AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0470580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470580 MtrunA17_Chr3g0125201 99.026 308 3 0 1 308 1 308 0.0 630
Msa0470580 MtrunA17_Chr2g0289341 50.489 307 138 4 4 305 5 302 3.09e-106 312
Msa0470580 MtrunA17_Chr5g0439011 49.196 311 146 3 1 306 3 306 3.30e-106 312
Msa0470580 MtrunA17_Chr3g0121141 50.325 308 137 4 4 306 5 301 4.57e-106 311
Msa0470580 MtrunA17_Chr6g0488511 47.003 317 137 6 1 306 1 297 2.64e-90 271
Msa0470580 MtrunA17_Chr3g0128001 40.803 299 151 9 3 290 38 321 5.56e-69 218
Msa0470580 MtrunA17_Chr8g0345831 41.216 296 150 9 2 286 41 323 1.74e-67 214
Msa0470580 MtrunA17_Chr5g0437181 37.415 294 168 4 3 286 49 336 4.35e-65 208
Msa0470580 MtrunA17_Chr4g0075471 66.906 139 45 1 153 291 22 159 5.80e-65 201
Msa0470580 MtrunA17_Chr4g0006371 38.796 299 162 7 1 286 60 350 9.69e-65 208
Msa0470580 MtrunA17_Chr7g0242551 38.384 297 162 7 3 286 54 342 3.58e-63 204
Msa0470580 MtrunA17_Chr8g0375671 39.350 277 153 5 1 267 50 321 2.25e-62 201
Msa0470580 MtrunA17_Chr3g0113641 36.486 296 168 6 3 286 50 337 8.35e-62 200
Msa0470580 MtrunA17_Chr8g0375601 36.452 310 170 7 3 298 48 344 3.05e-61 199
Msa0470580 MtrunA17_Chr3g0109041 36.393 305 169 7 2 290 41 336 1.92e-58 191
Msa0470580 MtrunA17_Chr8g0375571 35.587 281 160 4 3 270 45 317 2.92e-58 191
Msa0470580 MtrunA17_Chr5g0426891 36.271 295 172 9 3 289 39 325 3.22e-58 190
Msa0470580 MtrunA17_Chr5g0421011 35.667 300 177 5 3 295 47 337 2.90e-57 188
Msa0470580 MtrunA17_Chr1g0162191 39.194 273 153 5 3 267 47 314 1.10e-56 187
Msa0470580 MtrunA17_Chr7g0239111 35.473 296 167 7 3 287 55 337 1.51e-56 186
Msa0470580 MtrunA17_Chr8g0365241 35.793 271 162 2 3 266 57 322 6.99e-56 184
Msa0470580 MtrunA17_Chr5g0420981 34.304 309 190 4 3 303 53 356 1.98e-55 183
Msa0470580 MtrunA17_Chr7g0265221 34.564 298 178 5 1 282 65 361 2.60e-55 184
Msa0470580 MtrunA17_Chr6g0455481 35.238 315 174 10 2 305 41 336 1.63e-54 181
Msa0470580 MtrunA17_Chr1g0179801 36.268 284 162 5 1 271 64 341 1.80e-54 181
Msa0470580 MtrunA17_Chr5g0423221 34.000 300 183 5 3 295 71 362 1.90e-54 181
Msa0470580 MtrunA17_Chr5g0420951 34.767 279 170 2 3 274 53 326 2.87e-54 180
Msa0470580 MtrunA17_Chr7g0239101 33.555 301 182 5 3 295 55 345 2.13e-53 178
Msa0470580 MtrunA17_Chr5g0423191 33.333 300 184 4 3 295 47 337 4.56e-53 177
Msa0470580 MtrunA17_Chr5g0412681 35.216 301 161 10 2 287 32 313 4.78e-53 177
Msa0470580 MtrunA17_Chr7g0239821 34.247 292 176 4 3 287 64 346 5.25e-53 177
Msa0470580 MtrunA17_Chr7g0220001 32.500 320 173 8 2 304 40 333 1.67e-52 175
Msa0470580 MtrunA17_Chr2g0314381 33.910 289 172 5 1 281 75 352 3.82e-52 176
Msa0470580 MtrunA17_Chr5g0421041 36.496 274 161 4 1 267 43 310 4.73e-52 174
Msa0470580 MtrunA17_Chr2g0314401 34.050 279 171 4 1 271 49 322 5.96e-52 174
Msa0470580 MtrunA17_Chr5g0423251 35.636 275 158 5 3 267 47 312 8.03e-52 174
Msa0470580 MtrunA17_Chr8g0375701 34.354 294 174 5 2 283 54 340 8.50e-52 174
Msa0470580 MtrunA17_Chr5g0423201 34.323 303 178 6 3 295 47 338 1.39e-51 173
Msa0470580 MtrunA17_Chr2g0296371 34.211 304 181 6 3 295 50 345 1.60e-51 173
Msa0470580 MtrunA17_Chr7g0239121 34.343 297 170 8 3 287 51 334 2.05e-51 173
Msa0470580 MtrunA17_Chr5g0420941 33.333 300 184 5 3 295 45 335 3.55e-51 172
Msa0470580 MtrunA17_Chr5g0420901 33.000 300 185 5 3 295 46 336 3.92e-51 172
Msa0470580 MtrunA17_Chr4g0045411 33.750 320 174 10 2 296 29 335 5.45e-51 172
Msa0470580 MtrunA17_Chr5g0421101 36.162 271 160 4 3 266 47 311 7.44e-51 171
Msa0470580 MtrunA17_Chr5g0421091 36.496 274 158 6 3 267 45 311 8.16e-51 171
Msa0470580 MtrunA17_Chr5g0412651 34.259 324 178 10 2 308 37 342 8.35e-51 171
Msa0470580 MtrunA17_Chr7g0220011 31.773 299 180 7 2 290 38 322 2.35e-50 169
Msa0470580 MtrunA17_Chr3g0126741 35.507 276 167 6 2 270 58 329 4.12e-50 170
Msa0470580 MtrunA17_Chr8g0375681 37.200 250 139 5 35 274 15 256 4.78e-50 167
Msa0470580 MtrunA17_Chr4g0064781 33.808 281 172 3 1 274 48 321 5.17e-50 169
Msa0470580 MtrunA17_Chr4g0050031 34.237 295 179 7 3 289 62 349 8.51e-50 169
Msa0470580 MtrunA17_Chr5g0398291 34.173 278 167 6 3 267 47 321 1.47e-49 168
Msa0470580 MtrunA17_Chr1g0184161 32.353 306 171 8 2 290 37 323 3.10e-49 167
Msa0470580 MtrunA17_Chr3g0087031 32.131 305 185 6 1 295 58 350 5.67e-49 167
Msa0470580 MtrunA17_Chr1g0162351 34.769 325 169 12 3 296 69 381 1.16e-48 167
Msa0470580 MtrunA17_Chr1g0184101 35.106 282 160 8 3 272 38 308 1.39e-48 165
Msa0470580 MtrunA17_Chr5g0424201 34.228 298 173 7 1 287 42 327 2.15e-48 164
Msa0470580 MtrunA17_Chr2g0314391 33.577 274 169 4 1 266 68 336 3.00e-48 165
Msa0470580 MtrunA17_Chr5g0412671 34.783 322 175 10 2 306 37 340 4.94e-48 164
Msa0470580 MtrunA17_Chr1g0162361 33.333 291 161 7 3 271 27 306 1.68e-47 162
Msa0470580 MtrunA17_Chr1g0162321 33.851 322 176 9 3 296 69 381 2.40e-47 163
Msa0470580 MtrunA17_Chr5g0423211 32.673 303 184 7 3 295 47 339 3.18e-47 162
Msa0470580 MtrunA17_Chr3g0114861 34.643 280 166 5 1 271 38 309 3.43e-47 161
Msa0470580 MtrunA17_Chr1g0184121 33.448 290 169 8 2 278 36 314 4.90e-47 161
Msa0470580 MtrunA17_Chr8g0371931 34.066 273 159 7 3 262 39 303 5.13e-47 162
Msa0470580 MtrunA17_Chr3g0145171 31.884 276 176 4 1 268 50 321 8.09e-47 161
Msa0470580 MtrunA17_Chr1g0184111 32.468 308 179 11 2 295 36 328 8.51e-47 160
Msa0470580 MtrunA17_Chr7g0232161 36.327 245 135 6 3 236 60 294 3.36e-46 158
Msa0470580 MtrunA17_Chr5g0424211 32.155 283 172 6 1 271 40 314 1.26e-45 157
Msa0470580 MtrunA17_Chr2g0311631 33.333 303 169 10 3 287 55 342 2.97e-45 157
Msa0470580 MtrunA17_Chr7g0239071 30.693 303 177 5 8 295 6 290 5.56e-45 155
Msa0470580 MtrunA17_Chr1g0184151 32.333 300 179 9 2 290 37 323 6.33e-45 155
Msa0470580 MtrunA17_Chr2g0319491 31.058 293 173 9 3 286 33 305 1.06e-44 154
Msa0470580 MtrunA17_Chr2g0311681 32.576 264 154 7 1 252 61 312 1.46e-44 155
Msa0470580 MtrunA17_Chr2g0311711 32.753 287 165 9 1 271 65 339 1.96e-44 155
Msa0470580 MtrunA17_Chr2g0311691 31.633 294 168 11 1 274 61 341 3.76e-44 154
Msa0470580 MtrunA17_Chr5g0405411 33.942 274 158 8 3 262 39 303 4.50e-44 154
Msa0470580 MtrunA17_Chr1g0187831 32.895 304 183 11 3 295 70 363 7.18e-44 154
Msa0470580 MtrunA17_Chr8g0370711 31.868 273 174 3 3 267 52 320 1.31e-43 152
Msa0470580 MtrunA17_Chr8g0371921 32.258 279 156 8 3 262 39 303 1.80e-43 152
Msa0470580 MtrunA17_Chr3g0102041 32.975 279 154 8 3 262 39 303 2.25e-43 152
Msa0470580 MtrunA17_Chr2g0311921 29.642 307 179 8 3 290 54 342 4.63e-43 151
Msa0470580 MtrunA17_Chr7g0250511 31.894 301 174 8 2 287 48 332 6.44e-43 150
Msa0470580 MtrunA17_Chr2g0311701 30.769 286 175 7 1 271 67 344 6.60e-43 151
Msa0470580 MtrunA17_Chr8g0336851 32.979 282 169 9 2 271 59 332 7.01e-43 150
Msa0470580 MtrunA17_Chr8g0348081 31.169 308 186 11 2 296 59 353 1.87e-42 150
Msa0470580 MtrunA17_Chr8g0336761 32.028 281 173 9 2 271 59 332 2.70e-42 149
Msa0470580 MtrunA17_Chr1g0187821 30.421 309 177 11 1 288 65 356 3.40e-42 149
Msa0470580 MtrunA17_Chr8g0336781 32.039 309 183 11 2 296 94 389 7.79e-42 149
Msa0470580 MtrunA17_Chr4g0045451 33.110 299 162 10 2 271 25 314 9.87e-42 147
Msa0470580 MtrunA17_Chr1g0167911 32.993 294 173 10 3 282 54 337 1.88e-41 147
Msa0470580 MtrunA17_Chr8g0370721 31.136 273 176 3 3 267 52 320 2.25e-41 147
Msa0470580 MtrunA17_Chr2g0311831 32.119 302 173 12 3 288 68 353 3.53e-41 146
Msa0470580 MtrunA17_Chr8g0336751 32.394 284 169 9 1 271 92 365 4.60e-41 147
Msa0470580 MtrunA17_Chr2g0311761 33.003 303 179 12 3 292 68 359 5.84e-41 146
Msa0470580 MtrunA17_Chr1g0187811 30.392 306 183 10 1 288 186 479 8.87e-41 148
Msa0470580 MtrunA17_Chr4g0045441 32.095 296 159 8 4 271 33 314 1.19e-40 144
Msa0470580 MtrunA17_Chr3g0092531 31.683 303 189 7 3 297 6 298 2.39e-40 143
Msa0470580 MtrunA17_Chr2g0311741 31.469 286 167 10 1 271 25 296 2.77e-40 143
Msa0470580 MtrunA17_Chr8g0336861 30.945 307 186 11 2 294 59 353 4.92e-40 143
Msa0470580 MtrunA17_Chr1g0148771 30.464 302 178 8 2 292 62 342 8.68e-40 142
Msa0470580 MtrunA17_Chr2g0311861 31.419 296 167 10 3 290 64 331 1.70e-39 141
Msa0470580 MtrunA17_Chr4g0066121 31.126 302 185 11 2 291 59 349 1.76e-39 142
Msa0470580 MtrunA17_Chr2g0314371 33.077 260 127 5 1 224 50 298 3.48e-39 140
Msa0470580 MtrunA17_Chr3g0145181 28.417 278 184 4 1 267 47 320 4.41e-39 140
Msa0470580 MtrunA17_Chr8g0354261 32.090 268 152 9 1 252 66 319 6.20e-39 140
Msa0470580 MtrunA17_Chr7g0225881 32.248 307 170 14 3 290 67 354 1.07e-38 140
Msa0470580 MtrunA17_Chr4g0045471 30.159 315 180 10 2 287 25 328 1.18e-38 139
Msa0470580 MtrunA17_Chr8g0354241 31.142 289 175 12 1 274 66 345 1.33e-38 140
Msa0470580 MtrunA17_Chr2g0332191 31.136 273 173 6 3 267 52 317 1.86e-38 139
Msa0470580 MtrunA17_Chr8g0364471 31.365 271 148 9 1 252 65 316 1.92e-38 139
Msa0470580 MtrunA17_Chr4g0055591 31.321 265 149 8 2 252 60 305 2.02e-38 139
Msa0470580 MtrunA17_Chr7g0239091 28.025 314 193 8 3 306 160 450 2.80e-38 140
Msa0470580 MtrunA17_Chr2g0285931 31.353 303 174 11 2 286 27 313 3.20e-38 138
Msa0470580 MtrunA17_Chr3g0125421 31.373 306 180 9 1 287 34 328 4.72e-38 138
Msa0470580 MtrunA17_Chr7g0235951 32.184 261 159 9 1 252 65 316 7.99e-38 137
Msa0470580 MtrunA17_Chr1g0184241 31.317 281 167 8 3 271 69 335 1.45e-37 137
Msa0470580 MtrunA17_Chr3g0114871 36.596 235 129 7 1 224 40 265 2.47e-37 134
Msa0470580 MtrunA17_Chr8g0336631 29.195 298 195 8 2 290 59 349 6.50e-37 135
Msa0470580 MtrunA17_Chr3g0145201 28.417 278 184 4 1 267 682 955 8.39e-37 139
Msa0470580 MtrunA17_Chr1g0204181 27.575 301 192 7 1 284 57 348 1.25e-36 134
Msa0470580 MtrunA17_Chr4g0068891 29.431 299 179 9 3 286 20 301 2.44e-36 132
Msa0470580 MtrunA17_Chr2g0313111 30.405 296 178 11 2 286 27 305 3.52e-36 132
Msa0470580 MtrunA17_Chr4g0045431 30.255 314 180 10 2 287 25 327 4.95e-36 132
Msa0470580 MtrunA17_Chr6g0474391 27.483 302 189 7 1 283 62 352 1.34e-35 132
Msa0470580 MtrunA17_Chr8g0351101 28.094 299 190 8 1 283 52 341 1.74e-35 131
Msa0470580 MtrunA17_Chr1g0167961 31.142 289 164 9 2 271 68 340 2.51e-35 131
Msa0470580 MtrunA17_Chr6g0472861 30.097 309 174 12 3 290 70 357 3.69e-35 130
Msa0470580 MtrunA17_Chr3g0093761 30.464 302 178 11 2 290 55 337 2.59e-34 128
Msa0470580 MtrunA17_Chr1g0191201 28.477 302 190 7 3 287 53 345 3.69e-34 128
Msa0470580 MtrunA17_Chr3g0130391 27.181 298 191 7 4 284 67 355 4.50e-34 128
Msa0470580 MtrunA17_Chr3g0093741 29.470 302 182 10 2 290 55 338 5.23e-34 127
Msa0470580 MtrunA17_Chr8g0358941 30.868 311 179 14 3 293 27 321 6.17e-34 126
Msa0470580 MtrunA17_Chr3g0093751 29.431 299 186 8 2 290 55 338 6.71e-34 127
Msa0470580 MtrunA17_Chr8g0335411 30.293 307 188 12 1 292 65 360 1.44e-33 126
Msa0470580 MtrunA17_Chr7g0247991 29.487 312 179 12 1 290 65 357 1.92e-33 126
Msa0470580 MtrunA17_Chr5g0420721 33.846 195 119 3 102 295 54 239 2.98e-33 123
Msa0470580 MtrunA17_Chr1g0167951 30.000 290 167 10 2 272 52 324 1.07e-32 124
Msa0470580 MtrunA17_Chr1g0194321 27.619 315 191 10 1 291 18 319 1.53e-32 123
Msa0470580 MtrunA17_Chr1g0167931 29.710 276 146 7 2 271 53 286 2.63e-32 122
Msa0470580 MtrunA17_Chr1g0161041 29.773 309 171 12 3 290 96 379 3.00e-32 123
Msa0470580 MtrunA17_Chr4g0053251 28.616 318 183 10 2 287 7 312 5.29e-32 121
Msa0470580 MtrunA17_Chr4g0011311 30.303 264 149 9 1 248 65 309 8.04e-32 120
Msa0470580 MtrunA17_Chr7g0266651 30.714 280 166 9 2 262 58 328 1.02e-31 121
Msa0470580 MtrunA17_Chr7g0235981 33.906 233 121 8 35 252 56 270 1.48e-31 120
Msa0470580 MtrunA17_Chr3g0105281 30.303 264 157 7 3 254 34 282 2.13e-31 119
Msa0470580 MtrunA17_Chr4g0066991 32.558 258 142 10 1 252 65 296 6.17e-31 119
Msa0470580 MtrunA17_Chr3g0126761 35.484 186 112 3 110 295 44 221 1.57e-30 115
Msa0470580 MtrunA17_Chr4g0052251 29.032 310 189 12 2 295 28 322 2.13e-30 117
Msa0470580 MtrunA17_Chr7g0236011 29.934 304 188 11 1 290 65 357 2.33e-30 117
Msa0470580 MtrunA17_Chr1g0161081 28.615 325 164 14 3 295 73 361 1.72e-29 115
Msa0470580 MtrunA17_Chr1g0161111 29.299 314 179 13 3 299 132 419 2.54e-29 115
Msa0470580 MtrunA17_Chr7g0265351 28.947 304 181 12 2 290 38 321 3.43e-29 114
Msa0470580 MtrunA17_Chr8g0384461 29.779 272 164 8 1 254 45 307 3.83e-28 111
Msa0470580 MtrunA17_Chr5g0420881 41.667 108 63 0 160 267 1 108 1.11e-27 105
Msa0470580 MtrunA17_Chr1g0158011 34.071 226 141 6 48 271 10 229 3.73e-27 107
Msa0470580 MtrunA17_Chr4g0064771 33.333 171 103 2 111 281 27 186 3.77e-27 105
Msa0470580 MtrunA17_Chr5g0407781 27.273 297 197 6 3 295 5 286 7.79e-27 107
Msa0470580 MtrunA17_Chr8g0362741 30.802 237 123 8 1 224 65 273 2.16e-26 105
Msa0470580 MtrunA17_Chr4g0075431 40.361 166 86 5 4 164 5 162 3.89e-26 102
Msa0470580 MtrunA17_Chr4g0037611 36.025 161 87 5 127 286 8 153 4.24e-26 102
Msa0470580 MtrunA17_Chr4g0055911 30.293 307 181 14 1 287 7 300 7.72e-26 104
Msa0470580 MtrunA17_Chr5g0394071 33.898 177 96 4 113 286 5 163 1.31e-25 100
Msa0470580 MtrunA17_Chr1g0170631 33.152 184 111 4 110 291 3 176 2.42e-25 100
Msa0470580 MtrunA17_Chr8g0384481 25.667 300 190 9 1 281 57 342 5.28e-25 103
Msa0470580 MtrunA17_Chr6g0486831 30.032 313 177 11 5 288 23 322 5.57e-25 102
Msa0470580 MtrunA17_Chr5g0407731 26.117 291 196 5 3 289 33 308 4.04e-24 100
Msa0470580 MtrunA17_Chr8g0348951 25.926 297 195 10 3 287 10 293 9.42e-24 99.0
Msa0470580 MtrunA17_Chr7g0233661 44.118 102 56 1 159 260 20 120 9.52e-24 95.1
Msa0470580 MtrunA17_Chr1g0158021 31.278 227 129 7 3 216 49 261 1.66e-23 97.1
Msa0470580 MtrunA17_Chr8g0336801 34.815 135 81 3 162 293 13 143 4.26e-23 93.2
Msa0470580 MtrunA17_Chr8g0389941 28.479 309 185 10 5 288 36 333 5.57e-23 97.4
Msa0470580 MtrunA17_Chr4g0045461 28.302 318 178 10 2 286 25 325 1.23e-22 96.7
Msa0470580 MtrunA17_Chr3g0092581 31.461 178 114 4 120 297 1 170 1.99e-22 92.4
Msa0470580 MtrunA17_Chr2g0319521 39.344 122 69 3 106 224 5 124 3.44e-21 87.8
Msa0470580 MtrunA17_Chr4g0055871 28.889 270 163 12 3 255 9 266 1.60e-20 89.7
Msa0470580 MtrunA17_Chr4g0004071 26.481 287 187 8 3 279 9 281 2.92e-20 89.4
Msa0470580 MtrunA17_Chr2g0293931 33.136 169 102 6 111 272 8 172 3.00e-20 87.0
Msa0470580 MtrunA17_Chr8g0336871 31.250 176 103 6 123 295 3 163 3.40e-20 85.9
Msa0470580 MtrunA17_Chr7g0247741 25.597 293 200 9 3 287 11 293 4.02e-20 89.0
Msa0470580 MtrunA17_Chr8g0364171 36.000 125 69 4 108 229 16 132 5.41e-20 84.7
Msa0470580 MtrunA17_Chr4g0009561 25.658 304 196 10 3 287 7 299 9.88e-20 87.8
Msa0470580 MtrunA17_Chr8g0375581 50.000 62 31 0 159 220 24 85 1.99e-19 81.3
Msa0470580 MtrunA17_Chr3g0138351 26.923 286 189 9 1 271 5 285 4.68e-19 85.9
Msa0470580 MtrunA17_Chr4g0004061 23.810 294 208 5 3 286 9 296 2.66e-18 83.6
Msa0470580 MtrunA17_Chr7g0256741 25.857 321 197 9 3 303 10 309 1.13e-17 82.0
Msa0470580 MtrunA17_Chr7g0219991 37.273 110 61 2 111 219 249 351 2.27e-17 81.6
Msa0470580 MtrunA17_Chr1g0158031 31.613 155 96 5 120 271 1 148 1.29e-16 76.3
Msa0470580 MtrunA17_Chr8g0336831 27.461 193 123 7 2 184 59 244 1.29e-15 75.1
Msa0470580 MtrunA17_Chr4g0009541 27.670 206 135 7 84 287 103 296 1.98e-15 75.5
Msa0470580 MtrunA17_Chr2g0311611 43.056 72 33 2 160 224 1 71 1.32e-14 67.8
Msa0470580 MtrunA17_Chr8g0375641 37.000 100 60 1 1 97 50 149 2.57e-14 70.1
Msa0470580 MtrunA17_Chr1g0167921 34.234 111 67 3 113 223 52 156 1.97e-13 67.4
Msa0470580 MtrunA17_Chr8g0375661 35.000 100 62 1 1 97 50 149 8.30e-13 65.5
Msa0470580 MtrunA17_Chr8g0340641 24.028 283 170 8 4 254 70 339 1.68e-12 67.4
Msa0470580 MtrunA17_Chr5g0420891 36.170 94 59 1 3 96 46 138 4.67e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470580 AT1G77330.1 72.524 313 75 4 1 308 1 307 1.57e-164 460
Msa0470580 AT1G62380.1 50.161 311 138 4 1 306 5 303 4.30e-109 320
Msa0470580 AT1G12010.1 50.325 308 136 4 4 306 8 303 4.22e-105 310
Msa0470580 AT1G05010.1 49.363 314 145 5 2 308 3 309 5.61e-102 302
Msa0470580 AT2G19590.1 44.762 315 148 6 1 308 9 304 1.15e-86 262
Msa0470580 AT2G19590.2 44.523 283 131 6 33 308 26 289 3.78e-71 222
Msa0470580 AT5G24530.1 40.476 294 152 6 4 286 39 320 1.65e-70 222
Msa0470580 AT4G10490.1 35.831 307 171 9 2 295 41 334 1.33e-61 199
Msa0470580 AT5G05600.1 36.395 294 171 4 3 286 62 349 3.05e-61 199
Msa0470580 AT4G10500.1 36.486 296 166 8 2 285 43 328 5.01e-61 198
Msa0470580 AT2G38240.1 33.333 300 186 4 1 293 46 338 6.18e-60 195
Msa0470580 AT3G11180.1 36.054 294 172 5 1 286 93 378 3.08e-56 187
Msa0470580 AT3G11180.2 36.054 294 172 5 1 286 93 378 3.61e-56 187
Msa0470580 AT5G08640.2 35.811 296 167 7 2 286 42 325 1.02e-55 184
Msa0470580 AT5G08640.1 35.811 296 167 7 2 286 42 325 1.02e-55 184
Msa0470580 AT3G55970.1 35.231 281 169 4 2 271 51 329 2.40e-55 184
Msa0470580 AT4G16330.2 33.223 301 171 7 2 290 66 348 4.34e-55 183
Msa0470580 AT1G78550.1 33.813 278 171 3 3 272 53 325 2.28e-51 173
Msa0470580 AT3G19010.1 36.054 294 153 7 3 271 28 311 3.59e-50 170
Msa0470580 AT3G19010.4 36.054 294 153 7 3 271 28 311 3.59e-50 170
Msa0470580 AT1G17010.1 32.000 275 175 3 3 269 54 324 3.92e-50 170
Msa0470580 AT1G17020.1 32.491 277 176 3 1 269 51 324 5.24e-50 169
Msa0470580 AT2G36690.2 35.135 296 168 9 1 282 59 344 5.83e-50 170
Msa0470580 AT2G36690.1 35.135 296 168 9 1 282 59 344 5.83e-50 170
Msa0470580 AT3G21420.1 34.868 304 180 6 3 295 55 351 3.96e-49 167
Msa0470580 AT5G20400.1 32.990 291 182 4 1 282 43 329 6.67e-49 166
Msa0470580 AT3G12900.1 33.667 300 172 8 6 293 59 343 1.57e-48 166
Msa0470580 AT3G19000.1 35.179 307 168 7 3 287 32 329 4.66e-48 164
Msa0470580 AT1G49390.1 32.993 294 178 4 1 282 43 329 1.00e-47 163
Msa0470580 AT5G05600.2 36.207 232 135 3 3 224 62 290 3.47e-47 160
Msa0470580 AT4G25310.1 34.661 251 150 3 26 269 76 319 7.35e-46 159
Msa0470580 AT1G55290.1 33.779 299 168 10 2 287 61 342 1.20e-45 158
Msa0470580 AT4G25300.1 32.014 278 171 5 3 269 52 322 1.62e-45 158
Msa0470580 AT4G22880.1 30.968 310 191 8 3 299 47 346 1.70e-45 158
Msa0470580 AT4G22880.2 30.968 310 191 8 3 299 47 346 1.70e-45 158
Msa0470580 AT4G22880.3 30.968 310 191 8 3 299 47 346 1.70e-45 158
Msa0470580 AT5G54000.2 32.472 271 170 3 1 262 44 310 2.54e-45 157
Msa0470580 AT5G63590.1 34.228 298 172 8 1 286 12 297 3.17e-45 155
Msa0470580 AT3G51240.1 33.333 273 161 7 3 262 38 302 3.51e-45 157
Msa0470580 AT2G44800.1 31.190 311 181 9 2 296 51 344 6.82e-45 156
Msa0470580 AT4G21200.1 36.000 300 158 10 3 283 42 326 8.66e-45 155
Msa0470580 AT5G20550.1 34.875 281 153 7 1 263 43 311 9.54e-45 155
Msa0470580 AT4G16330.1 38.095 210 110 4 88 290 46 242 1.13e-44 153
Msa0470580 AT5G63595.1 35.206 267 141 8 4 264 26 266 1.77e-43 150
Msa0470580 AT1G78550.2 33.468 248 153 2 32 272 5 247 2.55e-43 150
Msa0470580 AT3G55970.2 33.761 234 142 4 2 224 51 282 3.08e-43 150
Msa0470580 AT3G19000.2 35.714 252 134 6 3 232 32 277 1.23e-42 148
Msa0470580 AT1G49390.2 33.071 254 159 2 36 282 1 250 1.81e-42 147
Msa0470580 AT3G19010.2 37.097 248 121 7 3 225 28 265 3.76e-42 147
Msa0470580 AT3G19010.3 33.103 290 137 5 3 271 28 281 4.80e-42 148
Msa0470580 AT3G13610.1 31.457 302 177 10 2 290 61 345 5.43e-42 149
Msa0470580 AT5G59530.1 32.155 283 174 8 1 271 56 332 6.04e-42 149
Msa0470580 AT3G60290.1 32.890 301 169 11 3 287 52 335 1.31e-41 147
Msa0470580 AT1G44090.1 29.667 300 187 7 1 284 61 352 2.92e-41 147
Msa0470580 AT5G54000.1 34.188 234 143 2 36 262 1 230 1.01e-40 143
Msa0470580 AT5G43450.1 30.868 311 188 10 1 296 59 357 1.46e-40 145
Msa0470580 AT5G63600.1 30.169 295 179 7 3 287 33 310 3.69e-40 143
Msa0470580 AT5G07480.1 30.945 307 174 9 3 287 44 334 7.88e-40 143
Msa0470580 AT1G06620.1 34.082 267 158 9 1 258 60 317 1.26e-39 142
Msa0470580 AT5G63600.2 30.405 296 178 8 3 287 33 311 2.14e-39 141
Msa0470580 AT1G04380.1 31.250 304 184 9 1 293 43 332 3.19e-38 138
Msa0470580 AT1G03410.2 31.343 268 164 10 1 257 55 313 8.31e-37 135
Msa0470580 AT5G59540.1 30.556 288 171 10 1 271 59 334 1.07e-36 135
Msa0470580 AT1G03410.1 31.343 268 164 10 1 257 92 350 1.35e-36 135
Msa0470580 AT1G15550.1 28.571 273 181 5 3 268 57 322 1.42e-36 134
Msa0470580 AT1G47990.1 30.693 303 173 10 3 286 15 299 2.31e-36 133
Msa0470580 AT5G43440.1 29.904 311 197 10 1 298 60 362 2.57e-36 134
Msa0470580 AT2G30830.1 32.982 285 167 11 1 271 52 326 3.16e-36 133
Msa0470580 AT1G60980.1 27.362 307 191 8 1 287 55 349 4.83e-36 133
Msa0470580 AT1G03400.1 32.453 265 158 10 1 258 54 304 6.03e-36 132
Msa0470580 AT2G30840.1 32.404 287 167 10 1 271 55 330 9.97e-36 132
Msa0470580 AT1G04350.1 30.851 282 175 11 1 271 56 328 1.99e-35 131
Msa0470580 AT4G25420.1 26.384 307 193 8 1 287 59 352 2.28e-35 131
Msa0470580 AT1G80330.1 31.159 276 172 8 2 266 48 316 4.51e-35 130
Msa0470580 AT1G30040.1 30.519 308 184 13 2 295 30 321 9.24e-35 129
Msa0470580 AT5G63580.2 33.621 232 136 5 2 224 18 240 1.11e-34 126
Msa0470580 AT5G63580.1 33.478 230 135 5 2 222 18 238 2.55e-34 125
Msa0470580 AT1G80340.1 27.000 300 198 8 3 293 50 337 4.73e-34 127
Msa0470580 AT1G06650.2 30.877 285 155 12 2 266 63 325 6.39e-34 127
Msa0470580 AT3G51240.2 37.705 183 99 4 89 262 42 218 7.97e-34 125
Msa0470580 AT1G78440.1 27.244 312 172 11 3 286 18 302 1.44e-33 125
Msa0470580 AT5G51810.1 25.581 301 199 5 1 287 61 350 1.57e-33 127
Msa0470580 AT2G34555.1 31.803 305 176 13 1 290 25 312 2.51e-33 125
Msa0470580 AT3G50210.4 27.744 328 199 8 2 295 7 330 2.60e-33 125
Msa0470580 AT3G50210.1 27.744 328 199 8 2 295 7 330 2.60e-33 125
Msa0470580 AT3G50210.3 27.744 328 199 8 2 295 7 330 2.60e-33 125
Msa0470580 AT3G61400.1 28.618 304 192 10 5 295 69 360 7.51e-33 125
Msa0470580 AT5G07200.1 26.885 305 198 7 1 287 56 353 1.48e-32 124
Msa0470580 AT5G43935.1 30.068 296 165 10 3 287 19 283 4.05e-32 121
Msa0470580 AT2G30840.3 32.056 287 162 11 1 271 55 324 6.11e-32 122
Msa0470580 AT1G06645.1 29.066 289 169 9 2 271 76 347 1.06e-31 122
Msa0470580 AT5G43450.2 32.618 233 135 8 1 223 59 279 2.08e-31 119
Msa0470580 AT3G49630.1 30.063 316 183 12 3 287 9 317 2.79e-31 120
Msa0470580 AT3G49630.3 29.110 292 179 10 17 287 29 313 5.02e-31 119
Msa0470580 AT4G25300.2 36.646 161 98 1 109 269 72 228 7.69e-31 117
Msa0470580 AT4G25310.2 30.677 251 132 4 26 269 76 291 9.58e-31 118
Msa0470580 AT1G06620.2 33.621 232 136 9 2 224 61 283 1.23e-30 117
Msa0470580 AT1G03400.2 33.068 251 141 11 1 238 54 290 1.37e-30 119
Msa0470580 AT1G50960.1 30.112 269 170 8 1 260 38 297 1.49e-30 118
Msa0470580 AT2G25450.1 31.203 266 156 10 1 252 53 305 1.67e-30 118
Msa0470580 AT1G06640.1 30.034 293 164 13 2 271 63 337 2.65e-30 118
Msa0470580 AT1G04380.2 32.051 234 140 7 1 226 43 265 3.31e-29 112
Msa0470580 AT3G49620.1 27.937 315 191 11 3 287 34 342 9.31e-29 113
Msa0470580 AT2G30840.2 32.203 236 136 8 1 223 55 279 8.88e-28 110
Msa0470580 AT5G07480.2 34.091 176 104 3 102 271 43 212 9.01e-28 108
Msa0470580 AT5G12270.1 27.667 300 193 9 3 290 56 343 1.13e-27 110
Msa0470580 AT1G02400.1 27.508 309 174 13 4 286 25 309 1.17e-27 110
Msa0470580 AT5G59540.2 31.092 238 138 9 1 224 59 284 1.48e-27 108
Msa0470580 AT1G06650.1 30.833 240 131 9 2 223 63 285 1.68e-27 109
Msa0470580 AT4G23340.1 31.179 263 158 9 1 251 8 259 2.02e-27 109
Msa0470580 AT4G21690.1 24.918 305 203 8 3 293 47 339 3.12e-27 109
Msa0470580 AT5G43440.2 31.197 234 145 8 1 226 60 285 3.94e-27 107
Msa0470580 AT3G61400.2 31.034 232 136 9 5 224 69 288 6.67e-26 104
Msa0470580 AT3G47190.1 28.782 271 160 8 3 254 32 288 2.22e-24 101
Msa0470580 AT1G06640.2 29.555 247 139 10 2 230 63 292 3.66e-24 100
Msa0470580 AT1G06640.3 30.380 237 130 10 2 220 63 282 1.37e-23 98.2
Msa0470580 AT1G14130.1 28.014 282 177 9 3 274 9 274 1.84e-23 98.2
Msa0470580 AT5G58660.1 27.148 291 166 8 3 260 34 311 3.74e-23 98.2
Msa0470580 AT4G25420.2 25.820 244 151 8 1 224 59 292 3.84e-22 94.4
Msa0470580 AT5G51810.2 24.896 241 159 5 1 227 61 293 4.84e-22 94.4
Msa0470580 AT5G51310.1 26.710 307 193 14 1 287 3 297 7.11e-22 94.4
Msa0470580 AT3G49630.2 31.250 192 121 6 100 287 60 244 8.94e-22 92.8
Msa0470580 AT1G52820.1 25.517 290 194 6 1 281 10 286 2.43e-21 92.8
Msa0470580 AT3G50210.2 29.064 203 133 4 100 295 50 248 4.93e-20 87.8
Msa0470580 AT1G30040.2 28.270 237 143 12 2 224 30 253 2.10e-19 86.3
Msa0470580 AT3G46490.1 28.144 334 188 12 2 307 16 325 5.37e-19 86.3
Msa0470580 AT1G14120.2 25.784 287 186 7 2 281 7 273 9.49e-19 85.5
Msa0470580 AT1G14120.1 25.784 287 186 7 2 281 7 273 9.49e-19 85.5
Msa0470580 AT1G14120.3 25.784 287 186 7 2 281 7 273 9.49e-19 85.5
Msa0470580 AT3G46500.5 26.471 306 195 10 2 288 16 310 1.27e-18 85.1
Msa0470580 AT1G35190.1 27.857 280 171 9 1 254 7 281 1.81e-18 84.7
Msa0470580 AT5G58660.2 26.378 254 142 7 3 224 34 274 5.82e-18 82.4
Msa0470580 AT1G35190.2 27.599 279 150 9 1 254 7 258 8.31e-18 82.4
Msa0470580 AT4G03070.1 23.588 301 207 9 3 290 14 304 3.70e-17 80.9
Msa0470580 AT3G46490.2 29.496 278 157 10 2 251 16 282 5.69e-17 80.1
Msa0470580 AT3G46500.7 26.619 278 176 9 2 260 16 284 1.80e-16 78.6
Msa0470580 AT4G23340.2 32.044 181 110 7 113 287 1 174 6.01e-16 75.5
Msa0470580 AT4G22870.1 36.111 108 61 3 193 299 2 102 8.73e-15 69.7
Msa0470580 AT1G02400.2 24.096 249 143 11 4 227 25 252 1.73e-13 69.7
Msa0470580 AT1G52820.2 25.641 234 157 7 1 224 10 236 8.64e-13 67.4
Msa0470580 AT4G16765.6 27.391 230 136 10 73 287 23 236 1.18e-12 67.0
Msa0470580 AT4G16765.1 27.391 230 136 10 73 287 23 236 1.18e-12 67.0
Msa0470580 AT4G16765.2 27.391 230 136 10 73 287 23 236 1.18e-12 67.0
Msa0470580 AT1G52800.1 23.846 260 180 7 3 251 10 262 1.19e-12 67.8
Msa0470580 AT1G80320.1 22.837 289 198 10 2 279 8 282 4.15e-12 66.2
Msa0470580 AT4G16765.3 29.442 197 111 9 73 254 23 206 5.23e-12 65.1
Msa0470580 AT4G22870.2 33.981 103 60 3 198 299 48 143 7.17e-12 62.8

Find 113 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGCCATTCTGTTAATAA+TGG 0.222884 3_3:+72711577 Msa0470580:three_prime_UTR
GTTAATAATGGGAACCATAA+TGG 0.240425 3_3:+72711589 Msa0470580:three_prime_UTR
ATTCAGAAGCTTCACTGTTT+TGG 0.241962 3_3:-72710267 None:intergenic
CAGGACTTATAGTGGCCTTC+AGG 0.253489 3_3:-72711300 None:intergenic
GGAGGATGTTATCACTCTTT+TGG 0.259721 3_3:+72710337 Msa0470580:CDS
CAGAAAATACACCAAGTTTC+AGG 0.278523 3_3:+72710375 Msa0470580:CDS
GAAAATACTAATACCCATTA+TGG 0.290791 3_3:-72711603 None:intergenic
GAAGGAGACAATGCTTTCTT+TGG 0.308916 3_3:+72710983 Msa0470580:CDS
AGCAATCTGTGCCAAAGTTT+TGG 0.312956 3_3:-72709979 None:intergenic
CTTACTTTCATATATAAATC+TGG 0.327168 3_3:+72711471 Msa0470580:three_prime_UTR
AGAAGTGATGGATGAGAATC+TGG 0.327468 3_3:+72710919 Msa0470580:CDS
CGGAGACCATTCACAAGTTC+TGG 0.339883 3_3:-72711040 None:intergenic
GTTGCCATTCTGTTAATAAT+GGG 0.352808 3_3:+72711578 Msa0470580:three_prime_UTR
GCTCTAAACCTTGGTTCCTT+GGG 0.361027 3_3:-72711424 None:intergenic
AGCTCTAAACCTTGGTTCCT+TGG 0.362385 3_3:-72711425 None:intergenic
CCCCATCTTTGAGCATTTGA+AGG 0.370292 3_3:-72711120 None:intergenic
GCCTTCTTGATATATCCTTT+TGG 0.371059 3_3:-72710947 None:intergenic
GGAGATTGTATGCATACATC+TGG 0.376976 3_3:+72711670 Msa0470580:three_prime_UTR
CCTTGTCATCTTGGAATAGT+AGG 0.383165 3_3:-72711090 None:intergenic
GGCCACCTACCTTGTCATCT+TGG 0.385632 3_3:-72711099 None:intergenic
TTAATAATGGGAACCATAAT+GGG 0.393080 3_3:+72711590 Msa0470580:three_prime_UTR
GTTGATCAATCACGGCATTT+CGG 0.399516 3_3:+72710169 Msa0470580:intron
TGCTTTATCTTCAACTGTAA+TGG 0.404595 3_3:+72711645 Msa0470580:three_prime_UTR
TCGGTCTGAGTTAAAGAAAC+TGG 0.406446 3_3:+72710883 Msa0470580:CDS
TATAAGTCCTGCACCACAAT+TGG 0.410463 3_3:+72711312 Msa0470580:CDS
CTTATAGTGGCCTTCAGGGG+TGG 0.418937 3_3:-72711295 None:intergenic
AGAAAAGTTAAGATAAGAAA+AGG 0.420501 3_3:-72709901 None:intergenic
ACTTTGGCACAGATTGCTAA+TGG 0.421342 3_3:+72709984 Msa0470580:CDS
CTTCAGGGGTGGGTTATAGA+AGG 0.421469 3_3:-72711284 None:intergenic
GATAAGTGTCATCGACTTGT+TGG 0.430160 3_3:-72711348 None:intergenic
CACAAGTTCTGGACGAGGGC+AGG 0.440502 3_3:-72711029 None:intergenic
TTATAGTGGCCTTCAGGGGT+GGG 0.443347 3_3:-72711294 None:intergenic
ACTTCTTGAAAGGGTGAAGA+AGG 0.445400 3_3:+72710196 Msa0470580:CDS
TGCTAATGGCTGTGAAGAAT+GGG 0.452989 3_3:+72709998 Msa0470580:CDS
GACGAGGGCAGGGTGGGTAG+TGG 0.456030 3_3:-72711018 None:intergenic
GCCTTCAAATGCTCAAAGAT+GGG 0.458240 3_3:+72711119 Msa0470580:CDS
GGTTCCCATTATTAACAGAA+TGG 0.459749 3_3:-72711582 None:intergenic
TTCATCTGAGTTCTACAAGC+TGG 0.462965 3_3:+72710220 Msa0470580:CDS
GGCCTTCAAATGCTCAAAGA+TGG 0.469771 3_3:+72711118 Msa0470580:CDS
GGGTGGGTAGTGGCTGACCT+TGG 0.474958 3_3:-72711008 None:intergenic
AGGACTTATAGTGGCCTTCA+GGG 0.476831 3_3:-72711299 None:intergenic
TCAATGACTGGGACTGCCAT+TGG 0.479466 3_3:-72709927 None:intergenic
GATACAAGAGTTGTTGGCAC+AGG 0.480691 3_3:+72711221 Msa0470580:CDS
TGAAGAAAGGGCCAAAACTT+TGG 0.481879 3_3:+72709968 Msa0470580:CDS
TTCGGAGGAACTTCTTGAAA+GGG 0.484104 3_3:+72710187 Msa0470580:CDS
CAATGGCATTTGGCAAAGGT+TGG 0.485635 3_3:-72711156 None:intergenic
ATTGATTTCTCAAAGCTCAA+TGG 0.489703 3_3:+72709945 Msa0470580:CDS
GAAGGATGCAATTGATCTCC+TGG 0.489897 3_3:-72711266 None:intergenic
TCTTGTATCTGCCATTGCTC+AGG 0.490966 3_3:-72711207 None:intergenic
ATGGCAGATACAAGAGTTGT+TGG 0.491642 3_3:+72711215 Msa0470580:CDS
CTCCGAGCTCATACTGATGC+AGG 0.492527 3_3:+72711058 Msa0470580:CDS
AGCTTTGAGAAATCAATGAC+TGG 0.493921 3_3:-72709939 None:intergenic
TTGCTAATGGCTGTGAAGAA+TGG 0.495093 3_3:+72709997 Msa0470580:CDS
TTTCCTTTGTACCTGAAACT+TGG 0.497521 3_3:-72710386 None:intergenic
CAAAGCTCAATGGTGAAGAA+AGG 0.504049 3_3:+72709955 Msa0470580:CDS
AAAGCTCAATGGTGAAGAAA+GGG 0.519903 3_3:+72709956 Msa0470580:CDS
GAGAATCTGGGCTTACCAAA+AGG 0.520098 3_3:+72710932 Msa0470580:CDS
TTGTGGTGCAGGACTTATAG+TGG 0.522653 3_3:-72711308 None:intergenic
TTTCGGAGGAACTTCTTGAA+AGG 0.527105 3_3:+72710186 Msa0470580:CDS
GTGTTGATGACAATGGCATT+TGG 0.527344 3_3:-72711166 None:intergenic
TTTATCTTCAACTGTAATGG+TGG 0.528166 3_3:+72711648 Msa0470580:three_prime_UTR
GGGAAACCATGTCAGAATAT+CGG 0.531703 3_3:+72710864 Msa0470580:intron
AAGTCCTGCACCACAATTGG+CGG 0.531890 3_3:+72711315 Msa0470580:CDS
GTTCTACAAGCTGGAAAGAG+AGG 0.537375 3_3:+72710229 Msa0470580:CDS
GCTTTAACAGCTCTAAACCT+TGG 0.537516 3_3:-72711433 None:intergenic
TGACCGCTACAGAGGGTACC+AGG 0.540972 3_3:+72711248 Msa0470580:CDS
CTTCTATAACCCACCCCTGA+AGG 0.542974 3_3:+72711285 Msa0470580:CDS
TAGTCGCCGAAAACGAACTT+AGG 0.544748 3_3:-72711370 None:intergenic
AAATGCTCAAAGATGGGGAA+TGG 0.549631 3_3:+72711125 Msa0470580:CDS
CAATGCTTTCTTTGGCACCA+AGG 0.550393 3_3:+72710991 Msa0470580:CDS
TTATCTTCAACTGTAATGGT+GGG 0.561730 3_3:+72711649 Msa0470580:three_prime_UTR
CCTCGTCCAGAACTTGTGAA+TGG 0.565214 3_3:+72711034 Msa0470580:CDS
AAGGCTCTGAATGACGGAGA+AGG 0.567122 3_3:+72710965 Msa0470580:CDS
ACAAGTTCTGGACGAGGGCA+GGG 0.567547 3_3:-72711028 None:intergenic
GTTCTGGACGAGGGCAGGGT+GGG 0.570685 3_3:-72711024 None:intergenic
ATCAAGAAGGCTCTGAATGA+CGG 0.575249 3_3:+72710959 Msa0470580:CDS
ATGACAATGGCATTTGGCAA+AGG 0.578431 3_3:-72711160 None:intergenic
CTCCTGCATCAGTATGAGCT+CGG 0.578481 3_3:-72711060 None:intergenic
CTCAGACCGATATTCTGACA+TGG 0.582362 3_3:-72710870 None:intergenic
CTCTAAACCTTGGTTCCTTG+GGG 0.589759 3_3:-72711423 None:intergenic
TAAACCTTGGTTCCTTGGGG+AGG 0.596862 3_3:-72711420 None:intergenic
ACCAAAAGGATATATCAAGA+AGG 0.597384 3_3:+72710946 Msa0470580:CDS
CCATTCACAAGTTCTGGACG+AGG 0.602276 3_3:-72711034 None:intergenic
ATACAAGAGTTGTTGGCACA+GGG 0.603323 3_3:+72711222 Msa0470580:CDS
GATCAATCACGGCATTTCGG+AGG 0.604808 3_3:+72710172 Msa0470580:CDS
CAGATTGAAGTCCTGAGCAA+TGG 0.612775 3_3:+72711196 Msa0470580:CDS
CAGGGTTCTGACCGCTACAG+AGG 0.614431 3_3:+72711240 Msa0470580:CDS
GAGATTGTATGCATACATCT+GGG 0.614752 3_3:+72711671 Msa0470580:three_prime_UTR
CCTACTATTCCAAGATGACA+AGG 0.615698 3_3:+72711090 Msa0470580:CDS
GCTTTGAGAAATCAATGACT+GGG 0.616069 3_3:-72709938 None:intergenic
AGTTCCTCCCCAAGGAACCA+AGG 0.616119 3_3:+72711416 Msa0470580:CDS
GGACTTATAGTGGCCTTCAG+GGG 0.617092 3_3:-72711298 None:intergenic
AAAATTGGAGAATGTGGACT+GGG 0.618920 3_3:+72710316 Msa0470580:CDS
GTGTTACAGTTGATCAATCA+CGG 0.620618 3_3:+72710161 Msa0470580:intron
AATGCCATTGTCATCAACAC+TGG 0.623265 3_3:+72711169 Msa0470580:CDS
CCTTCAAATGCTCAAAGATG+GGG 0.631779 3_3:+72711120 Msa0470580:CDS
TTCCAAGATGACAAGGTAGG+TGG 0.632184 3_3:+72711097 Msa0470580:CDS
CTATTCCAAGATGACAAGGT+AGG 0.635329 3_3:+72711094 Msa0470580:CDS
AGTGAATCTCACAGAAGTGA+TGG 0.637610 3_3:+72710907 Msa0470580:CDS
AGTTCTGGACGAGGGCAGGG+TGG 0.638123 3_3:-72711025 None:intergenic
GAAGTGATGGATGAGAATCT+GGG 0.644527 3_3:+72710920 Msa0470580:CDS
GGTCTTTGTTCTGTAAGACA+TGG 0.647115 3_3:+72711529 Msa0470580:three_prime_UTR
AGGGTTCTGACCGCTACAGA+GGG 0.658519 3_3:+72711241 Msa0470580:CDS
TGAGCAGAAGTTCCTCCCCA+AGG 0.663194 3_3:+72711408 Msa0470580:CDS
ATTGGAGAATGTGGACTGGG+AGG 0.674613 3_3:+72710319 Msa0470580:CDS
GCTAATGGCTGTGAAGAATG+GGG 0.677827 3_3:+72709999 Msa0470580:CDS
CGAGCTCATACTGATGCAGG+AGG 0.690037 3_3:+72711061 Msa0470580:CDS
CAGTAGCAAAGAATACCACA+TGG 0.690411 3_3:+72711556 Msa0470580:three_prime_UTR
CATTCACAAGTTCTGGACGA+GGG 0.699192 3_3:-72711033 None:intergenic
TCTCCTGGTACCCTCTGTAG+CGG 0.702024 3_3:-72711251 None:intergenic
ATCACCAGTGTTGATGACAA+TGG 0.710934 3_3:-72711173 None:intergenic
CTAATGGCTGTGAAGAATGG+GGG 0.716690 3_3:+72710000 Msa0470580:CDS
TTAACAGAATGGCAACCATG+TGG 0.724914 3_3:-72711571 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTTATGTTTACAAATAA+TGG + chr3_3:72710041-72710060 Msa0470580:intron 15.0%
!!! TTCAAAATAACATCTAAAAT+TGG + chr3_3:72710696-72710715 Msa0470580:intron 15.0%
!! TCATTTATGTTTACAAATAA+TGG + chr3_3:72710041-72710060 Msa0470580:intron 15.0%
!!! TTCAAAATAACATCTAAAAT+TGG + chr3_3:72710696-72710715 Msa0470580:intron 15.0%
!! AGAAAAGTTAAGATAAGAAA+AGG - chr3_3:72709904-72709923 None:intergenic 20.0%
!! GTATAACTTAAAGAATATTG+TGG + chr3_3:72710548-72710567 Msa0470580:intron 20.0%
!!! TATTTTTTGGGTTAAGAAAA+TGG - chr3_3:72710632-72710651 None:intergenic 20.0%
!!! TTACTCTTGTTTACTAAAAT+AGG + chr3_3:72710669-72710688 Msa0470580:intron 20.0%
!!! TGAAACCAATATACTTTTAT+AGG + chr3_3:72710734-72710753 Msa0470580:intron 20.0%
!! CTTACTTTCATATATAAATC+TGG + chr3_3:72711471-72711490 Msa0470580:three_prime_UTR 20.0%
!! AGAAAAGTTAAGATAAGAAA+AGG - chr3_3:72709904-72709923 None:intergenic 20.0%
!! GTATAACTTAAAGAATATTG+TGG + chr3_3:72710548-72710567 Msa0470580:intron 20.0%
!!! TATTTTTTGGGTTAAGAAAA+TGG - chr3_3:72710632-72710651 None:intergenic 20.0%
!!! TTACTCTTGTTTACTAAAAT+AGG + chr3_3:72710669-72710688 Msa0470580:intron 20.0%
!!! TGAAACCAATATACTTTTAT+AGG + chr3_3:72710734-72710753 Msa0470580:intron 20.0%
!! CTTACTTTCATATATAAATC+TGG + chr3_3:72711471-72711490 Msa0470580:three_prime_UTR 20.0%
! ACATAAATGATTTAAGTACC+TGG - chr3_3:72710031-72710050 None:intergenic 25.0%
!! AAACATGAATGCAATTTTTG+TGG + chr3_3:72710094-72710113 Msa0470580:intron 25.0%
! CAAGAACAATAATTTCTTTC+TGG - chr3_3:72710529-72710548 None:intergenic 25.0%
!! CGAATCCTATAAAAGTATAT+TGG - chr3_3:72710742-72710761 None:intergenic 25.0%
!! TTAATAATGGGAACCATAAT+GGG + chr3_3:72711590-72711609 Msa0470580:three_prime_UTR 25.0%
! GAAAATACTAATACCCATTA+TGG - chr3_3:72711606-72711625 None:intergenic 25.0%
! ACATAAATGATTTAAGTACC+TGG - chr3_3:72710031-72710050 None:intergenic 25.0%
!! AAACATGAATGCAATTTTTG+TGG + chr3_3:72710094-72710113 Msa0470580:intron 25.0%
! CAAGAACAATAATTTCTTTC+TGG - chr3_3:72710529-72710548 None:intergenic 25.0%
!! CGAATCCTATAAAAGTATAT+TGG - chr3_3:72710742-72710761 None:intergenic 25.0%
!! TTAATAATGGGAACCATAAT+GGG + chr3_3:72711590-72711609 Msa0470580:three_prime_UTR 25.0%
! GAAAATACTAATACCCATTA+TGG - chr3_3:72711606-72711625 None:intergenic 25.0%
! TCTTAACTTTTCTGATCCAA+TGG + chr3_3:72709911-72709930 Msa0470580:exon 30.0%
! ATTGATTTCTCAAAGCTCAA+TGG + chr3_3:72709945-72709964 Msa0470580:CDS 30.0%
! TGAATGCAATTTTTGTGGTT+TGG + chr3_3:72710099-72710118 Msa0470580:intron 30.0%
AAAGAAGAGCAGTGAAAAAT+TGG + chr3_3:72710301-72710320 Msa0470580:CDS 30.0%
! ATGCTTGACTAACTTTTACT+TGG - chr3_3:72710425-72710444 None:intergenic 30.0%
ACCAAAAGGATATATCAAGA+AGG + chr3_3:72710946-72710965 Msa0470580:CDS 30.0%
! ACTTATCCTAAGTTCGTTTT+CGG + chr3_3:72711364-72711383 Msa0470580:CDS 30.0%
! AAGTAAGTGCTTTTCTCATA+TGG - chr3_3:72711458-72711477 None:intergenic 30.0%
!!! CGTCTTTTTATTTTGTTTGC+AGG + chr3_3:72711508-72711527 Msa0470580:three_prime_UTR 30.0%
GTTGCCATTCTGTTAATAAT+GGG + chr3_3:72711578-72711597 Msa0470580:three_prime_UTR 30.0%
! GTTAATAATGGGAACCATAA+TGG + chr3_3:72711589-72711608 Msa0470580:three_prime_UTR 30.0%
TGCTTTATCTTCAACTGTAA+TGG + chr3_3:72711645-72711664 Msa0470580:three_prime_UTR 30.0%
TTTATCTTCAACTGTAATGG+TGG + chr3_3:72711648-72711667 Msa0470580:three_prime_UTR 30.0%
TTATCTTCAACTGTAATGGT+GGG + chr3_3:72711649-72711668 Msa0470580:three_prime_UTR 30.0%
! TCTTAACTTTTCTGATCCAA+TGG + chr3_3:72709911-72709930 Msa0470580:exon 30.0%
! ATTGATTTCTCAAAGCTCAA+TGG + chr3_3:72709945-72709964 Msa0470580:CDS 30.0%
! TGAATGCAATTTTTGTGGTT+TGG + chr3_3:72710099-72710118 Msa0470580:intron 30.0%
AAAGAAGAGCAGTGAAAAAT+TGG + chr3_3:72710301-72710320 Msa0470580:CDS 30.0%
! ATGCTTGACTAACTTTTACT+TGG - chr3_3:72710425-72710444 None:intergenic 30.0%
ACCAAAAGGATATATCAAGA+AGG + chr3_3:72710946-72710965 Msa0470580:CDS 30.0%
! ACTTATCCTAAGTTCGTTTT+CGG + chr3_3:72711364-72711383 Msa0470580:CDS 30.0%
! AAGTAAGTGCTTTTCTCATA+TGG - chr3_3:72711458-72711477 None:intergenic 30.0%
!!! CGTCTTTTTATTTTGTTTGC+AGG + chr3_3:72711508-72711527 Msa0470580:three_prime_UTR 30.0%
GTTGCCATTCTGTTAATAAT+GGG + chr3_3:72711578-72711597 Msa0470580:three_prime_UTR 30.0%
! GTTAATAATGGGAACCATAA+TGG + chr3_3:72711589-72711608 Msa0470580:three_prime_UTR 30.0%
TGCTTTATCTTCAACTGTAA+TGG + chr3_3:72711645-72711664 Msa0470580:three_prime_UTR 30.0%
TTTATCTTCAACTGTAATGG+TGG + chr3_3:72711648-72711667 Msa0470580:three_prime_UTR 30.0%
TTATCTTCAACTGTAATGGT+GGG + chr3_3:72711649-72711668 Msa0470580:three_prime_UTR 30.0%
!! GCTTTGAGAAATCAATGACT+GGG - chr3_3:72709941-72709960 None:intergenic 35.0%
!! AGCTTTGAGAAATCAATGAC+TGG - chr3_3:72709942-72709961 None:intergenic 35.0%
AAAGCTCAATGGTGAAGAAA+GGG + chr3_3:72709956-72709975 Msa0470580:CDS 35.0%
GTGTTACAGTTGATCAATCA+CGG + chr3_3:72710161-72710180 Msa0470580:intron 35.0%
! ATTCAGAAGCTTCACTGTTT+TGG - chr3_3:72710270-72710289 None:intergenic 35.0%
CAGTGAAAAATTGGAGAATG+TGG + chr3_3:72710310-72710329 Msa0470580:CDS 35.0%
AAAAATTGGAGAATGTGGAC+TGG + chr3_3:72710315-72710334 Msa0470580:CDS 35.0%
AAAATTGGAGAATGTGGACT+GGG + chr3_3:72710316-72710335 Msa0470580:CDS 35.0%
!! CTCTTTTGGATGATAACGAA+TGG + chr3_3:72710351-72710370 Msa0470580:CDS 35.0%
!!! CTGAAACTTGGTGTATTTTC+TGG - chr3_3:72710377-72710396 None:intergenic 35.0%
CAGAAAATACACCAAGTTTC+AGG + chr3_3:72710375-72710394 Msa0470580:CDS 35.0%
TTTCCTTTGTACCTGAAACT+TGG - chr3_3:72710389-72710408 None:intergenic 35.0%
TCATCAGAATTCAAACTTCC+TGG + chr3_3:72710572-72710591 Msa0470580:intron 35.0%
TTATTATTTCCTCATTCGCC+AGG - chr3_3:72710593-72710612 None:intergenic 35.0%
AGTGATAACATGACATGACA+TGG + chr3_3:72710786-72710805 Msa0470580:intron 35.0%
ATGACATGACATGGCATAAT+AGG + chr3_3:72710795-72710814 Msa0470580:intron 35.0%
TGACTTCTCATATGAATGAC+AGG + chr3_3:72710843-72710862 Msa0470580:intron 35.0%
GACTTCTCATATGAATGACA+GGG + chr3_3:72710844-72710863 Msa0470580:intron 35.0%
! GCCTTCTTGATATATCCTTT+TGG - chr3_3:72710950-72710969 None:intergenic 35.0%
! TTATCTTTTTCCGCCAATTG+TGG - chr3_3:72711328-72711347 None:intergenic 35.0%
GGTTGCCATTCTGTTAATAA+TGG + chr3_3:72711577-72711596 Msa0470580:three_prime_UTR 35.0%
GGTTCCCATTATTAACAGAA+TGG - chr3_3:72711585-72711604 None:intergenic 35.0%
GAGATTGTATGCATACATCT+GGG + chr3_3:72711671-72711690 Msa0470580:three_prime_UTR 35.0%
!! GCTTTGAGAAATCAATGACT+GGG - chr3_3:72709941-72709960 None:intergenic 35.0%
!! AGCTTTGAGAAATCAATGAC+TGG - chr3_3:72709942-72709961 None:intergenic 35.0%
AAAGCTCAATGGTGAAGAAA+GGG + chr3_3:72709956-72709975 Msa0470580:CDS 35.0%
GTGTTACAGTTGATCAATCA+CGG + chr3_3:72710161-72710180 Msa0470580:intron 35.0%
! ATTCAGAAGCTTCACTGTTT+TGG - chr3_3:72710270-72710289 None:intergenic 35.0%
CAGTGAAAAATTGGAGAATG+TGG + chr3_3:72710310-72710329 Msa0470580:CDS 35.0%
AAAAATTGGAGAATGTGGAC+TGG + chr3_3:72710315-72710334 Msa0470580:CDS 35.0%
AAAATTGGAGAATGTGGACT+GGG + chr3_3:72710316-72710335 Msa0470580:CDS 35.0%
!! CTCTTTTGGATGATAACGAA+TGG + chr3_3:72710351-72710370 Msa0470580:CDS 35.0%
!!! CTGAAACTTGGTGTATTTTC+TGG - chr3_3:72710377-72710396 None:intergenic 35.0%
CAGAAAATACACCAAGTTTC+AGG + chr3_3:72710375-72710394 Msa0470580:CDS 35.0%
TTTCCTTTGTACCTGAAACT+TGG - chr3_3:72710389-72710408 None:intergenic 35.0%
TCATCAGAATTCAAACTTCC+TGG + chr3_3:72710572-72710591 Msa0470580:intron 35.0%
TTATTATTTCCTCATTCGCC+AGG - chr3_3:72710593-72710612 None:intergenic 35.0%
AGTGATAACATGACATGACA+TGG + chr3_3:72710786-72710805 Msa0470580:intron 35.0%
ATGACATGACATGGCATAAT+AGG + chr3_3:72710795-72710814 Msa0470580:intron 35.0%
TGACTTCTCATATGAATGAC+AGG + chr3_3:72710843-72710862 Msa0470580:intron 35.0%
GACTTCTCATATGAATGACA+GGG + chr3_3:72710844-72710863 Msa0470580:intron 35.0%
! GCCTTCTTGATATATCCTTT+TGG - chr3_3:72710950-72710969 None:intergenic 35.0%
! TTATCTTTTTCCGCCAATTG+TGG - chr3_3:72711328-72711347 None:intergenic 35.0%
GGTTGCCATTCTGTTAATAA+TGG + chr3_3:72711577-72711596 Msa0470580:three_prime_UTR 35.0%
GGTTCCCATTATTAACAGAA+TGG - chr3_3:72711585-72711604 None:intergenic 35.0%
GAGATTGTATGCATACATCT+GGG + chr3_3:72711671-72711690 Msa0470580:three_prime_UTR 35.0%
CAAAGCTCAATGGTGAAGAA+AGG + chr3_3:72709955-72709974 Msa0470580:CDS 40.0%
TGAAGAAAGGGCCAAAACTT+TGG + chr3_3:72709968-72709987 Msa0470580:CDS 40.0%
! AGCAATCTGTGCCAAAGTTT+TGG - chr3_3:72709982-72710001 None:intergenic 40.0%
ACTTTGGCACAGATTGCTAA+TGG + chr3_3:72709984-72710003 Msa0470580:CDS 40.0%
TTGCTAATGGCTGTGAAGAA+TGG + chr3_3:72709997-72710016 Msa0470580:CDS 40.0%
TGCTAATGGCTGTGAAGAAT+GGG + chr3_3:72709998-72710017 Msa0470580:CDS 40.0%
GTTGATCAATCACGGCATTT+CGG + chr3_3:72710169-72710188 Msa0470580:intron 40.0%
TTTCGGAGGAACTTCTTGAA+AGG + chr3_3:72710186-72710205 Msa0470580:CDS 40.0%
TTCGGAGGAACTTCTTGAAA+GGG + chr3_3:72710187-72710206 Msa0470580:CDS 40.0%
ACTTCTTGAAAGGGTGAAGA+AGG + chr3_3:72710196-72710215 Msa0470580:CDS 40.0%
TTCATCTGAGTTCTACAAGC+TGG + chr3_3:72710220-72710239 Msa0470580:CDS 40.0%
! GGAGGATGTTATCACTCTTT+TGG + chr3_3:72710337-72710356 Msa0470580:CDS 40.0%
! ACACCAAGTTTCAGGTACAA+AGG + chr3_3:72710383-72710402 Msa0470580:intron 40.0%
GGGAAACCATGTCAGAATAT+CGG + chr3_3:72710864-72710883 Msa0470580:intron 40.0%
TCGGTCTGAGTTAAAGAAAC+TGG + chr3_3:72710883-72710902 Msa0470580:CDS 40.0%
AGTGAATCTCACAGAAGTGA+TGG + chr3_3:72710907-72710926 Msa0470580:CDS 40.0%
!! AGAAGTGATGGATGAGAATC+TGG + chr3_3:72710919-72710938 Msa0470580:CDS 40.0%
!! GAAGTGATGGATGAGAATCT+GGG + chr3_3:72710920-72710939 Msa0470580:CDS 40.0%
!! ATCAAGAAGGCTCTGAATGA+CGG + chr3_3:72710959-72710978 Msa0470580:CDS 40.0%
GAAGGAGACAATGCTTTCTT+TGG + chr3_3:72710983-72711002 Msa0470580:CDS 40.0%
CCTTGTCATCTTGGAATAGT+AGG - chr3_3:72711093-72711112 None:intergenic 40.0%
CCTACTATTCCAAGATGACA+AGG + chr3_3:72711090-72711109 Msa0470580:CDS 40.0%
CTATTCCAAGATGACAAGGT+AGG + chr3_3:72711094-72711113 Msa0470580:CDS 40.0%
GCCTTCAAATGCTCAAAGAT+GGG + chr3_3:72711119-72711138 Msa0470580:CDS 40.0%
CCTTCAAATGCTCAAAGATG+GGG + chr3_3:72711120-72711139 Msa0470580:CDS 40.0%
AAATGCTCAAAGATGGGGAA+TGG + chr3_3:72711125-72711144 Msa0470580:CDS 40.0%
ATGACAATGGCATTTGGCAA+AGG - chr3_3:72711163-72711182 None:intergenic 40.0%
!! GTGTTGATGACAATGGCATT+TGG - chr3_3:72711169-72711188 None:intergenic 40.0%
AATGCCATTGTCATCAACAC+TGG + chr3_3:72711169-72711188 Msa0470580:CDS 40.0%
!! ATCACCAGTGTTGATGACAA+TGG - chr3_3:72711176-72711195 None:intergenic 40.0%
ATGGCAGATACAAGAGTTGT+TGG + chr3_3:72711215-72711234 Msa0470580:CDS 40.0%
ATACAAGAGTTGTTGGCACA+GGG + chr3_3:72711222-72711241 Msa0470580:CDS 40.0%
TATAAGTCCTGCACCACAAT+TGG + chr3_3:72711312-72711331 Msa0470580:CDS 40.0%
!! GATAAGTGTCATCGACTTGT+TGG - chr3_3:72711351-72711370 None:intergenic 40.0%
!! GCTTTAACAGCTCTAAACCT+TGG - chr3_3:72711436-72711455 None:intergenic 40.0%
GGTCTTTGTTCTGTAAGACA+TGG + chr3_3:72711529-72711548 Msa0470580:three_prime_UTR 40.0%
CAGTAGCAAAGAATACCACA+TGG + chr3_3:72711556-72711575 Msa0470580:three_prime_UTR 40.0%
TTAACAGAATGGCAACCATG+TGG - chr3_3:72711574-72711593 None:intergenic 40.0%
GGAGATTGTATGCATACATC+TGG + chr3_3:72711670-72711689 Msa0470580:three_prime_UTR 40.0%
CAAAGCTCAATGGTGAAGAA+AGG + chr3_3:72709955-72709974 Msa0470580:CDS 40.0%
TGAAGAAAGGGCCAAAACTT+TGG + chr3_3:72709968-72709987 Msa0470580:CDS 40.0%
! AGCAATCTGTGCCAAAGTTT+TGG - chr3_3:72709982-72710001 None:intergenic 40.0%
ACTTTGGCACAGATTGCTAA+TGG + chr3_3:72709984-72710003 Msa0470580:CDS 40.0%
TTGCTAATGGCTGTGAAGAA+TGG + chr3_3:72709997-72710016 Msa0470580:CDS 40.0%
TGCTAATGGCTGTGAAGAAT+GGG + chr3_3:72709998-72710017 Msa0470580:CDS 40.0%
GTTGATCAATCACGGCATTT+CGG + chr3_3:72710169-72710188 Msa0470580:intron 40.0%
TTTCGGAGGAACTTCTTGAA+AGG + chr3_3:72710186-72710205 Msa0470580:CDS 40.0%
TTCGGAGGAACTTCTTGAAA+GGG + chr3_3:72710187-72710206 Msa0470580:CDS 40.0%
ACTTCTTGAAAGGGTGAAGA+AGG + chr3_3:72710196-72710215 Msa0470580:CDS 40.0%
TTCATCTGAGTTCTACAAGC+TGG + chr3_3:72710220-72710239 Msa0470580:CDS 40.0%
! GGAGGATGTTATCACTCTTT+TGG + chr3_3:72710337-72710356 Msa0470580:CDS 40.0%
! ACACCAAGTTTCAGGTACAA+AGG + chr3_3:72710383-72710402 Msa0470580:intron 40.0%
GGGAAACCATGTCAGAATAT+CGG + chr3_3:72710864-72710883 Msa0470580:intron 40.0%
TCGGTCTGAGTTAAAGAAAC+TGG + chr3_3:72710883-72710902 Msa0470580:CDS 40.0%
AGTGAATCTCACAGAAGTGA+TGG + chr3_3:72710907-72710926 Msa0470580:CDS 40.0%
!! AGAAGTGATGGATGAGAATC+TGG + chr3_3:72710919-72710938 Msa0470580:CDS 40.0%
!! GAAGTGATGGATGAGAATCT+GGG + chr3_3:72710920-72710939 Msa0470580:CDS 40.0%
!! ATCAAGAAGGCTCTGAATGA+CGG + chr3_3:72710959-72710978 Msa0470580:CDS 40.0%
GAAGGAGACAATGCTTTCTT+TGG + chr3_3:72710983-72711002 Msa0470580:CDS 40.0%
CCTTGTCATCTTGGAATAGT+AGG - chr3_3:72711093-72711112 None:intergenic 40.0%
CCTACTATTCCAAGATGACA+AGG + chr3_3:72711090-72711109 Msa0470580:CDS 40.0%
CTATTCCAAGATGACAAGGT+AGG + chr3_3:72711094-72711113 Msa0470580:CDS 40.0%
GCCTTCAAATGCTCAAAGAT+GGG + chr3_3:72711119-72711138 Msa0470580:CDS 40.0%
CCTTCAAATGCTCAAAGATG+GGG + chr3_3:72711120-72711139 Msa0470580:CDS 40.0%
AAATGCTCAAAGATGGGGAA+TGG + chr3_3:72711125-72711144 Msa0470580:CDS 40.0%
ATGACAATGGCATTTGGCAA+AGG - chr3_3:72711163-72711182 None:intergenic 40.0%
!! GTGTTGATGACAATGGCATT+TGG - chr3_3:72711169-72711188 None:intergenic 40.0%
AATGCCATTGTCATCAACAC+TGG + chr3_3:72711169-72711188 Msa0470580:CDS 40.0%
!! ATCACCAGTGTTGATGACAA+TGG - chr3_3:72711176-72711195 None:intergenic 40.0%
ATGGCAGATACAAGAGTTGT+TGG + chr3_3:72711215-72711234 Msa0470580:CDS 40.0%
ATACAAGAGTTGTTGGCACA+GGG + chr3_3:72711222-72711241 Msa0470580:CDS 40.0%
TATAAGTCCTGCACCACAAT+TGG + chr3_3:72711312-72711331 Msa0470580:CDS 40.0%
!! GATAAGTGTCATCGACTTGT+TGG - chr3_3:72711351-72711370 None:intergenic 40.0%
!! GCTTTAACAGCTCTAAACCT+TGG - chr3_3:72711436-72711455 None:intergenic 40.0%
GGTCTTTGTTCTGTAAGACA+TGG + chr3_3:72711529-72711548 Msa0470580:three_prime_UTR 40.0%
CAGTAGCAAAGAATACCACA+TGG + chr3_3:72711556-72711575 Msa0470580:three_prime_UTR 40.0%
TTAACAGAATGGCAACCATG+TGG - chr3_3:72711574-72711593 None:intergenic 40.0%
GGAGATTGTATGCATACATC+TGG + chr3_3:72711670-72711689 Msa0470580:three_prime_UTR 40.0%
GCTAATGGCTGTGAAGAATG+GGG + chr3_3:72709999-72710018 Msa0470580:CDS 45.0%
CTAATGGCTGTGAAGAATGG+GGG + chr3_3:72710000-72710019 Msa0470580:CDS 45.0%
GTTCTACAAGCTGGAAAGAG+AGG + chr3_3:72710229-72710248 Msa0470580:CDS 45.0%
AGTATGCATGAGATGACAGG+TGG - chr3_3:72710467-72710486 None:intergenic 45.0%
! GAGAGTATGCATGAGATGAC+AGG - chr3_3:72710470-72710489 None:intergenic 45.0%
TTCAAACTTCCTGGCGAATG+AGG + chr3_3:72710581-72710600 Msa0470580:intron 45.0%
CTCAGACCGATATTCTGACA+TGG - chr3_3:72710873-72710892 None:intergenic 45.0%
GAGAATCTGGGCTTACCAAA+AGG + chr3_3:72710932-72710951 Msa0470580:CDS 45.0%
CAATGCTTTCTTTGGCACCA+AGG + chr3_3:72710991-72711010 Msa0470580:CDS 45.0%
!! CATTCACAAGTTCTGGACGA+GGG - chr3_3:72711036-72711055 None:intergenic 45.0%
TTCCAAGATGACAAGGTAGG+TGG + chr3_3:72711097-72711116 Msa0470580:CDS 45.0%
GGCCTTCAAATGCTCAAAGA+TGG + chr3_3:72711118-72711137 Msa0470580:CDS 45.0%
CCCCATCTTTGAGCATTTGA+AGG - chr3_3:72711123-72711142 None:intergenic 45.0%
CAATGGCATTTGGCAAAGGT+TGG - chr3_3:72711159-72711178 None:intergenic 45.0%
CAGATTGAAGTCCTGAGCAA+TGG + chr3_3:72711196-72711215 Msa0470580:CDS 45.0%
TCTTGTATCTGCCATTGCTC+AGG - chr3_3:72711210-72711229 None:intergenic 45.0%
GATACAAGAGTTGTTGGCAC+AGG + chr3_3:72711221-72711240 Msa0470580:CDS 45.0%
GAAGGATGCAATTGATCTCC+TGG - chr3_3:72711269-72711288 None:intergenic 45.0%
AGGACTTATAGTGGCCTTCA+GGG - chr3_3:72711302-72711321 None:intergenic 45.0%
TTGTGGTGCAGGACTTATAG+TGG - chr3_3:72711311-72711330 None:intergenic 45.0%
TAGTCGCCGAAAACGAACTT+AGG - chr3_3:72711373-72711392 None:intergenic 45.0%
CTCTAAACCTTGGTTCCTTG+GGG - chr3_3:72711426-72711445 None:intergenic 45.0%
! GCTCTAAACCTTGGTTCCTT+GGG - chr3_3:72711427-72711446 None:intergenic 45.0%
!! AGCTCTAAACCTTGGTTCCT+TGG - chr3_3:72711428-72711447 None:intergenic 45.0%
GCTAATGGCTGTGAAGAATG+GGG + chr3_3:72709999-72710018 Msa0470580:CDS 45.0%
CTAATGGCTGTGAAGAATGG+GGG + chr3_3:72710000-72710019 Msa0470580:CDS 45.0%
GTTCTACAAGCTGGAAAGAG+AGG + chr3_3:72710229-72710248 Msa0470580:CDS 45.0%
AGTATGCATGAGATGACAGG+TGG - chr3_3:72710467-72710486 None:intergenic 45.0%
! GAGAGTATGCATGAGATGAC+AGG - chr3_3:72710470-72710489 None:intergenic 45.0%
TTCAAACTTCCTGGCGAATG+AGG + chr3_3:72710581-72710600 Msa0470580:intron 45.0%
CTCAGACCGATATTCTGACA+TGG - chr3_3:72710873-72710892 None:intergenic 45.0%
GAGAATCTGGGCTTACCAAA+AGG + chr3_3:72710932-72710951 Msa0470580:CDS 45.0%
CAATGCTTTCTTTGGCACCA+AGG + chr3_3:72710991-72711010 Msa0470580:CDS 45.0%
!! CATTCACAAGTTCTGGACGA+GGG - chr3_3:72711036-72711055 None:intergenic 45.0%
TTCCAAGATGACAAGGTAGG+TGG + chr3_3:72711097-72711116 Msa0470580:CDS 45.0%
GGCCTTCAAATGCTCAAAGA+TGG + chr3_3:72711118-72711137 Msa0470580:CDS 45.0%
CCCCATCTTTGAGCATTTGA+AGG - chr3_3:72711123-72711142 None:intergenic 45.0%
CAATGGCATTTGGCAAAGGT+TGG - chr3_3:72711159-72711178 None:intergenic 45.0%
CAGATTGAAGTCCTGAGCAA+TGG + chr3_3:72711196-72711215 Msa0470580:CDS 45.0%
TCTTGTATCTGCCATTGCTC+AGG - chr3_3:72711210-72711229 None:intergenic 45.0%
GATACAAGAGTTGTTGGCAC+AGG + chr3_3:72711221-72711240 Msa0470580:CDS 45.0%
GAAGGATGCAATTGATCTCC+TGG - chr3_3:72711269-72711288 None:intergenic 45.0%
AGGACTTATAGTGGCCTTCA+GGG - chr3_3:72711302-72711321 None:intergenic 45.0%
TTGTGGTGCAGGACTTATAG+TGG - chr3_3:72711311-72711330 None:intergenic 45.0%
TAGTCGCCGAAAACGAACTT+AGG - chr3_3:72711373-72711392 None:intergenic 45.0%
CTCTAAACCTTGGTTCCTTG+GGG - chr3_3:72711426-72711445 None:intergenic 45.0%
! GCTCTAAACCTTGGTTCCTT+GGG - chr3_3:72711427-72711446 None:intergenic 45.0%
!! AGCTCTAAACCTTGGTTCCT+TGG - chr3_3:72711428-72711447 None:intergenic 45.0%
!!! CTTAATTATTATTATTTTTT+GGG - chr3_3:72710644-72710663 None:intergenic 5.0%
!!! ACTTAATTATTATTATTTTT+TGG - chr3_3:72710645-72710664 None:intergenic 5.0%
!!! CTTAATTATTATTATTTTTT+GGG - chr3_3:72710644-72710663 None:intergenic 5.0%
!!! ACTTAATTATTATTATTTTT+TGG - chr3_3:72710645-72710664 None:intergenic 5.0%
TCAATGACTGGGACTGCCAT+TGG - chr3_3:72709930-72709949 None:intergenic 50.0%
TGAAGAATGGGGGTTCTTCC+AGG + chr3_3:72710010-72710029 Msa0470580:CDS 50.0%
GATCAATCACGGCATTTCGG+AGG + chr3_3:72710172-72710191 Msa0470580:CDS 50.0%
!! ATTGGAGAATGTGGACTGGG+AGG + chr3_3:72710319-72710338 Msa0470580:CDS 50.0%
!! AAGGCTCTGAATGACGGAGA+AGG + chr3_3:72710965-72710984 Msa0470580:CDS 50.0%
!! CCATTCACAAGTTCTGGACG+AGG - chr3_3:72711037-72711056 None:intergenic 50.0%
CCTCGTCCAGAACTTGTGAA+TGG + chr3_3:72711034-72711053 Msa0470580:CDS 50.0%
CGGAGACCATTCACAAGTTC+TGG - chr3_3:72711043-72711062 None:intergenic 50.0%
CTCCTGCATCAGTATGAGCT+CGG - chr3_3:72711063-72711082 None:intergenic 50.0%
!! CTTCAGGGGTGGGTTATAGA+AGG - chr3_3:72711287-72711306 None:intergenic 50.0%
CTTCTATAACCCACCCCTGA+AGG + chr3_3:72711285-72711304 Msa0470580:CDS 50.0%
TTATAGTGGCCTTCAGGGGT+GGG - chr3_3:72711297-72711316 None:intergenic 50.0%
GGACTTATAGTGGCCTTCAG+GGG - chr3_3:72711301-72711320 None:intergenic 50.0%
CAGGACTTATAGTGGCCTTC+AGG - chr3_3:72711303-72711322 None:intergenic 50.0%
AAGTCCTGCACCACAATTGG+CGG + chr3_3:72711315-72711334 Msa0470580:CDS 50.0%
! TTTTCCGCCAATTGTGGTGC+AGG - chr3_3:72711322-72711341 None:intergenic 50.0%
TAAACCTTGGTTCCTTGGGG+AGG - chr3_3:72711423-72711442 None:intergenic 50.0%
TCAATGACTGGGACTGCCAT+TGG - chr3_3:72709930-72709949 None:intergenic 50.0%
TGAAGAATGGGGGTTCTTCC+AGG + chr3_3:72710010-72710029 Msa0470580:CDS 50.0%
GATCAATCACGGCATTTCGG+AGG + chr3_3:72710172-72710191 Msa0470580:CDS 50.0%
!! ATTGGAGAATGTGGACTGGG+AGG + chr3_3:72710319-72710338 Msa0470580:CDS 50.0%
!! AAGGCTCTGAATGACGGAGA+AGG + chr3_3:72710965-72710984 Msa0470580:CDS 50.0%
!! CCATTCACAAGTTCTGGACG+AGG - chr3_3:72711037-72711056 None:intergenic 50.0%
CCTCGTCCAGAACTTGTGAA+TGG + chr3_3:72711034-72711053 Msa0470580:CDS 50.0%
CGGAGACCATTCACAAGTTC+TGG - chr3_3:72711043-72711062 None:intergenic 50.0%
CTCCTGCATCAGTATGAGCT+CGG - chr3_3:72711063-72711082 None:intergenic 50.0%
!! CTTCAGGGGTGGGTTATAGA+AGG - chr3_3:72711287-72711306 None:intergenic 50.0%
CTTCTATAACCCACCCCTGA+AGG + chr3_3:72711285-72711304 Msa0470580:CDS 50.0%
TTATAGTGGCCTTCAGGGGT+GGG - chr3_3:72711297-72711316 None:intergenic 50.0%
GGACTTATAGTGGCCTTCAG+GGG - chr3_3:72711301-72711320 None:intergenic 50.0%
CAGGACTTATAGTGGCCTTC+AGG - chr3_3:72711303-72711322 None:intergenic 50.0%
AAGTCCTGCACCACAATTGG+CGG + chr3_3:72711315-72711334 Msa0470580:CDS 50.0%
! TTTTCCGCCAATTGTGGTGC+AGG - chr3_3:72711322-72711341 None:intergenic 50.0%
TAAACCTTGGTTCCTTGGGG+AGG - chr3_3:72711423-72711442 None:intergenic 50.0%
!! ACAAGTTCTGGACGAGGGCA+GGG - chr3_3:72711031-72711050 None:intergenic 55.0%
CTCCGAGCTCATACTGATGC+AGG + chr3_3:72711058-72711077 Msa0470580:CDS 55.0%
CGAGCTCATACTGATGCAGG+AGG + chr3_3:72711061-72711080 Msa0470580:CDS 55.0%
GGCCACCTACCTTGTCATCT+TGG - chr3_3:72711102-72711121 None:intergenic 55.0%
! AGGGTTCTGACCGCTACAGA+GGG + chr3_3:72711241-72711260 Msa0470580:CDS 55.0%
TCTCCTGGTACCCTCTGTAG+CGG - chr3_3:72711254-72711273 None:intergenic 55.0%
CTTATAGTGGCCTTCAGGGG+TGG - chr3_3:72711298-72711317 None:intergenic 55.0%
TGAGCAGAAGTTCCTCCCCA+AGG + chr3_3:72711408-72711427 Msa0470580:CDS 55.0%
AGTTCCTCCCCAAGGAACCA+AGG + chr3_3:72711416-72711435 Msa0470580:CDS 55.0%
!! ACAAGTTCTGGACGAGGGCA+GGG - chr3_3:72711031-72711050 None:intergenic 55.0%
CTCCGAGCTCATACTGATGC+AGG + chr3_3:72711058-72711077 Msa0470580:CDS 55.0%
CGAGCTCATACTGATGCAGG+AGG + chr3_3:72711061-72711080 Msa0470580:CDS 55.0%
GGCCACCTACCTTGTCATCT+TGG - chr3_3:72711102-72711121 None:intergenic 55.0%
! AGGGTTCTGACCGCTACAGA+GGG + chr3_3:72711241-72711260 Msa0470580:CDS 55.0%
TCTCCTGGTACCCTCTGTAG+CGG - chr3_3:72711254-72711273 None:intergenic 55.0%
CTTATAGTGGCCTTCAGGGG+TGG - chr3_3:72711298-72711317 None:intergenic 55.0%
TGAGCAGAAGTTCCTCCCCA+AGG + chr3_3:72711408-72711427 Msa0470580:CDS 55.0%
AGTTCCTCCCCAAGGAACCA+AGG + chr3_3:72711416-72711435 Msa0470580:CDS 55.0%
!! CACAAGTTCTGGACGAGGGC+AGG - chr3_3:72711032-72711051 None:intergenic 60.0%
! CAGGGTTCTGACCGCTACAG+AGG + chr3_3:72711240-72711259 Msa0470580:CDS 60.0%
!! TGACCGCTACAGAGGGTACC+AGG + chr3_3:72711248-72711267 Msa0470580:CDS 60.0%
!! CACAAGTTCTGGACGAGGGC+AGG - chr3_3:72711032-72711051 None:intergenic 60.0%
! CAGGGTTCTGACCGCTACAG+AGG + chr3_3:72711240-72711259 Msa0470580:CDS 60.0%
!! TGACCGCTACAGAGGGTACC+AGG + chr3_3:72711248-72711267 Msa0470580:CDS 60.0%
! GGGTGGGTAGTGGCTGACCT+TGG - chr3_3:72711011-72711030 None:intergenic 65.0%
! GTTCTGGACGAGGGCAGGGT+GGG - chr3_3:72711027-72711046 None:intergenic 65.0%
!! AGTTCTGGACGAGGGCAGGG+TGG - chr3_3:72711028-72711047 None:intergenic 65.0%
! GGGTGGGTAGTGGCTGACCT+TGG - chr3_3:72711011-72711030 None:intergenic 65.0%
! GTTCTGGACGAGGGCAGGGT+GGG - chr3_3:72711027-72711046 None:intergenic 65.0%
!! AGTTCTGGACGAGGGCAGGG+TGG - chr3_3:72711028-72711047 None:intergenic 65.0%
GACGAGGGCAGGGTGGGTAG+TGG - chr3_3:72711021-72711040 None:intergenic 70.0%
GACGAGGGCAGGGTGGGTAG+TGG - chr3_3:72711021-72711040 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 72709881 72711748 72709881 ID=Msa0470580;Name=Msa0470580
chr3_3 mRNA 72709881 72711748 72709881 ID=Msa0470580-mRNA-1;Parent=Msa0470580;Name=Msa0470580-mRNA-1;_AED=0.05;_eAED=0.05;_QI=49|1|1|1|1|1|3|286|308
chr3_3 exon 72709881 72710031 72709881 ID=Msa0470580-mRNA-1:exon:18241;Parent=Msa0470580-mRNA-1
chr3_3 exon 72710170 72710396 72710170 ID=Msa0470580-mRNA-1:exon:18242;Parent=Msa0470580-mRNA-1
chr3_3 exon 72710865 72711748 72710865 ID=Msa0470580-mRNA-1:exon:18243;Parent=Msa0470580-mRNA-1
chr3_3 five_prime_UTR 72709881 72709929 72709881 ID=Msa0470580-mRNA-1:five_prime_utr;Parent=Msa0470580-mRNA-1
chr3_3 CDS 72709930 72710031 72709930 ID=Msa0470580-mRNA-1:cds;Parent=Msa0470580-mRNA-1
chr3_3 CDS 72710170 72710396 72710170 ID=Msa0470580-mRNA-1:cds;Parent=Msa0470580-mRNA-1
chr3_3 CDS 72710865 72711462 72710865 ID=Msa0470580-mRNA-1:cds;Parent=Msa0470580-mRNA-1
chr3_3 three_prime_UTR 72711463 72711748 72711463 ID=Msa0470580-mRNA-1:three_prime_utr;Parent=Msa0470580-mRNA-1
Gene Sequence

>Msa0470580

ATGGCAGTCCCAGTCATTGATTTCTCAAAGCTCAATGGTGAAGAAAGGGCCAAAACTTTGGCACAGATTGCTAATGGCTGTGAAGAATGGGGGTTCTTCCAGTTGATCAATCACGGCATTTCGGAGGAACTTCTTGAAAGGGTGAAGAAGGTTTCATCTGAGTTCTACAAGCTGGAAAGAGAGGAGAATTTCAAAAACTCCAAAACAGTGAAGCTTCTGAATGATATAGCTGAAAAGAAGAGCAGTGAAAAATTGGAGAATGTGGACTGGGAGGATGTTATCACTCTTTTGGATGATAACGAATGGCCAGAAAATACACCAAGTTTCAGGGAAACCATGTCAGAATATCGGTCTGAGTTAAAGAAACTGGCAGTGAATCTCACAGAAGTGATGGATGAGAATCTGGGCTTACCAAAAGGATATATCAAGAAGGCTCTGAATGACGGAGAAGGAGACAATGCTTTCTTTGGCACCAAGGTCAGCCACTACCCACCCTGCCCTCGTCCAGAACTTGTGAATGGTCTCCGAGCTCATACTGATGCAGGAGGTGTCATCCTACTATTCCAAGATGACAAGGTAGGTGGCCTTCAAATGCTCAAAGATGGGGAATGGCTTGATGTCCAACCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAAGTCCTGAGCAATGGCAGATACAAGAGTTGTTGGCACAGGGTTCTGACCGCTACAGAGGGTACCAGGAGATCAATTGCATCCTTCTATAACCCACCCCTGAAGGCCACTATAAGTCCTGCACCACAATTGGCGGAAAAAGATAACCAACAAGTCGATGACACTTATCCTAAGTTCGTTTTCGGCGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTCCCCAAGGAACCAAGGTTTAGAGCTGTTAAAGCCATATGA

Protein sequence

>Msa0470580

MAVPVIDFSKLNGEERAKTLAQIANGCEEWGFFQLINHGISEELLERVKKVSSEFYKLEREENFKNSKTVKLLNDIAEKKSSEKLENVDWEDVITLLDDNEWPENTPSFRETMSEYRSELKKLAVNLTEVMDENLGLPKGYIKKALNDGEGDNAFFGTKVSHYPPCPRPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWLDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLTATEGTRRSIASFYNPPLKATISPAPQLAEKDNQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVKAI*