-19 93.6
Msa0198140 AT5G60010.1 27.826 230 129 7 293 487 494 721 1.21e-18 91.3
Msa0198140 AT4G11230.1 30.588 170 106 4 323 482 592 759 2.93e-18 90.1
Msa0198140 AT3G45810.1 26.271 236 139 6 285 487 497 730 1.80e-16 84.3
Msa0198140 AT1G09090.1 29.577 142 85 4 289 418 473 611 3.09e-14 77.0

Find 203 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCACATGTTGGAAATTT+TGG 0.012603 2_1:+16740900 Msa0198140:CDS
CTCTAGCTTCATTTCTTTAA+TGG 0.116575 2_1:+16744075 Msa0198140:exon
AATAATATGTGCTTATAATT+TGG 0.131596 2_1:-16744440 None:intergenic
TTTATCAACCTTGATGTTAT+TGG 0.134284 2_1:-16743044 None:intergenic
TCACATTGCTGTTCTTATTA+AGG 0.174893 2_1:+16741823 Msa0198140:CDS
TTTCCATAATCTTCATTATA+TGG 0.178699 2_1:+16739183 Msa0198140:CDS
TTTCCTATGCCTAGTGATTA+TGG 0.198831 2_1:+16742773 Msa0198140:CDS
GAAGACTCACTTCTTGAATT+AGG 0.211364 2_1:-16741122 None:intergenic
CATAATCTTTATTGTGTTCA+TGG 0.219086 2_1:+16741437 Msa0198140:CDS
ATTGCATACCTAATTATTTC+TGG 0.228186 2_1:+16739584 Msa0198140:CDS
GCTGTTCTTATTAAGGTTCT+TGG 0.232326 2_1:+16741830 Msa0198140:CDS
ATCCAGTTGGATTGGTTATA+TGG 0.235123 2_1:+16742906 Msa0198140:CDS
CAAACAATTAAAATATTTCT+TGG 0.237519 2_1:-16742258 None:intergenic
TTGGTACAGGAAACAATTTC+TGG 0.238946 2_1:+16742810 Msa0198140:CDS
CAATAAAGATTATGTATAAT+TGG 0.241871 2_1:-16741428 None:intergenic
ATGTGGGTGACCTCGCTTCC+TGG 0.264483 2_1:+16741366 Msa0198140:CDS
TTGTTGTGTCAGCTACTAAA+TGG 0.270670 2_1:+16739144 Msa0198140:CDS
CAGTCCATTGTAAGATAAAA+AGG 0.273035 2_1:+16744266 Msa0198140:three_prime_UTR
GTAGCTGACACAACAAAATT+AGG 0.287451 2_1:-16739137 None:intergenic
AGCCCATATAATGAAGATTA+TGG 0.296364 2_1:-16739186 None:intergenic
GTGGTATAGTGGTTGGATTT+TGG 0.304110 2_1:+16742984 Msa0198140:CDS
TGAGTCATTTCTTGTAACTA+TGG 0.312971 2_1:+16739037 Msa0198140:exon
GGACTCCGTTCGGGCGGGAT+TGG 0.318769 2_1:+16740922 Msa0198140:CDS
TGGAACCCATGATAATATTA+AGG 0.319857 2_1:-16738922 None:intergenic
TTCAGCAGTGGAACTTCCTT+TGG 0.321244 2_1:+16739269 Msa0198140:CDS
GATCCTCCCCAGAAATAATT+AGG 0.323576 2_1:-16739592 None:intergenic
TGAATCAATGTCAGAGAAAT+GGG 0.324651 2_1:+16743918 Msa0198140:CDS
ATCCTTAAAAGGACTCTATA+AGG 0.325913 2_1:+16744296 Msa0198140:three_prime_UTR
ATCCTTATCAATGGACCATT+TGG 0.329104 2_1:+16739957 Msa0198140:CDS
TTGAATCAATGTCAGAGAAA+TGG 0.333723 2_1:+16743917 Msa0198140:CDS
TTCCATAATCTTCATTATAT+GGG 0.341924 2_1:+16739184 Msa0198140:CDS
GTTTCTTCTAGCCCTTTAGA+TGG 0.344014 2_1:+16741794 Msa0198140:CDS
GTTGATAAAATTGAGCAAAA+TGG 0.345926 2_1:+16743058 Msa0198140:CDS
AAACAAGTTTATAAGGGTTA+TGG 0.350301 2_1:-16744397 None:intergenic
CTTGTAGTCTGCATGGTTGC+AGG 0.353731 2_1:+16742947 Msa0198140:CDS
TCCTTATCAATGGACCATTT+GGG 0.354970 2_1:+16739958 Msa0198140:CDS
CATTTACTGTCCTTCTTGAT+TGG 0.357857 2_1:-16741542 None:intergenic
TGCATGGATTGTTCACAAAA+TGG 0.360348 2_1:+16739240 Msa0198140:CDS
TACCACCTGCCACTAATATA+AGG 0.362052 2_1:-16742164 None:intergenic
GGCTCTAGGCCAGACTTTAA+AGG 0.367135 2_1:+16743142 Msa0198140:CDS
TTATTAGAATGGAAAGATAT+TGG 0.372165 2_1:+16741297 Msa0198140:CDS
CTATATGTTCCCTTCGTTGA+AGG 0.376889 2_1:+16744523 Msa0198140:three_prime_UTR
TTATTAAGGTTCTTGGCAAA+TGG 0.379591 2_1:+16741837 Msa0198140:CDS
CCCCTTTGCAGTTATTAGAA+TGG 0.380554 2_1:+16741286 Msa0198140:intron
CTATGTTATTGAGTGGCTAA+TGG 0.381925 2_1:+16741092 Msa0198140:CDS
AAGGTACTATAATCCTTAAA+AGG 0.385912 2_1:+16744285 Msa0198140:three_prime_UTR
CAAAGCTATGACTGTGGAAA+TGG 0.386950 2_1:-16744050 None:intergenic
TCCTTGTGGTACTGTGGAAA+TGG 0.388446 2_1:+16741584 Msa0198140:CDS
ATATTAGTGGCAGGTGGTAT+TGG 0.391857 2_1:+16742168 Msa0198140:CDS
CTTGAAGGAAAATGAAGCTT+AGG 0.393980 2_1:-16741733 None:intergenic
GCCACTTACATCAAGTGATA+TGG 0.399229 2_1:-16741971 None:intergenic
GCTGATAACTCCTGCTAGAT+TGG 0.399708 2_1:-16741325 None:intergenic
CAAGTGTTGCACAAGAAATC+AGG 0.401849 2_1:+16743989 Msa0198140:CDS
CAGCTACTAAATGGACTCTT+AGG 0.404900 2_1:+16739153 Msa0198140:CDS
TTGCATACCTAATTATTTCT+GGG 0.411386 2_1:+16739585 Msa0198140:CDS
CTATATAAATCCAGTTGGAT+TGG 0.422614 2_1:+16742898 Msa0198140:CDS
AGTCCTTTGCTTTCTAAGAA+AGG 0.424385 2_1:+16739080 Msa0198140:CDS
TATGTCATTTCATCTACCTT+AGG 0.424790 2_1:+16742842 Msa0198140:CDS
CACCATATAACCAATCCAAC+TGG 0.430042 2_1:-16742908 None:intergenic
AGGTTCTTGGCAAATGGACC+GGG 0.430067 2_1:+16741843 Msa0198140:CDS
TAATGATAATATTCACATAA+AGG 0.431733 2_1:-16744347 None:intergenic
AGAAATGCAATTGCAAGAAC+AGG 0.433105 2_1:-16739557 None:intergenic
AAGGTTCTTGGCAAATGGAC+CGG 0.434194 2_1:+16741842 Msa0198140:CDS
AAAGTCCATAGGCGAAATCT+TGG 0.434354 2_1:-16739930 None:intergenic
GTACGAAAACCTTATATTAG+TGG 0.439883 2_1:+16742155 Msa0198140:CDS
TTTCTATGCTTATACTATGC+AGG 0.442358 2_1:+16740040 Msa0198140:CDS
TGATTATGGAATGTCTGGTT+TGG 0.443470 2_1:+16742787 Msa0198140:CDS
GCTTCGGTTGAGGGGCCATA+TGG 0.449802 2_1:+16741938 Msa0198140:CDS
GAAAGTATACCTTTAAAGTC+TGG 0.452123 2_1:-16743151 None:intergenic
CCTAGTGATTATGGAATGTC+TGG 0.452709 2_1:+16742782 Msa0198140:CDS
CCCCAAATGGTCCATTGATA+AGG 0.454422 2_1:-16739959 None:intergenic
AAATTCCACGTTCGCACTCC+AGG 0.454972 2_1:-16741384 None:intergenic
ATGCTGCAAAATATCATGTA+TGG 0.457558 2_1:+16741025 Msa0198140:CDS
GTGGTAACAGCTTCGGTTGA+GGG 0.460759 2_1:+16741929 Msa0198140:CDS
AGAACAGATCCCCTTGAAAT+CGG 0.461594 2_1:-16740973 None:intergenic
TTGTAGCTGGTTTGTTGATG+TGG 0.462418 2_1:+16741349 Msa0198140:CDS
GTTTCTGCAACAGAGCTCAT+TGG 0.463709 2_1:+16739984 Msa0198140:CDS
ATCTTCGGTGGTATAGTGGT+TGG 0.467954 2_1:+16742977 Msa0198140:CDS
TAGGCGAAATCTTGGATACT+TGG 0.468997 2_1:-16739922 None:intergenic
ACAGGAAACAATTTCTGGTC+TGG 0.469821 2_1:+16742815 Msa0198140:CDS
AAGTTAACTACCATACAGTA+TGG 0.471321 2_1:+16743121 Msa0198140:CDS
TTCTCCATCGTGTGAGGGAT+GGG 0.474532 2_1:+16742223 Msa0198140:CDS
ACGATAATTCCCGAACTTGA+AGG 0.476050 2_1:-16741748 None:intergenic
AGTATCCAAGATTTCGCCTA+TGG 0.476533 2_1:+16739925 Msa0198140:CDS
CACATTAAATTTCATTTCAG+TGG 0.478013 2_1:+16738858 Msa0198140:five_prime_UTR
GTTGCAGGTGTAGTTATCTT+CGG 0.483407 2_1:+16742962 Msa0198140:CDS
TGTAGCTGGTTTGTTGATGT+GGG 0.488112 2_1:+16741350 Msa0198140:CDS
CGGGATTGGATTAATGTGCT+TGG 0.488988 2_1:+16740936 Msa0198140:CDS
CGCTTCCTGGAGTGCGAACG+TGG 0.494322 2_1:+16741379 Msa0198140:CDS
GGAACTTCCTTTGGAATCAC+AGG 0.496264 2_1:+16739278 Msa0198140:CDS
GTGTTCATGGCTTTGCATAT+TGG 0.498872 2_1:+16741450 Msa0198140:CDS
TGGTTATATGGTGGTACAAA+GGG 0.499086 2_1:+16742918 Msa0198140:CDS
GGAGTTATCAGCCTTGTAGC+TGG 0.499164 2_1:+16741336 Msa0198140:CDS
TATGGAATGTCTGGTTTGGT+TGG 0.500105 2_1:+16742791 Msa0198140:CDS
AAATGGAAGATGGGGTGATA+AGG 0.501290 2_1:-16744033 None:intergenic
AAACACGTAAATATAGTAAG+TGG 0.502199 2_1:-16738970 None:intergenic
GGAAAAGCAAAGTTCTCTAA+AGG 0.503179 2_1:+16743015 Msa0198140:CDS
GAAGCTGTTACCACCGTATG+AGG 0.505127 2_1:-16741920 None:intergenic
ATTGGTGTTGCCAATCTAGC+AGG 0.509235 2_1:+16741315 Msa0198140:CDS
AGTTATCTTCGGTGGTATAG+TGG 0.510123 2_1:+16742973 Msa0198140:CDS
TATGGTACTTCGTGTCCATA+TGG 0.512922 2_1:-16741953 None:intergenic
AAGTAAGATCACAAAGCCTA+AGG 0.519858 2_1:-16742858 None:intergenic
GGTGGTAACAGCTTCGGTTG+AGG 0.520485 2_1:+16741928 Msa0198140:CDS
CACTGAAATGAAATTTAATG+TGG 0.520500 2_1:-16738857 None:intergenic
ATGTCTGGTTTGGTTGGTAC+AGG 0.521130 2_1:+16742797 Msa0198140:CDS
TTGAAGGAAAATGAAGCTTA+GGG 0.521409 2_1:-16741732 None:intergenic
GCAAAATATCATGTATGGCT+AGG 0.522260 2_1:+16741030 Msa0198140:CDS
TGAGGTTCTGCCAATCAAGA+AGG 0.523056 2_1:+16741532 Msa0198140:CDS
TATATTGTATATATAGTAGC+AGG 0.523200 2_1:+16744141 Msa0198140:three_prime_UTR
TCATACGGTGGTAACAGCTT+CGG 0.525366 2_1:+16741922 Msa0198140:CDS
AATATGATTACCTTCAACGA+AGG 0.530107 2_1:-16744533 None:intergenic
TTTATTTATACCGATTTCAA+GGG 0.530400 2_1:+16740963 Msa0198140:CDS
ATTTACTATATAAATCCAGT+TGG 0.531760 2_1:+16742893 Msa0198140:CDS
ATTCTCCATCGTGTGAGGGA+TGG 0.535286 2_1:+16742222 Msa0198140:CDS
TGGCCTAGAGCCATACTGTA+TGG 0.535994 2_1:-16743131 None:intergenic
GTTGCAGAAACAACCCCAAA+TGG 0.541339 2_1:-16739972 None:intergenic
TTTATCTGTTCAGCCTCATA+CGG 0.542802 2_1:+16741907 Msa0198140:CDS
ACTTCTTTCGACCGTTGACA+TGG 0.543973 2_1:+16742308 Msa0198140:CDS
TCACCTTTCTTAGAAAGCAA+AGG 0.544082 2_1:-16739083 None:intergenic
GACTCTTCTATGTTATTGAG+TGG 0.545334 2_1:+16741085 Msa0198140:CDS
GCAACACTTGACTGAAGAGT+TGG 0.545843 2_1:-16743976 None:intergenic
ATGACTGTGGAAATGGAAGA+TGG 0.548444 2_1:-16744043 None:intergenic
CTACCATACAGTATGGCTCT+AGG 0.555352 2_1:+16743128 Msa0198140:CDS
TGCATACCTAATTATTTCTG+GGG 0.557842 2_1:+16739586 Msa0198140:CDS
GATGTTGGTATTCTAGTTTG+TGG 0.558214 2_1:+16743949 Msa0198140:CDS
AGAAATAATTAGGTATGCAA+TGG 0.558493 2_1:-16739582 None:intergenic
ACACTTGACTGAAGAGTTGG+AGG 0.558505 2_1:-16743973 None:intergenic
TTGGTTATATGGTGGTACAA+AGG 0.558838 2_1:+16742917 Msa0198140:CDS
GGGCTAGAAGAAACACTGAA+TGG 0.559675 2_1:-16741785 None:intergenic
GAAAACCTTATATTAGTGGC+AGG 0.559997 2_1:+16742159 Msa0198140:CDS
ATACCTAATTATTTCTGGGG+AGG 0.562304 2_1:+16739589 Msa0198140:CDS
TAAATATAGTAAGTGGGAGA+AGG 0.563544 2_1:-16738963 None:intergenic
GGGAATTATCGTGGCTTCAG+TGG 0.567364 2_1:+16741759 Msa0198140:CDS
TGTTATTATCTGCAGGAAGA+GGG 0.567707 2_1:+16742716 Msa0198140:intron
CCAGACATTCCATAATCACT+AGG 0.567995 2_1:-16742782 None:intergenic
TTCAAGTTCGGGAATTATCG+TGG 0.568443 2_1:+16741750 Msa0198140:CDS
ATCTGTTCAGCCTCATACGG+TGG 0.568522 2_1:+16741910 Msa0198140:CDS
CAATAACATAGAAGAGTCCA+TGG 0.569129 2_1:-16741080 None:intergenic
AAATGGCTTAATTTCAGCAG+TGG 0.569517 2_1:+16739257 Msa0198140:CDS
TTAATCCAATCCCGCCCGAA+CGG 0.573743 2_1:-16740927 None:intergenic
AAAATATTTCTTGGTCGACA+AGG 0.574465 2_1:-16742249 None:intergenic
ACATCAACAAACCAGCTACA+AGG 0.574690 2_1:-16741347 None:intergenic
ATGTCAACGGTCGAAAGAAG+TGG 0.576179 2_1:-16742306 None:intergenic
TGTACATATCTTCGTCACTC+GGG 0.579762 2_1:+16742371 Msa0198140:CDS
TAATCACTAGGCATAGGAAA+GGG 0.580384 2_1:-16742770 None:intergenic
TTATGCTTGATCGATTTCTG+AGG 0.584264 2_1:+16741514 Msa0198140:CDS
TGACTGTGGAAATGGAAGAT+GGG 0.586819 2_1:-16744042 None:intergenic
GGATAAGTCCAATAACATCA+AGG 0.590579 2_1:+16743036 Msa0198140:CDS
TGGTAACAGCTTCGGTTGAG+GGG 0.591607 2_1:+16741930 Msa0198140:CDS
CCTTATCAATGGACCATTTG+GGG 0.593226 2_1:+16739959 Msa0198140:CDS
TCGGGAATCAGATCCTCCAT+TGG 0.593505 2_1:+16742389 Msa0198140:CDS
AATGGTCCATTGATAAGGAT+CGG 0.593738 2_1:-16739954 None:intergenic
CTCTATAAGGAACTCTGAGT+GGG 0.593858 2_1:+16744309 Msa0198140:three_prime_UTR
ATGTACATATCTTCGTCACT+CGG 0.595377 2_1:+16742370 Msa0198140:CDS
AAATGGCTCTGTGGATCACA+AGG 0.597424 2_1:+16743075 Msa0198140:CDS
ACAGATTGTTTCCATGTCAA+CGG 0.597655 2_1:-16742319 None:intergenic
ATTCCATAATCACTAGGCAT+AGG 0.598212 2_1:-16742776 None:intergenic
ACTGAAATGAAATTTAATGT+GGG 0.600368 2_1:-16738856 None:intergenic
CGATATTCTCCATCGTGTGA+GGG 0.600683 2_1:+16742218 Msa0198140:CDS
TCGCTCAATATAGCAAGGAA+AGG 0.600792 2_1:-16742198 None:intergenic
GTTATTGAGTGGCTAATGGA+AGG 0.601090 2_1:+16741096 Msa0198140:CDS
GCGATATTCTCCATCGTGTG+AGG 0.601408 2_1:+16742217 Msa0198140:CDS
ATAATCACTAGGCATAGGAA+AGG 0.604094 2_1:-16742771 None:intergenic
ATGTGGGGATAATATAGTAG+AGG 0.604376 2_1:-16738840 None:intergenic
AACACGTAAATATAGTAAGT+GGG 0.604909 2_1:-16738969 None:intergenic
ATATGATTACCTTCAACGAA+GGG 0.606366 2_1:-16744532 None:intergenic
GGTTCTTGGCAAATGGACCG+GGG 0.607531 2_1:+16741844 Msa0198140:CDS
GTGCCTTCCTTGTGGTACTG+TGG 0.609460 2_1:+16741578 Msa0198140:CDS
GAAGACATACCTTCAACCAA+TGG 0.610433 2_1:+16744105 Msa0198140:three_prime_UTR
GCTACTACTTGTAGTCTGCA+TGG 0.612275 2_1:+16742940 Msa0198140:CDS
AAGAAAGGTGATGAAACTGA+TGG 0.618638 2_1:+16739095 Msa0198140:CDS
CGTTCGCACTCCAGGAAGCG+AGG 0.620245 2_1:-16741376 None:intergenic
CAGTTGGATTGGTTATATGG+TGG 0.622983 2_1:+16742909 Msa0198140:CDS
GAATATCGCTCAATATAGCA+AGG 0.623134 2_1:-16742203 None:intergenic
GACTGTGGAAATGGAAGATG+GGG 0.624675 2_1:-16744041 None:intergenic
CGAAAGGGATATCTATGAAG+CGG 0.625285 2_1:-16740999 None:intergenic
TGTATTACCTGTGATTCCAA+AGG 0.625397 2_1:-16739285 None:intergenic
TGTGGGGATAATATAGTAGA+GGG 0.626067 2_1:-16738839 None:intergenic
CTGAAATGAAATTTAATGTG+GGG 0.626071 2_1:-16738855 None:intergenic
TTATTTATACCGATTTCAAG+GGG 0.626114 2_1:+16740964 Msa0198140:CDS
AGAGATCAAAGCTATGACTG+TGG 0.626232 2_1:-16744056 None:intergenic
TTACCATCAGAATCTGTGCA+TGG 0.626896 2_1:+16739224 Msa0198140:CDS
TCATCGAGGTGCCTTCCTTG+TGG 0.629616 2_1:+16741570 Msa0198140:CDS
GCAGGTGTAGTTATCTTCGG+TGG 0.630037 2_1:+16742965 Msa0198140:CDS
ACTCTATAAGGAACTCTGAG+TGG 0.632677 2_1:+16744308 Msa0198140:three_prime_UTR
AATCCATGCACAGATTCTGA+TGG 0.634212 2_1:-16739227 None:intergenic
AAAGTTAGACTAACCAATGG+AGG 0.635530 2_1:-16742402 None:intergenic
TTTCCACAGTACCACAAGGA+AGG 0.637164 2_1:-16741581 None:intergenic
TAAGGATCGGAAAAGTCCAT+AGG 0.639419 2_1:-16739941 None:intergenic
GTTCTTGGCAAATGGACCGG+GGG 0.642988 2_1:+16741845 Msa0198140:CDS
AGTTATCATTTAGAGCCAAG+AGG 0.648631 2_1:+16740084 Msa0198140:CDS
TTTACTTTATCAGAAAAGCG+TGG 0.652331 2_1:-16742342 None:intergenic
AACCTTATATTAGTGGCAGG+TGG 0.653585 2_1:+16742162 Msa0198140:CDS
AAATGGGGCCATGTTGATGT+TGG 0.654368 2_1:+16743934 Msa0198140:CDS
TTAAGAGAAAGAATCACTGA+AGG 0.655743 2_1:+16741869 Msa0198140:CDS
AATTGAGCAAAATGGCTCTG+TGG 0.663882 2_1:+16743066 Msa0198140:CDS
GAATCAATGTCAGAGAAATG+GGG 0.666449 2_1:+16743919 Msa0198140:CDS
GTTTCCCATCCCTCACACGA+TGG 0.667021 2_1:-16742227 None:intergenic
CTAGAATACCAACATCAACA+TGG 0.673063 2_1:-16743942 None:intergenic
ACCATTTCCACAGTACCACA+AGG 0.680934 2_1:-16741585 None:intergenic
TTCTTGGCAAATGGACCGGG+GGG 0.692411 2_1:+16741846 Msa0198140:CDS
ATGGCTAGGACACCTCACAA+TGG 0.732994 2_1:+16741044 Msa0198140:CDS
CAGTAAATGTAATCTCATCG+AGG 0.756992 2_1:+16741556 Msa0198140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTATTAGTTTATTT+GGG - chr2_1:16740251-16740270 None:intergenic 10.0%
!!! AAGAAATATTTTAATTGTTT+GGG + chr2_1:16742260-16742279 Msa0198140:CDS 10.0%
!!! AAAAAATGTCATATTTTTAT+CGG + chr2_1:16743542-16743561 Msa0198140:intron 10.0%
!! AATATTAAGGTAAAAATATG+AGG - chr2_1:16738912-16738931 None:intergenic 15.0%
!!! TTTTTACCTTAATATTATCA+TGG + chr2_1:16738916-16738935 Msa0198140:five_prime_UTR 15.0%
!!! TTTTACCTTAATATTATCAT+GGG + chr2_1:16738917-16738936 Msa0198140:five_prime_UTR 15.0%
!!! AATTTCTGAAAATAAAGAAA+TGG - chr2_1:16740125-16740144 None:intergenic 15.0%
!!! GTTTCTTTTATTAGTTTATT+TGG - chr2_1:16740252-16740271 None:intergenic 15.0%
!!! CTTTTTAATTTTTCAGTTTA+TGG - chr2_1:16740417-16740436 None:intergenic 15.0%
!! TCTTTAATAAAAACAAACTA+GGG - chr2_1:16740557-16740576 None:intergenic 15.0%
!! AAAGTTAAAACTCTTAAAAT+GGG - chr2_1:16740672-16740691 None:intergenic 15.0%
!! AAAAGTTAAAACTCTTAAAA+TGG - chr2_1:16740673-16740692 None:intergenic 15.0%
!! ATTATGTAAAGATAAGTAAA+TGG - chr2_1:16741260-16741279 None:intergenic 15.0%
!! TTACTTATCTTTACATAATT+TGG + chr2_1:16741261-16741280 Msa0198140:intron 15.0%
!! CAATAAAGATTATGTATAAT+TGG - chr2_1:16741431-16741450 None:intergenic 15.0%
!! CAAACAATTAAAATATTTCT+TGG - chr2_1:16742261-16742280 None:intergenic 15.0%
!!! CAAGAAATATTTTAATTGTT+TGG + chr2_1:16742259-16742278 Msa0198140:CDS 15.0%
!! TAATGATAATATTCACATAA+AGG - chr2_1:16744350-16744369 None:intergenic 15.0%
!! AAAGAAAAACAAGTTTATAA+GGG - chr2_1:16744406-16744425 None:intergenic 15.0%
!! TAAAGAAAAACAAGTTTATA+AGG - chr2_1:16744407-16744426 None:intergenic 15.0%
!! AATAATATGTGCTTATAATT+TGG - chr2_1:16744443-16744462 None:intergenic 15.0%
!! ACTGAAATGAAATTTAATGT+GGG - chr2_1:16738859-16738878 None:intergenic 20.0%
!! TTTCCATAATCTTCATTATA+TGG + chr2_1:16739183-16739202 Msa0198140:CDS 20.0%
!! TTCCATAATCTTCATTATAT+GGG + chr2_1:16739184-16739203 Msa0198140:CDS 20.0%
!!! GAAATTAATTCGAGTTTAAT+TGG - chr2_1:16739839-16739858 None:intergenic 20.0%
!!! TTTTGATATTGTTTTTGACA+TGG + chr2_1:16739875-16739894 Msa0198140:intron 20.0%
!!! TTTTTTTGGCATATGTTATT+TGG + chr2_1:16740015-16740034 Msa0198140:CDS 20.0%
!!! TTTTTTGGCATATGTTATTT+GGG + chr2_1:16740016-16740035 Msa0198140:CDS 20.0%
!!! ATGCAAATTACTTTGTTTAA+TGG + chr2_1:16740154-16740173 Msa0198140:intron 20.0%
!! TAAAGAAAAAAATTCATGCA+TGG - chr2_1:16740180-16740199 None:intergenic 20.0%
!! ATTCCAATATGAATTGAAAT+TGG + chr2_1:16740317-16740336 Msa0198140:intron 20.0%
!! CTCTTTAATAAAAACAAACT+AGG - chr2_1:16740558-16740577 None:intergenic 20.0%
!! AAGTTAAAACTCTTAAAATG+GGG - chr2_1:16740671-16740690 None:intergenic 20.0%
!!! AAAAATCAATTTGAAGCAAA+AGG - chr2_1:16740733-16740752 None:intergenic 20.0%
!! ATATGATAAGTTAATTTACC+TGG + chr2_1:16740857-16740876 Msa0198140:intron 20.0%
!!! TTTTATTTATACCGATTTCA+AGG + chr2_1:16740962-16740981 Msa0198140:CDS 20.0%
!!! TTTATTTATACCGATTTCAA+GGG + chr2_1:16740963-16740982 Msa0198140:CDS 20.0%
!! TTATTAGAATGGAAAGATAT+TGG + chr2_1:16741297-16741316 Msa0198140:CDS 20.0%
!! TCAAGCATAAAAAGAAATAT+TGG - chr2_1:16741504-16741523 None:intergenic 20.0%
!! ATTTACTATATAAATCCAGT+TGG + chr2_1:16742893-16742912 Msa0198140:CDS 20.0%
!! TCTTAATATCAATACATGAA+AGG + chr2_1:16743198-16743217 Msa0198140:intron 20.0%
!! ATGATTCATAAGAATGAATT+GGG - chr2_1:16743370-16743389 None:intergenic 20.0%
!! AATGATTCATAAGAATGAAT+TGG - chr2_1:16743371-16743390 None:intergenic 20.0%
!!! ATAGTAAGATACTTTTTTTG+TGG + chr2_1:16743432-16743451 Msa0198140:intron 20.0%
!! TATATTGTATATATAGTAGC+AGG + chr2_1:16744141-16744160 Msa0198140:three_prime_UTR 20.0%
!!! AATATTTTGCACTTGTAATA+TGG + chr2_1:16744203-16744222 Msa0198140:three_prime_UTR 20.0%
! CTGAAATGAAATTTAATGTG+GGG - chr2_1:16738858-16738877 None:intergenic 25.0%
! CACTGAAATGAAATTTAATG+TGG - chr2_1:16738860-16738879 None:intergenic 25.0%
! CACATTAAATTTCATTTCAG+TGG + chr2_1:16738858-16738877 Msa0198140:five_prime_UTR 25.0%
! TGAGGATCATAAAAAATGTT+GGG - chr2_1:16738894-16738913 None:intergenic 25.0%
! ATGAGGATCATAAAAAATGT+TGG - chr2_1:16738895-16738914 None:intergenic 25.0%
! AACACGTAAATATAGTAAGT+GGG - chr2_1:16738972-16738991 None:intergenic 25.0%
! AAACACGTAAATATAGTAAG+TGG - chr2_1:16738973-16738992 None:intergenic 25.0%
!!! TGATTTCTTGCTTTTTGTTT+TGG + chr2_1:16739326-16739345 Msa0198140:intron 25.0%
!!! AATCTTGTTTTTTCACTATG+TGG + chr2_1:16739471-16739490 Msa0198140:intron 25.0%
! AGAAATAATTAGGTATGCAA+TGG - chr2_1:16739585-16739604 None:intergenic 25.0%
! ATTGCATACCTAATTATTTC+TGG + chr2_1:16739584-16739603 Msa0198140:CDS 25.0%
!! TTGCATACCTAATTATTTCT+GGG + chr2_1:16739585-16739604 Msa0198140:CDS 25.0%
! ATTAATCCAATGTACAGATA+CGG - chr2_1:16739650-16739669 None:intergenic 25.0%
! ACATACTAATGAAACATGAT+TGG - chr2_1:16739708-16739727 None:intergenic 25.0%
! TAGTTCCTAAAATATCTCTT+CGG + chr2_1:16739741-16739760 Msa0198140:intron 25.0%
!!! CATTGGAATTGTCATTTTTT+TGG + chr2_1:16740001-16740020 Msa0198140:CDS 25.0%
!!! TAATTTTTCAGTTTATGGAG+AGG - chr2_1:16740412-16740431 None:intergenic 25.0%
! AGAAAAATATTTGCAAACTC+TGG - chr2_1:16740510-16740529 None:intergenic 25.0%
! TTAAAACAAGAATCTTGACA+TGG + chr2_1:16740691-16740710 Msa0198140:intron 25.0%
! AAATTACATGATCATTGCAA+AGG - chr2_1:16740824-16740843 None:intergenic 25.0%
! GAAAAAAAGTTAAGTAAACC+AGG - chr2_1:16740878-16740897 None:intergenic 25.0%
!!! TTATTTATACCGATTTCAAG+GGG + chr2_1:16740964-16740983 Msa0198140:CDS 25.0%
! CATAATCTTTATTGTGTTCA+TGG + chr2_1:16741437-16741456 Msa0198140:CDS 25.0%
! AAATAAGTACACTTACTTTG+TGG - chr2_1:16741621-16741640 None:intergenic 25.0%
! TATATTGTCACTGTTACATA+TGG - chr2_1:16741681-16741700 None:intergenic 25.0%
!!! TGTGATTTTTTCCATCTAAA+GGG - chr2_1:16741808-16741827 None:intergenic 25.0%
!!! ATGTGATTTTTTCCATCTAA+AGG - chr2_1:16741809-16741828 None:intergenic 25.0%
!! AGTTAGCTTAAAATCTACTT+TGG - chr2_1:16742068-16742087 None:intergenic 25.0%
!! TGTGTTCATTTTGTTCTATT+AGG + chr2_1:16742133-16742152 Msa0198140:intron 25.0%
! CCTTTCTATTATTCAAAGTT+AGG - chr2_1:16742550-16742569 None:intergenic 25.0%
! CCTAACTTTGAATAATAGAA+AGG + chr2_1:16742547-16742566 Msa0198140:intron 25.0%
!!! CTTTTGAATGTTTAAAACCA+CGG + chr2_1:16742665-16742684 Msa0198140:intron 25.0%
!! ATTTGATTGTTATTATCTGC+AGG + chr2_1:16742709-16742728 Msa0198140:intron 25.0%
! TTTATCAACCTTGATGTTAT+TGG - chr2_1:16743047-16743066 None:intergenic 25.0%
!! GTTGATAAAATTGAGCAAAA+TGG + chr2_1:16743058-16743077 Msa0198140:CDS 25.0%
!! TTGTGAATCGAATTTTACTA+TGG - chr2_1:16743584-16743603 None:intergenic 25.0%
! GTAAAATTCGATTCACAATT+TGG + chr2_1:16743586-16743605 Msa0198140:intron 25.0%
!! AGTACCTTTTTATCTTACAA+TGG - chr2_1:16744273-16744292 None:intergenic 25.0%
!! AAGGTACTATAATCCTTAAA+AGG + chr2_1:16744285-16744304 Msa0198140:three_prime_UTR 25.0%
! AAACAAGTTTATAAGGGTTA+TGG - chr2_1:16744400-16744419 None:intergenic 25.0%
TGGAACCCATGATAATATTA+AGG - chr2_1:16738925-16738944 None:intergenic 30.0%
GGAAAAAGATGAAAACATTG+TGG - chr2_1:16738945-16738964 None:intergenic 30.0%
TAAATATAGTAAGTGGGAGA+AGG - chr2_1:16738966-16738985 None:intergenic 30.0%
TGAGTCATTTCTTGTAACTA+TGG + chr2_1:16739037-16739056 Msa0198140:exon 30.0%
AGCCCATATAATGAAGATTA+TGG - chr2_1:16739189-16739208 None:intergenic 30.0%
!!! CTTGCTTTTTGTTTTGGTTT+TGG + chr2_1:16739332-16739351 Msa0198140:intron 30.0%
!! TGCATACCTAATTATTTCTG+GGG + chr2_1:16739586-16739605 Msa0198140:CDS 30.0%
TATGTAGAAATCACATACTC+AGG - chr2_1:16739623-16739642 None:intergenic 30.0%
TGATTGGATATTTACACTGA+CGG - chr2_1:16739692-16739711 None:intergenic 30.0%
! GATATCCGAAGAGATATTTT+AGG - chr2_1:16739749-16739768 None:intergenic 30.0%
! GTTTTTGACATGGATTTTGA+TGG + chr2_1:16739885-16739904 Msa0198140:intron 30.0%
TTTCTATGCTTATACTATGC+AGG + chr2_1:16740040-16740059 Msa0198140:CDS 30.0%
TAGTGAGATTAAGATAACAC+TGG + chr2_1:16740285-16740304 Msa0198140:intron 30.0%
CCTCCAATTTCAATTCATAT+TGG - chr2_1:16740323-16740342 None:intergenic 30.0%
CCAATATGAATTGAAATTGG+AGG + chr2_1:16740320-16740339 Msa0198140:intron 30.0%
GCATAGAAGTCTCAAAATTT+GGG - chr2_1:16740453-16740472 None:intergenic 30.0%
AGCATAGAAGTCTCAAAATT+TGG - chr2_1:16740454-16740473 None:intergenic 30.0%
TTTATTAAAGAGTCCCACAT+CGG + chr2_1:16740566-16740585 Msa0198140:intron 30.0%
TCTGAACACGTGTTTATAAA+TGG + chr2_1:16740601-16740620 Msa0198140:intron 30.0%
CTGAACACGTGTTTATAAAT+GGG + chr2_1:16740602-16740621 Msa0198140:intron 30.0%
TGAACACGTGTTTATAAATG+GGG + chr2_1:16740603-16740622 Msa0198140:intron 30.0%
! TTGCACATGTTGGAAATTTT+GGG + chr2_1:16740901-16740920 Msa0198140:CDS 30.0%
ATGCTGCAAAATATCATGTA+TGG + chr2_1:16741025-16741044 Msa0198140:CDS 30.0%
TGTTATCCTAAATCCTTCAA+AGG + chr2_1:16741202-16741221 Msa0198140:intron 30.0%
TAATCAACAACTACCTTTGA+AGG - chr2_1:16741218-16741237 None:intergenic 30.0%
! CAAAGGTAGTTGTTGATTAT+TGG + chr2_1:16741219-16741238 Msa0198140:intron 30.0%
TCCATTCTAATAACTGCAAA+GGG - chr2_1:16741290-16741309 None:intergenic 30.0%
TTCCATTCTAATAACTGCAA+AGG - chr2_1:16741291-16741310 None:intergenic 30.0%
TTGAAGGAAAATGAAGCTTA+GGG - chr2_1:16741735-16741754 None:intergenic 30.0%
! TCACATTGCTGTTCTTATTA+AGG + chr2_1:16741823-16741842 Msa0198140:CDS 30.0%
TTATTAAGGTTCTTGGCAAA+TGG + chr2_1:16741837-16741856 Msa0198140:CDS 30.0%
TTAAGAGAAAGAATCACTGA+AGG + chr2_1:16741869-16741888 Msa0198140:CDS 30.0%
GTACGAAAACCTTATATTAG+TGG + chr2_1:16742155-16742174 Msa0198140:CDS 30.0%
AAAATATTTCTTGGTCGACA+AGG - chr2_1:16742252-16742271 None:intergenic 30.0%
TTTACTTTATCAGAAAAGCG+TGG - chr2_1:16742345-16742364 None:intergenic 30.0%
TAGAAAGTTAGACTAACCAA+TGG - chr2_1:16742408-16742427 None:intergenic 30.0%
!! TTTCTTCGATTTGTGTCTTT+TGG + chr2_1:16742443-16742462 Msa0198140:intron 30.0%
! TATGTCATTTCATCTACCTT+AGG + chr2_1:16742842-16742861 Msa0198140:CDS 30.0%
CTATATAAATCCAGTTGGAT+TGG + chr2_1:16742898-16742917 Msa0198140:CDS 30.0%
AAGTTAACTACCATACAGTA+TGG + chr2_1:16743121-16743140 Msa0198140:CDS 30.0%
!! GAAAGTATACCTTTAAAGTC+TGG - chr2_1:16743154-16743173 None:intergenic 30.0%
ATCAAATCGATATGAATCTC+TGG + chr2_1:16743288-16743307 Msa0198140:intron 30.0%
! TTTTATCGGTAGTGTATCTT+AGG + chr2_1:16743556-16743575 Msa0198140:intron 30.0%
CGATTCACAATTTGGAAATT+TGG + chr2_1:16743594-16743613 Msa0198140:intron 30.0%
TGTAAAAAAGGGACTAATAC+TGG - chr2_1:16743851-16743870 None:intergenic 30.0%
!!! TTAGTCCCTTTTTTACAATG+TGG + chr2_1:16743854-16743873 Msa0198140:intron 30.0%
CTCTTCCACATTGTAAAAAA+GGG - chr2_1:16743862-16743881 None:intergenic 30.0%
TTGAATCAATGTCAGAGAAA+TGG + chr2_1:16743917-16743936 Msa0198140:CDS 30.0%
TGAATCAATGTCAGAGAAAT+GGG + chr2_1:16743918-16743937 Msa0198140:CDS 30.0%
! CTCTAGCTTCATTTCTTTAA+TGG + chr2_1:16744075-16744094 Msa0198140:exon 30.0%
! ATATATGCATGCTTTTCCAT+TGG - chr2_1:16744124-16744143 None:intergenic 30.0%
CAGTCCATTGTAAGATAAAA+AGG + chr2_1:16744266-16744285 Msa0198140:three_prime_UTR 30.0%
ATCCTTAAAAGGACTCTATA+AGG + chr2_1:16744296-16744315 Msa0198140:three_prime_UTR 30.0%
! TTCCTTATAGAGTCCTTTTA+AGG - chr2_1:16744301-16744320 None:intergenic 30.0%
ATATGATTACCTTCAACGAA+GGG - chr2_1:16744535-16744554 None:intergenic 30.0%
AATATGATTACCTTCAACGA+AGG - chr2_1:16744536-16744555 None:intergenic 30.0%
TGTGGGGATAATATAGTAGA+GGG - chr2_1:16738842-16738861 None:intergenic 35.0%
ATGTGGGGATAATATAGTAG+AGG - chr2_1:16738843-16738862 None:intergenic 35.0%
! AGTCCTTTGCTTTCTAAGAA+AGG + chr2_1:16739080-16739099 Msa0198140:CDS 35.0%
TCACCTTTCTTAGAAAGCAA+AGG - chr2_1:16739086-16739105 None:intergenic 35.0%
AAGAAAGGTGATGAAACTGA+TGG + chr2_1:16739095-16739114 Msa0198140:CDS 35.0%
GTAGCTGACACAACAAAATT+AGG - chr2_1:16739140-16739159 None:intergenic 35.0%
TTGTTGTGTCAGCTACTAAA+TGG + chr2_1:16739144-16739163 Msa0198140:CDS 35.0%
! TGCATGGATTGTTCACAAAA+TGG + chr2_1:16739240-16739259 Msa0198140:CDS 35.0%
AAATGGCTTAATTTCAGCAG+TGG + chr2_1:16739257-16739276 Msa0198140:CDS 35.0%
TGTATTACCTGTGATTCCAA+AGG - chr2_1:16739288-16739307 None:intergenic 35.0%
AGAAATGCAATTGCAAGAAC+AGG - chr2_1:16739560-16739579 None:intergenic 35.0%
!! ATACCTAATTATTTCTGGGG+AGG + chr2_1:16739589-16739608 Msa0198140:CDS 35.0%
TACTTTCCGTATCTGTACAT+TGG + chr2_1:16739641-16739660 Msa0198140:intron 35.0%
! ACTTTTCCGATCCTTATCAA+TGG + chr2_1:16739948-16739967 Msa0198140:CDS 35.0%
AATGGTCCATTGATAAGGAT+CGG - chr2_1:16739957-16739976 None:intergenic 35.0%
ATCCTTATCAATGGACCATT+TGG + chr2_1:16739957-16739976 Msa0198140:CDS 35.0%
TCCTTATCAATGGACCATTT+GGG + chr2_1:16739958-16739977 Msa0198140:CDS 35.0%
! AGTTATCATTTAGAGCCAAG+AGG + chr2_1:16740084-16740103 Msa0198140:CDS 35.0%
TTCTAAACTGTAGTACCTCT+TGG - chr2_1:16740102-16740121 None:intergenic 35.0%
TTGACAGTGCTTATTAACCA+CGG + chr2_1:16740378-16740397 Msa0198140:intron 35.0%
!!! ATTTTGAGACTTCTATGCTG+AGG + chr2_1:16740455-16740474 Msa0198140:intron 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + chr2_1:16740645-16740664 Msa0198140:intron 35.0%
GTCGGTAATACTTAAGACAA+AGG - chr2_1:16740757-16740776 None:intergenic 35.0%
TCCATGCTAATGACTATTGT+CGG - chr2_1:16740775-16740794 None:intergenic 35.0%
!!! TTTTTTCAGCTTGCACATGT+TGG + chr2_1:16740891-16740910 Msa0198140:intron 35.0%
! CTTGCACATGTTGGAAATTT+TGG + chr2_1:16740900-16740919 Msa0198140:CDS 35.0%
! ATTTTGCAGCATGTTCGAAA+GGG - chr2_1:16741017-16741036 None:intergenic 35.0%
! TATTTTGCAGCATGTTCGAA+AGG - chr2_1:16741018-16741037 None:intergenic 35.0%
GCAAAATATCATGTATGGCT+AGG + chr2_1:16741030-16741049 Msa0198140:CDS 35.0%
GAGTAAAAATCACCATTGTG+AGG - chr2_1:16741059-16741078 None:intergenic 35.0%
! ATGGTGATTTTTACTCTCCA+TGG + chr2_1:16741063-16741082 Msa0198140:CDS 35.0%
CAATAACATAGAAGAGTCCA+TGG - chr2_1:16741083-16741102 None:intergenic 35.0%
GACTCTTCTATGTTATTGAG+TGG + chr2_1:16741085-16741104 Msa0198140:CDS 35.0%
CTATGTTATTGAGTGGCTAA+TGG + chr2_1:16741092-16741111 Msa0198140:CDS 35.0%
GAAGACTCACTTCTTGAATT+AGG - chr2_1:16741125-16741144 None:intergenic 35.0%
! CAACTACCTTTGAAGGATTT+AGG - chr2_1:16741211-16741230 None:intergenic 35.0%
CATTCTAATAACTGCAAAGG+GGG - chr2_1:16741288-16741307 None:intergenic 35.0%
CCATTCTAATAACTGCAAAG+GGG - chr2_1:16741289-16741308 None:intergenic 35.0%
!!! TGGCGACTTTATTTTTGCTA+TGG + chr2_1:16741470-16741489 Msa0198140:CDS 35.0%
!!! TTTATTTTTGCTATGGCTGC+TGG + chr2_1:16741477-16741496 Msa0198140:CDS 35.0%
! TTATGCTTGATCGATTTCTG+AGG + chr2_1:16741514-16741533 Msa0198140:CDS 35.0%
CATTTACTGTCCTTCTTGAT+TGG - chr2_1:16741545-16741564 None:intergenic 35.0%
CAGTAAATGTAATCTCATCG+AGG + chr2_1:16741556-16741575 Msa0198140:CDS 35.0%
CTTGAAGGAAAATGAAGCTT+AGG - chr2_1:16741736-16741755 None:intergenic 35.0%
!! GCTTCATTTTCCTTCAAGTT+CGG + chr2_1:16741738-16741757 Msa0198140:CDS 35.0%
!! CTTCATTTTCCTTCAAGTTC+GGG + chr2_1:16741739-16741758 Msa0198140:CDS 35.0%
GCTGTTCTTATTAAGGTTCT+TGG + chr2_1:16741830-16741849 Msa0198140:CDS 35.0%
TTTATCTGTTCAGCCTCATA+CGG + chr2_1:16741907-16741926 Msa0198140:CDS 35.0%
ACCATATCACTTGATGTAAG+TGG + chr2_1:16741970-16741989 Msa0198140:intron 35.0%
GAAAACCTTATATTAGTGGC+AGG + chr2_1:16742159-16742178 Msa0198140:CDS 35.0%
GAATATCGCTCAATATAGCA+AGG - chr2_1:16742206-16742225 None:intergenic 35.0%
ACAGATTGTTTCCATGTCAA+CGG - chr2_1:16742322-16742341 None:intergenic 35.0%
ATGTACATATCTTCGTCACT+CGG + chr2_1:16742370-16742389 Msa0198140:CDS 35.0%
AAAGTTAGACTAACCAATGG+AGG - chr2_1:16742405-16742424 None:intergenic 35.0%
! TTGTTATTATCTGCAGGAAG+AGG + chr2_1:16742715-16742734 Msa0198140:intron 35.0%
TGTTATTATCTGCAGGAAGA+GGG + chr2_1:16742716-16742735 Msa0198140:intron 35.0%
! AAGGGACAGAGTGATTTTAT+TGG - chr2_1:16742755-16742774 None:intergenic 35.0%
TAATCACTAGGCATAGGAAA+GGG - chr2_1:16742773-16742792 None:intergenic 35.0%
ATAATCACTAGGCATAGGAA+AGG - chr2_1:16742774-16742793 None:intergenic 35.0%
TTTCCTATGCCTAGTGATTA+TGG + chr2_1:16742773-16742792 Msa0198140:CDS 35.0%
ATTCCATAATCACTAGGCAT+AGG - chr2_1:16742779-16742798 None:intergenic 35.0%
TGATTATGGAATGTCTGGTT+TGG + chr2_1:16742787-16742806 Msa0198140:CDS 35.0%
TTGGTACAGGAAACAATTTC+TGG + chr2_1:16742810-16742829 Msa0198140:CDS 35.0%
AAGTAAGATCACAAAGCCTA+AGG - chr2_1:16742861-16742880 None:intergenic 35.0%
!! ATCCAGTTGGATTGGTTATA+TGG + chr2_1:16742906-16742925 Msa0198140:CDS 35.0%
TTGGTTATATGGTGGTACAA+AGG + chr2_1:16742917-16742936 Msa0198140:CDS 35.0%
TGGTTATATGGTGGTACAAA+GGG + chr2_1:16742918-16742937 Msa0198140:CDS 35.0%
GGAAAAGCAAAGTTCTCTAA+AGG + chr2_1:16743015-16743034 Msa0198140:CDS 35.0%
GGATAAGTCCAATAACATCA+AGG + chr2_1:16743036-16743055 Msa0198140:CDS 35.0%
TGTCTGACTACACTAAGTTT+AGG - chr2_1:16743395-16743414 None:intergenic 35.0%
CGATTCACGATTTGAAAAGT+AGG + chr2_1:16743698-16743717 Msa0198140:intron 35.0%
TGAATCACTTATCATGAGCT+TGG + chr2_1:16743760-16743779 Msa0198140:intron 35.0%
CCTCTTCCACATTGTAAAAA+AGG - chr2_1:16743863-16743882 None:intergenic 35.0%
!!! CCTTTTTTACAATGTGGAAG+AGG + chr2_1:16743860-16743879 Msa0198140:intron 35.0%
TGTGGAAGAGGTTACTAATA+TGG + chr2_1:16743872-16743891 Msa0198140:intron 35.0%
GAATCAATGTCAGAGAAATG+GGG + chr2_1:16743919-16743938 Msa0198140:CDS 35.0%
CTAGAATACCAACATCAACA+TGG - chr2_1:16743945-16743964 None:intergenic 35.0%
!! GATGTTGGTATTCTAGTTTG+TGG + chr2_1:16743949-16743968 Msa0198140:CDS 35.0%
! CAGCTACTAAATGGACTCTT+AGG + chr2_1:16739153-16739172 Msa0198140:CDS 40.0%
TTACCATCAGAATCTGTGCA+TGG + chr2_1:16739224-16739243 Msa0198140:CDS 40.0%
AATCCATGCACAGATTCTGA+TGG - chr2_1:16739230-16739249 None:intergenic 40.0%
AAACTACTTGTGTGTTGTGC+AGG + chr2_1:16739509-16739528 Msa0198140:intron 40.0%
GATCCTCCCCAGAAATAATT+AGG - chr2_1:16739595-16739614 None:intergenic 40.0%
!! TTGACATGGATTTTGATGGC+AGG + chr2_1:16739889-16739908 Msa0198140:intron 40.0%
TAGGCGAAATCTTGGATACT+TGG - chr2_1:16739925-16739944 None:intergenic 40.0%
AGTATCCAAGATTTCGCCTA+TGG + chr2_1:16739925-16739944 Msa0198140:CDS 40.0%
AAAGTCCATAGGCGAAATCT+TGG - chr2_1:16739933-16739952 None:intergenic 40.0%
TAAGGATCGGAAAAGTCCAT+AGG - chr2_1:16739944-16739963 None:intergenic 40.0%
CCTTATCAATGGACCATTTG+GGG + chr2_1:16739959-16739978 Msa0198140:CDS 40.0%
AACCTCTTGAAACCAGTCTT+TGG + chr2_1:16740199-16740218 Msa0198140:intron 40.0%
!! TACCAAAGACTGGTTTCAAG+AGG - chr2_1:16740204-16740223 None:intergenic 40.0%
AACCAGTCTTTGGTACGTTA+AGG + chr2_1:16740209-16740228 Msa0198140:intron 40.0%
TTCCTTAACGTACCAAAGAC+TGG - chr2_1:16740214-16740233 None:intergenic 40.0%
CAGTTTATGGAGAGGATTGT+TGG - chr2_1:16740404-16740423 None:intergenic 40.0%
! AGCCATATTTTGTCCGATGT+GGG - chr2_1:16740582-16740601 None:intergenic 40.0%
ACCGACAATAGTCATTAGCA+TGG + chr2_1:16740771-16740790 Msa0198140:intron 40.0%
AGAACAGATCCCCTTGAAAT+CGG - chr2_1:16740976-16740995 None:intergenic 40.0%
CGAAAGGGATATCTATGAAG+CGG - chr2_1:16741002-16741021 None:intergenic 40.0%
GTTATTGAGTGGCTAATGGA+AGG + chr2_1:16741096-16741115 Msa0198140:CDS 40.0%
CCCCTTTGCAGTTATTAGAA+TGG + chr2_1:16741286-16741305 Msa0198140:intron 40.0%
ACATCAACAAACCAGCTACA+AGG - chr2_1:16741350-16741369 None:intergenic 40.0%
!! TTGTAGCTGGTTTGTTGATG+TGG + chr2_1:16741349-16741368 Msa0198140:CDS 40.0%
!! TGTAGCTGGTTTGTTGATGT+GGG + chr2_1:16741350-16741369 Msa0198140:CDS 40.0%
! GTGTTCATGGCTTTGCATAT+TGG + chr2_1:16741450-16741469 Msa0198140:CDS 40.0%
ACGATAATTCCCGAACTTGA+AGG - chr2_1:16741751-16741770 None:intergenic 40.0%
! TTCAAGTTCGGGAATTATCG+TGG + chr2_1:16741750-16741769 Msa0198140:CDS 40.0%
GTTTCTTCTAGCCCTTTAGA+TGG + chr2_1:16741794-16741813 Msa0198140:CDS 40.0%
TATGGTACTTCGTGTCCATA+TGG - chr2_1:16741956-16741975 None:intergenic 40.0%
GCCACTTACATCAAGTGATA+TGG - chr2_1:16741974-16741993 None:intergenic 40.0%
AACCTTATATTAGTGGCAGG+TGG + chr2_1:16742162-16742181 Msa0198140:CDS 40.0%
TACCACCTGCCACTAATATA+AGG - chr2_1:16742167-16742186 None:intergenic 40.0%
ATATTAGTGGCAGGTGGTAT+TGG + chr2_1:16742168-16742187 Msa0198140:CDS 40.0%
TCGCTCAATATAGCAAGGAA+AGG - chr2_1:16742201-16742220 None:intergenic 40.0%
TGTACATATCTTCGTCACTC+GGG + chr2_1:16742371-16742390 Msa0198140:CDS 40.0%
! ATGTTTAAAACCACGGTCGT+CGG + chr2_1:16742672-16742691 Msa0198140:intron 40.0%
CCAGACATTCCATAATCACT+AGG - chr2_1:16742785-16742804 None:intergenic 40.0%
CCTAGTGATTATGGAATGTC+TGG + chr2_1:16742782-16742801 Msa0198140:CDS 40.0%
!! TATGGAATGTCTGGTTTGGT+TGG + chr2_1:16742791-16742810 Msa0198140:CDS 40.0%
!! ACAGGAAACAATTTCTGGTC+TGG + chr2_1:16742815-16742834 Msa0198140:CDS 40.0%
CACCATATAACCAATCCAAC+TGG - chr2_1:16742911-16742930 None:intergenic 40.0%
!! CAGTTGGATTGGTTATATGG+TGG + chr2_1:16742909-16742928 Msa0198140:CDS 40.0%
GTTGCAGGTGTAGTTATCTT+CGG + chr2_1:16742962-16742981 Msa0198140:CDS 40.0%
AGTTATCTTCGGTGGTATAG+TGG + chr2_1:16742973-16742992 Msa0198140:CDS 40.0%
! GTGGTATAGTGGTTGGATTT+TGG + chr2_1:16742984-16743003 Msa0198140:CDS 40.0%
!! TGGTTGGATTTTGGCATATG+TGG + chr2_1:16742993-16743012 Msa0198140:CDS 40.0%
!! GGTTGGATTTTGGCATATGT+GGG + chr2_1:16742994-16743013 Msa0198140:CDS 40.0%
! AATTGAGCAAAATGGCTCTG+TGG + chr2_1:16743066-16743085 Msa0198140:CDS 40.0%
TGGGATTCACCATAGAGAAT+CGG - chr2_1:16743351-16743370 None:intergenic 40.0%
CGCAAAATAAGCTCAAAGCA+AGG - chr2_1:16743655-16743674 None:intergenic 40.0%
! CAAGTGTTGCACAAGAAATC+AGG + chr2_1:16743989-16744008 Msa0198140:CDS 40.0%
AAATGGAAGATGGGGTGATA+AGG - chr2_1:16744036-16744055 None:intergenic 40.0%
TGACTGTGGAAATGGAAGAT+GGG - chr2_1:16744045-16744064 None:intergenic 40.0%
ATGACTGTGGAAATGGAAGA+TGG - chr2_1:16744046-16744065 None:intergenic 40.0%
CAAAGCTATGACTGTGGAAA+TGG - chr2_1:16744053-16744072 None:intergenic 40.0%
AGAGATCAAAGCTATGACTG+TGG - chr2_1:16744059-16744078 None:intergenic 40.0%
GAAGACATACCTTCAACCAA+TGG + chr2_1:16744105-16744124 Msa0198140:three_prime_UTR 40.0%
!! CATGCTTTTCCATTGGTTGA+AGG - chr2_1:16744117-16744136 None:intergenic 40.0%
ACTCTATAAGGAACTCTGAG+TGG + chr2_1:16744308-16744327 Msa0198140:three_prime_UTR 40.0%
CTCTATAAGGAACTCTGAGT+GGG + chr2_1:16744309-16744328 Msa0198140:three_prime_UTR 40.0%
CTATATGTTCCCTTCGTTGA+AGG + chr2_1:16744523-16744542 Msa0198140:three_prime_UTR 40.0%
TTCAGCAGTGGAACTTCCTT+TGG + chr2_1:16739269-16739288 Msa0198140:CDS 45.0%
!! GGAACTTCCTTTGGAATCAC+AGG + chr2_1:16739278-16739297 Msa0198140:CDS 45.0%
CCCCAAATGGTCCATTGATA+AGG - chr2_1:16739962-16739981 None:intergenic 45.0%
GTTGCAGAAACAACCCCAAA+TGG - chr2_1:16739975-16739994 None:intergenic 45.0%
GTTTCTGCAACAGAGCTCAT+TGG + chr2_1:16739984-16740003 Msa0198140:CDS 45.0%
GTCCCACATCGGACAAAATA+TGG + chr2_1:16740577-16740596 Msa0198140:intron 45.0%
! GAGCCATATTTTGTCCGATG+TGG - chr2_1:16740583-16740602 None:intergenic 45.0%
CCTTACAAAACCAGCTTGTG+AGG - chr2_1:16740638-16740657 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+AGG + chr2_1:16740635-16740654 Msa0198140:intron 45.0%
!!! GGAAATTTTGGGACTCCGTT+CGG + chr2_1:16740912-16740931 Msa0198140:CDS 45.0%
!!! GAAATTTTGGGACTCCGTTC+GGG + chr2_1:16740913-16740932 Msa0198140:CDS 45.0%
CGGGATTGGATTAATGTGCT+TGG + chr2_1:16740936-16740955 Msa0198140:CDS 45.0%
!! ATTGGTGTTGCCAATCTAGC+AGG + chr2_1:16741315-16741334 Msa0198140:CDS 45.0%
GCTGATAACTCCTGCTAGAT+TGG - chr2_1:16741328-16741347 None:intergenic 45.0%
TGAGGTTCTGCCAATCAAGA+AGG + chr2_1:16741532-16741551 Msa0198140:CDS 45.0%
TTTCCACAGTACCACAAGGA+AGG - chr2_1:16741584-16741603 None:intergenic 45.0%
TCCTTGTGGTACTGTGGAAA+TGG + chr2_1:16741584-16741603 Msa0198140:CDS 45.0%
ACCATTTCCACAGTACCACA+AGG - chr2_1:16741588-16741607 None:intergenic 45.0%
GGGCTAGAAGAAACACTGAA+TGG - chr2_1:16741788-16741807 None:intergenic 45.0%
AAGGTTCTTGGCAAATGGAC+CGG + chr2_1:16741842-16741861 Msa0198140:CDS 45.0%
GATTCTTTCTCTTAACCCCC+CGG - chr2_1:16741864-16741883 None:intergenic 45.0%
TCATACGGTGGTAACAGCTT+CGG + chr2_1:16741922-16741941 Msa0198140:CDS 45.0%
CGATATTCTCCATCGTGTGA+GGG + chr2_1:16742218-16742237 Msa0198140:CDS 45.0%
ATGTCAACGGTCGAAAGAAG+TGG - chr2_1:16742309-16742328 None:intergenic 45.0%
ACTTCTTTCGACCGTTGACA+TGG + chr2_1:16742308-16742327 Msa0198140:CDS 45.0%
GTCGTAGATGTAGGCACAAT+TGG + chr2_1:16742591-16742610 Msa0198140:intron 45.0%
!! ATGTCTGGTTTGGTTGGTAC+AGG + chr2_1:16742797-16742816 Msa0198140:CDS 45.0%
GCTACTACTTGTAGTCTGCA+TGG + chr2_1:16742940-16742959 Msa0198140:CDS 45.0%
ATCTTCGGTGGTATAGTGGT+TGG + chr2_1:16742977-16742996 Msa0198140:CDS 45.0%
! AAATGGCTCTGTGGATCACA+AGG + chr2_1:16743075-16743094 Msa0198140:CDS 45.0%
CTACCATACAGTATGGCTCT+AGG + chr2_1:16743128-16743147 Msa0198140:CDS 45.0%
TCTTGAGTCCCGATTCTCTA+TGG + chr2_1:16743339-16743358 Msa0198140:intron 45.0%
GGGATTCACCATAGAGAATC+GGG - chr2_1:16743350-16743369 None:intergenic 45.0%
AAATGGGGCCATGTTGATGT+TGG + chr2_1:16743934-16743953 Msa0198140:CDS 45.0%
ACACTTGACTGAAGAGTTGG+AGG - chr2_1:16743976-16743995 None:intergenic 45.0%
GCAACACTTGACTGAAGAGT+TGG - chr2_1:16743979-16743998 None:intergenic 45.0%
GACTGTGGAAATGGAAGATG+GGG - chr2_1:16744044-16744063 None:intergenic 45.0%
GTAATCCTCACCTCACAAGC+TGG + chr2_1:16740625-16740644 Msa0198140:intron 50.0%
CAAAACCAGCTTGTGAGGTG+AGG - chr2_1:16740633-16740652 None:intergenic 50.0%
TTAATCCAATCCCGCCCGAA+CGG - chr2_1:16740930-16740949 None:intergenic 50.0%
ATGGCTAGGACACCTCACAA+TGG + chr2_1:16741044-16741063 Msa0198140:CDS 50.0%
! GGAGTTATCAGCCTTGTAGC+TGG + chr2_1:16741336-16741355 Msa0198140:CDS 50.0%
AAATTCCACGTTCGCACTCC+AGG - chr2_1:16741387-16741406 None:intergenic 50.0%
GGGAATTATCGTGGCTTCAG+TGG + chr2_1:16741759-16741778 Msa0198140:CDS 50.0%
AGGTTCTTGGCAAATGGACC+GGG + chr2_1:16741843-16741862 Msa0198140:CDS 50.0%
ATCTGTTCAGCCTCATACGG+TGG + chr2_1:16741910-16741929 Msa0198140:CDS 50.0%
GAAGCTGTTACCACCGTATG+AGG - chr2_1:16741923-16741942 None:intergenic 50.0%
GTGGTAACAGCTTCGGTTGA+GGG + chr2_1:16741929-16741948 Msa0198140:CDS 50.0%
TGGTAACAGCTTCGGTTGAG+GGG + chr2_1:16741930-16741949 Msa0198140:CDS 50.0%
GCGATATTCTCCATCGTGTG+AGG + chr2_1:16742217-16742236 Msa0198140:CDS 50.0%
ATTCTCCATCGTGTGAGGGA+TGG + chr2_1:16742222-16742241 Msa0198140:CDS 50.0%
TTCTCCATCGTGTGAGGGAT+GGG + chr2_1:16742223-16742242 Msa0198140:CDS 50.0%
TCGGGAATCAGATCCTCCAT+TGG + chr2_1:16742389-16742408 Msa0198140:CDS 50.0%
CATCTACGACTGCAGAGAGT+GGG - chr2_1:16742581-16742600 None:intergenic 50.0%
ACATCTACGACTGCAGAGAG+TGG - chr2_1:16742582-16742601 None:intergenic 50.0%
CTCTCTGCAGTCGTAGATGT+AGG + chr2_1:16742582-16742601 Msa0198140:intron 50.0%
CTTGTAGTCTGCATGGTTGC+AGG + chr2_1:16742947-16742966 Msa0198140:CDS 50.0%
GCAGGTGTAGTTATCTTCGG+TGG + chr2_1:16742965-16742984 Msa0198140:CDS 50.0%
TGGCCTAGAGCCATACTGTA+TGG - chr2_1:16743134-16743153 None:intergenic 50.0%
!! GGCTCTAGGCCAGACTTTAA+AGG + chr2_1:16743142-16743161 Msa0198140:CDS 50.0%
ATGGAGAGGATTGTTGGCCG+TGG - chr2_1:16740398-16740417 None:intergenic 55.0%
!!! ATTTTGGGACTCCGTTCGGG+CGG + chr2_1:16740916-16740935 Msa0198140:CDS 55.0%
! TCATCGAGGTGCCTTCCTTG+TGG + chr2_1:16741570-16741589 Msa0198140:CDS 55.0%
GTGCCTTCCTTGTGGTACTG+TGG + chr2_1:16741578-16741597 Msa0198140:CDS 55.0%
GGTTCTTGGCAAATGGACCG+GGG + chr2_1:16741844-16741863 Msa0198140:CDS 55.0%
GTTCTTGGCAAATGGACCGG+GGG + chr2_1:16741845-16741864 Msa0198140:CDS 55.0%
TTCTTGGCAAATGGACCGGG+GGG + chr2_1:16741846-16741865 Msa0198140:CDS 55.0%
GGTGGTAACAGCTTCGGTTG+AGG + chr2_1:16741928-16741947 Msa0198140:CDS 55.0%
GTTTCCCATCCCTCACACGA+TGG - chr2_1:16742230-16742249 None:intergenic 55.0%
AGAATAGTGACCGACGACCG+TGG - chr2_1:16742685-16742704 None:intergenic 55.0%
!!! TTTTGGGACTCCGTTCGGGC+GGG + chr2_1:16740917-16740936 Msa0198140:CDS 60.0%
ATGTGGGTGACCTCGCTTCC+TGG + chr2_1:16741366-16741385 Msa0198140:CDS 60.0%
GCTTCGGTTGAGGGGCCATA+TGG + chr2_1:16741938-16741957 Msa0198140:CDS 60.0%
CGTTCGCACTCCAGGAAGCG+AGG - chr2_1:16741379-16741398 None:intergenic 65.0%
CGCTTCCTGGAGTGCGAACG+TGG + chr2_1:16741379-16741398 Msa0198140:CDS 65.0%
GGACTCCGTTCGGGCGGGAT+TGG + chr2_1:16740922-16740941 Msa0198140:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 16738829 16744593 16738829 ID=Msa0198140;Name=Msa0198140
chr2_1 mRNA 16738829 16744593 16738829 ID=Msa0198140-mRNA-1;Parent=Msa0198140;Name=Msa0198140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=227|1|1|1|1|1|9|513|740
chr2_1 exon 16738829 16739299 16738829 ID=Msa0198140-mRNA-1:exon:6917;Parent=Msa0198140-mRNA-1
chr2_1 exon 16739531 16739624 16739531 ID=Msa0198140-mRNA-1:exon:6918;Parent=Msa0198140-mRNA-1
chr2_1 exon 16739911 16740105 16739911 ID=Msa0198140-mRNA-1:exon:6919;Parent=Msa0198140-mRNA-1
chr2_1 exon 16740900 16741134 16740900 ID=Msa0198140-mRNA-1:exon:6920;Parent=Msa0198140-mRNA-1
chr2_1 exon 16741297 16741624 16741297 ID=Msa0198140-mRNA-1:exon:6921;Parent=Msa0198140-mRNA-1
chr2_1 exon 16741717 16741984 16741717 ID=Msa0198140-mRNA-1:exon:6922;Parent=Msa0198140-mRNA-1
chr2_1 exon 16742155 16742410 16742155 ID=Msa0198140-mRNA-1:exon:6923;Parent=Msa0198140-mRNA-1
chr2_1 exon 16742731 16743163 16742731 ID=Msa0198140-mRNA-1:exon:6924;Parent=Msa0198140-mRNA-1
chr2_1 exon 16743911 16744593 16743911 ID=Msa0198140-mRNA-1:exon:6925;Parent=Msa0198140-mRNA-1
chr2_1 five_prime_UTR 16738829 16739055 16738829 ID=Msa0198140-mRNA-1:five_prime_utr;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16739056 16739299 16739056 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16739531 16739624 16739531 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16739911 16740105 16739911 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16740900 16741134 16740900 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16741297 16741624 16741297 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16741717 16741984 16741717 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16742155 16742410 16742155 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16742731 16743163 16742731 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 CDS 16743911 16744080 16743911 ID=Msa0198140-mRNA-1:cds;Parent=Msa0198140-mRNA-1
chr2_1 three_prime_UTR 16744081 16744593 16744081 ID=Msa0198140-mRNA-1:three_prime_utr;Parent=Msa0198140-mRNA-1
Gene Sequence

>Msa0198140

ATGGAGAAAAATTCTGTTGATTATAGTCCTTTGCTTTCTAAGAAAGGTGATGAAACTGATGGTTATGTTAAAAAAAATTCACCTAATTTTGTTGTGTCAGCTACTAAATGGACTCTTAGGACTTTGATTTCCATAATCTTCATTATATGGGCTGCTTTCATTTTTCTGTTACCATCAGAATCTGTGCATGGATTGTTCACAAAATGGCTTAATTTCAGCAGTGGAACTTCCTTTGGAATCACAGGAAGCATTTTACTGATTCTCAGTGCTCCTGTTCTTGCAATTGCATTTCTTGCCATTGCATACCTAATTATTTCTGGGGAGGATCAGCTTCCTGAGAAGAAGACTTCCAAGTATCCAAGATTTCGCCTATGGACTTTTCCGATCCTTATCAATGGACCATTTGGGGTTGTTTCTGCAACAGAGCTCATTGGAATTGTCATTTTTTTGGCATATGTTATTTGGGCTTTCTATGCTTATACTATGCAGGCTCTTGCAGCTATGTCTTATCAGTTATCATTTAGAGCCAAGAGCTTGCACATGTTGGAAATTTTGGGACTCCGTTCGGGCGGGATTGGATTAATGTGCTTGGCGTTTTTATTTATACCGATTTCAAGGGGATCTGTTCTTCTCCGCTTCATAGATATCCCTTTCGAACATGCTGCAAAATATCATGTATGGCTAGGACACCTCACAATGGTGATTTTTACTCTCCATGGACTCTTCTATGTTATTGAGTGGCTAATGGAAGGTCACCTAATTCAAGAATTATTAGAATGGAAAGATATTGGTGTTGCCAATCTAGCAGGAGTTATCAGCCTTGTAGCTGGTTTGTTGATGTGGGTGACCTCGCTTCCTGGAGTGCGAACGTGGAATTTTGAGCTGTTTTTCTACACTCACCAATTATACATAATCTTTATTGTGTTCATGGCTTTGCATATTGGCGACTTTATTTTTGCTATGGCTGCTGGACCAATATTTCTTTTTATGCTTGATCGATTTCTGAGGTTCTGCCAATCAAGAAGGACAGTAAATGTAATCTCATCGAGGTGCCTTCCTTGTGGTACTGTGGAAATGGTTCTGTCAAAACCACAAAATTTGAGATACAATGCCCTAAGCTTCATTTTCCTTCAAGTTCGGGAATTATCGTGGCTTCAGTGGCATCCATTCAGTGTTTCTTCTAGCCCTTTAGATGGAAAAAATCACATTGCTGTTCTTATTAAGGTTCTTGGCAAATGGACCGGGGGGTTAAGAGAAAGAATCACTGAAGGTGATGCAACAGAAAATTTATCTGTTCAGCCTCATACGGTGGTAACAGCTTCGGTTGAGGGGCCATATGGACACGAAGTACCATATCACTTGATGTACGAAAACCTTATATTAGTGGCAGGTGGTATTGGACTTTCGCCTTTCCTTGCTATATTGAGCGATATTCTCCATCGTGTGAGGGATGGGAAACCTTGTCGACCAAGAAATATTTTAATTGTTTGGGCAGTGAAAAAGTCAAATGAGCTTCCACTTCTTTCGACCGTTGACATGGAAACAATCTGTCCACGCTTTTCTGATAAAGTAAATATCAATGTACATATCTTCGTCACTCGGGAATCAGATCCTCCATTGGAAGAGGGATATAATTACAAACCAATAAAATCACTCTGTCCCTTTCCTATGCCTAGTGATTATGGAATGTCTGGTTTGGTTGGTACAGGAAACAATTTCTGGTCTGGACTATATGTCATTTCATCTACCTTAGGCTTTGTGATCTTACTTGCTTTGTTGAATATTTACTATATAAATCCAGTTGGATTGGTTATATGGTGGTACAAAGGGCTACTACTTGTAGTCTGCATGGTTGCAGGTGTAGTTATCTTCGGTGGTATAGTGGTTGGATTTTGGCATATGTGGGAAAAGCAAAGTTCTCTAAAGGATAAGTCCAATAACATCAAGGTTGATAAAATTGAGCAAAATGGCTCTGTGGATCACAAGGATCTAAGTCAATACAATATTGCAAAGTTAACTACCATACAGTATGGCTCTAGGCCAGACTTTAAAGAGATTTTTGAATCAATGTCAGAGAAATGGGGCCATGTTGATGTTGGTATTCTAGTTTGTGGTCCTCCAACTCTTCAGTCAAGTGTTGCACAAGAAATCAGGTCACATAGTTTGACAAGACAACCTTATCACCCCATCTTCCATTTCCACAGTCATAGCTTTGATCTCTAG
Protein sequence

>Msa0198140

MEKNSVDYSPLLSKKGDETDGYVKKNSPNFVVSATKWTLRTLISIIFIIWAAFIFLLPSESVHGLFTKWLNFSSGTSFGITGSILLILSAPVLAIAFLAIAYLIISGEDQLPEKKTSKYPRFRLWTFPILINGPFGVVSATELIGIVIFLAYVIWAFYAYTMQALAAMSYQLSFRAKSLHMLEILGLRSGGIGLMCLAFLFIPISRGSVLLRFIDIPFEHAAKYHVWLGHLTMVIFTLHGLFYVIEWLMEGHLIQELLEWKDIGVANLAGVISLVAGLLMWVTSLPGVRTWNFELFFYTHQLYIIFIVFMALHIGDFIFAMAAGPIFLFMLDRFLRFCQSRRTVNVISSRCLPCGTVEMVLSKPQNLRYNALSFIFLQVRELSWLQWHPFSVSSSPLDGKNHIAVLIKVLGKWTGGLRERITEGDATENLSVQPHTVVTASVEGPYGHEVPYHLMYENLILVAGGIGLSPFLAILSDILHRVRDGKPCRPRNILIVWAVKKSNELPLLSTVDMETICPRFSDKVNINVHIFVTRESDPPLEEGYNYKPIKSLCPFPMPSDYGMSGLVGTGNNFWSGLYVISSTLGFVILLALLNIYYINPVGLVIWWYKGLLLVVCMVAGVVIFGGIVVGFWHMWEKQSSLKDKSNNIKVDKIEQNGSVDHKDLSQYNIAKLTTIQYGSRPDFKEIFESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTRQPYHPIFHFHSHSFDL*