Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465610 | XP_013461026.1 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465610 | sp|Q27GI3|NAT6_ARATH | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465610 | A0A072VA43 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017960 | Msa0465610 | 0.820160 | 7.944655e-53 | -8.615850e-47 |
| Msa0078500 | Msa0465610 | 0.805167 | 1.521653e-49 | -8.615850e-47 |
| Msa0108630 | Msa0465610 | 0.812186 | 4.811528e-51 | -8.615850e-47 |
| Msa0126210 | Msa0465610 | 0.804454 | 2.143164e-49 | -8.615850e-47 |
| Msa0465610 | Msa0511570 | 0.958826 | 8.985894e-117 | -8.615850e-47 |
| Msa0465610 | Msa0580940 | 0.821978 | 3.028133e-53 | -8.615850e-47 |
| Msa0465610 | Msa1216340 | 0.815279 | 1.002750e-51 | -8.615850e-47 |
| Msa0465610 | Msa1333500 | 0.839135 | 1.899421e-57 | -8.615850e-47 |
| Msa0465610 | Msa1368170 | 0.802132 | 6.486592e-49 | -8.615850e-47 |
| Msa0465610 | Msa1408160 | 0.826055 | 3.346045e-54 | -8.615850e-47 |
| Msa0465610 | Msa1448960 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0307280 | Msa0465610 | 0.800739 | 1.251405e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465610 | MtrunA17_Chr3g0117941 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Msa0465610 | MtrunA17_Chr4g0059331 | 90.602 | 532 | 50 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
| Msa0465610 | MtrunA17_Chr8g0364611 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
| Msa0465610 | MtrunA17_Chr5g0414131 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
| Msa0465610 | MtrunA17_Chr3g0134911 | 55.615 | 561 | 204 | 4 | 9 | 532 | 33 | 585 | 0.0 | 643 |
| Msa0465610 | MtrunA17_Chr1g0207021 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
| Msa0465610 | MtrunA17_Chr8g0379171 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0465610 | MtrunA17_Chr5g0405471 | 57.196 | 535 | 211 | 2 | 13 | 532 | 31 | 562 | 0.0 | 627 |
| Msa0465610 | MtrunA17_Chr2g0284061 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
| Msa0465610 | MtrunA17_Chr3g0119521 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
| Msa0465610 | MtrunA17_Chr1g0154001 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
| Msa0465610 | MtrunA17_Chr8g0367361 | 35.046 | 545 | 312 | 6 | 17 | 529 | 234 | 768 | 1.21e-107 | 338 |
| Msa0465610 | MtrunA17_Chr5g0412181 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 6.98e-104 | 327 |
| Msa0465610 | MtrunA17_Chr2g0320981 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 2.88e-94 | 301 |
| Msa0465610 | MtrunA17_Chr4g0027121 | 34.857 | 525 | 295 | 7 | 43 | 529 | 171 | 686 | 3.86e-93 | 298 |
| Msa0465610 | MtrunA17_Chr2g0332871 | 32.400 | 500 | 300 | 6 | 46 | 529 | 166 | 643 | 2.01e-83 | 272 |
| Msa0465610 | MtrunA17_Chr8g0379181 | 50.909 | 55 | 27 | 0 | 411 | 465 | 13 | 67 | 4.39e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465610 | AT5G62890.1 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0465610 | AT5G62890.2 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0465610 | AT5G62890.3 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0465610 | AT5G49990.2 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0465610 | AT5G49990.3 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0465610 | AT5G49990.1 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0465610 | AT5G49990.4 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0465610 | AT1G60030.1 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
| Msa0465610 | AT5G62890.4 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
| Msa0465610 | AT1G10540.1 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| Msa0465610 | AT1G49960.1 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
| Msa0465610 | AT2G34190.1 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0465610 | AT1G65550.1 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
| Msa0465610 | AT2G05760.1 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
| Msa0465610 | AT1G10540.2 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
| Msa0465610 | AT2G26510.1 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.74e-180 | 519 |
| Msa0465610 | AT5G25420.1 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.38e-143 | 420 |
| Msa0465610 | AT2G26510.3 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.98e-126 | 376 |
| Msa0465610 | AT2G26510.2 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.28e-120 | 360 |
| Msa0465610 | AT2G27810.1 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 7.11e-93 | 298 |
| Msa0465610 | AT4G38050.1 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.34e-92 | 297 |
| Msa0465610 | AT2G27810.4 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.43e-88 | 287 |
| Msa0465610 | AT2G27810.2 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.04e-78 | 258 |
| Msa0465610 | AT2G27810.3 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.15e-68 | 229 |
Find 154 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3_3:+66041127 | Msa0465610:intron |
| TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3_3:+66037515 | Msa0465610:CDS |
| GGGGTTGGCATTCTTCTATC+TGG | 0.251901 | 3_3:+66040784 | Msa0465610:CDS |
| CAGAGAAAATGCTGGTCTTT+TGG | 0.254875 | 3_3:+66040939 | Msa0465610:intron |
| GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3_3:+66037509 | Msa0465610:CDS |
| ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3_3:+66041385 | Msa0465610:CDS |
| ACATTGGTGCAAACACTCTT+TGG | 0.307293 | 3_3:+66036754 | Msa0465610:CDS |
| ATTCTTCTATCTGGATTGTT+TGG | 0.309588 | 3_3:+66040793 | Msa0465610:CDS |
| TCACGATTACCTGCAGTAAT+TGG | 0.310968 | 3_3:+66036778 | Msa0465610:CDS |
| GCAGCTGAGGCCATACTTCT+TGG | 0.316014 | 3_3:+66036508 | Msa0465610:intron |
| TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3_3:+66041368 | Msa0465610:CDS |
| GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3_3:+66040546 | Msa0465610:CDS |
| TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3_3:+66041196 | Msa0465610:CDS |
| TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3_3:+66041386 | Msa0465610:CDS |
| GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3_3:+66040589 | Msa0465610:CDS |
| TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3_3:+66037218 | Msa0465610:CDS |
| TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3_3:+66041437 | Msa0465610:CDS |
| CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3_3:+66037211 | Msa0465610:CDS |
| CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3_3:+66041721 | Msa0465610:CDS |
| GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3_3:-66039809 | None:intergenic |
| CACTGCTCTTGTTCCTCAGA+TGG | 0.382385 | 3_3:+66036576 | Msa0465610:CDS |
| AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3_3:-66036713 | None:intergenic |
| TAGACAACACTTTACATAAG+AGG | 0.388088 | 3_3:+66041761 | Msa0465610:CDS |
| GTAATGCAGTAAGAAATATT+TGG | 0.393915 | 3_3:-66035527 | None:intergenic |
| GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3_3:+66037162 | Msa0465610:CDS |
| ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3_3:-66035512 | None:intergenic |
| TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3_3:+66040596 | Msa0465610:CDS |
| TTTCGGTGGAGAACCGTTAT+AGG | 0.402300 | 3_3:-66037963 | None:intergenic |
| ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3_3:-66041358 | None:intergenic |
| ACTGCCAGAGCTTATATTGC+TGG | 0.410871 | 3_3:+66037672 | Msa0465610:CDS |
| ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3_3:-66036518 | None:intergenic |
| TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3_3:-66035497 | None:intergenic |
| TACAATGCAGCAATGATTGC+AGG | 0.417508 | 3_3:-66041172 | None:intergenic |
| GTAAATTCTGATCAAGAAAG+TGG | 0.431345 | 3_3:+66042082 | Msa0465610:three_prime_UTR |
| GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3_3:+66038017 | Msa0465610:CDS |
| TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3_3:+66040588 | Msa0465610:CDS |
| GTGCCACATGTGTTGCATTC+GGG | 0.438570 | 3_3:+66037857 | Msa0465610:CDS |
| GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3_3:+66039804 | Msa0465610:CDS |
| TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3_3:+66037496 | Msa0465610:CDS |
| AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3_3:-66041877 | None:intergenic |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3_3:+66040604 | Msa0465610:CDS |
| GTTGCTAAATGTGTAGAGAT+TGG | 0.455062 | 3_3:+66037649 | Msa0465610:CDS |
| CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3_3:-66041461 | None:intergenic |
| TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3_3:+66037202 | Msa0465610:CDS |
| AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3_3:-66035503 | None:intergenic |
| TTGCTGCTTGTAGGCGGAGA+AGG | 0.458011 | 3_3:+66036690 | Msa0465610:intron |
| ATTGCTGGTATTTGTTTCAC+AGG | 0.458880 | 3_3:+66037687 | Msa0465610:CDS |
| TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3_3:-66040583 | None:intergenic |
| GATAGGACCTCAATCGGATC+TGG | 0.462622 | 3_3:-66036865 | None:intergenic |
| CTGTTCTACTCACGGTTGGA+GGG | 0.467946 | 3_3:+66037939 | Msa0465610:CDS |
| GCTGTTCTACTCACGGTTGG+AGG | 0.472732 | 3_3:+66037938 | Msa0465610:CDS |
| TACGTGACAGTTCAATGATA+TGG | 0.473040 | 3_3:+66041684 | Msa0465610:intron |
| AGAATAATTGAGATTGTCGT+TGG | 0.473319 | 3_3:-66036820 | None:intergenic |
| TGAGATTGTCGTTGGAACAT+AGG | 0.474228 | 3_3:-66036812 | None:intergenic |
| GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3_3:+66035452 | Msa0465610:exon |
| AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3_3:+66040985 | Msa0465610:CDS |
| ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3_3:-66040593 | None:intergenic |
| TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3_3:-66041198 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3_3:+66040600 | Msa0465610:CDS |
| CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3_3:+66041462 | Msa0465610:CDS |
| AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3_3:+66039805 | Msa0465610:CDS |
| TAGAGTGGAGACTACTCATA+TGG | 0.492995 | 3_3:-66042011 | None:intergenic |
| GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3_3:-66036849 | None:intergenic |
| CGAAGCATTTGCCATGATGA+TGG | 0.493647 | 3_3:+66039850 | Msa0465610:CDS |
| TCTTCTGATAGGACCTCAAT+CGG | 0.502241 | 3_3:-66036871 | None:intergenic |
| GGATTGTTTGGAACAATTAG+CGG | 0.502285 | 3_3:+66040805 | Msa0465610:CDS |
| AATGATTGCAGGTGGGATAG+AGG | 0.502422 | 3_3:-66041161 | None:intergenic |
| TGTGCCACATGTGTTGCATT+CGG | 0.505553 | 3_3:+66037856 | Msa0465610:CDS |
| AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3_3:+66037152 | Msa0465610:intron |
| ATGAATGCATTGCTTGGTCA+TGG | 0.513485 | 3_3:-66042176 | None:intergenic |
| GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3_3:+66041822 | Msa0465610:CDS |
| TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3_3:+66037995 | Msa0465610:CDS |
| ACTGCTCTTGTTCCTCAGAT+GGG | 0.514976 | 3_3:+66036577 | Msa0465610:CDS |
| ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3_3:+66041438 | Msa0465610:CDS |
| GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3_3:+66041780 | Msa0465610:CDS |
| TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3_3:-66037996 | None:intergenic |
| CTTGTTCCTCAGATGGGAGG+TGG | 0.523430 | 3_3:+66036583 | Msa0465610:CDS |
| ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3_3:+66039874 | Msa0465610:CDS |
| TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3_3:+66037909 | Msa0465610:CDS |
| CATCGGTTTAATTAATTGTG+CGG | 0.526651 | 3_3:+66041902 | Msa0465610:exon |
| TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3_3:-66041759 | None:intergenic |
| TTTCCCTGCAGAGAAAATGC+TGG | 0.530895 | 3_3:+66040931 | Msa0465610:intron |
| ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3_3:-66037497 | None:intergenic |
| AGACAACACTTTACATAAGA+GGG | 0.533794 | 3_3:+66041762 | Msa0465610:CDS |
| TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3_3:+66035443 | Msa0465610:exon |
| ATCTGAGGAACAAGAGCAGT+GGG | 0.536762 | 3_3:-66036574 | None:intergenic |
| AATACCAGCAATATAAGCTC+TGG | 0.537388 | 3_3:-66037676 | None:intergenic |
| ACGGTTGGAGGGGCCTATAA+CGG | 0.537847 | 3_3:+66037950 | Msa0465610:CDS |
| AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3_3:+66041431 | Msa0465610:CDS |
| TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3_3:-66039816 | None:intergenic |
| AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3_3:+66041729 | Msa0465610:CDS |
| CGATTACCTGCAGTAATTGG+AGG | 0.545684 | 3_3:+66036781 | Msa0465610:CDS |
| TGAATGCATTGCTTGGTCAT+GGG | 0.546411 | 3_3:-66042175 | None:intergenic |
| TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3_3:-66035509 | None:intergenic |
| CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3_3:+66041720 | Msa0465610:CDS |
| GCTTCGCCTGCATCAAATGT+AGG | 0.551071 | 3_3:-66039833 | None:intergenic |
| TAAGACCCTCCAATTACTGC+AGG | 0.557300 | 3_3:-66036787 | None:intergenic |
| AGAAACTAACGCCATGGAGG+AGG | 0.558083 | 3_3:-66035554 | None:intergenic |
| GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3_3:+66037233 | Msa0465610:CDS |
| TATGCTGTTCTACTCACGGT+TGG | 0.561178 | 3_3:+66037935 | Msa0465610:CDS |
| AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3_3:+66041463 | Msa0465610:CDS |
| CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3_3:-66040584 | None:intergenic |
| GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3_3:-66039815 | None:intergenic |
| TCATCATTTGCAGGAGCTGG+AGG | 0.565976 | 3_3:+66041311 | Msa0465610:intron |
| AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3_3:-66039861 | None:intergenic |
| ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3_3:+66036826 | Msa0465610:CDS |
| ATCAGAATTTACAGAAACAA+GGG | 0.573191 | 3_3:-66042071 | None:intergenic |
| AATGCTATAAATTAATAGAG+TGG | 0.574867 | 3_3:-66042026 | None:intergenic |
| GGACAGAGGCAAACATTGGT+GGG | 0.574941 | 3_3:+66041801 | Msa0465610:CDS |
| TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3_3:+66035449 | Msa0465610:exon |
| TGTTGCTGGTATTAACACAT+TGG | 0.581871 | 3_3:+66036738 | Msa0465610:CDS |
| GATCAGAATTTACAGAAACA+AGG | 0.582186 | 3_3:-66042072 | None:intergenic |
| AGGTCAATGAATGCATTGCT+TGG | 0.582812 | 3_3:-66042182 | None:intergenic |
| GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3_3:+66035446 | Msa0465610:exon |
| AGGACAGAGGCAAACATTGG+TGG | 0.588315 | 3_3:+66041800 | Msa0465610:CDS |
| GGAGCACCTACATTTGATGC+AGG | 0.588577 | 3_3:+66039827 | Msa0465610:CDS |
| TGTTCTACTCACGGTTGGAG+GGG | 0.589482 | 3_3:+66037940 | Msa0465610:CDS |
| CGCACAATTAATTAAACCGA+TGG | 0.592039 | 3_3:-66041901 | None:intergenic |
| GAATGCATTGCTTGGTCATG+GGG | 0.596893 | 3_3:-66042174 | None:intergenic |
| GCATTACTAGTCCTCCTCCA+TGG | 0.599317 | 3_3:+66035543 | Msa0465610:CDS |
| GAAAGGACAGAGGCAAACAT+TGG | 0.599729 | 3_3:+66041797 | Msa0465610:CDS |
| ACATTTCCACCTCCCATCTG+AGG | 0.600265 | 3_3:-66036589 | None:intergenic |
| AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3_3:-66037512 | None:intergenic |
| GATATATGCTGTTCTACTCA+CGG | 0.606614 | 3_3:+66037931 | Msa0465610:CDS |
| CTGATATTAGAACTAGACTC+TGG | 0.607375 | 3_3:-66041960 | None:intergenic |
| TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3_3:+66036858 | Msa0465610:CDS |
| AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3_3:+66037163 | Msa0465610:CDS |
| ACAAGAGCGATAAGATAAAG+TGG | 0.611971 | 3_3:+66041926 | Msa0465610:three_prime_UTR |
| GCTCTTGTTCCTCAGATGGG+AGG | 0.615420 | 3_3:+66036580 | Msa0465610:CDS |
| GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3_3:+66037153 | Msa0465610:intron |
| AATGCAGCAATGATTGCAGG+TGG | 0.623862 | 3_3:-66041169 | None:intergenic |
| CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3_3:+66040590 | Msa0465610:CDS |
| ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3_3:-66037234 | None:intergenic |
| GATTACCTGCAGTAATTGGA+GGG | 0.629859 | 3_3:+66036782 | Msa0465610:CDS |
| TTTCCCGAATGCAACACATG+TGG | 0.633762 | 3_3:-66037860 | None:intergenic |
| ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3_3:-66041466 | None:intergenic |
| TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3_3:+66041455 | Msa0465610:CDS |
| CATCTGAGGAACAAGAGCAG+TGG | 0.642369 | 3_3:-66036575 | None:intergenic |
| GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3_3:+66041823 | Msa0465610:CDS |
| ACCACAACCACATCCACCAA+AGG | 0.644503 | 3_3:+66035496 | Msa0465610:CDS |
| TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3_3:-66040540 | None:intergenic |
| GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3_3:+66041452 | Msa0465610:CDS |
| CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3_3:+66041840 | Msa0465610:CDS |
| GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3_3:-66040833 | None:intergenic |
| ATGCAGCAATGATTGCAGGT+GGG | 0.675249 | 3_3:-66041168 | None:intergenic |
| AAAAGAAACTAACGCCATGG+AGG | 0.701039 | 3_3:-66035557 | None:intergenic |
| AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3_3:-66037180 | None:intergenic |
| AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3_3:-66040582 | None:intergenic |
| GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3_3:-66041419 | None:intergenic |
| TCATCTATTAGAAAGGACAG+AGG | 0.717827 | 3_3:+66041787 | Msa0465610:CDS |
| GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3_3:+66039806 | Msa0465610:CDS |
| CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3_3:-66040590 | None:intergenic |
| AATGCATTGCTTGGTCATGG+GGG | 0.733377 | 3_3:-66042173 | None:intergenic |
| TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3_3:-66038000 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGATTAAAATAAAATAAA+GGG | + | chr3_3:66035640-66035659 | Msa0465610:intron | 10.0% |
| !! | AATAAAGCAAAAAAAAAAAA+AGG | - | chr3_3:66037120-66037139 | None:intergenic | 10.0% |
| !! | GGTTGATTAAAATAAAATAA+AGG | + | chr3_3:66035639-66035658 | Msa0465610:intron | 15.0% |
| !!! | TTAATTAAGCATTGATATTA+AGG | + | chr3_3:66035804-66035823 | Msa0465610:intron | 15.0% |
| !!! | AATTAATTTGATGAGAAATT+TGG | + | chr3_3:66036473-66036492 | Msa0465610:intron | 15.0% |
| !!! | ATTAATTTGATGAGAAATTT+GGG | + | chr3_3:66036474-66036493 | Msa0465610:intron | 15.0% |
| !!! | TTTACTGAATACAATTTTTT+TGG | - | chr3_3:66037397-66037416 | None:intergenic | 15.0% |
| !!! | TCTTTGTTCTTTTAATATTA+TGG | + | chr3_3:66037787-66037806 | Msa0465610:intron | 15.0% |
| !!! | ACGCAAATTTTTTAAAATTT+AGG | + | chr3_3:66038996-66039015 | Msa0465610:intron | 15.0% |
| !!! | AATGAATAAATTTAAAGCTT+TGG | + | chr3_3:66039403-66039422 | Msa0465610:intron | 15.0% |
| !! | TTAAAAAAGAGAATATCATA+AGG | - | chr3_3:66039909-66039928 | None:intergenic | 15.0% |
| !!! | TGATATTCTCTTTTTTAAAT+TGG | + | chr3_3:66039911-66039930 | Msa0465610:intron | 15.0% |
| !!! | GATTGATTATTTTTATAAGA+GGG | - | chr3_3:66040127-66040146 | None:intergenic | 15.0% |
| !!! | TGATTGATTATTTTTATAAG+AGG | - | chr3_3:66040128-66040147 | None:intergenic | 15.0% |
| !! | ATATATATAATAGTACTGTA+AGG | + | chr3_3:66040299-66040318 | Msa0465610:intron | 15.0% |
| !! | TTTAACTATATAACTTGAAA+AGG | - | chr3_3:66040391-66040410 | None:intergenic | 15.0% |
| !! | ATAAATGATAATCGTAATAA+TGG | + | chr3_3:66040653-66040672 | Msa0465610:intron | 15.0% |
| !! | CAATTTCATTTATATAAACA+AGG | - | chr3_3:66040901-66040920 | None:intergenic | 15.0% |
| !! | CTTGTTTATATAAATGAAAT+TGG | + | chr3_3:66040899-66040918 | Msa0465610:intron | 15.0% |
| !! | AAATATTTGTTTAGATTGAA+AGG | - | chr3_3:66041880-66041899 | None:intergenic | 15.0% |
| !! | ATTCTCATTCATTATTTGTA+AGG | + | chr3_3:66035316-66035335 | Msa0465610:intron | 20.0% |
| !! | TAACATTATCTTCTTCATTA+AGG | + | chr3_3:66035346-66035365 | Msa0465610:intron | 20.0% |
| !! | GTATAAGAACATTATTTGTT+TGG | + | chr3_3:66035662-66035681 | Msa0465610:intron | 20.0% |
| !! | TATTTCTTACTTTATGTCAT+TGG | + | chr3_3:66035713-66035732 | Msa0465610:intron | 20.0% |
| !!! | TGCAAAAAGAATCTAAAATT+AGG | - | chr3_3:66035740-66035759 | None:intergenic | 20.0% |
| !!! | TGTTTGATTTCATTTTTAGA+GGG | - | chr3_3:66036162-66036181 | None:intergenic | 20.0% |
| !!! | ATGTTTGATTTCATTTTTAG+AGG | - | chr3_3:66036163-66036182 | None:intergenic | 20.0% |
| !!! | TATTCAGGTTGTTTTATTTT+TGG | + | chr3_3:66036242-66036261 | Msa0465610:intron | 20.0% |
| !!! | ATTCAGGTTGTTTTATTTTT+GGG | + | chr3_3:66036243-66036262 | Msa0465610:intron | 20.0% |
| !!! | TTAATTTGATGAGAAATTTG+GGG | + | chr3_3:66036475-66036494 | Msa0465610:intron | 20.0% |
| !!! | AATTTTTTTGGTGAATATCA+TGG | - | chr3_3:66037385-66037404 | None:intergenic | 20.0% |
| !! | AAATTCCTTATTCAAATCTT+TGG | + | chr3_3:66037415-66037434 | Msa0465610:intron | 20.0% |
| !! | TTGTGAATAAAACAGAAAAA+CGG | - | chr3_3:66037898-66037917 | None:intergenic | 20.0% |
| !! | ATAGATATTAAGGTAATTGT+GGG | - | chr3_3:66038929-66038948 | None:intergenic | 20.0% |
| !! | AGTTAAAATTATACTTCTTG+TGG | - | chr3_3:66039173-66039192 | None:intergenic | 20.0% |
| !!! | ACAAGAAGTATAATTTTAAC+TGG | + | chr3_3:66039172-66039191 | Msa0465610:intron | 20.0% |
| !! | GATTTGAAAAAAGAGAAAAT+TGG | - | chr3_3:66039475-66039494 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTGCCCTTATT+GGG | + | chr3_3:66039548-66039567 | Msa0465610:intron | 20.0% |
| !!! | GAATGAGTTTTAAAAATTAC+TGG | + | chr3_3:66040168-66040187 | Msa0465610:intron | 20.0% |
| !!! | AGTTTTAAAAATTACTGGTA+AGG | + | chr3_3:66040173-66040192 | Msa0465610:intron | 20.0% |
| !!! | TTTAATCCTGAAAAAACTTT+TGG | + | chr3_3:66040204-66040223 | Msa0465610:intron | 20.0% |
| !!! | AAAAAACTTTTGGTAATTGT+TGG | + | chr3_3:66040214-66040233 | Msa0465610:intron | 20.0% |
| !!! | AAAAACTTTTGGTAATTGTT+GGG | + | chr3_3:66040215-66040234 | Msa0465610:intron | 20.0% |
| !! | TTAAAACTTAGTTGCTAATT+TGG | + | chr3_3:66040406-66040425 | Msa0465610:intron | 20.0% |
| !!! | GAAAGTTTTACTTGATTTAT+AGG | - | chr3_3:66040720-66040739 | None:intergenic | 20.0% |
| !!! | ATGATTTTCTTTTCAATTCT+CGG | + | chr3_3:66041012-66041031 | Msa0465610:CDS | 20.0% |
| !!! | TTTAGAACAAAGTTCATATT+AGG | + | chr3_3:66041368-66041387 | Msa0465610:CDS | 20.0% |
| !!! | AAATATATTTTTTGCAGAGT+CGG | + | chr3_3:66041501-66041520 | Msa0465610:intron | 20.0% |
| !!! | TCTAAACAAATATTTTCCAT+CGG | + | chr3_3:66041885-66041904 | Msa0465610:CDS | 20.0% |
| !! | AATGCTATAAATTAATAGAG+TGG | - | chr3_3:66042029-66042048 | None:intergenic | 20.0% |
| !! | AATGACTAGTGTTGAAAAAA+AGG | - | chr3_3:66035299-66035318 | None:intergenic | 25.0% |
| ! | ATGAAGAAGATAATGTTACT+TGG | - | chr3_3:66035344-66035363 | None:intergenic | 25.0% |
| !!! | GTTTTTAGATTAAGAAGCTA+TGG | + | chr3_3:66035439-66035458 | Msa0465610:exon | 25.0% |
| ! | GTAATGCAGTAAGAAATATT+TGG | - | chr3_3:66035530-66035549 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTCTCTTAGATTC+TGG | + | chr3_3:66035574-66035593 | Msa0465610:intron | 25.0% |
| ! | GTATCTCATTATTCTTAATC+TGG | + | chr3_3:66035618-66035637 | Msa0465610:intron | 25.0% |
| ! | AGAACATTATTTGTTTGGTT+TGG | + | chr3_3:66035667-66035686 | Msa0465610:intron | 25.0% |
| ! | CTAGATCTAGAAAAAAAACT+GGG | - | chr3_3:66035835-66035854 | None:intergenic | 25.0% |
| ! | TCTAGATCTAGAAAAAAAAC+TGG | - | chr3_3:66035836-66035855 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTAGATCTAGAC+TGG | + | chr3_3:66035837-66035856 | Msa0465610:intron | 25.0% |
| ! | CTTACATCATAAGACTAATT+TGG | - | chr3_3:66035883-66035902 | None:intergenic | 25.0% |
| !! | GTTTCAAGTAGAATCATATT+TGG | + | chr3_3:66036062-66036081 | Msa0465610:intron | 25.0% |
| !! | AAAATTGATTCTCACATGTT+TGG | - | chr3_3:66036116-66036135 | None:intergenic | 25.0% |
| !!! | TTCAGGTTGTTTTATTTTTG+GGG | + | chr3_3:66036244-66036263 | Msa0465610:intron | 25.0% |
| ! | ATGTTTGAACAATGTTGTAA+AGG | + | chr3_3:66036306-66036325 | Msa0465610:intron | 25.0% |
| !! | TTTTGCGTAATTGGAATATT+TGG | + | chr3_3:66036331-66036350 | Msa0465610:intron | 25.0% |
| ! | GAATATTTGGCCAATTTAAA+TGG | + | chr3_3:66036344-66036363 | Msa0465610:intron | 25.0% |
| !! | AAGGAATATGCCATTTAAAT+TGG | - | chr3_3:66036357-66036376 | None:intergenic | 25.0% |
| ! | ACACAAACTACAAATAATCA+AGG | - | chr3_3:66036376-66036395 | None:intergenic | 25.0% |
| ! | TAACTATACTAAATGATGTG+TGG | + | chr3_3:66036896-66036915 | Msa0465610:intron | 25.0% |
| !! | GTAAATCATAGTCTCTATTT+TGG | - | chr3_3:66036959-66036978 | None:intergenic | 25.0% |
| ! | TTGGAGACACAATAAAAAAA+TGG | - | chr3_3:66036996-66037015 | None:intergenic | 25.0% |
| ! | ATCAAATAGCTACAAACTTA+AGG | - | chr3_3:66037068-66037087 | None:intergenic | 25.0% |
| ! | TAAGTTTGTAGCTATTTGAT+TGG | + | chr3_3:66037068-66037087 | Msa0465610:intron | 25.0% |
| ! | TATCTTCTTGAATTTCTGAA+TGG | - | chr3_3:66037149-66037168 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+AGG | + | chr3_3:66037152-66037171 | Msa0465610:intron | 25.0% |
| ! | GAAATTCAAGAAGATAATGA+GGG | + | chr3_3:66037153-66037172 | Msa0465610:intron | 25.0% |
| ! | TACAAATTTGCACAAATAGT+CGG | - | chr3_3:66037317-66037336 | None:intergenic | 25.0% |
| ! | CTAATCCAAAGATTTGAATA+AGG | - | chr3_3:66037423-66037442 | None:intergenic | 25.0% |
| ! | AAATCAAACTTACATCAGAT+TGG | - | chr3_3:66037455-66037474 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTTTTTTTCTGC+AGG | + | chr3_3:66037465-66037484 | Msa0465610:intron | 25.0% |
| ! | TAGAAACATTAAAAGACACT+AGG | - | chr3_3:66037737-66037756 | None:intergenic | 25.0% |
| ! | TCATTAAATTTAACCCTTGA+TGG | + | chr3_3:66038054-66038073 | Msa0465610:intron | 25.0% |
| ! | TAAAACTAAAAGAGTCTACA+CGG | - | chr3_3:66038097-66038116 | None:intergenic | 25.0% |
| ! | GTTGGTTGTTGAAAATAATA+TGG | - | chr3_3:66038385-66038404 | None:intergenic | 25.0% |
| ! | CTTTCAAATTGAAGTGAAAT+GGG | - | chr3_3:66038407-66038426 | None:intergenic | 25.0% |
| ! | CATTTCACTTCAATTTGAAA+GGG | + | chr3_3:66038406-66038425 | Msa0465610:intron | 25.0% |
| ! | AATTCAAATTGTGTTGAATC+TGG | - | chr3_3:66038529-66038548 | None:intergenic | 25.0% |
| ! | TAGATATTAAGGTAATTGTG+GGG | - | chr3_3:66038928-66038947 | None:intergenic | 25.0% |
| ! | CATAGATATTAAGGTAATTG+TGG | - | chr3_3:66038930-66038949 | None:intergenic | 25.0% |
| ! | ATTGGTGAATGAATATAAGT+TGG | - | chr3_3:66039457-66039476 | None:intergenic | 25.0% |
| ! | TTGACATGAAATAACAAGAA+TGG | - | chr3_3:66039497-66039516 | None:intergenic | 25.0% |
| !!! | GAATTTTTTTTTGCCCTTAT+TGG | + | chr3_3:66039547-66039566 | Msa0465610:intron | 25.0% |
| !!! | ATTTTTTTTTGCCCTTATTG+GGG | + | chr3_3:66039549-66039568 | Msa0465610:intron | 25.0% |
| !! | TCTTCAATCTTTTCTAATAC+TGG | + | chr3_3:66039613-66039632 | Msa0465610:intron | 25.0% |
| ! | TTTCTCAAGAAAGATTCAAT+TGG | + | chr3_3:66039673-66039692 | Msa0465610:intron | 25.0% |
| !!! | TATTCTGTCTTTGTTTTTTC+CGG | + | chr3_3:66039997-66040016 | Msa0465610:intron | 25.0% |
| !!! | CAATTACCAAAAGTTTTTTC+AGG | - | chr3_3:66040213-66040232 | None:intergenic | 25.0% |
| ! | TTATATTCTATTCAATTGCC+AGG | + | chr3_3:66040342-66040361 | Msa0465610:intron | 25.0% |
| ! | TATATTCTATTCAATTGCCA+GGG | + | chr3_3:66040343-66040362 | Msa0465610:intron | 25.0% |
| ! | AATGTTGGCAATTAGTAAAA+GGG | - | chr3_3:66041105-66041124 | None:intergenic | 25.0% |
| ! | AAATGTTGGCAATTAGTAAA+AGG | - | chr3_3:66041106-66041125 | None:intergenic | 25.0% |
| !!! | ATTACATGCTGCTTATTTTA+AGG | - | chr3_3:66041277-66041296 | None:intergenic | 25.0% |
| ! | TGCAAATGATGAATGAAAAT+GGG | - | chr3_3:66041303-66041322 | None:intergenic | 25.0% |
| !!! | ACTTTGTTCTAAAACTGTTA+AGG | - | chr3_3:66041361-66041380 | None:intergenic | 25.0% |
| ! | ATCAGAATTTACAGAAACAA+GGG | - | chr3_3:66042074-66042093 | None:intergenic | 25.0% |
| ! | ATATTTGGTAGTTGATCCTT+TGG | - | chr3_3:66035515-66035534 | None:intergenic | 30.0% |
| AAAAAAAGAAACTAACGCCA+TGG | - | chr3_3:66035563-66035582 | None:intergenic | 30.0% | |
| TTATGATGTAAGTGTGTGTT+TGG | + | chr3_3:66035891-66035910 | Msa0465610:intron | 30.0% | |
| AACCAAAAGTGAGTTATGTT+TGG | + | chr3_3:66035963-66035982 | Msa0465610:intron | 30.0% | |
| ! | ATCCAAACATAACTCACTTT+TGG | - | chr3_3:66035968-66035987 | None:intergenic | 30.0% |
| TCAAGTAGAATCATATTTGG+AGG | + | chr3_3:66036065-66036084 | Msa0465610:intron | 30.0% | |
| !! | TTACACCTCTAGAATCAATT+TGG | + | chr3_3:66036134-66036153 | Msa0465610:intron | 30.0% |
| GTGTTATGTAACATCACTAA+GGG | + | chr3_3:66036266-66036285 | Msa0465610:intron | 30.0% | |
| ! | GTAAAGGAATTTTGCGTAAT+TGG | + | chr3_3:66036322-66036341 | Msa0465610:intron | 30.0% |
| GTGAATCAATACTAAGGAAA+AGG | - | chr3_3:66036427-66036446 | None:intergenic | 30.0% | |
| !! | TCCTTAGTATTGATTCACTT+TGG | + | chr3_3:66036429-66036448 | Msa0465610:intron | 30.0% |
| ACCAAAGTGAATCAATACTA+AGG | - | chr3_3:66036433-66036452 | None:intergenic | 30.0% | |
| ATGTTGAAATCCAAGAAGTA+TGG | - | chr3_3:66036521-66036540 | None:intergenic | 30.0% | |
| ! | CAACATTTTCTTGTAATGCT+CGG | + | chr3_3:66036535-66036554 | Msa0465610:CDS | 30.0% |
| !! | AGCAAGTTTTGATATGGAAA+TGG | + | chr3_3:66036620-66036639 | Msa0465610:intron | 30.0% |
| ! | ATATTCTATTTGCTGCTTGT+AGG | + | chr3_3:66036681-66036700 | Msa0465610:intron | 30.0% |
| AAGCAGAGTTTCAATTACTT+TGG | - | chr3_3:66036716-66036735 | None:intergenic | 30.0% | |
| AGAATAATTGAGATTGTCGT+TGG | - | chr3_3:66036823-66036842 | None:intergenic | 30.0% | |
| ! | GTATAGTTAGTTCTTCTGAT+AGG | - | chr3_3:66036885-66036904 | None:intergenic | 30.0% |
| !! | ACAAACTTAAGGTCTTATTG+TGG | - | chr3_3:66037057-66037076 | None:intergenic | 30.0% |
| TCAACTCTTCAAATAGTACT+AGG | + | chr3_3:66037202-66037221 | Msa0465610:CDS | 30.0% | |
| TTACATCAGATTGGAACATT+TGG | - | chr3_3:66037446-66037465 | None:intergenic | 30.0% | |
| ATCCATGAACTAAAATCACA+AGG | - | chr3_3:66037767-66037786 | None:intergenic | 30.0% | |
| TATTCACAATTGCAATTGTG+TGG | + | chr3_3:66037909-66037928 | Msa0465610:CDS | 30.0% | |
| AATAGACAAAATGCCATCAA+GGG | - | chr3_3:66038070-66038089 | None:intergenic | 30.0% | |
| ACAACTACTGGATATTTGAA+GGG | - | chr3_3:66038331-66038350 | None:intergenic | 30.0% | |
| AACAACTACTGGATATTTGA+AGG | - | chr3_3:66038332-66038351 | None:intergenic | 30.0% | |
| CCTTTCAAATTGAAGTGAAA+TGG | - | chr3_3:66038408-66038427 | None:intergenic | 30.0% | |
| CCATTTCACTTCAATTTGAA+AGG | + | chr3_3:66038405-66038424 | Msa0465610:intron | 30.0% | |
| ACTTCAATTTGAAAGGGTAA+AGG | + | chr3_3:66038412-66038431 | Msa0465610:intron | 30.0% | |
| !!! | GTGTTGTGTTGTTGTTTTTA+TGG | + | chr3_3:66038550-66038569 | Msa0465610:intron | 30.0% |
| TTGTACTTGAGAAGAAAATG+AGG | + | chr3_3:66038577-66038596 | Msa0465610:intron | 30.0% | |
| GAATCACATTCAAGCTTATA+GGG | - | chr3_3:66038866-66038885 | None:intergenic | 30.0% | |
| GTGATTCGAAAATAACTCTT+CGG | + | chr3_3:66038879-66038898 | Msa0465610:intron | 30.0% | |
| AGATATTAAGGTAATTGTGG+GGG | - | chr3_3:66038927-66038946 | None:intergenic | 30.0% | |
| ATTATACTTCTTGTGGATGA+AGG | - | chr3_3:66039166-66039185 | None:intergenic | 30.0% | |
| !! | TTTTAATTGGGTCCTTATCA+TGG | - | chr3_3:66039372-66039391 | None:intergenic | 30.0% |
| GATAAAAATCTCCCCAATAA+GGG | - | chr3_3:66039563-66039582 | None:intergenic | 30.0% | |
| TGATAAAAATCTCCCCAATA+AGG | - | chr3_3:66039564-66039583 | None:intergenic | 30.0% | |
| TCAAGAAAACCAATATCTCA+AGG | - | chr3_3:66039701-66039720 | None:intergenic | 30.0% | |
| !!! | TGAGATATTGGTTTTCTTGA+TGG | + | chr3_3:66039701-66039720 | Msa0465610:intron | 30.0% |
| !!! | GAGATATTGGTTTTCTTGAT+GGG | + | chr3_3:66039702-66039721 | Msa0465610:intron | 30.0% |
| !!! | CTCTTGTATTTTGAGTTTGT+AGG | + | chr3_3:66039777-66039796 | Msa0465610:intron | 30.0% |
| TAGTTTCATTGAAATTCAGC+TGG | - | chr3_3:66040103-66040122 | None:intergenic | 30.0% | |
| TTCATGATACTAAGCTACTA+TGG | - | chr3_3:66040151-66040170 | None:intergenic | 30.0% | |
| ATATTCTATTCAATTGCCAG+GGG | + | chr3_3:66040344-66040363 | Msa0465610:intron | 30.0% | |
| CTGTTACATAGTTGCTAATT+TGG | + | chr3_3:66040491-66040510 | Msa0465610:intron | 30.0% | |
| ! | CATCTGATTTATGCTTGTTA+GGG | + | chr3_3:66040763-66040782 | Msa0465610:intron | 30.0% |
| ! | ATCTGATTTATGCTTGTTAG+GGG | + | chr3_3:66040764-66040783 | Msa0465610:intron | 30.0% |
| ATTCTTCTATCTGGATTGTT+TGG | + | chr3_3:66040793-66040812 | Msa0465610:CDS | 30.0% | |
| ATGTTGGCAATTAGTAAAAG+GGG | - | chr3_3:66041104-66041123 | None:intergenic | 30.0% | |
| TATCACTGTGTAGGAAAATT+TGG | + | chr3_3:66041127-66041146 | Msa0465610:intron | 30.0% | |
| TACCAACATAAGCAAAGAAT+AGG | - | chr3_3:66041201-66041220 | None:intergenic | 30.0% | |
| CTGCAAATGATGAATGAAAA+TGG | - | chr3_3:66041304-66041323 | None:intergenic | 30.0% | |
| ! | CATTTTCATTCATCATTTGC+AGG | + | chr3_3:66041302-66041321 | Msa0465610:intron | 30.0% |
| ATTAGGCTTCTCTATATTCT+TGG | + | chr3_3:66041385-66041404 | Msa0465610:CDS | 30.0% | |
| TTAGGCTTCTCTATATTCTT+GGG | + | chr3_3:66041386-66041405 | Msa0465610:CDS | 30.0% | |
| AATGAGTATACAGCAATCAA+TGG | + | chr3_3:66041431-66041450 | Msa0465610:CDS | 30.0% | |
| TATACAGCAATCAATGGTTA+TGG | + | chr3_3:66041437-66041456 | Msa0465610:CDS | 30.0% | |
| ATACAGCAATCAATGGTTAT+GGG | + | chr3_3:66041438-66041457 | Msa0465610:CDS | 30.0% | |
| CAATGCATAAGAATTGAACT+AGG | + | chr3_3:66041619-66041638 | Msa0465610:intron | 30.0% | |
| ! | TTGAACTAGGATTTGTTCTT+TGG | + | chr3_3:66041632-66041651 | Msa0465610:intron | 30.0% |
| !! | CAAATGCTTTTGATTGGAAT+GGG | - | chr3_3:66041717-66041736 | None:intergenic | 30.0% |
| !! | ACAAATGCTTTTGATTGGAA+TGG | - | chr3_3:66041718-66041737 | None:intergenic | 30.0% |
| !! | TCTTATGTAAAGTGTTGTCT+AGG | - | chr3_3:66041762-66041781 | None:intergenic | 30.0% |
| TAGACAACACTTTACATAAG+AGG | + | chr3_3:66041761-66041780 | Msa0465610:CDS | 30.0% | |
| AGACAACACTTTACATAAGA+GGG | + | chr3_3:66041762-66041781 | Msa0465610:CDS | 30.0% | |
| !! | CATCGGTTTAATTAATTGTG+CGG | + | chr3_3:66041902-66041921 | Msa0465610:exon | 30.0% |
| GATCAGAATTTACAGAAACA+AGG | - | chr3_3:66042075-66042094 | None:intergenic | 30.0% | |
| GTAAATTCTGATCAAGAAAG+TGG | + | chr3_3:66042082-66042101 | Msa0465610:three_prime_UTR | 30.0% | |
| ACGTGACAAAAATCAAATGA+AGG | - | chr3_3:66042138-66042157 | None:intergenic | 30.0% | |
| TTAGATTAAGAAGCTATGGC+AGG | + | chr3_3:66035443-66035462 | Msa0465610:exon | 35.0% | |
| ! | GGTGTTATGTAACATCACTA+AGG | + | chr3_3:66036265-66036284 | Msa0465610:intron | 35.0% |
| TCAATACTAAGGAAAAGGAG+AGG | - | chr3_3:66036422-66036441 | None:intergenic | 35.0% | |
| !! | AGGACTAGCAAGTTTTGATA+TGG | + | chr3_3:66036614-66036633 | Msa0465610:intron | 35.0% |
| TGTTGCTGGTATTAACACAT+TGG | + | chr3_3:66036738-66036757 | Msa0465610:CDS | 35.0% | |
| ACAATCTCAATTATTCTCGC+TGG | + | chr3_3:66036826-66036845 | Msa0465610:CDS | 35.0% | |
| ! | GATCTGGTTCATTACTGAAT+CGG | - | chr3_3:66036852-66036871 | None:intergenic | 35.0% |
| ! | AGTGTGTGATTGTTTGCTTT+TGG | - | chr3_3:66037015-66037034 | None:intergenic | 35.0% |
| GCTATTTGATTGGAACTGTT+AGG | + | chr3_3:66037078-66037097 | Msa0465610:intron | 35.0% | |
| ! | CAAATAGTACTAGGCTTTAG+TGG | + | chr3_3:66037211-66037230 | Msa0465610:CDS | 35.0% |
| AATTTGCACAAATAGTCGGA+AGG | - | chr3_3:66037313-66037332 | None:intergenic | 35.0% | |
| AAACCAACAAGAGAAACCAA+TGG | - | chr3_3:66037515-66037534 | None:intergenic | 35.0% | |
| !!! | TTGGTTTCTCTTGTTGGTTT+TGG | + | chr3_3:66037515-66037534 | Msa0465610:CDS | 35.0% |
| !!! | TGGTTTCTCTTGTTGGTTTT+GGG | + | chr3_3:66037516-66037535 | Msa0465610:CDS | 35.0% |
| ! | TTGTACGAATTAGGTTTTCC+TGG | + | chr3_3:66037539-66037558 | Msa0465610:CDS | 35.0% |
| ! | TGTACGAATTAGGTTTTCCT+GGG | + | chr3_3:66037540-66037559 | Msa0465610:CDS | 35.0% |
| GTTGCTAAATGTGTAGAGAT+TGG | + | chr3_3:66037649-66037668 | Msa0465610:CDS | 35.0% | |
| AATACCAGCAATATAAGCTC+TGG | - | chr3_3:66037679-66037698 | None:intergenic | 35.0% | |
| ATTGCTGGTATTTGTTTCAC+AGG | + | chr3_3:66037687-66037706 | Msa0465610:CDS | 35.0% | |
| GATATATGCTGTTCTACTCA+CGG | + | chr3_3:66037931-66037950 | Msa0465610:CDS | 35.0% | |
| TGAAATCACACAACTAACCA+AGG | - | chr3_3:66038037-66038056 | None:intergenic | 35.0% | |
| CAATAGACAAAATGCCATCA+AGG | - | chr3_3:66038071-66038090 | None:intergenic | 35.0% | |
| CGAGATCAAATATACAAGCA+TGG | - | chr3_3:66038120-66038139 | None:intergenic | 35.0% | |
| ! | TGCGTAAGAAATAGTGTTGA+TGG | - | chr3_3:66038270-66038289 | None:intergenic | 35.0% |
| GTTTAGTGAAGAACAACTAC+TGG | - | chr3_3:66038343-66038362 | None:intergenic | 35.0% | |
| CAAATTGAAGTGAAATGGGT+TGG | - | chr3_3:66038403-66038422 | None:intergenic | 35.0% | |
| TTCAAGAAACATCCAGTGAA+AGG | + | chr3_3:66038458-66038477 | Msa0465610:intron | 35.0% | |
| AAACATCCAGTGAAAGGTAA+AGG | + | chr3_3:66038464-66038483 | Msa0465610:intron | 35.0% | |
| TTACGTGAGTTAACTCACAT+AGG | - | chr3_3:66038654-66038673 | None:intergenic | 35.0% | |
| TAGCGCAGGTGTAAAAAAAA+GGG | - | chr3_3:66038754-66038773 | None:intergenic | 35.0% | |
| !!! | GTATTTTTGGAATGGTTGCA+GGG | + | chr3_3:66038790-66038809 | Msa0465610:intron | 35.0% |
| CGAATCACATTCAAGCTTAT+AGG | - | chr3_3:66038867-66038886 | None:intergenic | 35.0% | |
| ACCTTAATATCTATGAAGCC+CGG | + | chr3_3:66038935-66038954 | Msa0465610:intron | 35.0% | |
| ! | GGAGATTTTTATCACTGAAG+TGG | + | chr3_3:66039570-66039589 | Msa0465610:intron | 35.0% |
| TCTATTGTGTTTGTGCTCTA+AGG | - | chr3_3:66039651-66039670 | None:intergenic | 35.0% | |
| CAATTGGATCCTTGAGATAT+TGG | + | chr3_3:66039689-66039708 | Msa0465610:intron | 35.0% | |
| AGTTCCATATCCCTTTCAAT+GGG | + | chr3_3:66039805-66039824 | Msa0465610:CDS | 35.0% | |
| !!! | TCTTTGTTTTTTCCGGAACT+GGG | + | chr3_3:66040004-66040023 | Msa0465610:intron | 35.0% |
| ! | TTTTATCAGTGCATTGAAGC+TGG | + | chr3_3:66040027-66040046 | Msa0465610:intron | 35.0% |
| !! | ATGGTTGATTCTTTTCCTCA+AGG | + | chr3_3:66040250-66040269 | Msa0465610:intron | 35.0% |
| !! | TGGTTGATTCTTTTCCTCAA+GGG | + | chr3_3:66040251-66040270 | Msa0465610:intron | 35.0% |
| GAGCTTTCATTGCTGTATAT+AGG | + | chr3_3:66040546-66040565 | Msa0465610:CDS | 35.0% | |
| TAAGAATAGAAGGTGGCAAT+GGG | - | chr3_3:66040586-66040605 | None:intergenic | 35.0% | |
| AAGCATAAATCAGATGCATG+AGG | - | chr3_3:66040759-66040778 | None:intergenic | 35.0% | |
| GCATCTGATTTATGCTTGTT+AGG | + | chr3_3:66040762-66040781 | Msa0465610:intron | 35.0% | |
| ! | TCTGATTTATGCTTGTTAGG+GGG | + | chr3_3:66040765-66040784 | Msa0465610:intron | 35.0% |
| ! | GGATTGTTTGGAACAATTAG+CGG | + | chr3_3:66040805-66040824 | Msa0465610:CDS | 35.0% |
| TAAAAGGGGAGAAATGTACT+CGG | - | chr3_3:66041090-66041109 | None:intergenic | 35.0% | |
| CTACACAGTGATAGAAATGT+TGG | - | chr3_3:66041120-66041139 | None:intergenic | 35.0% | |
| CAACATTTCTATCACTGTGT+AGG | + | chr3_3:66041118-66041137 | Msa0465610:intron | 35.0% | |
| TGCCTATTCTTTGCTTATGT+TGG | + | chr3_3:66041196-66041215 | Msa0465610:CDS | 35.0% | |
| !!! | GCTGCTTATTTTAAGGATCA+TGG | - | chr3_3:66041270-66041289 | None:intergenic | 35.0% |
| !! | GTATACTCATTGAAGTACTG+TGG | - | chr3_3:66041422-66041441 | None:intergenic | 35.0% |
| TACGTGACAGTTCAATGATA+TGG | + | chr3_3:66041684-66041703 | Msa0465610:intron | 35.0% | |
| !! | CCAATCAAAAGCATTTGTTG+CGG | + | chr3_3:66041720-66041739 | Msa0465610:CDS | 35.0% |
| !! | CAATCAAAAGCATTTGTTGC+GGG | + | chr3_3:66041721-66041740 | Msa0465610:CDS | 35.0% |
| GAGGGATTCATCTATTAGAA+AGG | + | chr3_3:66041780-66041799 | Msa0465610:CDS | 35.0% | |
| TCATCTATTAGAAAGGACAG+AGG | + | chr3_3:66041787-66041806 | Msa0465610:CDS | 35.0% | |
| GACAAGTACAAGTCATTCAA+GGG | + | chr3_3:66041823-66041842 | Msa0465610:CDS | 35.0% | |
| CGCACAATTAATTAAACCGA+TGG | - | chr3_3:66041904-66041923 | None:intergenic | 35.0% | |
| ACAAGAGCGATAAGATAAAG+TGG | + | chr3_3:66041926-66041945 | Msa0465610:three_prime_UTR | 35.0% | |
| CTGATATTAGAACTAGACTC+TGG | - | chr3_3:66041963-66041982 | None:intergenic | 35.0% | |
| ! | TGTGGTTCATCTGATTTTGC+TGG | - | chr3_3:66035482-66035501 | None:intergenic | 40.0% |
| ! | TTTGGTAGTTGATCCTTTGG+TGG | - | chr3_3:66035512-66035531 | None:intergenic | 40.0% |
| AAAAGAAACTAACGCCATGG+AGG | - | chr3_3:66035560-66035579 | None:intergenic | 40.0% | |
| ! | GGGATCCAAATTGATTCTAG+AGG | - | chr3_3:66036142-66036161 | None:intergenic | 40.0% |
| ! | TTCTATTTGCTGCTTGTAGG+CGG | + | chr3_3:66036684-66036703 | Msa0465610:intron | 40.0% |
| !!! | GAAACTCTGCTTTTTGTTGC+TGG | + | chr3_3:66036724-66036743 | Msa0465610:CDS | 40.0% |
| ACATTGGTGCAAACACTCTT+TGG | + | chr3_3:66036754-66036773 | Msa0465610:CDS | 40.0% | |
| TCACGATTACCTGCAGTAAT+TGG | + | chr3_3:66036778-66036797 | Msa0465610:CDS | 40.0% | |
| GATTACCTGCAGTAATTGGA+GGG | + | chr3_3:66036782-66036801 | Msa0465610:CDS | 40.0% | |
| TGAGATTGTCGTTGGAACAT+AGG | - | chr3_3:66036815-66036834 | None:intergenic | 40.0% | |
| TAATGAACCAGATCCGATTG+AGG | + | chr3_3:66036858-66036877 | Msa0465610:CDS | 40.0% | |
| TCTTCTGATAGGACCTCAAT+CGG | - | chr3_3:66036874-66036893 | None:intergenic | 40.0% | |
| GGTCTCACATTCTTACTAAG+TGG | + | chr3_3:66037258-66037277 | Msa0465610:intron | 40.0% | |
| CTCACATTCTTACTAAGTGG+CGG | + | chr3_3:66037261-66037280 | Msa0465610:intron | 40.0% | |
| !! | GTTCCATTGGTTTCTCTTGT+TGG | + | chr3_3:66037509-66037528 | Msa0465610:CDS | 40.0% |
| !!! | GGTTTTGGGTTGTACGAATT+AGG | + | chr3_3:66037530-66037549 | Msa0465610:CDS | 40.0% |
| ! | GTACGAATTAGGTTTTCCTG+GGG | + | chr3_3:66037541-66037560 | Msa0465610:CDS | 40.0% |
| AGCCTTCGACTACATGTTTA+CGG | + | chr3_3:66037566-66037585 | Msa0465610:intron | 40.0% | |
| TCAACATCGATGCTTGTGTT+GGG | + | chr3_3:66037621-66037640 | Msa0465610:intron | 40.0% | |
| !!! | CGCCTTGTGATTTTAGTTCA+TGG | + | chr3_3:66037762-66037781 | Msa0465610:intron | 40.0% |
| CACTGGATGTTTCTTGAATC+TGG | - | chr3_3:66038456-66038475 | None:intergenic | 40.0% | |
| GAAAATGAGGAACAGAGAAG+AGG | + | chr3_3:66038590-66038609 | Msa0465610:intron | 40.0% | |
| GAGAAGAGGAATAGAGAAGA+AGG | + | chr3_3:66038604-66038623 | Msa0465610:intron | 40.0% | |
| CTAGCGCAGGTGTAAAAAAA+AGG | - | chr3_3:66038755-66038774 | None:intergenic | 40.0% | |
| !!! | AACAAGCGCAGAGGTATTTT+TGG | + | chr3_3:66038777-66038796 | Msa0465610:intron | 40.0% |
| !!! | GGTATTTTTGGAATGGTTGC+AGG | + | chr3_3:66038789-66038808 | Msa0465610:intron | 40.0% |
| TATTAAGGTAATTGTGGGGG+TGG | - | chr3_3:66038924-66038943 | None:intergenic | 40.0% | |
| TCCGGGCTTCATAGATATTA+AGG | - | chr3_3:66038939-66038958 | None:intergenic | 40.0% | |
| ATATCTATGAAGCCCGGATA+CGG | + | chr3_3:66038941-66038960 | Msa0465610:intron | 40.0% | |
| TTGATGGGAATCTACGTTCT+AGG | + | chr3_3:66039717-66039736 | Msa0465610:intron | 40.0% | |
| GAGTTCCATATCCCTTTCAA+TGG | + | chr3_3:66039804-66039823 | Msa0465610:CDS | 40.0% | |
| GTTCCATATCCCTTTCAATG+GGG | + | chr3_3:66039806-66039825 | Msa0465610:CDS | 40.0% | |
| AACGAAAGATGCCATCATCA+TGG | - | chr3_3:66039864-66039883 | None:intergenic | 40.0% | |
| ATCTTTCGTTGCTCTTGTAG+AGG | + | chr3_3:66039874-66039893 | Msa0465610:CDS | 40.0% | |
| !!! | GTCTTTGTTTTTTCCGGAAC+TGG | + | chr3_3:66040003-66040022 | Msa0465610:intron | 40.0% |
| TGAAATTCAGCTGGCACAAA+AGG | - | chr3_3:66040094-66040113 | None:intergenic | 40.0% | |
| TGTTGGGCGTTAGTCATAAA+TGG | + | chr3_3:66040231-66040250 | Msa0465610:intron | 40.0% | |
| ! | TCTTTTTGTACACAGTCCAC+TGG | + | chr3_3:66040524-66040543 | Msa0465610:intron | 40.0% |
| AAGAATAGAAGGTGGCAATG+GGG | - | chr3_3:66040585-66040604 | None:intergenic | 40.0% | |
| CTAAGAATAGAAGGTGGCAA+TGG | - | chr3_3:66040587-66040606 | None:intergenic | 40.0% | |
| TGCCACCTTCTATTCTTAGT+CGG | + | chr3_3:66040588-66040607 | Msa0465610:CDS | 40.0% | |
| ATACCCCGACTAAGAATAGA+AGG | - | chr3_3:66040596-66040615 | None:intergenic | 40.0% | |
| TCTATTCTTAGTCGGGGTAT+TGG | + | chr3_3:66040596-66040615 | Msa0465610:CDS | 40.0% | |
| ! | ATTTATGCTTGTTAGGGGGT+TGG | + | chr3_3:66040769-66040788 | Msa0465610:intron | 40.0% |
| GTTTCAGTCTTACACAGACA+CGG | - | chr3_3:66040836-66040855 | None:intergenic | 40.0% | |
| !!! | CAGAGAAAATGCTGGTCTTT+TGG | + | chr3_3:66040939-66040958 | Msa0465610:intron | 40.0% |
| TACAATGCAGCAATGATTGC+AGG | - | chr3_3:66041175-66041194 | None:intergenic | 40.0% | |
| ! | CCGCAACAAATGCTTTTGAT+TGG | - | chr3_3:66041723-66041742 | None:intergenic | 40.0% |
| GGACAAGTACAAGTCATTCA+AGG | + | chr3_3:66041822-66041841 | Msa0465610:CDS | 40.0% | |
| TAGAGTGGAGACTACTCATA+TGG | - | chr3_3:66042014-66042033 | None:intergenic | 40.0% | |
| GATTAAGAAGCTATGGCAGG+AGG | + | chr3_3:66035446-66035465 | Msa0465610:exon | 45.0% | |
| ! | AGTTGATCCTTTGGTGGATG+TGG | - | chr3_3:66035506-66035525 | None:intergenic | 45.0% |
| ACTAAGGAAAAGGAGAGGCT+GGG | - | chr3_3:66036417-66036436 | None:intergenic | 45.0% | |
| TACTAAGGAAAAGGAGAGGC+TGG | - | chr3_3:66036418-66036437 | None:intergenic | 45.0% | |
| ATCTGAGGAACAAGAGCAGT+GGG | - | chr3_3:66036577-66036596 | None:intergenic | 45.0% | |
| ACTGCTCTTGTTCCTCAGAT+GGG | + | chr3_3:66036577-66036596 | Msa0465610:CDS | 45.0% | |
| GATGGGAGGTGGAAATGTAA+AGG | + | chr3_3:66036594-66036613 | Msa0465610:intron | 45.0% | |
| CGATTACCTGCAGTAATTGG+AGG | + | chr3_3:66036781-66036800 | Msa0465610:CDS | 45.0% | |
| TAAGACCCTCCAATTACTGC+AGG | - | chr3_3:66036790-66036809 | None:intergenic | 45.0% | |
| AAGATAATGAGGGCAGTCCA+GGG | + | chr3_3:66037163-66037182 | Msa0465610:CDS | 45.0% | |
| !! | AAGCAACAATAAGAGCACCC+TGG | - | chr3_3:66037183-66037202 | None:intergenic | 45.0% |
| ! | TACTAGGCTTTAGTGGCCTT+TGG | + | chr3_3:66037218-66037237 | Msa0465610:CDS | 45.0% |
| ACCTTGCAACATTACGCCAA+AGG | - | chr3_3:66037237-66037256 | None:intergenic | 45.0% | |
| TTGGCGTAATGTTGCAAGGT+TGG | + | chr3_3:66037237-66037256 | Msa0465610:intron | 45.0% | |
| TCCACTTTCAGCTGTTCCAT+TGG | + | chr3_3:66037496-66037515 | Msa0465610:CDS | 45.0% | |
| ACCAATGGAACAGCTGAAAG+TGG | - | chr3_3:66037500-66037519 | None:intergenic | 45.0% | |
| CACCGTAAACATGTAGTCGA+AGG | - | chr3_3:66037571-66037590 | None:intergenic | 45.0% | |
| CTTCGACTACATGTTTACGG+TGG | + | chr3_3:66037569-66037588 | Msa0465610:intron | 45.0% | |
| CTCAACATCGATGCTTGTGT+TGG | + | chr3_3:66037620-66037639 | Msa0465610:intron | 45.0% | |
| ACTGCCAGAGCTTATATTGC+TGG | + | chr3_3:66037672-66037691 | Msa0465610:CDS | 45.0% | |
| TGTGCCACATGTGTTGCATT+CGG | + | chr3_3:66037856-66037875 | Msa0465610:CDS | 45.0% | |
| TTTCCCGAATGCAACACATG+TGG | - | chr3_3:66037863-66037882 | None:intergenic | 45.0% | |
| TATGCTGTTCTACTCACGGT+TGG | + | chr3_3:66037935-66037954 | Msa0465610:CDS | 45.0% | |
| TTTCGGTGGAGAACCGTTAT+AGG | - | chr3_3:66037966-66037985 | None:intergenic | 45.0% | |
| GACTTATAGATGCTGCTCCT+TGG | + | chr3_3:66038017-66038036 | Msa0465610:CDS | 45.0% | |
| GTGCAACCTTTACCTTTCAC+TGG | - | chr3_3:66038473-66038492 | None:intergenic | 45.0% | |
| GGTAAAGGTTGCACTTGAGA+AGG | + | chr3_3:66038479-66038498 | Msa0465610:intron | 45.0% | |
| !!! | GCGCAGAGGTATTTTTGGAA+TGG | + | chr3_3:66038782-66038801 | Msa0465610:intron | 45.0% |
| ATTGGGTCCTTATCATGGCA+GGG | - | chr3_3:66039367-66039386 | None:intergenic | 45.0% | |
| AATTGGGTCCTTATCATGGC+AGG | - | chr3_3:66039368-66039387 | None:intergenic | 45.0% | |
| ! | CGAAGCATTTGCCATGATGA+TGG | + | chr3_3:66039850-66039869 | Msa0465610:CDS | 45.0% |
| ! | GCACTGATAAAACCCAGTTC+CGG | - | chr3_3:66040019-66040038 | None:intergenic | 45.0% |
| !! | GACTGTTTCTATCTCCCTTG+AGG | - | chr3_3:66040268-66040287 | None:intergenic | 45.0% |
| TTCTATTCAATTGCCAGGGG+CGG | + | chr3_3:66040347-66040366 | Msa0465610:intron | 45.0% | |
| TACAGCAATGAAAGCTCCAG+TGG | - | chr3_3:66040543-66040562 | None:intergenic | 45.0% | |
| GCCACCTTCTATTCTTAGTC+GGG | + | chr3_3:66040589-66040608 | Msa0465610:CDS | 45.0% | |
| CCACCTTCTATTCTTAGTCG+GGG | + | chr3_3:66040590-66040609 | Msa0465610:CDS | 45.0% | |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | + | chr3_3:66040600-66040619 | Msa0465610:CDS | 45.0% |
| TTTCCCTGCAGAGAAAATGC+TGG | + | chr3_3:66040931-66040950 | Msa0465610:intron | 45.0% | |
| ! | AGACCAGCATTTTCTCTGCA+GGG | - | chr3_3:66040937-66040956 | None:intergenic | 45.0% |
| ! | AAGACCAGCATTTTCTCTGC+AGG | - | chr3_3:66040938-66040957 | None:intergenic | 45.0% |
| AGAGTTGTGCAGATATCTGC+TGG | + | chr3_3:66040985-66041004 | Msa0465610:CDS | 45.0% | |
| AATGATTGCAGGTGGGATAG+AGG | - | chr3_3:66041164-66041183 | None:intergenic | 45.0% | |
| ATGCAGCAATGATTGCAGGT+GGG | - | chr3_3:66041171-66041190 | None:intergenic | 45.0% | |
| AATGCAGCAATGATTGCAGG+TGG | - | chr3_3:66041172-66041191 | None:intergenic | 45.0% | |
| CATTCATCATTTGCAGGAGC+TGG | + | chr3_3:66041308-66041327 | Msa0465610:intron | 45.0% | |
| GAAAGGACAGAGGCAAACAT+TGG | + | chr3_3:66041797-66041816 | Msa0465610:CDS | 45.0% | |
| AATGCATTGCTTGGTCATGG+GGG | - | chr3_3:66042176-66042195 | None:intergenic | 45.0% | |
| !! | AATTAAAAAATATATTATTC+AGG | + | chr3_3:66036227-66036246 | Msa0465610:intron | 5.0% |
| !!! | TTTTAAATAAGTTTTTAATT+GGG | - | chr3_3:66039384-66039403 | None:intergenic | 5.0% |
| !!! | TTTTTAAATAAGTTTTTAAT+TGG | - | chr3_3:66039385-66039404 | None:intergenic | 5.0% |
| TAAGAAGCTATGGCAGGAGG+AGG | + | chr3_3:66035449-66035468 | Msa0465610:exon | 50.0% | |
| ACCACAACCACATCCACCAA+AGG | + | chr3_3:66035496-66035515 | Msa0465610:CDS | 50.0% | |
| ! | TCCTTTGGTGGATGTGGTTG+TGG | - | chr3_3:66035500-66035519 | None:intergenic | 50.0% |
| GCATTACTAGTCCTCCTCCA+TGG | + | chr3_3:66035543-66035562 | Msa0465610:CDS | 50.0% | |
| AGAAACTAACGCCATGGAGG+AGG | - | chr3_3:66035557-66035576 | None:intergenic | 50.0% | |
| !! | GGGACATTTTGATGCAGCTG+AGG | + | chr3_3:66036495-66036514 | Msa0465610:intron | 50.0% |
| CATCTGAGGAACAAGAGCAG+TGG | - | chr3_3:66036578-66036597 | None:intergenic | 50.0% | |
| CACTGCTCTTGTTCCTCAGA+TGG | + | chr3_3:66036576-66036595 | Msa0465610:CDS | 50.0% | |
| ACATTTCCACCTCCCATCTG+AGG | - | chr3_3:66036592-66036611 | None:intergenic | 50.0% | |
| GATAGGACCTCAATCGGATC+TGG | - | chr3_3:66036868-66036887 | None:intergenic | 50.0% | |
| GAAGATAATGAGGGCAGTCC+AGG | + | chr3_3:66037162-66037181 | Msa0465610:CDS | 50.0% | |
| GCCTTTGGCGTAATGTTGCA+AGG | + | chr3_3:66037233-66037252 | Msa0465610:CDS | 50.0% | |
| TCGATGCTTGTGTTGGGTGT+AGG | + | chr3_3:66037627-66037646 | Msa0465610:intron | 50.0% | |
| GTGCCACATGTGTTGCATTC+GGG | + | chr3_3:66037857-66037876 | Msa0465610:CDS | 50.0% | |
| CTGTTCTACTCACGGTTGGA+GGG | + | chr3_3:66037939-66037958 | Msa0465610:CDS | 50.0% | |
| TGTTCTACTCACGGTTGGAG+GGG | + | chr3_3:66037940-66037959 | Msa0465610:CDS | 50.0% | |
| ! | CAGGATGTCTGTGTTTTCGG+TGG | - | chr3_3:66037980-66037999 | None:intergenic | 50.0% |
| ! | CGGCAGGATGTCTGTGTTTT+CGG | - | chr3_3:66037983-66038002 | None:intergenic | 50.0% |
| TAAGTCCAGCACGATCAGTG+CGG | - | chr3_3:66038003-66038022 | None:intergenic | 50.0% | |
| ATGAAGCCCGGATACGGATA+CGG | + | chr3_3:66038947-66038966 | Msa0465610:intron | 50.0% | |
| GTGGATGAAGGTAACGAGAG+AGG | - | chr3_3:66039154-66039173 | None:intergenic | 50.0% | |
| TTGGGTCCTTATCATGGCAG+GGG | - | chr3_3:66039366-66039385 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+TGG | - | chr3_3:66039812-66039831 | None:intergenic | 50.0% | |
| GTAGGTGCTCCCCATTGAAA+GGG | - | chr3_3:66039818-66039837 | None:intergenic | 50.0% | |
| TGTAGGTGCTCCCCATTGAA+AGG | - | chr3_3:66039819-66039838 | None:intergenic | 50.0% | |
| ! | GGAGCACCTACATTTGATGC+AGG | + | chr3_3:66039827-66039846 | Msa0465610:CDS | 50.0% |
| GCTTCGCCTGCATCAAATGT+AGG | - | chr3_3:66039836-66039855 | None:intergenic | 50.0% | |
| TCTATTCAATTGCCAGGGGC+GGG | + | chr3_3:66040348-66040367 | Msa0465610:intron | 50.0% | |
| CCCCGACTAAGAATAGAAGG+TGG | - | chr3_3:66040593-66040612 | None:intergenic | 50.0% | |
| ! | GGGGTTGGCATTCTTCTATC+TGG | + | chr3_3:66040784-66040803 | Msa0465610:CDS | 50.0% |
| !!! | CTTTTGGCTCTGACACGTGT+TGG | + | chr3_3:66040955-66040974 | Msa0465610:CDS | 50.0% |
| GGGAGAAATGTACTCGGATG+TGG | - | chr3_3:66041084-66041103 | None:intergenic | 50.0% | |
| TCATCATTTGCAGGAGCTGG+AGG | + | chr3_3:66041311-66041330 | Msa0465610:intron | 50.0% | |
| AGTCCACACAGGTGGAAGAT+GGG | + | chr3_3:66041463-66041482 | Msa0465610:CDS | 50.0% | |
| ATACCCATCTTCCACCTGTG+TGG | - | chr3_3:66041469-66041488 | None:intergenic | 50.0% | |
| ACACAGGTGGAAGATGGGTA+TGG | + | chr3_3:66041468-66041487 | Msa0465610:intron | 50.0% | |
| ! | AGCATTTGTTGCGGGTGTTG+TGG | + | chr3_3:66041729-66041748 | Msa0465610:CDS | 50.0% |
| AGGACAGAGGCAAACATTGG+TGG | + | chr3_3:66041800-66041819 | Msa0465610:CDS | 50.0% | |
| GGACAGAGGCAAACATTGGT+GGG | + | chr3_3:66041801-66041820 | Msa0465610:CDS | 50.0% | |
| CAAGGGTGACACAAGAAGTG+AGG | + | chr3_3:66041840-66041859 | Msa0465610:CDS | 50.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | + | chr3_3:66036508-66036527 | Msa0465610:intron | 55.0% | |
| GCTCTTGTTCCTCAGATGGG+AGG | + | chr3_3:66036580-66036599 | Msa0465610:CDS | 55.0% | |
| CTTGTTCCTCAGATGGGAGG+TGG | + | chr3_3:66036583-66036602 | Msa0465610:CDS | 55.0% | |
| ! | TTGCTGCTTGTAGGCGGAGA+AGG | + | chr3_3:66036690-66036709 | Msa0465610:intron | 55.0% |
| TGTAGTCGAAGGCTTACCCC+AGG | - | chr3_3:66037560-66037579 | None:intergenic | 55.0% | |
| GCTGTTCTACTCACGGTTGG+AGG | + | chr3_3:66037938-66037957 | Msa0465610:CDS | 55.0% | |
| ACGGTTGGAGGGGCCTATAA+CGG | + | chr3_3:66037950-66037969 | Msa0465610:CDS | 55.0% | |
| ! | CTGCGCTTGTTAACTAGCGC+AGG | - | chr3_3:66038768-66038787 | None:intergenic | 55.0% |
| GCGCTAGTTAACAAGCGCAG+AGG | + | chr3_3:66038768-66038787 | Msa0465610:intron | 55.0% | |
| TGAAGCCCGGATACGGATAC+GGG | + | chr3_3:66038948-66038967 | Msa0465610:intron | 55.0% | |
| GATACGGGTGCGGTACGATA+CGG | + | chr3_3:66038963-66038982 | Msa0465610:intron | 55.0% | |
| CTATTCAATTGCCAGGGGCG+GGG | + | chr3_3:66040349-66040368 | Msa0465610:intron | 55.0% | |
| TATTCAATTGCCAGGGGCGG+GGG | + | chr3_3:66040350-66040369 | Msa0465610:intron | 55.0% | |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | + | chr3_3:66040604-66040623 | Msa0465610:CDS | 55.0% |
| CATCTTCCACCTGTGTGGAC+TGG | - | chr3_3:66041464-66041483 | None:intergenic | 55.0% | |
| CAGTCCACACAGGTGGAAGA+TGG | + | chr3_3:66041462-66041481 | Msa0465610:CDS | 55.0% | |
| GAAGCTATGGCAGGAGGAGG+AGG | + | chr3_3:66035452-66035471 | Msa0465610:exon | 60.0% | |
| ACCGCACCCGTATCCGTATC+CGG | - | chr3_3:66038957-66038976 | None:intergenic | 60.0% | |
| GGTTATGGGCCAGTCCACAC+AGG | + | chr3_3:66041452-66041471 | Msa0465610:CDS | 60.0% | |
| TATGGGCCAGTCCACACAGG+TGG | + | chr3_3:66041455-66041474 | Msa0465610:CDS | 60.0% | |
| ! | TCCTGCCGCACTGATCGTGC+TGG | + | chr3_3:66037995-66038014 | Msa0465610:CDS | 65.0% |
| TCCAGCACGATCAGTGCGGC+AGG | - | chr3_3:66037999-66038018 | None:intergenic | 65.0% | |
| ! | AGGGCGCGAGCGAAAAGTGC+TGG | + | chr3_3:66038809-66038828 | Msa0465610:intron | 65.0% |
| !! | GGGCGCGAGCGAAAAGTGCT+GGG | + | chr3_3:66038810-66038829 | Msa0465610:intron | 65.0% |
| !! | CGCGAGCGAAAAGTGCTGGG+TGG | + | chr3_3:66038813-66038832 | Msa0465610:intron | 65.0% |
| CCGCACCCGTATCCGTATCC+GGG | - | chr3_3:66038956-66038975 | None:intergenic | 65.0% | |
| CCCGGATACGGATACGGGTG+CGG | + | chr3_3:66038953-66038972 | Msa0465610:intron | 65.0% | |
| AATTGCCAGGGGCGGGGGAT+TGG | + | chr3_3:66040355-66040374 | Msa0465610:intron | 65.0% | |
| TTTGACCAATCCCCCGCCCC+TGG | - | chr3_3:66040363-66040382 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 66035252 | 66042195 | 66035252 | ID=Msa0465610;Name=Msa0465610 |
| chr3_3 | mRNA | 66035252 | 66042195 | 66035252 | ID=Msa0465610-mRNA-1;Parent=Msa0465610;Name=Msa0465610-mRNA-1;_AED=0.18;_eAED=0.18;_QI=101|1|1|1|0.92|0.86|15|283|532 |
| chr3_3 | exon | 66035252 | 66035332 | 66035252 | ID=Msa0465610-mRNA-1:exon:14853;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66035438 | 66035566 | 66035438 | ID=Msa0465610-mRNA-1:exon:14854;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66036512 | 66036609 | 66036512 | ID=Msa0465610-mRNA-1:exon:14855;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66036703 | 66036879 | 66036703 | ID=Msa0465610-mRNA-1:exon:14856;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66037154 | 66037254 | 66037154 | ID=Msa0465610-mRNA-1:exon:14857;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66037487 | 66037562 | 66037487 | ID=Msa0465610-mRNA-1:exon:14858;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66037649 | 66037708 | 66037649 | ID=Msa0465610-mRNA-1:exon:14859;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66037854 | 66038038 | 66037854 | ID=Msa0465610-mRNA-1:exon:14860;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66039799 | 66039895 | 66039799 | ID=Msa0465610-mRNA-1:exon:14861;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66040539 | 66040625 | 66040539 | ID=Msa0465610-mRNA-1:exon:14862;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66040784 | 66040842 | 66040784 | ID=Msa0465610-mRNA-1:exon:14863;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66040942 | 66041033 | 66040942 | ID=Msa0465610-mRNA-1:exon:14864;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66041140 | 66041217 | 66041140 | ID=Msa0465610-mRNA-1:exon:14865;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66041324 | 66041484 | 66041324 | ID=Msa0465610-mRNA-1:exon:14866;Parent=Msa0465610-mRNA-1 |
| chr3_3 | exon | 66041694 | 66042195 | 66041694 | ID=Msa0465610-mRNA-1:exon:14867;Parent=Msa0465610-mRNA-1 |
| chr3_3 | five_prime_UTR | 66035252 | 66035332 | 66035252 | ID=Msa0465610-mRNA-1:five_prime_utr;Parent=Msa0465610-mRNA-1 |
| chr3_3 | five_prime_UTR | 66035438 | 66035457 | 66035438 | ID=Msa0465610-mRNA-1:five_prime_utr;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66035458 | 66035566 | 66035458 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66036512 | 66036609 | 66036512 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66036703 | 66036879 | 66036703 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66037154 | 66037254 | 66037154 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66037487 | 66037562 | 66037487 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66037649 | 66037708 | 66037649 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66037854 | 66038038 | 66037854 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66039799 | 66039895 | 66039799 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66040539 | 66040625 | 66040539 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66040784 | 66040842 | 66040784 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66040942 | 66041033 | 66040942 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66041140 | 66041217 | 66041140 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66041324 | 66041484 | 66041324 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | CDS | 66041694 | 66041912 | 66041694 | ID=Msa0465610-mRNA-1:cds;Parent=Msa0465610-mRNA-1 |
| chr3_3 | three_prime_UTR | 66041913 | 66042195 | 66041913 | ID=Msa0465610-mRNA-1:three_prime_utr;Parent=Msa0465610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
