AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0163540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163540 MtrunA17_Chr1g0178601 96.629 267 9 0 1 267 1 267 0.0 537
Msa0163540 MtrunA17_Chr1g0178591 84.586 266 41 0 1 266 1 266 1.49e-170 471
Msa0163540 MtrunA17_Chr1g0178541 84.672 137 21 0 130 266 44 180 7.94e-83 246
Msa0163540 MtrunA17_Chr4g0028741 39.852 271 150 7 2 265 6 270 1.96e-62 197
Msa0163540 MtrunA17_Chr1g0180371 41.810 232 126 3 35 263 48 273 2.96e-60 192
Msa0163540 MtrunA17_Chr1g0180331 35.741 263 159 4 9 266 19 276 7.98e-59 188
Msa0163540 MtrunA17_Chr7g0264911 43.721 215 110 4 55 264 2 210 4.75e-56 179
Msa0163540 MtrunA17_Chr7g0257091 38.433 268 145 5 10 267 8 265 5.45e-56 181
Msa0163540 MtrunA17_Chr4g0028711 38.136 236 140 2 27 262 37 266 1.59e-52 172
Msa0163540 MtrunA17_Chr4g0028721 35.556 225 139 2 17 241 1 219 2.31e-45 152
Msa0163540 MtrunA17_Chr1g0178561 88.889 63 7 0 67 129 1 63 5.90e-36 122
Msa0163540 MtrunA17_Chr4g0028731 36.000 150 95 1 17 166 1 149 2.01e-25 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163540 AT3G52720.3 42.593 270 151 2 1 267 1 269 1.65e-84 254
Msa0163540 AT3G52720.4 42.593 270 151 2 1 267 1 269 1.65e-84 254
Msa0163540 AT3G52720.1 42.593 270 151 2 1 267 1 269 1.65e-84 254
Msa0163540 AT3G52720.2 40.611 229 132 2 1 226 1 228 1.81e-64 201
Msa0163540 AT2G28210.1 38.806 268 149 6 5 263 10 271 1.01e-61 196
Msa0163540 AT1G08080.1 39.662 237 137 2 27 263 41 271 1.63e-60 193
Msa0163540 AT5G04180.1 39.300 257 141 7 9 258 5 253 5.60e-54 176
Msa0163540 AT4G20990.1 37.391 230 134 4 35 264 45 264 7.72e-54 175
Msa0163540 AT1G08065.1 35.849 265 156 4 7 263 10 268 1.83e-53 175
Msa0163540 AT4G21000.1 37.824 193 110 4 34 226 45 227 2.54e-42 145
Msa0163540 AT5G56330.1 32.377 244 116 5 24 263 136 334 7.59e-34 125
Msa0163540 AT5G56330.2 38.462 169 95 4 24 184 136 303 4.36e-30 115
Msa0163540 AT2G28210.2 39.850 133 71 4 5 128 10 142 3.34e-24 95.5

Find 95 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCAATATTATGGTTAATT+TGG 0.121058 1_4:-41789715 None:intergenic
TGTCTAAGGGTTTCAATTCT+TGG 0.170815 1_4:-41790180 None:intergenic
AAACGTGCCAAGGGCAATTT+TGG 0.183202 1_4:-41791803 None:intergenic
TATTGCAGCCCTCTACAATT+TGG 0.195816 1_4:+41791487 Msa0163540:CDS
GTGGGAGATATTAATATAAA+TGG 0.232737 1_4:+41790554 Msa0163540:CDS
AAGCCAAAGTTGCAATAAAA+AGG 0.281425 1_4:-41789872 None:intergenic
AGGATGGTAGTTTCTGTCTA+AGG 0.282486 1_4:-41790194 None:intergenic
ATTGAGAGTTCTCTATTCTA+AGG 0.294436 1_4:+41793449 Msa0163540:three_prime_UTR
GTCCAAATTAACCATAATAT+TGG 0.297124 1_4:+41789713 Msa0163540:five_prime_UTR
TTAACAAGTGTAGCATTTGT+AGG 0.319349 1_4:-41790214 None:intergenic
GGATGGTGGATGAATTTGTT+GGG 0.326789 1_4:-41789667 None:intergenic
CCCCACTTCTCAGGACCATT+TGG 0.327367 1_4:-41790073 None:intergenic
TTAACAACCAATTCAACATT+GGG 0.341353 1_4:+41790233 Msa0163540:CDS
ATGTAGAGGAAATAAATAAA+AGG 0.341861 1_4:+41791827 Msa0163540:CDS
TACATACCCCAATGTTGAAT+TGG 0.343928 1_4:-41790240 None:intergenic
CAACATATCTATAATATCTA+TGG 0.348697 1_4:-41791852 None:intergenic
TAGATAATAGTTATTCAAAA+TGG 0.352292 1_4:+41789827 Msa0163540:exon
GAATCCCATGTCTCTATTTG+TGG 0.358258 1_4:-41793310 None:intergenic
TGTGTTCTTCTCCAATATTA+TGG 0.361637 1_4:-41789724 None:intergenic
ATTCATTGAAACAACTTCAT+TGG 0.362363 1_4:+41790585 Msa0163540:CDS
TAATCATATCACTCAAATTA+TGG 0.363011 1_4:+41793538 Msa0163540:three_prime_UTR
ATTGCAGCCCTCTACAATTT+GGG 0.374926 1_4:+41791488 Msa0163540:CDS
CATGCAAAGAAGGTGTCATT+TGG 0.384098 1_4:+41791893 Msa0163540:CDS
TCGTTTGCAGCATGCTCAAA+TGG 0.388881 1_4:+41790109 Msa0163540:CDS
AACTCTACCTTGGAGATTAG+AGG 0.392300 1_4:-41791521 None:intergenic
GGCATGCTCCTGCAGAGCAC+CGG 0.395484 1_4:+41790606 Msa0163540:CDS
CCATGAGCCCGGTGCTCTGC+AGG 0.396230 1_4:-41790614 None:intergenic
CTCAGGGTTCCCCACTTCTC+AGG 0.400725 1_4:-41790082 None:intergenic
TTTGAGGATATGCTCAACTT+TGG 0.407354 1_4:-41789688 None:intergenic
TTTAGTTATATTGGACCAAA+TGG 0.408021 1_4:+41790058 Msa0163540:CDS
TGGATGGTGGATGAATTTGT+TGG 0.409350 1_4:-41789668 None:intergenic
GTAGGTTCGGACGCTCTCTA+AGG 0.409733 1_4:+41793187 Msa0163540:intron
CCTGCAGAGCACCGGGCTCA+TGG 0.434839 1_4:+41790614 Msa0163540:CDS
ATTGCCCACACGATTCTCAT+TGG 0.437600 1_4:-41791773 None:intergenic
ACCTTGGAGATTAGAGGATC+AGG 0.444518 1_4:-41791515 None:intergenic
GGTGTCATTTGGAACATCAT+TGG 0.445336 1_4:+41791904 Msa0163540:CDS
AGCATTTAACAGATTCTGTT+GGG 0.446039 1_4:-41789577 None:intergenic
GGATGGTAGTTTCTGTCTAA+GGG 0.452303 1_4:-41790193 None:intergenic
GTTAACAACCAATTCAACAT+TGG 0.453599 1_4:+41790232 Msa0163540:CDS
AAAACTTCTAAAGGCACCAT+TGG 0.455400 1_4:+41793217 Msa0163540:CDS
TATCTTCTGTGAGGTGAACT+AGG 0.462726 1_4:-41791448 None:intergenic
TTTATGATAAAACTAGGTAC+TGG 0.469055 1_4:+41793367 Msa0163540:three_prime_UTR
GCATGCTCCTGCAGAGCACC+GGG 0.482296 1_4:+41790607 Msa0163540:CDS
GAGCATTTAACAGATTCTGT+TGG 0.485233 1_4:-41789578 None:intergenic
CCTTGGCACGTTTGATGTAG+AGG 0.490692 1_4:+41791813 Msa0163540:CDS
CAAATGACACCTTCTTTGCA+TGG 0.493029 1_4:-41791892 None:intergenic
CATAGATATTATAGATATGT+TGG 0.494664 1_4:+41791853 Msa0163540:CDS
CGTTTGCAGCATGCTCAAAT+GGG 0.497742 1_4:+41790110 Msa0163540:CDS
ATGCTGCAAACGATGGACTC+AGG 0.504036 1_4:-41790099 None:intergenic
CGACCATTCAATGGCTGAAG+TGG 0.505749 1_4:-41793266 None:intergenic
GATTGAGAAGTAAATCTTCA+AGG 0.517075 1_4:-41789850 None:intergenic
TATTCTAAGGATGTTCTACT+AGG 0.517315 1_4:+41793462 Msa0163540:three_prime_UTR
GGAACAACTAAAACTTCTAA+AGG 0.517615 1_4:+41793208 Msa0163540:CDS
AAACTTCTAAAGGCACCATT+GGG 0.525824 1_4:+41793218 Msa0163540:CDS
TCATTCATTACAAGTTCCAC+TGG 0.530814 1_4:-41790145 None:intergenic
GATGGTGGATGAATTTGTTG+GGG 0.531971 1_4:-41789666 None:intergenic
AGGCCACTTCAGCCATTGAA+TGG 0.533333 1_4:+41793263 Msa0163540:CDS
ACTACCCCTCCATGCAAAGA+AGG 0.533789 1_4:+41791883 Msa0163540:CDS
CCTCTACATCAAACGTGCCA+AGG 0.536082 1_4:-41791813 None:intergenic
CAAGTGTAGCATTTGTAGGA+TGG 0.539412 1_4:-41790210 None:intergenic
AGGATATGCTCAACTTTGGA+TGG 0.539841 1_4:-41789684 None:intergenic
CTTACAAACGACCATGAGCC+CGG 0.541180 1_4:-41790625 None:intergenic
ACCAAATGGTCCTGAGAAGT+GGG 0.541655 1_4:+41790072 Msa0163540:CDS
GACCAAATGGTCCTGAGAAG+TGG 0.543240 1_4:+41790071 Msa0163540:CDS
AGAATCTGTTAAATGCTCCT+TGG 0.543467 1_4:+41789583 Msa0163540:five_prime_UTR
TGACACCTTCTTTGCATGGA+GGG 0.546979 1_4:-41791888 None:intergenic
ATAGGAAAAGTATGCTGCCA+AGG 0.556649 1_4:-41789600 None:intergenic
AAAGATGCCAAAATTGCCCT+TGG 0.561911 1_4:+41791796 Msa0163540:CDS
TTCCAAATACAGACATGAAG+CGG 0.562427 1_4:+41791418 Msa0163540:intron
TTTAGAGGGATACTAACATC+AGG 0.569976 1_4:-41793399 None:intergenic
TGCTGCAAACGATGGACTCA+GGG 0.573943 1_4:-41790098 None:intergenic
TTTGAGCATGCTGCAAACGA+TGG 0.579578 1_4:-41790106 None:intergenic
GACACCTTCTTTGCATGGAG+GGG 0.587126 1_4:-41791887 None:intergenic
TTGTAGAACATATATAGTGA+TGG 0.595013 1_4:-41789758 None:intergenic
CTCTACATCAAACGTGCCAA+GGG 0.596044 1_4:-41791812 None:intergenic
TAGAGTTTCAGCACAATGCA+AGG 0.597697 1_4:+41793243 Msa0163540:CDS
TCCTGATCCTCTAATCTCCA+AGG 0.601948 1_4:+41791514 Msa0163540:CDS
TGTTATTGTTATCTTCTGTG+AGG 0.604430 1_4:-41791457 None:intergenic
AACTACCACAAATAGAGACA+TGG 0.605284 1_4:+41793305 Msa0163540:exon
CATATATAGTGATGGTTGTG+TGG 0.611812 1_4:-41789750 None:intergenic
TGCTGAAACTCTACACCCAA+TGG 0.613860 1_4:-41793233 None:intergenic
CAGGATCACCCAAATTGTAG+AGG 0.616295 1_4:-41791496 None:intergenic
CATTTGGAACATCATTGGCA+AGG 0.625922 1_4:+41791909 Msa0163540:CDS
GGGGTTACTTACAAGATCAG+TGG 0.626201 1_4:-41789647 None:intergenic
AGGATCACCCAAATTGTAGA+GGG 0.637120 1_4:-41791495 None:intergenic
ACTACCACAAATAGAGACAT+GGG 0.637186 1_4:+41793306 Msa0163540:exon
TAACAACCAATTCAACATTG+GGG 0.644450 1_4:+41790234 Msa0163540:CDS
ATATGCTCAACTTTGGATGG+TGG 0.647963 1_4:-41789681 None:intergenic
ATGACACCTTCTTTGCATGG+AGG 0.651112 1_4:-41791889 None:intergenic
ATATATGTTCTACAAAGCTG+AGG 0.652452 1_4:+41789766 Msa0163540:five_prime_UTR
GCTAGCCAATGAGAATCGTG+TGG 0.657074 1_4:+41791768 Msa0163540:CDS
TGGGAAAGCACAAAGTCCAG+TGG 0.663928 1_4:+41790129 Msa0163540:CDS
CTAGCCAATGAGAATCGTGT+GGG 0.675900 1_4:+41791769 Msa0163540:CDS
CTTCTGTGAGGTGAACTAGG+TGG 0.676418 1_4:-41791445 None:intergenic
CCAAATGGTCCTGAGAAGTG+GGG 0.710021 1_4:+41790073 Msa0163540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATCTAATTTAATATATAT+TGG + chr1_4:41791284-41791303 Msa0163540:intron 10.0%
!! TAAATGTAGAATATATTATT+TGG + chr1_4:41791686-41791705 Msa0163540:intron 10.0%
!!! CCAATTTTTTTAAAAAAATT+CGG - chr1_4:41792250-41792269 None:intergenic 10.0%
!!! CCAATTTTTTAAAAATTTTT+CGG - chr1_4:41792381-41792400 None:intergenic 10.0%
!!! CAGAATTTTATTTTTTATTT+GGG + chr1_4:41792598-41792617 Msa0163540:intron 10.0%
!!! CCAATTTTTTAAAAAAATTT+CGG + chr1_4:41792752-41792771 Msa0163540:intron 10.0%
!!! CCAATTTTTTAAAAAAAATT+CGG + chr1_4:41792854-41792873 Msa0163540:intron 10.0%
!!! ATTTTATTATATATCATATG+AGG - chr1_4:41793598-41793617 None:intergenic 10.0%
!!! TAATAGTATACTATTTTTTT+TGG - chr1_4:41793641-41793660 None:intergenic 10.0%
!! TAGATAATAGTTATTCAAAA+TGG + chr1_4:41789827-41789846 Msa0163540:exon 15.0%
!! ATTTGAAAAGTAAAAATGAT+TGG - chr1_4:41790383-41790402 None:intergenic 15.0%
!!! AATTCTATAATGTTTTTTAG+TGG - chr1_4:41790726-41790745 None:intergenic 15.0%
!! AAAAATTTATAAGCATCATT+TGG - chr1_4:41790955-41790974 None:intergenic 15.0%
!! AGTTATATAAATAGTTTGAA+AGG - chr1_4:41791123-41791142 None:intergenic 15.0%
!! ATTTAATATATATTGGTACA+AGG + chr1_4:41791291-41791310 Msa0163540:intron 15.0%
!! TCAAATTTATAAAACCAATT+CGG - chr1_4:41791982-41792001 None:intergenic 15.0%
!!! CCGAATTTTTTTAAAAAAAT+TGG + chr1_4:41792247-41792266 Msa0163540:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG + chr1_4:41792279-41792298 Msa0163540:intron 15.0%
!!! CCGAAAAATTTTTAAAAAAT+TGG + chr1_4:41792378-41792397 Msa0163540:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG + chr1_4:41792279-41792298 Msa0163540:intron 15.0%
!! CCAAATAAAAAATAAAATTC+TGG - chr1_4:41792600-41792619 None:intergenic 15.0%
!!! CCAGAATTTTATTTTTTATT+TGG + chr1_4:41792597-41792616 Msa0163540:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG - chr1_4:41792279-41792298 None:intergenic 15.0%
!!! CCGAAATTTTTTTAAAAAAT+TGG - chr1_4:41792755-41792774 None:intergenic 15.0%
!! TAAAAATGAAAACAAAAATC+TGG - chr1_4:41792279-41792298 None:intergenic 15.0%
!!! CCGAATTTTTTTTAAAAAAT+TGG - chr1_4:41792857-41792876 None:intergenic 15.0%
!!! TTTGTATTAATTTTTGCTTT+TGG + chr1_4:41793136-41793155 Msa0163540:intron 15.0%
!! TAAAAACTACATTTAATTCA+TGG - chr1_4:41793341-41793360 None:intergenic 15.0%
!!! ACAAATTTTATGATAAAACT+AGG + chr1_4:41793361-41793380 Msa0163540:three_prime_UTR 15.0%
!!! ATACTTTTCCTATATAGAAA+AGG + chr1_4:41789610-41789629 Msa0163540:five_prime_UTR 20.0%
!!! AGTTTTTTTTATGCTAGATT+CGG + chr1_4:41790030-41790049 Msa0163540:intron 20.0%
!!! TCGGTTAATTTTAGTTATAT+TGG + chr1_4:41790049-41790068 Msa0163540:CDS 20.0%
!!! CTTAAAAAGTGTAAAAATTG+TGG + chr1_4:41790285-41790304 Msa0163540:intron 20.0%
!! AAACAAAGTACACAATTATA+AGG + chr1_4:41790454-41790473 Msa0163540:intron 20.0%
!!! AAAATATAGGTACATTTTGA+AGG + chr1_4:41790527-41790546 Msa0163540:intron 20.0%
!! TAATTCAACAGAATGTTTAA+AGG + chr1_4:41791061-41791080 Msa0163540:intron 20.0%
!! TTTATTCCTTTACAAAAATC+TGG - chr1_4:41791228-41791247 None:intergenic 20.0%
!!! GCTAAATAGATTTTTATTAG+AGG - chr1_4:41791355-41791374 None:intergenic 20.0%
!!! ACTAACATTGTAATTTGTAA+GGG - chr1_4:41791377-41791396 None:intergenic 20.0%
!!! AACTAACATTGTAATTTGTA+AGG - chr1_4:41791378-41791397 None:intergenic 20.0%
!! ATGTAGAGGAAATAAATAAA+AGG + chr1_4:41791827-41791846 Msa0163540:CDS 20.0%
!! CAACATATCTATAATATCTA+TGG - chr1_4:41791855-41791874 None:intergenic 20.0%
!! CATAGATATTATAGATATGT+TGG + chr1_4:41791853-41791872 Msa0163540:CDS 20.0%
!! TACTAAAGTGAATTAAATGT+AGG + chr1_4:41792005-41792024 Msa0163540:intron 20.0%
!!! AAAATTCTGGAAAAAAATTC+TGG + chr1_4:41792568-41792587 Msa0163540:intron 20.0%
!!! CCAGAATTTTTTTTAAATCT+GGG - chr1_4:41792626-41792645 None:intergenic 20.0%
!!! TCCAGAATTTTTTTTAAATC+TGG - chr1_4:41792627-41792646 None:intergenic 20.0%
!! AAATAAAATCTGGAAAATTC+TGG - chr1_4:41792785-41792804 None:intergenic 20.0%
!! CACAAATTACTTTACATTTA+AGG - chr1_4:41793099-41793118 None:intergenic 20.0%
!!! AATGTAAAGTAATTTGTGTT+TGG + chr1_4:41793101-41793120 Msa0163540:intron 20.0%
!!! CATTATTTTTTCAGTTTAGA+GGG - chr1_4:41793416-41793435 None:intergenic 20.0%
!!! ACATTATTTTTTCAGTTTAG+AGG - chr1_4:41793417-41793436 None:intergenic 20.0%
!! CTAAACTGAAAAAATAATGT+AGG + chr1_4:41793417-41793436 Msa0163540:three_prime_UTR 20.0%
!! AAAGAAAAAAAAAAACAGAG+TGG - chr1_4:41793512-41793531 None:intergenic 20.0%
!! TAATCATATCACTCAAATTA+TGG + chr1_4:41793538-41793557 Msa0163540:three_prime_UTR 20.0%
!! AACAAAAAAAATGTAGCATT+TGG + chr1_4:41793733-41793752 Msa0163540:three_prime_UTR 20.0%
! GTCCAAATTAACCATAATAT+TGG + chr1_4:41789713-41789732 Msa0163540:five_prime_UTR 25.0%
! CTCCAATATTATGGTTAATT+TGG - chr1_4:41789718-41789737 None:intergenic 25.0%
! TTGTAGAACATATATAGTGA+TGG - chr1_4:41789761-41789780 None:intergenic 25.0%
!! AATCCTTTTTATTGCAACTT+TGG + chr1_4:41789869-41789888 Msa0163540:CDS 25.0%
! TTTAGTTATATTGGACCAAA+TGG + chr1_4:41790058-41790077 Msa0163540:CDS 25.0%
! TTAACAACCAATTCAACATT+GGG + chr1_4:41790233-41790252 Msa0163540:CDS 25.0%
! AAGTACACAATTATAAGGTA+AGG + chr1_4:41790459-41790478 Msa0163540:intron 25.0%
!!! GGTTGAGTTTGTTAAAATAT+AGG + chr1_4:41790514-41790533 Msa0163540:intron 25.0%
! GTGGGAGATATTAATATAAA+TGG + chr1_4:41790554-41790573 Msa0163540:CDS 25.0%
! ATTCATTGAAACAACTTCAT+TGG + chr1_4:41790585-41790604 Msa0163540:CDS 25.0%
!! CTTGATTTTGTGAATGTATT+GGG - chr1_4:41790686-41790705 None:intergenic 25.0%
! CAATACATTCACAAAATCAA+GGG + chr1_4:41790685-41790704 Msa0163540:intron 25.0%
! ACTATAATTTAAGTCAGAGA+GGG - chr1_4:41790801-41790820 None:intergenic 25.0%
! AACTATAATTTAAGTCAGAG+AGG - chr1_4:41790802-41790821 None:intergenic 25.0%
!! TTAGTTCCAGATTTTTGTAA+AGG + chr1_4:41791219-41791238 Msa0163540:intron 25.0%
! TAGATGTAGAATATACGATA+TGG - chr1_4:41791271-41791290 None:intergenic 25.0%
! ATATATATTGGTACAAGGAA+TGG + chr1_4:41791296-41791315 Msa0163540:intron 25.0%
! TATATATTGGTACAAGGAAT+GGG + chr1_4:41791297-41791316 Msa0163540:intron 25.0%
! AACGTTCATATTTGATATCA+CGG + chr1_4:41791564-41791583 Msa0163540:intron 25.0%
! AAATAATAGAATTACACACG+TGG - chr1_4:41792912-41792931 None:intergenic 25.0%
! CCCAGATTTAAAAAAAATTC+TGG + chr1_4:41792623-41792642 Msa0163540:intron 25.0%
! AAATAATAGAATTACACACG+TGG + chr1_4:41792912-41792931 Msa0163540:intron 25.0%
! TTCTTACTTAATGATCATGT+AGG + chr1_4:41793169-41793188 Msa0163540:intron 25.0%
! TTTATGATAAAACTAGGTAC+TGG + chr1_4:41793367-41793386 Msa0163540:three_prime_UTR 25.0%
AGCATTTAACAGATTCTGTT+GGG - chr1_4:41789580-41789599 None:intergenic 30.0%
! AATGCTGTCCTTTTCTATAT+AGG - chr1_4:41789621-41789640 None:intergenic 30.0%
!! TGGTTAATTTGGACATTTTG+AGG - chr1_4:41789707-41789726 None:intergenic 30.0%
TGTGTTCTTCTCCAATATTA+TGG - chr1_4:41789727-41789746 None:intergenic 30.0%
ATATATGTTCTACAAAGCTG+AGG + chr1_4:41789766-41789785 Msa0163540:five_prime_UTR 30.0%
GATTGAGAAGTAAATCTTCA+AGG - chr1_4:41789853-41789872 None:intergenic 30.0%
AAGCCAAAGTTGCAATAAAA+AGG - chr1_4:41789875-41789894 None:intergenic 30.0%
TTAACAAGTGTAGCATTTGT+AGG - chr1_4:41790217-41790236 None:intergenic 30.0%
GTTAACAACCAATTCAACAT+TGG + chr1_4:41790232-41790251 Msa0163540:CDS 30.0%
TAACAACCAATTCAACATTG+GGG + chr1_4:41790234-41790253 Msa0163540:CDS 30.0%
GGTAGTATATAGTTATGATG+GGG - chr1_4:41790314-41790333 None:intergenic 30.0%
CGGTAGTATATAGTTATGAT+GGG - chr1_4:41790315-41790334 None:intergenic 30.0%
TCGGTAGTATATAGTTATGA+TGG - chr1_4:41790316-41790335 None:intergenic 30.0%
! ACATATTCGATTTGAAGTGT+CGG - chr1_4:41790335-41790354 None:intergenic 30.0%
TATTATTATTAGTCGTGCCT+AGG + chr1_4:41790403-41790422 Msa0163540:intron 30.0%
! ACTTTGTTTGTAACAGACAT+TGG - chr1_4:41790443-41790462 None:intergenic 30.0%
ATTATAAGGTAAGGTTGTTG+AGG + chr1_4:41790468-41790487 Msa0163540:intron 30.0%
AATTGTGATGTCAACTGATA+TGG + chr1_4:41790493-41790512 Msa0163540:intron 30.0%
!! GTACATTTTGAAGGTAAAGT+GGG + chr1_4:41790536-41790555 Msa0163540:CDS 30.0%
! CCTTGATTTTGTGAATGTAT+TGG - chr1_4:41790687-41790706 None:intergenic 30.0%
CCAATACATTCACAAAATCA+AGG + chr1_4:41790684-41790703 Msa0163540:intron 30.0%
TGAGTTTCACAATAATGAAC+AGG - chr1_4:41790855-41790874 None:intergenic 30.0%
CAACAGAATGTTTAAAGGAT+AGG + chr1_4:41791066-41791085 Msa0163540:intron 30.0%
CTAGAATAAATCAGAATGCA+TGG - chr1_4:41791326-41791345 None:intergenic 30.0%
TGTTATTGTTATCTTCTGTG+AGG - chr1_4:41791460-41791479 None:intergenic 30.0%
TGACTTAAATAACTCTACCT+TGG - chr1_4:41791534-41791553 None:intergenic 30.0%
GTATAGCTACTAATTACATG+TGG + chr1_4:41791712-41791731 Msa0163540:intron 30.0%
AGGTACTAAGTTTAATCAGT+TGG + chr1_4:41791929-41791948 Msa0163540:intron 30.0%
AGTTTAATCAGTTGGTTATG+CGG + chr1_4:41791937-41791956 Msa0163540:intron 30.0%
!! GAAATTGATTTTGACCGAAT+TGG + chr1_4:41791965-41791984 Msa0163540:intron 30.0%
ACTTAATGATCATGTAGGTT+CGG + chr1_4:41793174-41793193 Msa0163540:intron 30.0%
GGAACAACTAAAACTTCTAA+AGG + chr1_4:41793208-41793227 Msa0163540:CDS 30.0%
ATTGAGAGTTCTCTATTCTA+AGG + chr1_4:41793449-41793468 Msa0163540:three_prime_UTR 30.0%
! TATTCTAAGGATGTTCTACT+AGG + chr1_4:41793462-41793481 Msa0163540:three_prime_UTR 30.0%
GAGCATTTAACAGATTCTGT+TGG - chr1_4:41789581-41789600 None:intergenic 35.0%
AGAATCTGTTAAATGCTCCT+TGG + chr1_4:41789583-41789602 Msa0163540:five_prime_UTR 35.0%
TTTGAGGATATGCTCAACTT+TGG - chr1_4:41789691-41789710 None:intergenic 35.0%
CATATATAGTGATGGTTGTG+TGG - chr1_4:41789753-41789772 None:intergenic 35.0%
TCATTCATTACAAGTTCCAC+TGG - chr1_4:41790148-41790167 None:intergenic 35.0%
TGTCTAAGGGTTTCAATTCT+TGG - chr1_4:41790183-41790202 None:intergenic 35.0%
TACATACCCCAATGTTGAAT+TGG - chr1_4:41790243-41790262 None:intergenic 35.0%
!! GGTACATTTTGAAGGTAAAG+TGG + chr1_4:41790535-41790554 Msa0163540:intron 35.0%
AAGAAGAAGAAGAAGAGAGA+GGG - chr1_4:41790659-41790678 None:intergenic 35.0%
TACATTCACAAAATCAAGGG+CGG + chr1_4:41790688-41790707 Msa0163540:intron 35.0%
!!! TGTTTTTTAGTGGCCATAAG+AGG - chr1_4:41790716-41790735 None:intergenic 35.0%
CAGAATGTTTAAAGGATAGG+AGG + chr1_4:41791069-41791088 Msa0163540:intron 35.0%
!! AGCTTGATAATGACAACTTG+AGG + chr1_4:41791151-41791170 Msa0163540:intron 35.0%
TTCCAAATACAGACATGAAG+CGG + chr1_4:41791418-41791437 Msa0163540:intron 35.0%
ATTTACCACGAATCCAAACA+AGG + chr1_4:41791629-41791648 Msa0163540:intron 35.0%
TGAGTCATGTAATCCTTGTT+TGG - chr1_4:41791645-41791664 None:intergenic 35.0%
CAAGAGTCAAGACTATAAAG+TGG + chr1_4:41791663-41791682 Msa0163540:intron 35.0%
CACAATTGGCAAAATATAGG+GGG - chr1_4:41793057-41793076 None:intergenic 35.0%
GCACAATTGGCAAAATATAG+GGG - chr1_4:41793056-41793075 None:intergenic 35.0%
CGCACAATTGGCAAAATATA+GGG - chr1_4:41793055-41793074 None:intergenic 35.0%
TCGCACAATTGGCAAAATAT+AGG - chr1_4:41793054-41793073 None:intergenic 35.0%
! TTTTGCCAATTGTGCGATTT+TGG + chr1_4:41792053-41792072 Msa0163540:intron 35.0%
AATCGCTCGTTTCAAACTAT+GGG - chr1_4:41793023-41793042 None:intergenic 35.0%
AAATCGCTCGTTTCAAACTA+TGG - chr1_4:41793022-41793041 None:intergenic 35.0%
!! TAGTTTGAAACGAGCGATTT+TGG + chr1_4:41792082-41792101 Msa0163540:intron 35.0%
! TTTCCCCCTTTCTGATTTTA+TGG + chr1_4:41792115-41792134 Msa0163540:intron 35.0%
!! TAGTTTGAAACGAGCGATTT+TGG - chr1_4:41792082-41792101 None:intergenic 35.0%
AAATCGCTCGTTTCAAACTA+TGG + chr1_4:41793022-41793041 Msa0163540:intron 35.0%
AATCGCTCGTTTCAAACTAT+GGG + chr1_4:41793023-41793042 Msa0163540:intron 35.0%
! TTTTGCCAATTGTGCGATTT+TGG - chr1_4:41792053-41792072 None:intergenic 35.0%
TCGCACAATTGGCAAAATAT+AGG + chr1_4:41793054-41793073 Msa0163540:intron 35.0%
CGCACAATTGGCAAAATATA+GGG + chr1_4:41793055-41793074 Msa0163540:intron 35.0%
GCACAATTGGCAAAATATAG+GGG + chr1_4:41793056-41793075 Msa0163540:intron 35.0%
CACAATTGGCAAAATATAGG+GGG + chr1_4:41793057-41793076 Msa0163540:intron 35.0%
!! AAAACTTCTAAAGGCACCAT+TGG + chr1_4:41793217-41793236 Msa0163540:CDS 35.0%
!! AAACTTCTAAAGGCACCATT+GGG + chr1_4:41793218-41793237 Msa0163540:CDS 35.0%
! TCAATTTTGCGACCATTCAA+TGG - chr1_4:41793278-41793297 None:intergenic 35.0%
AACTACCACAAATAGAGACA+TGG + chr1_4:41793305-41793324 Msa0163540:exon 35.0%
ACTACCACAAATAGAGACAT+GGG + chr1_4:41793306-41793325 Msa0163540:exon 35.0%
TTTAGAGGGATACTAACATC+AGG - chr1_4:41793402-41793421 None:intergenic 35.0%
! TTCTACTAGGACACTTTTCT+AGG + chr1_4:41793475-41793494 Msa0163540:three_prime_UTR 35.0%
!!! AGGACACTTTTCTAGGATTT+TGG + chr1_4:41793482-41793501 Msa0163540:three_prime_UTR 35.0%
! ATAGGAAAAGTATGCTGCCA+AGG - chr1_4:41789603-41789622 None:intergenic 40.0%
!! GATGGTGGATGAATTTGTTG+GGG - chr1_4:41789669-41789688 None:intergenic 40.0%
!! GGATGGTGGATGAATTTGTT+GGG - chr1_4:41789670-41789689 None:intergenic 40.0%
!! TGGATGGTGGATGAATTTGT+TGG - chr1_4:41789671-41789690 None:intergenic 40.0%
ATATGCTCAACTTTGGATGG+TGG - chr1_4:41789684-41789703 None:intergenic 40.0%
AGGATATGCTCAACTTTGGA+TGG - chr1_4:41789687-41789706 None:intergenic 40.0%
GGATGGTAGTTTCTGTCTAA+GGG - chr1_4:41790196-41790215 None:intergenic 40.0%
AGGATGGTAGTTTCTGTCTA+AGG - chr1_4:41790197-41790216 None:intergenic 40.0%
CAAGTGTAGCATTTGTAGGA+TGG - chr1_4:41790213-41790232 None:intergenic 40.0%
TATTAGTCGTGCCTAGGTAT+CGG + chr1_4:41790409-41790428 Msa0163540:intron 40.0%
AGAAGAAGAGAGAGGGAAAA+GGG - chr1_4:41790652-41790671 None:intergenic 40.0%
AAGAAGAAGAGAGAGGGAAA+AGG - chr1_4:41790653-41790672 None:intergenic 40.0%
GAAGAAGAAGAAGAAGAGAG+AGG - chr1_4:41790660-41790679 None:intergenic 40.0%
TATCTTCTGTGAGGTGAACT+AGG - chr1_4:41791451-41791470 None:intergenic 40.0%
TATTGCAGCCCTCTACAATT+TGG + chr1_4:41791487-41791506 Msa0163540:CDS 40.0%
ATTGCAGCCCTCTACAATTT+GGG + chr1_4:41791488-41791507 Msa0163540:CDS 40.0%
AGGATCACCCAAATTGTAGA+GGG - chr1_4:41791498-41791517 None:intergenic 40.0%
AACTCTACCTTGGAGATTAG+AGG - chr1_4:41791524-41791543 None:intergenic 40.0%
CGGTAAATTTGTCGAAGTCA+TGG + chr1_4:41791584-41791603 Msa0163540:intron 40.0%
! GTAATCCTTGTTTGGATTCG+TGG - chr1_4:41791637-41791656 None:intergenic 40.0%
AAAGATGCCAAAATTGCCCT+TGG + chr1_4:41791796-41791815 Msa0163540:CDS 40.0%
CAAATGACACCTTCTTTGCA+TGG - chr1_4:41791895-41791914 None:intergenic 40.0%
!! CATGCAAAGAAGGTGTCATT+TGG + chr1_4:41791893-41791912 Msa0163540:CDS 40.0%
!! GGTGTCATTTGGAACATCAT+TGG + chr1_4:41791904-41791923 Msa0163540:CDS 40.0%
! CATTTGGAACATCATTGGCA+AGG + chr1_4:41791909-41791928 Msa0163540:CDS 40.0%
ATCGCTCGTTTCAAACTATG+GGG - chr1_4:41793024-41793043 None:intergenic 40.0%
TCAGAAAGGGGGAAAACTAT+GGG - chr1_4:41792994-41793013 None:intergenic 40.0%
ATCAGAAAGGGGGAAAACTA+TGG - chr1_4:41792111-41792130 None:intergenic 40.0%
GGACCATAAAATCAGAAAGG+GGG - chr1_4:41792121-41792140 None:intergenic 40.0%
GGGACCATAAAATCAGAAAG+GGG - chr1_4:41792122-41792141 None:intergenic 40.0%
GGGGACCATAAAATCAGAAA+GGG - chr1_4:41792123-41792142 None:intergenic 40.0%
TGGGGACCATAAAATCAGAA+AGG - chr1_4:41792124-41792143 None:intergenic 40.0%
TTTATGGTCCCCATGACATT+TGG + chr1_4:41792131-41792150 Msa0163540:intron 40.0%
ACATCAGCACCAAATGTCAT+GGG - chr1_4:41792961-41792980 None:intergenic 40.0%
ACATCAGCACCAAATGTCAT+GGG + chr1_4:41792961-41792980 Msa0163540:intron 40.0%
TTTATGGTCCCCATGACATT+TGG - chr1_4:41792131-41792150 None:intergenic 40.0%
TTTCCCCCTTTCTGACTTTA+TGG - chr1_4:41792989-41793008 None:intergenic 40.0%
TCAGAAAGGGGGAAAACTAT+GGG + chr1_4:41792994-41793013 Msa0163540:intron 40.0%
ATCGCTCGTTTCAAACTATG+GGG + chr1_4:41793024-41793043 Msa0163540:intron 40.0%
TAGAGTTTCAGCACAATGCA+AGG + chr1_4:41793243-41793262 Msa0163540:CDS 40.0%
GAATCCCATGTCTCTATTTG+TGG - chr1_4:41793313-41793332 None:intergenic 40.0%
GGGGTTACTTACAAGATCAG+TGG - chr1_4:41789650-41789669 None:intergenic 45.0%
ACCAAATGGTCCTGAGAAGT+GGG + chr1_4:41790072-41790091 Msa0163540:CDS 45.0%
TTTGAGCATGCTGCAAACGA+TGG - chr1_4:41790109-41790128 None:intergenic 45.0%
TCGTTTGCAGCATGCTCAAA+TGG + chr1_4:41790109-41790128 Msa0163540:CDS 45.0%
CGTTTGCAGCATGCTCAAAT+GGG + chr1_4:41790110-41790129 Msa0163540:CDS 45.0%
AGAGAGGGTTTCATCGATGT+TGG - chr1_4:41790786-41790805 None:intergenic 45.0%
CTCCGCTTCATGTCTGTATT+TGG - chr1_4:41791423-41791442 None:intergenic 45.0%
CAGGATCACCCAAATTGTAG+AGG - chr1_4:41791499-41791518 None:intergenic 45.0%
TCCTGATCCTCTAATCTCCA+AGG + chr1_4:41791514-41791533 Msa0163540:CDS 45.0%
ACCTTGGAGATTAGAGGATC+AGG - chr1_4:41791518-41791537 None:intergenic 45.0%
CTAGCCAATGAGAATCGTGT+GGG + chr1_4:41791769-41791788 Msa0163540:CDS 45.0%
ATTGCCCACACGATTCTCAT+TGG - chr1_4:41791776-41791795 None:intergenic 45.0%
! AAACGTGCCAAGGGCAATTT+TGG - chr1_4:41791806-41791825 None:intergenic 45.0%
CTCTACATCAAACGTGCCAA+GGG - chr1_4:41791815-41791834 None:intergenic 45.0%
TGACACCTTCTTTGCATGGA+GGG - chr1_4:41791891-41791910 None:intergenic 45.0%
ATGACACCTTCTTTGCATGG+AGG - chr1_4:41791892-41791911 None:intergenic 45.0%
CAGAAAGGGGGAAAACTATG+GGG - chr1_4:41792995-41793014 None:intergenic 45.0%
CATCAGCACCAAATGTCATG+GGG - chr1_4:41792962-41792981 None:intergenic 45.0%
CACATCAGCACCAAATGTCA+TGG - chr1_4:41792960-41792979 None:intergenic 45.0%
CACATCAGCACCAAATGTCA+TGG + chr1_4:41792960-41792979 Msa0163540:intron 45.0%
CATCAGCACCAAATGTCATG+GGG + chr1_4:41792962-41792981 Msa0163540:intron 45.0%
TGGGGACCATAAAGTCAGAA+AGG + chr1_4:41792980-41792999 Msa0163540:intron 45.0%
GGGGACCATAAAGTCAGAAA+GGG + chr1_4:41792981-41793000 Msa0163540:intron 45.0%
GGGACCATAAAGTCAGAAAG+GGG + chr1_4:41792982-41793001 Msa0163540:intron 45.0%
GGACCATAAAGTCAGAAAGG+GGG + chr1_4:41792983-41793002 Msa0163540:intron 45.0%
GTCAGAAAGGGGGAAAACTA+TGG + chr1_4:41792993-41793012 Msa0163540:intron 45.0%
CAGAAAGGGGGAAAACTATG+GGG + chr1_4:41792995-41793014 Msa0163540:intron 45.0%
TGCTGAAACTCTACACCCAA+TGG - chr1_4:41793236-41793255 None:intergenic 45.0%
!!! AATTTTTAAAAAAAAAGATA+TGG + chr1_4:41791038-41791057 Msa0163540:intron 5.0%
!!! TAATTTTTTAAAAAAAATTC+TGG + chr1_4:41792348-41792367 Msa0163540:intron 5.0%
!! TAAAAATAAAAAATAAAATC+TGG + chr1_4:41792309-41792328 Msa0163540:intron 5.0%
!!! ATTTTTTTTTAAAAAAATTC+TGG + chr1_4:41792481-41792500 Msa0163540:intron 5.0%
!!! AAAATAATATTTTTAAATCT+GGG - chr1_4:41792509-41792528 None:intergenic 5.0%
!!! AAAAATAATATTTTTAAATC+TGG - chr1_4:41792510-41792529 None:intergenic 5.0%
!!! ATATTATTTTTTAAAAATTC+TGG + chr1_4:41792519-41792538 Msa0163540:intron 5.0%
!! AAAATAAAAAAATAAAATTC+TGG + chr1_4:41792555-41792574 Msa0163540:intron 5.0%
!!! TTTTTTTTAAAAAAAATTCA+GGG - chr1_4:41792651-41792670 None:intergenic 5.0%
!!! ATTTTTTTTAAAAAAAATTC+AGG - chr1_4:41792652-41792671 None:intergenic 5.0%
!! TAAAAATAAAAAATAAAATC+TGG - chr1_4:41792309-41792328 None:intergenic 5.0%
!! TAAAAATAAAAAATAAAATC+TGG - chr1_4:41792309-41792328 None:intergenic 5.0%
GACCAAATGGTCCTGAGAAG+TGG + chr1_4:41790071-41790090 Msa0163540:CDS 50.0%
CCAAATGGTCCTGAGAAGTG+GGG + chr1_4:41790073-41790092 Msa0163540:CDS 50.0%
! TGCTGCAAACGATGGACTCA+GGG - chr1_4:41790101-41790120 None:intergenic 50.0%
! ATGCTGCAAACGATGGACTC+AGG - chr1_4:41790102-41790121 None:intergenic 50.0%
! TGGGAAAGCACAAAGTCCAG+TGG + chr1_4:41790129-41790148 Msa0163540:CDS 50.0%
CTTACAAACGACCATGAGCC+CGG - chr1_4:41790628-41790647 None:intergenic 50.0%
CTTCTGTGAGGTGAACTAGG+TGG - chr1_4:41791448-41791467 None:intergenic 50.0%
GCTAGCCAATGAGAATCGTG+TGG + chr1_4:41791768-41791787 Msa0163540:CDS 50.0%
CCTCTACATCAAACGTGCCA+AGG - chr1_4:41791816-41791835 None:intergenic 50.0%
CCTTGGCACGTTTGATGTAG+AGG + chr1_4:41791813-41791832 Msa0163540:CDS 50.0%
ACTACCCCTCCATGCAAAGA+AGG + chr1_4:41791883-41791902 Msa0163540:CDS 50.0%
GACACCTTCTTTGCATGGAG+GGG - chr1_4:41791890-41791909 None:intergenic 50.0%
GGGGACCAAAATCGCACAAT+TGG - chr1_4:41793043-41793062 None:intergenic 50.0%
GGGGACCAAAATCGCACAAT+TGG + chr1_4:41793043-41793062 Msa0163540:intron 50.0%
AGGCCACTTCAGCCATTGAA+TGG + chr1_4:41793263-41793282 Msa0163540:CDS 50.0%
CGACCATTCAATGGCTGAAG+TGG - chr1_4:41793269-41793288 None:intergenic 50.0%
CCCCACTTCTCAGGACCATT+TGG - chr1_4:41790076-41790095 None:intergenic 55.0%
!! TCGTGCCTAGGTATCGGTGT+TGG + chr1_4:41790415-41790434 Msa0163540:intron 55.0%
!! CGTGCCTAGGTATCGGTGTT+GGG + chr1_4:41790416-41790435 Msa0163540:intron 55.0%
TGGACCCAACACCGATACCT+AGG - chr1_4:41790423-41790442 None:intergenic 55.0%
ATCAAGGGCGGTGCCTCTTA+TGG + chr1_4:41790700-41790719 Msa0163540:intron 55.0%
GTAGGTTCGGACGCTCTCTA+AGG + chr1_4:41793187-41793206 Msa0163540:intron 55.0%
CTCAGGGTTCCCCACTTCTC+AGG - chr1_4:41790085-41790104 None:intergenic 60.0%
GGCATGCTCCTGCAGAGCAC+CGG + chr1_4:41790606-41790625 Msa0163540:CDS 65.0%
! GCATGCTCCTGCAGAGCACC+GGG + chr1_4:41790607-41790626 Msa0163540:CDS 65.0%
CCATGAGCCCGGTGCTCTGC+AGG - chr1_4:41790617-41790636 None:intergenic 70.0%
!! CCTGCAGAGCACCGGGCTCA+TGG + chr1_4:41790614-41790633 Msa0163540:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 41789575 41793756 41789575 ID=Msa0163540;Name=Msa0163540
chr1_4 mRNA 41789575 41793756 41789575 ID=Msa0163540-mRNA-1;Parent=Msa0163540;Name=Msa0163540-mRNA-1;_AED=0.08;_eAED=0.08;_QI=271|1|1|1|1|1|6|437|267
chr1_4 exon 41789575 41789915 41789575 ID=Msa0163540-mRNA-1:exon:12079;Parent=Msa0163540-mRNA-1
chr1_4 exon 41790047 41790255 41790047 ID=Msa0163540-mRNA-1:exon:12080;Parent=Msa0163540-mRNA-1
chr1_4 exon 41790536 41790642 41790536 ID=Msa0163540-mRNA-1:exon:12081;Parent=Msa0163540-mRNA-1
chr1_4 exon 41791430 41791535 41791430 ID=Msa0163540-mRNA-1:exon:12082;Parent=Msa0163540-mRNA-1
chr1_4 exon 41791748 41791930 41791748 ID=Msa0163540-mRNA-1:exon:12083;Parent=Msa0163540-mRNA-1
chr1_4 exon 41793191 41793756 41793191 ID=Msa0163540-mRNA-1:exon:12084;Parent=Msa0163540-mRNA-1
chr1_4 five_prime_UTR 41789575 41789845 41789575 ID=Msa0163540-mRNA-1:five_prime_utr;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41789846 41789915 41789846 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41790047 41790255 41790047 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41790536 41790642 41790536 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41791430 41791535 41791430 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41791748 41791930 41791748 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 CDS 41793191 41793319 41793191 ID=Msa0163540-mRNA-1:cds;Parent=Msa0163540-mRNA-1
chr1_4 three_prime_UTR 41793320 41793756 41793320 ID=Msa0163540-mRNA-1:three_prime_utr;Parent=Msa0163540-mRNA-1
Gene Sequence

>Msa0163540

ATGGCCTTGAAGATTTACTTCTCAATCCTTTTTATTGCAACTTTGGCTTTATGCACTTCAGCAAATTATAATTCGGTTAATTTTAGTTATATTGGACCAAATGGTCCTGAGAAGTGGGGAACCCTGAGTCCATCGTTTGCAGCATGCTCAAATGGGAAAGCACAAAGTCCAGTGGAACTTGTAATGAATGATATTGTCATGAACCAAGAATTGAAACCCTTAGACAGAAACTACCATCCTACAAATGCTACACTTGTTAACAACCAATTCAACATTGGGGTACATTTTGAAGGTAAAGTGGGAGATATTAATATAAATGGAATGAATTATTCATTGAAACAACTTCATTGGCATGCTCCTGCAGAGCACCGGGCTCATGGTCGTTTACATGAAGCGGAGCTCCACCTAGTTCACCTCACAGAAGATAACAATAACATAGCAGTTATTGCAGCCCTCTACAATTTGGGTGATCCTGATCCTCTAATCTCCAAGATTGAAGACAAGTTCTATGAGCTAGCCAATGAGAATCGTGTGGGCAATAAAGATGCCAAAATTGCCCTTGGCACGTTTGATGTAGAGGAAATAAATAAAAGGATCCATAGATATTATAGATATGTTGGCTCTCTCACTACCCCTCCATGCAAAGAAGGTGTCATTTGGAACATCATTGGCAAGGTTCGGACGCTCTCTAAGGAACAACTAAAACTTCTAAAGGCACCATTGGGTGTAGAGTTTCAGCACAATGCAAGGCCACTTCAGCCATTGAATGGTCGCAAAATTGAGATGTACAACTACCACAAATAG

Protein sequence

>Msa0163540

MALKIYFSILFIATLALCTSANYNSVNFSYIGPNGPEKWGTLSPSFAACSNGKAQSPVELVMNDIVMNQELKPLDRNYHPTNATLVNNQFNIGVHFEGKVGDININGMNYSLKQLHWHAPAEHRAHGRLHEAELHLVHLTEDNNNIAVIAALYNLGDPDPLISKIEDKFYELANENRVGNKDAKIALGTFDVEEINKRIHRYYRYVGSLTTPPCKEGVIWNIIGKVRTLSKEQLKLLKAPLGVEFQHNARPLQPLNGRKIEMYNYHK*