AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0198220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198220 MtrunA17_Chr2g0291481 94.459 740 16 1 1 715 1 740 0.0 1410
Msa0198220 MtrunA17_Chr1g0202741 31.453 709 437 14 39 714 9 701 1.59e-103 332
Msa0198220 MtrunA17_Chr1g0202731 30.986 710 439 16 39 714 14 706 2.52e-100 323
Msa0198220 MtrunA17_Chr8g0348521 32.227 723 410 20 39 713 9 699 4.00e-97 315
Msa0198220 MtrunA17_Chr8g0348531 33.235 677 397 17 73 713 57 714 1.60e-96 313
Msa0198220 MtrunA17_Chr4g0058571 29.730 629 389 12 128 715 114 730 2.85e-77 263
Msa0198220 MtrunA17_Chr8g0349071 36.129 310 165 6 257 543 1 300 1.03e-48 173
Msa0198220 MtrunA17_Chr4g0061441 25.191 262 153 7 289 508 475 735 2.16e-18 90.1
Msa0198220 MtrunA17_Chr7g0272591 24.771 218 112 5 293 461 524 738 1.13e-15 81.3
Msa0198220 MtrunA17_Chr1g0192121 23.967 242 131 5 293 484 511 749 1.69e-15 80.9
Msa0198220 MtrunA17_Chr2g0301511 26.818 220 111 6 286 458 541 757 2.61e-15 80.1
Msa0198220 MtrunA17_Chr8g0387591 25.346 217 115 5 286 457 552 766 3.97e-15 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198220 AT5G49740.1 56.885 719 268 6 36 715 32 747 0.0 836
Msa0198220 AT5G49730.1 56.328 719 270 7 36 715 25 738 0.0 829
Msa0198220 AT5G49740.3 55.522 670 256 6 36 666 32 698 0.0 751
Msa0198220 AT5G49740.2 59.100 511 178 3 36 515 32 542 0.0 620
Msa0198220 AT5G49730.2 58.513 511 179 4 36 515 25 533 0.0 616
Msa0198220 AT1G01580.1 32.948 692 401 17 67 714 52 724 1.55e-108 346
Msa0198220 AT1G01580.2 32.948 692 401 17 67 714 130 802 1.31e-107 346
Msa0198220 AT1G01590.1 32.599 681 398 16 48 690 28 685 3.70e-105 337
Msa0198220 AT5G23980.1 31.102 717 427 16 39 714 8 698 5.01e-104 333
Msa0198220 AT5G23990.2 31.564 716 425 17 39 714 8 698 1.00e-103 333
Msa0198220 AT1G23020.7 31.446 671 405 17 48 690 28 671 2.47e-95 310
Msa0198220 AT1G23020.4 31.454 674 404 18 48 690 28 674 2.58e-94 308
Msa0198220 AT1G23020.3 31.454 674 404 18 48 690 28 674 2.58e-94 308
Msa0198220 AT1G23020.1 31.454 674 404 18 48 690 51 697 3.84e-94 308
Msa0198220 AT1G23020.5 31.454 674 404 18 48 690 51 697 3.84e-94 308
Msa0198220 AT1G23020.6 31.259 675 405 18 48 690 28 675 1.53e-93 305
Msa0198220 AT1G23020.2 31.259 675 405 18 48 690 51 698 1.80e-93 306
Msa0198220 AT5G23990.3 33.333 576 331 13 170 714 13 566 7.50e-93 300
Msa0198220 AT5G23990.1 33.275 568 334 12 178 714 103 656 3.87e-91 298
Msa0198220 AT5G50160.1 29.630 702 412 16 76 715 47 728 2.00e-78 266
Msa0198220 AT5G50160.2 31.139 562 318 12 210 715 1 549 2.13e-69 237
Msa0198220 AT1G19230.1 27.679 224 111 6 286 461 536 756 1.69e-19 94.0
Msa0198220 AT1G19230.2 27.679 224 111 6 286 461 562 782 2.05e-19 94.0
Msa0198220 AT4G25090.2 25.436 287 147 10 284 508 461 742 1.45e-16 84.7
Msa0198220 AT4G25090.1 26.941 219 113 6 284 458 473 688 1.58e-16 84.3
Msa0198220 AT5G07390.2 27.111 225 113 8 284 458 479 702 5.56e-16 82.8
Msa0198220 AT5G07390.1 27.111 225 113 8 284 458 511 734 6.90e-16 82.4
Msa0198220 AT1G64060.1 26.389 216 114 5 286 457 558 772 1.16e-15 81.6
Msa0198220 AT5G47910.1 27.273 220 114 6 293 468 554 771 2.08e-15 80.9
Msa0198220 AT1G09090.2 24.545 220 114 6 289 459 473 689 3.96e-15 80.1
Msa0198220 AT5G51060.1 23.242 327 165 12 265 508 487 810 1.88e-14 77.8

Find 195 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCACATGTTGGAAATTT+TGG 0.012603 2_1:-16819908 Msa0198220:CDS
CTCTAGCTTCATTTCTTTAA+TGG 0.116575 2_1:-16816734 Msa0198220:exon
AATAATATGTGCTTATAATT+TGG 0.131596 2_1:+16816369 None:intergenic
TTTATCAACCTTGATGTTAT+TGG 0.134284 2_1:+16817765 None:intergenic
TCACATTGCTGTTCTTATTA+AGG 0.174893 2_1:-16818985 Msa0198220:intron
TTTCCATAATCTTCATTATA+TGG 0.178699 2_1:-16821625 Msa0198220:CDS
TTTCCTATGCCTAGTGATTA+TGG 0.198831 2_1:-16818036 Msa0198220:CDS
GAAGACTCACTTCTTGAATT+AGG 0.211364 2_1:+16819686 None:intergenic
CATAATCTTTATTGTGTTCA+TGG 0.219086 2_1:-16819371 Msa0198220:CDS
ATTGCATACCTAATTATTTC+TGG 0.228186 2_1:-16821224 Msa0198220:CDS
ATCCAGTTGGATTGGTTATA+TGG 0.235123 2_1:-16817903 Msa0198220:CDS
CAAACAATTAAAATATTTCT+TGG 0.237519 2_1:+16818551 None:intergenic
TTGGTACAGGAAACAATTTC+TGG 0.238946 2_1:-16817999 Msa0198220:CDS
CAATAAAGATTATGTATAAT+TGG 0.241871 2_1:+16819380 None:intergenic
ATGTGGGTGACCTCGCTTCC+TGG 0.264483 2_1:-16819442 Msa0198220:CDS
TTGTTGTGTCAGCTACTAAA+TGG 0.270670 2_1:-16821664 Msa0198220:CDS
CAGTCCATTGTAAGATAAAA+AGG 0.273035 2_1:-16816543 Msa0198220:three_prime_UTR
GTAGCTGACACAACAAAATT+AGG 0.287451 2_1:+16821671 None:intergenic
AGCCCATATAATGAAGATTA+TGG 0.296364 2_1:+16821622 None:intergenic
GTGGTATAGTGGTTGGATTT+TGG 0.304110 2_1:-16817825 Msa0198220:CDS
TGAGTCATTTCTTGTAACTA+TGG 0.312971 2_1:-16821771 Msa0198220:exon
GGACTCCGTTCGGGCGGGAT+TGG 0.318769 2_1:-16819886 Msa0198220:CDS
TGGAACCCATGATAATATTA+AGG 0.319857 2_1:+16821886 None:intergenic
TTCAGCAGTGGAACTTCCTT+TGG 0.321244 2_1:-16821539 Msa0198220:CDS
GATCCTCCCCAGAAATAATT+AGG 0.323576 2_1:+16821216 None:intergenic
TGAATCAATGTCAGAGAAAT+GGG 0.324651 2_1:-16816891 Msa0198220:CDS
ATCCTTAAAAGGACTCTATA+AGG 0.325913 2_1:-16816513 Msa0198220:three_prime_UTR
ATCCTTATCAATGGACCATT+TGG 0.329104 2_1:-16820851 Msa0198220:CDS
TTGAATCAATGTCAGAGAAA+TGG 0.333723 2_1:-16816892 Msa0198220:CDS
TTCCATAATCTTCATTATAT+GGG 0.341924 2_1:-16821624 Msa0198220:CDS
GTTTCTTCTAGCCCTTTAGA+TGG 0.344014 2_1:-16819014 Msa0198220:CDS
GTTGATAAAATTGAGCAAAA+TGG 0.345926 2_1:-16817751 Msa0198220:CDS
AAACAAGTTTATAAGGGTTA+TGG 0.350301 2_1:+16816412 None:intergenic
CTTGTAGTCTGCATGGTTGC+AGG 0.353731 2_1:-16817862 Msa0198220:CDS
TCCTTATCAATGGACCATTT+GGG 0.354970 2_1:-16820850 Msa0198220:CDS
CATTTACTGTCCTTCTTGAT+TGG 0.357857 2_1:+16819266 None:intergenic
TGCATGGATTGTTCACAAAA+TGG 0.360348 2_1:-16821568 Msa0198220:CDS
TACCACCTGCCACTAATATA+AGG 0.362052 2_1:+16818645 None:intergenic
GGCTCTAGGCCAGACTTTAA+AGG 0.367135 2_1:-16817667 Msa0198220:intron
TTATTAGAATGGAAAGATAT+TGG 0.372165 2_1:-16819511 Msa0198220:CDS
CTATATGTTCCCTTCGTTGA+AGG 0.376889 2_1:-16816286 Msa0198220:three_prime_UTR
CCCCTTTGCAGTTATTAGAA+TGG 0.380554 2_1:-16819522 Msa0198220:intron
CTATGTTATTGAGTGGCTAA+TGG 0.381925 2_1:-16819716 Msa0198220:CDS
AAGGTACTATAATCCTTAAA+AGG 0.385912 2_1:-16816524 Msa0198220:three_prime_UTR
CAAAGCTATGACTGTGGAAA+TGG 0.386950 2_1:+16816759 None:intergenic
TCCTTGTGGTACTGTGGAAA+TGG 0.388446 2_1:-16819224 Msa0198220:CDS
ATATTAGTGGCAGGTGGTAT+TGG 0.391857 2_1:-16818641 Msa0198220:CDS
CTTGAAGGAAAATGAAGCTT+AGG 0.393980 2_1:+16819075 None:intergenic
GCCACTTACATCAAGTGATA+TGG 0.399229 2_1:+16818838 None:intergenic
GCTGATAACTCCTGCTAGAT+TGG 0.399708 2_1:+16819483 None:intergenic
CAAGTGTTGCACAAGAAATC+AGG 0.401849 2_1:-16816820 Msa0198220:CDS
CAGCTACTAAATGGACTCTT+AGG 0.404900 2_1:-16821655 Msa0198220:CDS
TTGCATACCTAATTATTTCT+GGG 0.411386 2_1:-16821223 Msa0198220:CDS
CTATATAAATCCAGTTGGAT+TGG 0.422614 2_1:-16817911 Msa0198220:CDS
AGTCCTTTGCTTTCTAAGAA+AGG 0.424385 2_1:-16821728 Msa0198220:CDS
TATGTCATTTCATCTACCTT+AGG 0.424790 2_1:-16817967 Msa0198220:CDS
CACCATATAACCAATCCAAC+TGG 0.430042 2_1:+16817901 None:intergenic
TAATGATAATATTCACATAA+AGG 0.431733 2_1:+16816462 None:intergenic
AGAAATGCAATTGCAAGAAC+AGG 0.433105 2_1:+16821251 None:intergenic
AAAGTCCATAGGCGAAATCT+TGG 0.434354 2_1:+16820878 None:intergenic
GTACGAAAACCTTATATTAG+TGG 0.439883 2_1:-16818654 Msa0198220:CDS
TTTCTATGCTTATACTATGC+AGG 0.442358 2_1:-16820768 Msa0198220:CDS
TGATTATGGAATGTCTGGTT+TGG 0.443470 2_1:-16818022 Msa0198220:CDS
GCTTCGGTTGAGGGGCCATA+TGG 0.449802 2_1:-16818871 Msa0198220:CDS
GAAAGTATACCTTTAAAGTC+TGG 0.452123 2_1:+16817658 None:intergenic
CCTAGTGATTATGGAATGTC+TGG 0.452709 2_1:-16818027 Msa0198220:CDS
CCCCAAATGGTCCATTGATA+AGG 0.454422 2_1:+16820849 None:intergenic
AAATTCCACGTTCGCACTCC+AGG 0.454972 2_1:+16819424 None:intergenic
ATGCTGCAAAATATCATGTA+TGG 0.457558 2_1:-16819783 Msa0198220:CDS
GTGGTAACAGCTTCGGTTGA+GGG 0.460759 2_1:-16818880 Msa0198220:CDS
AGAACAGATCCCCTTGAAAT+CGG 0.461594 2_1:+16819835 None:intergenic
TTGTAGCTGGTTTGTTGATG+TGG 0.462418 2_1:-16819459 Msa0198220:CDS
GTTTCTGCAACAGAGCTCAT+TGG 0.463709 2_1:-16820824 Msa0198220:CDS
ATCTTCGGTGGTATAGTGGT+TGG 0.467954 2_1:-16817832 Msa0198220:CDS
TAGGCGAAATCTTGGATACT+TGG 0.468997 2_1:+16820886 None:intergenic
ACAGGAAACAATTTCTGGTC+TGG 0.469821 2_1:-16817994 Msa0198220:CDS
AAGTTAACTACCATACAGTA+TGG 0.471321 2_1:-16817688 Msa0198220:CDS
TTCTCCATCGTGTGAGGGAT+GGG 0.474532 2_1:-16818586 Msa0198220:CDS
ACGATAATTCCCGAACTTGA+AGG 0.476050 2_1:+16819060 None:intergenic
AGTATCCAAGATTTCGCCTA+TGG 0.476533 2_1:-16820883 Msa0198220:CDS
CACATTAAATTTCATTTCAG+TGG 0.478013 2_1:-16821950 Msa0198220:five_prime_UTR
GTTGCAGGTGTAGTTATCTT+CGG 0.483407 2_1:-16817847 Msa0198220:CDS
TGTAGCTGGTTTGTTGATGT+GGG 0.488112 2_1:-16819458 Msa0198220:CDS
CGGGATTGGATTAATGTGCT+TGG 0.488988 2_1:-16819872 Msa0198220:CDS
CGCTTCCTGGAGTGCGAACG+TGG 0.494322 2_1:-16819429 Msa0198220:CDS
GGAACTTCCTTTGGAATCAC+AGG 0.496264 2_1:-16821530 Msa0198220:intron
GTGTTCATGGCTTTGCATAT+TGG 0.498872 2_1:-16819358 Msa0198220:CDS
TGGTTATATGGTGGTACAAA+GGG 0.499086 2_1:-16817891 Msa0198220:CDS
GGAGTTATCAGCCTTGTAGC+TGG 0.499164 2_1:-16819472 Msa0198220:CDS
TATGGAATGTCTGGTTTGGT+TGG 0.500105 2_1:-16818018 Msa0198220:CDS
AAATGGAAGATGGGGTGATA+AGG 0.501290 2_1:+16816776 None:intergenic
AAACACGTAAATATAGTAAG+TGG 0.502199 2_1:+16821838 None:intergenic
GGAAAAGCAAAGTTCTCTAA+AGG 0.503179 2_1:-16817794 Msa0198220:CDS
GAAGCTGTTACCACCGTATG+AGG 0.505127 2_1:+16818889 None:intergenic
ATTGGTGTTGCCAATCTAGC+AGG 0.509235 2_1:-16819493 Msa0198220:CDS
AGTTATCTTCGGTGGTATAG+TGG 0.510123 2_1:-16817836 Msa0198220:CDS
TATGGTACTTCGTGTCCATA+TGG 0.512922 2_1:+16818856 None:intergenic
AAGTAAGATCACAAAGCCTA+AGG 0.519858 2_1:+16817951 None:intergenic
GGTGGTAACAGCTTCGGTTG+AGG 0.520485 2_1:-16818881 Msa0198220:CDS
CACTGAAATGAAATTTAATG+TGG 0.520500 2_1:+16821951 None:intergenic
ATGTCTGGTTTGGTTGGTAC+AGG 0.521130 2_1:-16818012 Msa0198220:CDS
TTGAAGGAAAATGAAGCTTA+GGG 0.521409 2_1:+16819076 None:intergenic
GCAAAATATCATGTATGGCT+AGG 0.522260 2_1:-16819778 Msa0198220:CDS
TGAGGTTCTGCCAATCAAGA+AGG 0.523056 2_1:-16819276 Msa0198220:CDS
TATATTGTATATATAGTAGC+AGG 0.523200 2_1:-16816668 Msa0198220:three_prime_UTR
TCATACGGTGGTAACAGCTT+CGG 0.525366 2_1:-16818887 Msa0198220:CDS
AATATGATTACCTTCAACGA+AGG 0.530107 2_1:+16816276 None:intergenic
TTTATTTATACCGATTTCAA+GGG 0.530400 2_1:-16819845 Msa0198220:CDS
ATTTACTATATAAATCCAGT+TGG 0.531760 2_1:-16817916 Msa0198220:CDS
ATTCTCCATCGTGTGAGGGA+TGG 0.535286 2_1:-16818587 Msa0198220:CDS
TGGCCTAGAGCCATACTGTA+TGG 0.535994 2_1:+16817678 None:intergenic
GTTGCAGAAACAACCCCAAA+TGG 0.541339 2_1:+16820836 None:intergenic
TTTATCTGTTCAGCCTCATA+CGG 0.542802 2_1:-16818902 Msa0198220:intron
ACTTCTTTCGACCGTTGACA+TGG 0.543973 2_1:-16818501 Msa0198220:CDS
TCACCTTTCTTAGAAAGCAA+AGG 0.544082 2_1:+16821725 None:intergenic
GACTCTTCTATGTTATTGAG+TGG 0.545334 2_1:-16819723 Msa0198220:CDS
GCAACACTTGACTGAAGAGT+TGG 0.545843 2_1:+16816833 None:intergenic
ATGACTGTGGAAATGGAAGA+TGG 0.548444 2_1:+16816766 None:intergenic
CTACCATACAGTATGGCTCT+AGG 0.555352 2_1:-16817681 Msa0198220:CDS
TGCATACCTAATTATTTCTG+GGG 0.557842 2_1:-16821222 Msa0198220:CDS
GATGTTGGTATTCTAGTTTG+TGG 0.558214 2_1:-16816860 Msa0198220:CDS
AGAAATAATTAGGTATGCAA+TGG 0.558493 2_1:+16821226 None:intergenic
ACACTTGACTGAAGAGTTGG+AGG 0.558505 2_1:+16816836 None:intergenic
TTGGTTATATGGTGGTACAA+AGG 0.558838 2_1:-16817892 Msa0198220:CDS
GGGCTAGAAGAAACACTGAA+TGG 0.559675 2_1:+16819023 None:intergenic
GAAAACCTTATATTAGTGGC+AGG 0.559997 2_1:-16818650 Msa0198220:CDS
ATACCTAATTATTTCTGGGG+AGG 0.562304 2_1:-16821219 Msa0198220:CDS
TAAATATAGTAAGTGGGAGA+AGG 0.563544 2_1:+16821845 None:intergenic
GGGAATTATCGTGGCTTCAG+TGG 0.567364 2_1:-16819049 Msa0198220:CDS
TGTTATTATCTGCAGGAAGA+GGG 0.567707 2_1:-16818093 Msa0198220:intron
CCAGACATTCCATAATCACT+AGG 0.567995 2_1:+16818027 None:intergenic
TTCAAGTTCGGGAATTATCG+TGG 0.568443 2_1:-16819058 Msa0198220:CDS
ATCTGTTCAGCCTCATACGG+TGG 0.568522 2_1:-16818899 Msa0198220:intron
CAATAACATAGAAGAGTCCA+TGG 0.569129 2_1:+16819728 None:intergenic
AAATGGCTTAATTTCAGCAG+TGG 0.569517 2_1:-16821551 Msa0198220:CDS
TTAATCCAATCCCGCCCGAA+CGG 0.573743 2_1:+16819881 None:intergenic
AAAATATTTCTTGGTCGACA+AGG 0.574465 2_1:+16818560 None:intergenic
ACATCAACAAACCAGCTACA+AGG 0.574690 2_1:+16819461 None:intergenic
ATGTCAACGGTCGAAAGAAG+TGG 0.576179 2_1:+16818503 None:intergenic
TGTACATATCTTCGTCACTC+GGG 0.579762 2_1:-16818438 Msa0198220:CDS
TAATCACTAGGCATAGGAAA+GGG 0.580384 2_1:+16818039 None:intergenic
TTATGCTTGATCGATTTCTG+AGG 0.584264 2_1:-16819294 Msa0198220:CDS
TGACTGTGGAAATGGAAGAT+GGG 0.586819 2_1:+16816767 None:intergenic
GGATAAGTCCAATAACATCA+AGG 0.590579 2_1:-16817773 Msa0198220:CDS
TGGTAACAGCTTCGGTTGAG+GGG 0.591607 2_1:-16818879 Msa0198220:CDS
CCTTATCAATGGACCATTTG+GGG 0.593226 2_1:-16820849 Msa0198220:CDS
TCGGGAATCAGATCCTCCAT+TGG 0.593505 2_1:-16818420 Msa0198220:intron
AATGGTCCATTGATAAGGAT+CGG 0.593738 2_1:+16820854 None:intergenic
CTCTATAAGGAACTCTGAGT+GGG 0.593858 2_1:-16816500 Msa0198220:three_prime_UTR
ATGTACATATCTTCGTCACT+CGG 0.595377 2_1:-16818439 Msa0198220:CDS
AAATGGCTCTGTGGATCACA+AGG 0.597424 2_1:-16817734 Msa0198220:CDS
ACAGATTGTTTCCATGTCAA+CGG 0.597655 2_1:+16818490 None:intergenic
ATTCCATAATCACTAGGCAT+AGG 0.598212 2_1:+16818033 None:intergenic
ACTGAAATGAAATTTAATGT+GGG 0.600368 2_1:+16821952 None:intergenic
CGATATTCTCCATCGTGTGA+GGG 0.600683 2_1:-16818591 Msa0198220:CDS
TCGCTCAATATAGCAAGGAA+AGG 0.600792 2_1:+16818611 None:intergenic
GTTATTGAGTGGCTAATGGA+AGG 0.601090 2_1:-16819712 Msa0198220:CDS
GCGATATTCTCCATCGTGTG+AGG 0.601408 2_1:-16818592 Msa0198220:CDS
ATAATCACTAGGCATAGGAA+AGG 0.604094 2_1:+16818038 None:intergenic
ATGTGGGGATAATATAGTAG+AGG 0.604376 2_1:+16821968 None:intergenic
AACACGTAAATATAGTAAGT+GGG 0.604909 2_1:+16821839 None:intergenic
ATATGATTACCTTCAACGAA+GGG 0.606366 2_1:+16816277 None:intergenic
GTGCCTTCCTTGTGGTACTG+TGG 0.609460 2_1:-16819230 Msa0198220:CDS
GAAGACATACCTTCAACCAA+TGG 0.610433 2_1:-16816704 Msa0198220:three_prime_UTR
GCTACTACTTGTAGTCTGCA+TGG 0.612275 2_1:-16817869 Msa0198220:CDS
AAGAAAGGTGATGAAACTGA+TGG 0.618638 2_1:-16821713 Msa0198220:CDS
CGTTCGCACTCCAGGAAGCG+AGG 0.620245 2_1:+16819432 None:intergenic
CAGTTGGATTGGTTATATGG+TGG 0.622983 2_1:-16817900 Msa0198220:CDS
GAATATCGCTCAATATAGCA+AGG 0.623134 2_1:+16818606 None:intergenic
GACTGTGGAAATGGAAGATG+GGG 0.624675 2_1:+16816768 None:intergenic
CGAAAGGGATATCTATGAAG+CGG 0.625285 2_1:+16819809 None:intergenic
TGTATTACCTGTGATTCCAA+AGG 0.625397 2_1:+16821523 None:intergenic
TGTGGGGATAATATAGTAGA+GGG 0.626067 2_1:+16821969 None:intergenic
CTGAAATGAAATTTAATGTG+GGG 0.626071 2_1:+16821953 None:intergenic
TTATTTATACCGATTTCAAG+GGG 0.626114 2_1:-16819844 Msa0198220:CDS
AGAGATCAAAGCTATGACTG+TGG 0.626232 2_1:+16816753 None:intergenic
TTACCATCAGAATCTGTGCA+TGG 0.626896 2_1:-16821584 Msa0198220:CDS
TCATCGAGGTGCCTTCCTTG+TGG 0.629616 2_1:-16819238 Msa0198220:CDS
GCAGGTGTAGTTATCTTCGG+TGG 0.630037 2_1:-16817844 Msa0198220:CDS
ACTCTATAAGGAACTCTGAG+TGG 0.632677 2_1:-16816501 Msa0198220:three_prime_UTR
AATCCATGCACAGATTCTGA+TGG 0.634212 2_1:+16821581 None:intergenic
AAAGTTAGACTAACCAATGG+AGG 0.635530 2_1:+16818407 None:intergenic
TTTCCACAGTACCACAAGGA+AGG 0.637164 2_1:+16819227 None:intergenic
TAAGGATCGGAAAAGTCCAT+AGG 0.639419 2_1:+16820867 None:intergenic
AGTTATCATTTAGAGCCAAG+AGG 0.648631 2_1:-16820724 Msa0198220:intron
TTTACTTTATCAGAAAAGCG+TGG 0.652331 2_1:+16818467 None:intergenic
AACCTTATATTAGTGGCAGG+TGG 0.653585 2_1:-16818647 Msa0198220:CDS
AAATGGGGCCATGTTGATGT+TGG 0.654368 2_1:-16816875 Msa0198220:CDS
AATTGAGCAAAATGGCTCTG+TGG 0.663882 2_1:-16817743 Msa0198220:CDS
GAATCAATGTCAGAGAAATG+GGG 0.666449 2_1:-16816890 Msa0198220:CDS
GTTTCCCATCCCTCACACGA+TGG 0.667021 2_1:+16818582 None:intergenic
CTAGAATACCAACATCAACA+TGG 0.673063 2_1:+16816867 None:intergenic
ACCATTTCCACAGTACCACA+AGG 0.680934 2_1:+16819223 None:intergenic
ATGGCTAGGACACCTCACAA+TGG 0.732994 2_1:-16819764 Msa0198220:CDS
CAGTAAATGTAATCTCATCG+AGG 0.756992 2_1:-16819252 Msa0198220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTATTAGTTTATTT+GGG + chr2_1:16817660-16817679 None:intergenic 10.0%
!!! AAGAAATATTTTAATTGTTT+GGG - chr2_1:16819668-16819687 Msa0198220:intron 10.0%
!!! AAAAAATGTCATATTTTTAT+CGG - chr2_1:16820950-16820969 Msa0198220:intron 10.0%
!! AATATTAAGGTAAAAATATG+AGG + chr2_1:16816321-16816340 None:intergenic 15.0%
!!! TTTTTACCTTAATATTATCA+TGG - chr2_1:16816325-16816344 Msa0198220:three_prime_UTR 15.0%
!!! TTTTACCTTAATATTATCAT+GGG - chr2_1:16816326-16816345 Msa0198220:three_prime_UTR 15.0%
!!! AATTTCTGAAAATAAAGAAA+TGG + chr2_1:16817534-16817553 None:intergenic 15.0%
!!! GTTTCTTTTATTAGTTTATT+TGG + chr2_1:16817661-16817680 None:intergenic 15.0%
!!! CTTTTTAATTTTTCAGTTTA+TGG + chr2_1:16817826-16817845 None:intergenic 15.0%
!! TCTTTAATAAAAACAAACTA+GGG + chr2_1:16817966-16817985 None:intergenic 15.0%
!! AAAGTTAAAACTCTTAAAAT+GGG + chr2_1:16818081-16818100 None:intergenic 15.0%
!! AAAAGTTAAAACTCTTAAAA+TGG + chr2_1:16818082-16818101 None:intergenic 15.0%
!! ATTATGTAAAGATAAGTAAA+TGG + chr2_1:16818669-16818688 None:intergenic 15.0%
!! TTACTTATCTTTACATAATT+TGG - chr2_1:16818670-16818689 Msa0198220:intron 15.0%
!! CAATAAAGATTATGTATAAT+TGG + chr2_1:16818840-16818859 None:intergenic 15.0%
!! CAAACAATTAAAATATTTCT+TGG + chr2_1:16819669-16819688 None:intergenic 15.0%
!!! CAAGAAATATTTTAATTGTT+TGG - chr2_1:16819667-16819686 Msa0198220:intron 15.0%
!! TAATGATAATATTCACATAA+AGG + chr2_1:16821758-16821777 None:intergenic 15.0%
!! AAAGAAAAACAAGTTTATAA+GGG + chr2_1:16821814-16821833 None:intergenic 15.0%
!! TAAAGAAAAACAAGTTTATA+AGG + chr2_1:16821815-16821834 None:intergenic 15.0%
!! AATAATATGTGCTTATAATT+TGG + chr2_1:16821851-16821870 None:intergenic 15.0%
!! ACTGAAATGAAATTTAATGT+GGG + chr2_1:16816268-16816287 None:intergenic 20.0%
!! TTTCCATAATCTTCATTATA+TGG - chr2_1:16816592-16816611 Msa0198220:three_prime_UTR 20.0%
!! TTCCATAATCTTCATTATAT+GGG - chr2_1:16816593-16816612 Msa0198220:three_prime_UTR 20.0%
!!! GAAATTAATTCGAGTTTAAT+TGG + chr2_1:16817248-16817267 None:intergenic 20.0%
!!! TTTTGATATTGTTTTTGACA+TGG - chr2_1:16817284-16817303 Msa0198220:intron 20.0%
!!! TTTTTTTGGCATATGTTATT+TGG - chr2_1:16817424-16817443 Msa0198220:intron 20.0%
!!! TTTTTTGGCATATGTTATTT+GGG - chr2_1:16817425-16817444 Msa0198220:intron 20.0%
!!! ATGCAAATTACTTTGTTTAA+TGG - chr2_1:16817563-16817582 Msa0198220:intron 20.0%
!! TAAAGAAAAAAATTCATGCA+TGG + chr2_1:16817589-16817608 None:intergenic 20.0%
!! ATTCCAATATGAATTGAAAT+TGG - chr2_1:16817726-16817745 Msa0198220:CDS 20.0%
!! CTCTTTAATAAAAACAAACT+AGG + chr2_1:16817967-16817986 None:intergenic 20.0%
!! AAGTTAAAACTCTTAAAATG+GGG + chr2_1:16818080-16818099 None:intergenic 20.0%
!!! AAAAATCAATTTGAAGCAAA+AGG + chr2_1:16818142-16818161 None:intergenic 20.0%
!! ATATGATAAGTTAATTTACC+TGG - chr2_1:16818266-16818285 Msa0198220:intron 20.0%
!!! TTTTATTTATACCGATTTCA+AGG - chr2_1:16818371-16818390 Msa0198220:intron 20.0%
!!! TTTATTTATACCGATTTCAA+GGG - chr2_1:16818372-16818391 Msa0198220:intron 20.0%
!! TTATTAGAATGGAAAGATAT+TGG - chr2_1:16818706-16818725 Msa0198220:intron 20.0%
!! TCAAGCATAAAAAGAAATAT+TGG + chr2_1:16818913-16818932 None:intergenic 20.0%
!! ATTTACTATATAAATCCAGT+TGG - chr2_1:16820301-16820320 Msa0198220:intron 20.0%
!! TCTTAATATCAATACATGAA+AGG - chr2_1:16820606-16820625 Msa0198220:intron 20.0%
!! ATGATTCATAAGAATGAATT+GGG + chr2_1:16820778-16820797 None:intergenic 20.0%
!! AATGATTCATAAGAATGAAT+TGG + chr2_1:16820779-16820798 None:intergenic 20.0%
!!! ATAGTAAGATACTTTTTTTG+TGG - chr2_1:16820840-16820859 Msa0198220:CDS 20.0%
!! TATATTGTATATATAGTAGC+AGG - chr2_1:16821549-16821568 Msa0198220:CDS 20.0%
!!! AATATTTTGCACTTGTAATA+TGG - chr2_1:16821611-16821630 Msa0198220:CDS 20.0%
! CTGAAATGAAATTTAATGTG+GGG + chr2_1:16816267-16816286 None:intergenic 25.0%
! CACTGAAATGAAATTTAATG+TGG + chr2_1:16816269-16816288 None:intergenic 25.0%
! CACATTAAATTTCATTTCAG+TGG - chr2_1:16816267-16816286 Msa0198220:three_prime_UTR 25.0%
! TGAGGATCATAAAAAATGTT+GGG + chr2_1:16816303-16816322 None:intergenic 25.0%
! ATGAGGATCATAAAAAATGT+TGG + chr2_1:16816304-16816323 None:intergenic 25.0%
! AACACGTAAATATAGTAAGT+GGG + chr2_1:16816381-16816400 None:intergenic 25.0%
! AAACACGTAAATATAGTAAG+TGG + chr2_1:16816382-16816401 None:intergenic 25.0%
!!! TGATTTCTTGCTTTTTGTTT+TGG - chr2_1:16816735-16816754 Msa0198220:exon 25.0%
!!! AATCTTGTTTTTTCACTATG+TGG - chr2_1:16816880-16816899 Msa0198220:CDS 25.0%
! AGAAATAATTAGGTATGCAA+TGG + chr2_1:16816994-16817013 None:intergenic 25.0%
! ATTGCATACCTAATTATTTC+TGG - chr2_1:16816993-16817012 Msa0198220:intron 25.0%
!! TTGCATACCTAATTATTTCT+GGG - chr2_1:16816994-16817013 Msa0198220:intron 25.0%
! ATTAATCCAATGTACAGATA+CGG + chr2_1:16817059-16817078 None:intergenic 25.0%
! ACATACTAATGAAACATGAT+TGG + chr2_1:16817117-16817136 None:intergenic 25.0%
! TAGTTCCTAAAATATCTCTT+CGG - chr2_1:16817150-16817169 Msa0198220:intron 25.0%
!!! CATTGGAATTGTCATTTTTT+TGG - chr2_1:16817410-16817429 Msa0198220:intron 25.0%
!!! TAATTTTTCAGTTTATGGAG+AGG + chr2_1:16817821-16817840 None:intergenic 25.0%
! AGAAAAATATTTGCAAACTC+TGG + chr2_1:16817919-16817938 None:intergenic 25.0%
! TTAAAACAAGAATCTTGACA+TGG - chr2_1:16818100-16818119 Msa0198220:intron 25.0%
! AAATTACATGATCATTGCAA+AGG + chr2_1:16818233-16818252 None:intergenic 25.0%
! GAAAAAAAGTTAAGTAAACC+AGG + chr2_1:16818287-16818306 None:intergenic 25.0%
!!! TTATTTATACCGATTTCAAG+GGG - chr2_1:16818373-16818392 Msa0198220:intron 25.0%
! CATAATCTTTATTGTGTTCA+TGG - chr2_1:16818846-16818865 Msa0198220:intron 25.0%
! AAATAAGTACACTTACTTTG+TGG + chr2_1:16819030-16819049 None:intergenic 25.0%
! TATATTGTCACTGTTACATA+TGG + chr2_1:16819090-16819109 None:intergenic 25.0%
!!! TGTGATTTTTTCCATCTAAA+GGG + chr2_1:16819217-16819236 None:intergenic 25.0%
!!! ATGTGATTTTTTCCATCTAA+AGG + chr2_1:16819218-16819237 None:intergenic 25.0%
!! AGTTAGCTTAAAATCTACTT+TGG + chr2_1:16819476-16819495 None:intergenic 25.0%
!! TGTGTTCATTTTGTTCTATT+AGG - chr2_1:16819541-16819560 Msa0198220:intron 25.0%
! CCTTTCTATTATTCAAAGTT+AGG + chr2_1:16819958-16819977 None:intergenic 25.0%
! CCTAACTTTGAATAATAGAA+AGG - chr2_1:16819955-16819974 Msa0198220:intron 25.0%
!!! CTTTTGAATGTTTAAAACCA+CGG - chr2_1:16820073-16820092 Msa0198220:intron 25.0%
!! ATTTGATTGTTATTATCTGC+AGG - chr2_1:16820117-16820136 Msa0198220:intron 25.0%
! TTTATCAACCTTGATGTTAT+TGG + chr2_1:16820455-16820474 None:intergenic 25.0%
!! GTTGATAAAATTGAGCAAAA+TGG - chr2_1:16820466-16820485 Msa0198220:intron 25.0%
!! TTGTGAATCGAATTTTACTA+TGG + chr2_1:16820992-16821011 None:intergenic 25.0%
! GTAAAATTCGATTCACAATT+TGG - chr2_1:16820994-16821013 Msa0198220:intron 25.0%
!! AGTACCTTTTTATCTTACAA+TGG + chr2_1:16821681-16821700 None:intergenic 25.0%
!! AAGGTACTATAATCCTTAAA+AGG - chr2_1:16821693-16821712 Msa0198220:CDS 25.0%
! AAACAAGTTTATAAGGGTTA+TGG + chr2_1:16821808-16821827 None:intergenic 25.0%
TGGAACCCATGATAATATTA+AGG + chr2_1:16816334-16816353 None:intergenic 30.0%
GGAAAAAGATGAAAACATTG+TGG + chr2_1:16816354-16816373 None:intergenic 30.0%
TAAATATAGTAAGTGGGAGA+AGG + chr2_1:16816375-16816394 None:intergenic 30.0%
TGAGTCATTTCTTGTAACTA+TGG - chr2_1:16816446-16816465 Msa0198220:three_prime_UTR 30.0%
AGCCCATATAATGAAGATTA+TGG + chr2_1:16816598-16816617 None:intergenic 30.0%
!!! CTTGCTTTTTGTTTTGGTTT+TGG - chr2_1:16816741-16816760 Msa0198220:exon 30.0%
!! TGCATACCTAATTATTTCTG+GGG - chr2_1:16816995-16817014 Msa0198220:intron 30.0%
TATGTAGAAATCACATACTC+AGG + chr2_1:16817032-16817051 None:intergenic 30.0%
TGATTGGATATTTACACTGA+CGG + chr2_1:16817101-16817120 None:intergenic 30.0%
! GATATCCGAAGAGATATTTT+AGG + chr2_1:16817158-16817177 None:intergenic 30.0%
! GTTTTTGACATGGATTTTGA+TGG - chr2_1:16817294-16817313 Msa0198220:intron 30.0%
TTTCTATGCTTATACTATGC+AGG - chr2_1:16817449-16817468 Msa0198220:intron 30.0%
TAGTGAGATTAAGATAACAC+TGG - chr2_1:16817694-16817713 Msa0198220:CDS 30.0%
CCTCCAATTTCAATTCATAT+TGG + chr2_1:16817732-16817751 None:intergenic 30.0%
CCAATATGAATTGAAATTGG+AGG - chr2_1:16817729-16817748 Msa0198220:CDS 30.0%
GCATAGAAGTCTCAAAATTT+GGG + chr2_1:16817862-16817881 None:intergenic 30.0%
AGCATAGAAGTCTCAAAATT+TGG + chr2_1:16817863-16817882 None:intergenic 30.0%
TTTATTAAAGAGTCCCACAT+CGG - chr2_1:16817975-16817994 Msa0198220:CDS 30.0%
TCTGAACACGTGTTTATAAA+TGG - chr2_1:16818010-16818029 Msa0198220:CDS 30.0%
CTGAACACGTGTTTATAAAT+GGG - chr2_1:16818011-16818030 Msa0198220:CDS 30.0%
TGAACACGTGTTTATAAATG+GGG - chr2_1:16818012-16818031 Msa0198220:CDS 30.0%
! TTGCACATGTTGGAAATTTT+GGG - chr2_1:16818310-16818329 Msa0198220:intron 30.0%
ATGCTGCAAAATATCATGTA+TGG - chr2_1:16818434-16818453 Msa0198220:CDS 30.0%
TGTTATCCTAAATCCTTCAA+AGG - chr2_1:16818611-16818630 Msa0198220:CDS 30.0%
TAATCAACAACTACCTTTGA+AGG + chr2_1:16818627-16818646 None:intergenic 30.0%
! CAAAGGTAGTTGTTGATTAT+TGG - chr2_1:16818628-16818647 Msa0198220:CDS 30.0%
TCCATTCTAATAACTGCAAA+GGG + chr2_1:16818699-16818718 None:intergenic 30.0%
TTCCATTCTAATAACTGCAA+AGG + chr2_1:16818700-16818719 None:intergenic 30.0%
TTGAAGGAAAATGAAGCTTA+GGG + chr2_1:16819144-16819163 None:intergenic 30.0%
! TCACATTGCTGTTCTTATTA+AGG - chr2_1:16819232-16819251 Msa0198220:CDS 30.0%
TTATTAAGGTTCTTGGCAAA+TGG - chr2_1:16819246-16819265 Msa0198220:CDS 30.0%
TTAAGAGAAAGAATCACTGA+AGG - chr2_1:16819277-16819296 Msa0198220:CDS 30.0%
GTACGAAAACCTTATATTAG+TGG - chr2_1:16819563-16819582 Msa0198220:intron 30.0%
AAAATATTTCTTGGTCGACA+AGG + chr2_1:16819660-16819679 None:intergenic 30.0%
TTTACTTTATCAGAAAAGCG+TGG + chr2_1:16819753-16819772 None:intergenic 30.0%
TAGAAAGTTAGACTAACCAA+TGG + chr2_1:16819816-16819835 None:intergenic 30.0%
!! TTTCTTCGATTTGTGTCTTT+TGG - chr2_1:16819851-16819870 Msa0198220:CDS 30.0%
! TATGTCATTTCATCTACCTT+AGG - chr2_1:16820250-16820269 Msa0198220:intron 30.0%
CTATATAAATCCAGTTGGAT+TGG - chr2_1:16820306-16820325 Msa0198220:intron 30.0%
AAGTTAACTACCATACAGTA+TGG - chr2_1:16820529-16820548 Msa0198220:intron 30.0%
!! GAAAGTATACCTTTAAAGTC+TGG + chr2_1:16820562-16820581 None:intergenic 30.0%
ATCAAATCGATATGAATCTC+TGG - chr2_1:16820696-16820715 Msa0198220:intron 30.0%
! TTTTATCGGTAGTGTATCTT+AGG - chr2_1:16820964-16820983 Msa0198220:intron 30.0%
CGATTCACAATTTGGAAATT+TGG - chr2_1:16821002-16821021 Msa0198220:intron 30.0%
TGTAAAAAAGGGACTAATAC+TGG + chr2_1:16821259-16821278 None:intergenic 30.0%
!!! TTAGTCCCTTTTTTACAATG+TGG - chr2_1:16821262-16821281 Msa0198220:CDS 30.0%
CTCTTCCACATTGTAAAAAA+GGG + chr2_1:16821270-16821289 None:intergenic 30.0%
TTGAATCAATGTCAGAGAAA+TGG - chr2_1:16821325-16821344 Msa0198220:intron 30.0%
TGAATCAATGTCAGAGAAAT+GGG - chr2_1:16821326-16821345 Msa0198220:intron 30.0%
! CTCTAGCTTCATTTCTTTAA+TGG - chr2_1:16821483-16821502 Msa0198220:intron 30.0%
! ATATATGCATGCTTTTCCAT+TGG + chr2_1:16821532-16821551 None:intergenic 30.0%
CAGTCCATTGTAAGATAAAA+AGG - chr2_1:16821674-16821693 Msa0198220:CDS 30.0%
ATCCTTAAAAGGACTCTATA+AGG - chr2_1:16821704-16821723 Msa0198220:CDS 30.0%
! TTCCTTATAGAGTCCTTTTA+AGG + chr2_1:16821709-16821728 None:intergenic 30.0%
ATATGATTACCTTCAACGAA+GGG + chr2_1:16821943-16821962 None:intergenic 30.0%
AATATGATTACCTTCAACGA+AGG + chr2_1:16821944-16821963 None:intergenic 30.0%
TGTGGGGATAATATAGTAGA+GGG + chr2_1:16816251-16816270 None:intergenic 35.0%
ATGTGGGGATAATATAGTAG+AGG + chr2_1:16816252-16816271 None:intergenic 35.0%
! AGTCCTTTGCTTTCTAAGAA+AGG - chr2_1:16816489-16816508 Msa0198220:three_prime_UTR 35.0%
TCACCTTTCTTAGAAAGCAA+AGG + chr2_1:16816495-16816514 None:intergenic 35.0%
AAGAAAGGTGATGAAACTGA+TGG - chr2_1:16816504-16816523 Msa0198220:three_prime_UTR 35.0%
GTAGCTGACACAACAAAATT+AGG + chr2_1:16816549-16816568 None:intergenic 35.0%
TTGTTGTGTCAGCTACTAAA+TGG - chr2_1:16816553-16816572 Msa0198220:three_prime_UTR 35.0%
! TGCATGGATTGTTCACAAAA+TGG - chr2_1:16816649-16816668 Msa0198220:three_prime_UTR 35.0%
AAATGGCTTAATTTCAGCAG+TGG - chr2_1:16816666-16816685 Msa0198220:three_prime_UTR 35.0%
TGTATTACCTGTGATTCCAA+AGG + chr2_1:16816697-16816716 None:intergenic 35.0%
AGAAATGCAATTGCAAGAAC+AGG + chr2_1:16816969-16816988 None:intergenic 35.0%
!! ATACCTAATTATTTCTGGGG+AGG - chr2_1:16816998-16817017 Msa0198220:intron 35.0%
TACTTTCCGTATCTGTACAT+TGG - chr2_1:16817050-16817069 Msa0198220:intron 35.0%
! ACTTTTCCGATCCTTATCAA+TGG - chr2_1:16817357-16817376 Msa0198220:intron 35.0%
AATGGTCCATTGATAAGGAT+CGG + chr2_1:16817366-16817385 None:intergenic 35.0%
ATCCTTATCAATGGACCATT+TGG - chr2_1:16817366-16817385 Msa0198220:intron 35.0%
TCCTTATCAATGGACCATTT+GGG - chr2_1:16817367-16817386 Msa0198220:intron 35.0%
! AGTTATCATTTAGAGCCAAG+AGG - chr2_1:16817493-16817512 Msa0198220:intron 35.0%
TTCTAAACTGTAGTACCTCT+TGG + chr2_1:16817511-16817530 None:intergenic 35.0%
TTGACAGTGCTTATTAACCA+CGG - chr2_1:16817787-16817806 Msa0198220:CDS 35.0%
!!! ATTTTGAGACTTCTATGCTG+AGG - chr2_1:16817864-16817883 Msa0198220:CDS 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG - chr2_1:16818054-16818073 Msa0198220:CDS 35.0%
GTCGGTAATACTTAAGACAA+AGG + chr2_1:16818166-16818185 None:intergenic 35.0%
TCCATGCTAATGACTATTGT+CGG + chr2_1:16818184-16818203 None:intergenic 35.0%
!!! TTTTTTCAGCTTGCACATGT+TGG - chr2_1:16818300-16818319 Msa0198220:intron 35.0%
! CTTGCACATGTTGGAAATTT+TGG - chr2_1:16818309-16818328 Msa0198220:intron 35.0%
! ATTTTGCAGCATGTTCGAAA+GGG + chr2_1:16818426-16818445 None:intergenic 35.0%
! TATTTTGCAGCATGTTCGAA+AGG + chr2_1:16818427-16818446 None:intergenic 35.0%
GCAAAATATCATGTATGGCT+AGG - chr2_1:16818439-16818458 Msa0198220:CDS 35.0%
GAGTAAAAATCACCATTGTG+AGG + chr2_1:16818468-16818487 None:intergenic 35.0%
! ATGGTGATTTTTACTCTCCA+TGG - chr2_1:16818472-16818491 Msa0198220:CDS 35.0%
CAATAACATAGAAGAGTCCA+TGG + chr2_1:16818492-16818511 None:intergenic 35.0%
GACTCTTCTATGTTATTGAG+TGG - chr2_1:16818494-16818513 Msa0198220:CDS 35.0%
CTATGTTATTGAGTGGCTAA+TGG - chr2_1:16818501-16818520 Msa0198220:CDS 35.0%
GAAGACTCACTTCTTGAATT+AGG + chr2_1:16818534-16818553 None:intergenic 35.0%
! CAACTACCTTTGAAGGATTT+AGG + chr2_1:16818620-16818639 None:intergenic 35.0%
CATTCTAATAACTGCAAAGG+GGG + chr2_1:16818697-16818716 None:intergenic 35.0%
CCATTCTAATAACTGCAAAG+GGG + chr2_1:16818698-16818717 None:intergenic 35.0%
!!! TGGCGACTTTATTTTTGCTA+TGG - chr2_1:16818879-16818898 Msa0198220:CDS 35.0%
!!! TTTATTTTTGCTATGGCTGC+TGG - chr2_1:16818886-16818905 Msa0198220:CDS 35.0%
! TTATGCTTGATCGATTTCTG+AGG - chr2_1:16818923-16818942 Msa0198220:intron 35.0%
CATTTACTGTCCTTCTTGAT+TGG + chr2_1:16818954-16818973 None:intergenic 35.0%
CAGTAAATGTAATCTCATCG+AGG - chr2_1:16818965-16818984 Msa0198220:intron 35.0%
CTTGAAGGAAAATGAAGCTT+AGG + chr2_1:16819145-16819164 None:intergenic 35.0%
!! GCTTCATTTTCCTTCAAGTT+CGG - chr2_1:16819147-16819166 Msa0198220:intron 35.0%
!! CTTCATTTTCCTTCAAGTTC+GGG - chr2_1:16819148-16819167 Msa0198220:intron 35.0%
GCTGTTCTTATTAAGGTTCT+TGG - chr2_1:16819239-16819258 Msa0198220:CDS 35.0%
TTTATCTGTTCAGCCTCATA+CGG - chr2_1:16819315-16819334 Msa0198220:CDS 35.0%
ACCATATCACTTGATGTAAG+TGG - chr2_1:16819378-16819397 Msa0198220:CDS 35.0%
GAAAACCTTATATTAGTGGC+AGG - chr2_1:16819567-16819586 Msa0198220:intron 35.0%
GAATATCGCTCAATATAGCA+AGG + chr2_1:16819614-16819633 None:intergenic 35.0%
ACAGATTGTTTCCATGTCAA+CGG + chr2_1:16819730-16819749 None:intergenic 35.0%
ATGTACATATCTTCGTCACT+CGG - chr2_1:16819778-16819797 Msa0198220:CDS 35.0%
AAAGTTAGACTAACCAATGG+AGG + chr2_1:16819813-16819832 None:intergenic 35.0%
! TTGTTATTATCTGCAGGAAG+AGG - chr2_1:16820123-16820142 Msa0198220:intron 35.0%
TGTTATTATCTGCAGGAAGA+GGG - chr2_1:16820124-16820143 Msa0198220:intron 35.0%
! AAGGGACAGAGTGATTTTAT+TGG + chr2_1:16820163-16820182 None:intergenic 35.0%
TAATCACTAGGCATAGGAAA+GGG + chr2_1:16820181-16820200 None:intergenic 35.0%
ATAATCACTAGGCATAGGAA+AGG + chr2_1:16820182-16820201 None:intergenic 35.0%
TTTCCTATGCCTAGTGATTA+TGG - chr2_1:16820181-16820200 Msa0198220:intron 35.0%
ATTCCATAATCACTAGGCAT+AGG + chr2_1:16820187-16820206 None:intergenic 35.0%
TGATTATGGAATGTCTGGTT+TGG - chr2_1:16820195-16820214 Msa0198220:intron 35.0%
TTGGTACAGGAAACAATTTC+TGG - chr2_1:16820218-16820237 Msa0198220:intron 35.0%
AAGTAAGATCACAAAGCCTA+AGG + chr2_1:16820269-16820288 None:intergenic 35.0%
!! ATCCAGTTGGATTGGTTATA+TGG - chr2_1:16820314-16820333 Msa0198220:intron 35.0%
TTGGTTATATGGTGGTACAA+AGG - chr2_1:16820325-16820344 Msa0198220:intron 35.0%
TGGTTATATGGTGGTACAAA+GGG - chr2_1:16820326-16820345 Msa0198220:intron 35.0%
GGAAAAGCAAAGTTCTCTAA+AGG - chr2_1:16820423-16820442 Msa0198220:intron 35.0%
GGATAAGTCCAATAACATCA+AGG - chr2_1:16820444-16820463 Msa0198220:intron 35.0%
TGTCTGACTACACTAAGTTT+AGG + chr2_1:16820803-16820822 None:intergenic 35.0%
CGATTCACGATTTGAAAAGT+AGG - chr2_1:16821106-16821125 Msa0198220:intron 35.0%
TGAATCACTTATCATGAGCT+TGG - chr2_1:16821168-16821187 Msa0198220:intron 35.0%
CCTCTTCCACATTGTAAAAA+AGG + chr2_1:16821271-16821290 None:intergenic 35.0%
!!! CCTTTTTTACAATGTGGAAG+AGG - chr2_1:16821268-16821287 Msa0198220:CDS 35.0%
TGTGGAAGAGGTTACTAATA+TGG - chr2_1:16821280-16821299 Msa0198220:CDS 35.0%
GAATCAATGTCAGAGAAATG+GGG - chr2_1:16821327-16821346 Msa0198220:intron 35.0%
CTAGAATACCAACATCAACA+TGG + chr2_1:16821353-16821372 None:intergenic 35.0%
!! GATGTTGGTATTCTAGTTTG+TGG - chr2_1:16821357-16821376 Msa0198220:intron 35.0%
! CAGCTACTAAATGGACTCTT+AGG - chr2_1:16816562-16816581 Msa0198220:three_prime_UTR 40.0%
TTACCATCAGAATCTGTGCA+TGG - chr2_1:16816633-16816652 Msa0198220:three_prime_UTR 40.0%
AATCCATGCACAGATTCTGA+TGG + chr2_1:16816639-16816658 None:intergenic 40.0%
AAACTACTTGTGTGTTGTGC+AGG - chr2_1:16816918-16816937 Msa0198220:intron 40.0%
GATCCTCCCCAGAAATAATT+AGG + chr2_1:16817004-16817023 None:intergenic 40.0%
!! TTGACATGGATTTTGATGGC+AGG - chr2_1:16817298-16817317 Msa0198220:intron 40.0%
TAGGCGAAATCTTGGATACT+TGG + chr2_1:16817334-16817353 None:intergenic 40.0%
AGTATCCAAGATTTCGCCTA+TGG - chr2_1:16817334-16817353 Msa0198220:intron 40.0%
AAAGTCCATAGGCGAAATCT+TGG + chr2_1:16817342-16817361 None:intergenic 40.0%
TAAGGATCGGAAAAGTCCAT+AGG + chr2_1:16817353-16817372 None:intergenic 40.0%
CCTTATCAATGGACCATTTG+GGG - chr2_1:16817368-16817387 Msa0198220:intron 40.0%
AACCTCTTGAAACCAGTCTT+TGG - chr2_1:16817608-16817627 Msa0198220:intron 40.0%
!! TACCAAAGACTGGTTTCAAG+AGG + chr2_1:16817613-16817632 None:intergenic 40.0%
AACCAGTCTTTGGTACGTTA+AGG - chr2_1:16817618-16817637 Msa0198220:intron 40.0%
TTCCTTAACGTACCAAAGAC+TGG + chr2_1:16817623-16817642 None:intergenic 40.0%
CAGTTTATGGAGAGGATTGT+TGG + chr2_1:16817813-16817832 None:intergenic 40.0%
! AGCCATATTTTGTCCGATGT+GGG + chr2_1:16817991-16818010 None:intergenic 40.0%
ACCGACAATAGTCATTAGCA+TGG - chr2_1:16818180-16818199 Msa0198220:intron 40.0%
AGAACAGATCCCCTTGAAAT+CGG + chr2_1:16818385-16818404 None:intergenic 40.0%
CGAAAGGGATATCTATGAAG+CGG + chr2_1:16818411-16818430 None:intergenic 40.0%
GTTATTGAGTGGCTAATGGA+AGG - chr2_1:16818505-16818524 Msa0198220:CDS 40.0%
CCCCTTTGCAGTTATTAGAA+TGG - chr2_1:16818695-16818714 Msa0198220:intron 40.0%
ACATCAACAAACCAGCTACA+AGG + chr2_1:16818759-16818778 None:intergenic 40.0%
!! TTGTAGCTGGTTTGTTGATG+TGG - chr2_1:16818758-16818777 Msa0198220:intron 40.0%
!! TGTAGCTGGTTTGTTGATGT+GGG - chr2_1:16818759-16818778 Msa0198220:intron 40.0%
! GTGTTCATGGCTTTGCATAT+TGG - chr2_1:16818859-16818878 Msa0198220:CDS 40.0%
ACGATAATTCCCGAACTTGA+AGG + chr2_1:16819160-16819179 None:intergenic 40.0%
! TTCAAGTTCGGGAATTATCG+TGG - chr2_1:16819159-16819178 Msa0198220:intron 40.0%
GTTTCTTCTAGCCCTTTAGA+TGG - chr2_1:16819203-16819222 Msa0198220:intron 40.0%
TGATTCTTTCTCTTAACCCC+CGG + chr2_1:16819273-16819292 None:intergenic 40.0%
TATGGTACTTCGTGTCCATA+TGG + chr2_1:16819364-16819383 None:intergenic 40.0%
GCCACTTACATCAAGTGATA+TGG + chr2_1:16819382-16819401 None:intergenic 40.0%
AACCTTATATTAGTGGCAGG+TGG - chr2_1:16819570-16819589 Msa0198220:intron 40.0%
TACCACCTGCCACTAATATA+AGG + chr2_1:16819575-16819594 None:intergenic 40.0%
ATATTAGTGGCAGGTGGTAT+TGG - chr2_1:16819576-16819595 Msa0198220:intron 40.0%
TCGCTCAATATAGCAAGGAA+AGG + chr2_1:16819609-16819628 None:intergenic 40.0%
TGTACATATCTTCGTCACTC+GGG - chr2_1:16819779-16819798 Msa0198220:CDS 40.0%
! ATGTTTAAAACCACGGTCGT+CGG - chr2_1:16820080-16820099 Msa0198220:intron 40.0%
CCAGACATTCCATAATCACT+AGG + chr2_1:16820193-16820212 None:intergenic 40.0%
CCTAGTGATTATGGAATGTC+TGG - chr2_1:16820190-16820209 Msa0198220:intron 40.0%
!! TATGGAATGTCTGGTTTGGT+TGG - chr2_1:16820199-16820218 Msa0198220:intron 40.0%
!! ACAGGAAACAATTTCTGGTC+TGG - chr2_1:16820223-16820242 Msa0198220:intron 40.0%
CACCATATAACCAATCCAAC+TGG + chr2_1:16820319-16820338 None:intergenic 40.0%
!! CAGTTGGATTGGTTATATGG+TGG - chr2_1:16820317-16820336 Msa0198220:intron 40.0%
GTTGCAGGTGTAGTTATCTT+CGG - chr2_1:16820370-16820389 Msa0198220:intron 40.0%
AGTTATCTTCGGTGGTATAG+TGG - chr2_1:16820381-16820400 Msa0198220:intron 40.0%
! GTGGTATAGTGGTTGGATTT+TGG - chr2_1:16820392-16820411 Msa0198220:intron 40.0%
!! TGGTTGGATTTTGGCATATG+TGG - chr2_1:16820401-16820420 Msa0198220:intron 40.0%
!! GGTTGGATTTTGGCATATGT+GGG - chr2_1:16820402-16820421 Msa0198220:intron 40.0%
! AATTGAGCAAAATGGCTCTG+TGG - chr2_1:16820474-16820493 Msa0198220:intron 40.0%
TGGGATTCACCATAGAGAAT+CGG + chr2_1:16820759-16820778 None:intergenic 40.0%
CGCAAAATAAGCTCAAAGCA+AGG + chr2_1:16821063-16821082 None:intergenic 40.0%
! CAAGTGTTGCACAAGAAATC+AGG - chr2_1:16821397-16821416 Msa0198220:intron 40.0%
AAATGGAAGATGGGGTGATA+AGG + chr2_1:16821444-16821463 None:intergenic 40.0%
TGACTGTGGAAATGGAAGAT+GGG + chr2_1:16821453-16821472 None:intergenic 40.0%
ATGACTGTGGAAATGGAAGA+TGG + chr2_1:16821454-16821473 None:intergenic 40.0%
CAAAGCTATGACTGTGGAAA+TGG + chr2_1:16821461-16821480 None:intergenic 40.0%
AGAGATCAAAGCTATGACTG+TGG + chr2_1:16821467-16821486 None:intergenic 40.0%
GAAGACATACCTTCAACCAA+TGG - chr2_1:16821513-16821532 Msa0198220:intron 40.0%
!! CATGCTTTTCCATTGGTTGA+AGG + chr2_1:16821525-16821544 None:intergenic 40.0%
ACTCTATAAGGAACTCTGAG+TGG - chr2_1:16821716-16821735 Msa0198220:CDS 40.0%
CTCTATAAGGAACTCTGAGT+GGG - chr2_1:16821717-16821736 Msa0198220:CDS 40.0%
CTATATGTTCCCTTCGTTGA+AGG - chr2_1:16821931-16821950 Msa0198220:five_prime_UTR 40.0%
TTCAGCAGTGGAACTTCCTT+TGG - chr2_1:16816678-16816697 Msa0198220:three_prime_UTR 45.0%
!! GGAACTTCCTTTGGAATCAC+AGG - chr2_1:16816687-16816706 Msa0198220:three_prime_UTR 45.0%
CCCCAAATGGTCCATTGATA+AGG + chr2_1:16817371-16817390 None:intergenic 45.0%
GTTGCAGAAACAACCCCAAA+TGG + chr2_1:16817384-16817403 None:intergenic 45.0%
GTTTCTGCAACAGAGCTCAT+TGG - chr2_1:16817393-16817412 Msa0198220:intron 45.0%
GTCCCACATCGGACAAAATA+TGG - chr2_1:16817986-16818005 Msa0198220:CDS 45.0%
! GAGCCATATTTTGTCCGATG+TGG + chr2_1:16817992-16818011 None:intergenic 45.0%
CCTTACAAAACCAGCTTGTG+AGG + chr2_1:16818047-16818066 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+AGG - chr2_1:16818044-16818063 Msa0198220:CDS 45.0%
!!! GGAAATTTTGGGACTCCGTT+CGG - chr2_1:16818321-16818340 Msa0198220:intron 45.0%
!!! GAAATTTTGGGACTCCGTTC+GGG - chr2_1:16818322-16818341 Msa0198220:intron 45.0%
CGGGATTGGATTAATGTGCT+TGG - chr2_1:16818345-16818364 Msa0198220:intron 45.0%
!! ATTGGTGTTGCCAATCTAGC+AGG - chr2_1:16818724-16818743 Msa0198220:intron 45.0%
GCTGATAACTCCTGCTAGAT+TGG + chr2_1:16818737-16818756 None:intergenic 45.0%
TGAGGTTCTGCCAATCAAGA+AGG - chr2_1:16818941-16818960 Msa0198220:intron 45.0%
TTTCCACAGTACCACAAGGA+AGG + chr2_1:16818993-16819012 None:intergenic 45.0%
TCCTTGTGGTACTGTGGAAA+TGG - chr2_1:16818993-16819012 Msa0198220:CDS 45.0%
ACCATTTCCACAGTACCACA+AGG + chr2_1:16818997-16819016 None:intergenic 45.0%
GGGCTAGAAGAAACACTGAA+TGG + chr2_1:16819197-16819216 None:intergenic 45.0%
AAGGTTCTTGGCAAATGGAC+CGG - chr2_1:16819251-16819270 Msa0198220:CDS 45.0%
TCATACGGTGGTAACAGCTT+CGG - chr2_1:16819330-16819349 Msa0198220:CDS 45.0%
CGATATTCTCCATCGTGTGA+GGG - chr2_1:16819626-16819645 Msa0198220:intron 45.0%
ATGTCAACGGTCGAAAGAAG+TGG + chr2_1:16819717-16819736 None:intergenic 45.0%
ACTTCTTTCGACCGTTGACA+TGG - chr2_1:16819716-16819735 Msa0198220:CDS 45.0%
GTCGTAGATGTAGGCACAAT+TGG - chr2_1:16819999-16820018 Msa0198220:intron 45.0%
!! ATGTCTGGTTTGGTTGGTAC+AGG - chr2_1:16820205-16820224 Msa0198220:intron 45.0%
GCTACTACTTGTAGTCTGCA+TGG - chr2_1:16820348-16820367 Msa0198220:intron 45.0%
ATCTTCGGTGGTATAGTGGT+TGG - chr2_1:16820385-16820404 Msa0198220:intron 45.0%
! AAATGGCTCTGTGGATCACA+AGG - chr2_1:16820483-16820502 Msa0198220:intron 45.0%
CTACCATACAGTATGGCTCT+AGG - chr2_1:16820536-16820555 Msa0198220:intron 45.0%
TCTTGAGTCCCGATTCTCTA+TGG - chr2_1:16820747-16820766 Msa0198220:CDS 45.0%
GGGATTCACCATAGAGAATC+GGG + chr2_1:16820758-16820777 None:intergenic 45.0%
AAATGGGGCCATGTTGATGT+TGG - chr2_1:16821342-16821361 Msa0198220:intron 45.0%
ACACTTGACTGAAGAGTTGG+AGG + chr2_1:16821384-16821403 None:intergenic 45.0%
GCAACACTTGACTGAAGAGT+TGG + chr2_1:16821387-16821406 None:intergenic 45.0%
GACTGTGGAAATGGAAGATG+GGG + chr2_1:16821452-16821471 None:intergenic 45.0%
GTAATCCTCACCTCACAAGC+TGG - chr2_1:16818034-16818053 Msa0198220:CDS 50.0%
CAAAACCAGCTTGTGAGGTG+AGG + chr2_1:16818042-16818061 None:intergenic 50.0%
TTAATCCAATCCCGCCCGAA+CGG + chr2_1:16818339-16818358 None:intergenic 50.0%
ATGGCTAGGACACCTCACAA+TGG - chr2_1:16818453-16818472 Msa0198220:CDS 50.0%
! GGAGTTATCAGCCTTGTAGC+TGG - chr2_1:16818745-16818764 Msa0198220:intron 50.0%
AAATTCCACGTTCGCACTCC+AGG + chr2_1:16818796-16818815 None:intergenic 50.0%
GGGAATTATCGTGGCTTCAG+TGG - chr2_1:16819168-16819187 Msa0198220:intron 50.0%
AGGTTCTTGGCAAATGGACC+GGG - chr2_1:16819252-16819271 Msa0198220:CDS 50.0%
ATCTGTTCAGCCTCATACGG+TGG - chr2_1:16819318-16819337 Msa0198220:CDS 50.0%
GAAGCTGTTACCACCGTATG+AGG + chr2_1:16819331-16819350 None:intergenic 50.0%
GTGGTAACAGCTTCGGTTGA+GGG - chr2_1:16819337-16819356 Msa0198220:CDS 50.0%
TGGTAACAGCTTCGGTTGAG+GGG - chr2_1:16819338-16819357 Msa0198220:CDS 50.0%
GCGATATTCTCCATCGTGTG+AGG - chr2_1:16819625-16819644 Msa0198220:intron 50.0%
ATTCTCCATCGTGTGAGGGA+TGG - chr2_1:16819630-16819649 Msa0198220:intron 50.0%
TTCTCCATCGTGTGAGGGAT+GGG - chr2_1:16819631-16819650 Msa0198220:intron 50.0%
TCGGGAATCAGATCCTCCAT+TGG - chr2_1:16819797-16819816 Msa0198220:CDS 50.0%
CATCTACGACTGCAGAGAGT+GGG + chr2_1:16819989-16820008 None:intergenic 50.0%
ACATCTACGACTGCAGAGAG+TGG + chr2_1:16819990-16820009 None:intergenic 50.0%
CTCTCTGCAGTCGTAGATGT+AGG - chr2_1:16819990-16820009 Msa0198220:intron 50.0%
CTTGTAGTCTGCATGGTTGC+AGG - chr2_1:16820355-16820374 Msa0198220:intron 50.0%
GCAGGTGTAGTTATCTTCGG+TGG - chr2_1:16820373-16820392 Msa0198220:intron 50.0%
TGGCCTAGAGCCATACTGTA+TGG + chr2_1:16820542-16820561 None:intergenic 50.0%
!! GGCTCTAGGCCAGACTTTAA+AGG - chr2_1:16820550-16820569 Msa0198220:intron 50.0%
ATGGAGAGGATTGTTGGCCG+TGG + chr2_1:16817807-16817826 None:intergenic 55.0%
!!! ATTTTGGGACTCCGTTCGGG+CGG - chr2_1:16818325-16818344 Msa0198220:intron 55.0%
! TCATCGAGGTGCCTTCCTTG+TGG - chr2_1:16818979-16818998 Msa0198220:intron 55.0%
GTGCCTTCCTTGTGGTACTG+TGG - chr2_1:16818987-16819006 Msa0198220:CDS 55.0%
GGTTCTTGGCAAATGGACCG+GGG - chr2_1:16819253-16819272 Msa0198220:CDS 55.0%
GTTCTTGGCAAATGGACCGG+GGG - chr2_1:16819254-16819273 Msa0198220:CDS 55.0%
GGTGGTAACAGCTTCGGTTG+AGG - chr2_1:16819336-16819355 Msa0198220:CDS 55.0%
GTTTCCCATCCCTCACACGA+TGG + chr2_1:16819638-16819657 None:intergenic 55.0%
AGAATAGTGACCGACGACCG+TGG + chr2_1:16820093-16820112 None:intergenic 55.0%
!!! TTTTGGGACTCCGTTCGGGC+GGG - chr2_1:16818326-16818345 Msa0198220:intron 60.0%
ATGTGGGTGACCTCGCTTCC+TGG - chr2_1:16818775-16818794 Msa0198220:intron 60.0%
GCTTCGGTTGAGGGGCCATA+TGG - chr2_1:16819346-16819365 Msa0198220:CDS 60.0%
CGTTCGCACTCCAGGAAGCG+AGG + chr2_1:16818788-16818807 None:intergenic 65.0%
CGCTTCCTGGAGTGCGAACG+TGG - chr2_1:16818788-16818807 Msa0198220:intron 65.0%
GGACTCCGTTCGGGCGGGAT+TGG - chr2_1:16818331-16818350 Msa0198220:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 16816238 16822001 16816238 ID=Msa0198220;Name=Msa0198220
chr2_1 mRNA 16816238 16822001 16816238 ID=Msa0198220-mRNA-1;Parent=Msa0198220;Name=Msa0198220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=227|0.88|0.8|1|1|1|10|513|715
chr2_1 exon 16816238 16816920 16816238 ID=Msa0198220-mRNA-1:exon:7005;Parent=Msa0198220-mRNA-1
chr2_1 exon 16817668 16818100 16817668 ID=Msa0198220-mRNA-1:exon:7004;Parent=Msa0198220-mRNA-1
chr2_1 exon 16818421 16818676 16818421 ID=Msa0198220-mRNA-1:exon:7003;Parent=Msa0198220-mRNA-1
chr2_1 exon 16818847 16818911 16818847 ID=Msa0198220-mRNA-1:exon:7002;Parent=Msa0198220-mRNA-1
chr2_1 exon 16818986 16819113 16818986 ID=Msa0198220-mRNA-1:exon:7001;Parent=Msa0198220-mRNA-1
chr2_1 exon 16819206 16819533 16819206 ID=Msa0198220-mRNA-1:exon:7000;Parent=Msa0198220-mRNA-1
chr2_1 exon 16819696 16819930 16819696 ID=Msa0198220-mRNA-1:exon:6999;Parent=Msa0198220-mRNA-1
chr2_1 exon 16820725 16820919 16820725 ID=Msa0198220-mRNA-1:exon:6998;Parent=Msa0198220-mRNA-1
chr2_1 exon 16821206 16821299 16821206 ID=Msa0198220-mRNA-1:exon:6997;Parent=Msa0198220-mRNA-1
chr2_1 exon 16821531 16822001 16821531 ID=Msa0198220-mRNA-1:exon:6996;Parent=Msa0198220-mRNA-1
chr2_1 five_prime_UTR 16821775 16822001 16821775 ID=Msa0198220-mRNA-1:five_prime_utr;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16821531 16821774 16821531 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16821206 16821299 16821206 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16820725 16820919 16820725 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16819696 16819930 16819696 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16819206 16819533 16819206 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16818986 16819113 16818986 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16818847 16818911 16818847 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16818421 16818676 16818421 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16817668 16818100 16817668 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 CDS 16816751 16816920 16816751 ID=Msa0198220-mRNA-1:cds;Parent=Msa0198220-mRNA-1
chr2_1 three_prime_UTR 16816238 16816750 16816238 ID=Msa0198220-mRNA-1:three_prime_utr;Parent=Msa0198220-mRNA-1
Gene Sequence

>Msa0198220

ATGGAGAAAAATTCTGTTGATTATAGTCCTTTGCTTTCTAAGAAAGGTGATGAAACTGATGGTTATGTTAAAAAAAATTCACCTAATTTTGTTGTGTCAGCTACTAAATGGACTCTTAGGACTTTGATTTCCATAATCTTCATTATATGGGCTGCTTTCATTTTTCTGTTACCATCAGAATCTGTGCATGGATTGTTCACAAAATGGCTTAATTTCAGCAGTGGAACTTCCTTTGGAATCACAGGAAGCATTTTACTGATTCTCAGTGCTCCTGTTCTTGCAATTGCATTTCTTGCCATTGCATACCTAATTATTTCTGGGGAGGATCAGCTTCCTGAGAAGAAGACTTCCAAGTATCCAAGATTTCGCCTATGGACTTTTCCGATCCTTATCAATGGACCATTTGGGGTTGTTTCTGCAACAGAGCTCATTGGAATTGTCATTTTTTTGGCATATGTTATTTGGGCTTTCTATGCTTATACTATGCAGGCTCTTGCAGCTATGTCTTATCAGTTATCATTTAGAGCCAAGAGCTTGCACATGTTGGAAATTTTGGGACTCCGTTCGGGCGGGATTGGATTAATGTGCTTGGCGTTTTTATTTATACCGATTTCAAGGGGATCTGTTCTTCTCCGCTTCATAGATATCCCTTTCGAACATGCTGCAAAATATCATGTATGGCTAGGACACCTCACAATGGTGATTTTTACTCTCCATGGACTCTTCTATGTTATTGAGTGGCTAATGGAAGGTCACCTAATTCAAGAATTATTAGAATGGAAAGATATTGGTGTTGCCAATCTAGCAGGAGTTATCAGCCTTGTAGCTGGTTTGTTGATGTGGGTGACCTCGCTTCCTGGAGTGCGAACGTGGAATTTTGAGCTGTTTTTCTACACTCACCAATTATACATAATCTTTATTGTGTTCATGGCTTTGCATATTGGCGACTTTATTTTTGCTATGGCTGCTGGACCAATATTTCTTTTTATGCTTGATCGATTTCTGAGGTTCTGCCAATCAAGAAGGACAGTAAATGTAATCTCATCGAGGTGCCTTCCTTGTGGTACTGTGGAAATGGTTCTGTCAAAACCACAAAATTTGAGATACAATGCCCTAAGCTTCATTTTCCTTCAAGTTCGGGAATTATCGTGGCTTCAGTGGCATCCATTCAGTGTTTCTTCTAGCCCTTTAGATGGAAAAAATCACATTGCTGTTCTTATTAAGCCTCATACGGTGGTAACAGCTTCGGTTGAGGGGCCATATGGACACGAAGTACCATATCACTTGATGTACGAAAACCTTATATTAGTGGCAGGTGGTATTGGACTTTCGCCTTTCCTTGCTATATTGAGCGATATTCTCCATCGTGTGAGGGATGGGAAACCTTGTCGACCAAGAAATATTTTAATTGTTTGGGCAGTGAAAAAGTCAAATGAGCTTCCACTTCTTTCGACCGTTGACATGGAAACAATCTGTCCACGCTTTTCTGATAAAGTAAATATCAATGTACATATCTTCGTCACTCGGGAATCAGATCCTCCATTGGAAGAGGGATATAATTACAAACCAATAAAATCACTCTGTCCCTTTCCTATGCCTAGTGATTATGGAATGTCTGGTTTGGTTGGTACAGGAAACAATTTCTGGTCTGGACTATATGTCATTTCATCTACCTTAGGCTTTGTGATCTTACTTGCTTTGTTGAATATTTACTATATAAATCCAGTTGGATTGGTTATATGGTGGTACAAAGGGCTACTACTTGTAGTCTGCATGGTTGCAGGTGTAGTTATCTTCGGTGGTATAGTGGTTGGATTTTGGCATATGTGGGAAAAGCAAAGTTCTCTAAAGGATAAGTCCAATAACATCAAGGTTGATAAAATTGAGCAAAATGGCTCTGTGGATCACAAGGATCTAAGTCAATACAATATTGCAAAGTTAACTACCATACAGTATGGCTCTAGGCCAGACTTTAAAGAGATTTTTGAATCAATGTCAGAGAAATGGGGCCATGTTGATGTTGGTATTCTAGTTTGTGGTCCTCCAACTCTTCAGTCAAGTGTTGCACAAGAAATCAGGTCACATAGTTTGACAAGACAACCTTATCACCCCATCTTCCATTTCCACAGTCATAGCTTTGATCTCTAG
Protein sequence

>Msa0198220

MEKNSVDYSPLLSKKGDETDGYVKKNSPNFVVSATKWTLRTLISIIFIIWAAFIFLLPSESVHGLFTKWLNFSSGTSFGITGSILLILSAPVLAIAFLAIAYLIISGEDQLPEKKTSKYPRFRLWTFPILINGPFGVVSATELIGIVIFLAYVIWAFYAYTMQALAAMSYQLSFRAKSLHMLEILGLRSGGIGLMCLAFLFIPISRGSVLLRFIDIPFEHAAKYHVWLGHLTMVIFTLHGLFYVIEWLMEGHLIQELLEWKDIGVANLAGVISLVAGLLMWVTSLPGVRTWNFELFFYTHQLYIIFIVFMALHIGDFIFAMAAGPIFLFMLDRFLRFCQSRRTVNVISSRCLPCGTVEMVLSKPQNLRYNALSFIFLQVRELSWLQWHPFSVSSSPLDGKNHIAVLIKPHTVVTASVEGPYGHEVPYHLMYENLILVAGGIGLSPFLAILSDILHRVRDGKPCRPRNILIVWAVKKSNELPLLSTVDMETICPRFSDKVNINVHIFVTRESDPPLEEGYNYKPIKSLCPFPMPSDYGMSGLVGTGNNFWSGLYVISSTLGFVILLALLNIYYINPVGLVIWWYKGLLLVVCMVAGVVIFGGIVVGFWHMWEKQSSLKDKSNNIKVDKIEQNGSVDHKDLSQYNIAKLTTIQYGSRPDFKEIFESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTRQPYHPIFHFHSHSFDL*