AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515760 MtrunA17_Chr3g0125201 99.026 308 3 0 1 308 1 308 0.0 631
Msa0515760 MtrunA17_Chr5g0439011 49.518 311 145 3 1 306 3 306 2.01e-107 315
Msa0515760 MtrunA17_Chr3g0121141 50.649 308 136 4 4 306 5 301 1.00e-106 313
Msa0515760 MtrunA17_Chr2g0289341 50.163 307 139 4 4 305 5 302 4.10e-105 309
Msa0515760 MtrunA17_Chr6g0488511 47.003 317 137 6 1 306 1 297 8.60e-91 272
Msa0515760 MtrunA17_Chr3g0128001 41.137 299 150 9 3 290 38 321 3.22e-70 221
Msa0515760 MtrunA17_Chr8g0345831 41.554 296 149 9 2 286 41 323 9.57e-69 217
Msa0515760 MtrunA17_Chr4g0075471 66.906 139 45 1 153 291 22 159 1.70e-64 200
Msa0515760 MtrunA17_Chr5g0437181 37.075 294 169 4 3 286 49 336 3.05e-64 206
Msa0515760 MtrunA17_Chr4g0006371 38.462 299 163 7 1 286 60 350 5.01e-64 206
Msa0515760 MtrunA17_Chr7g0242551 38.047 297 163 7 3 286 54 342 1.38e-62 202
Msa0515760 MtrunA17_Chr8g0375671 38.989 277 154 5 1 267 50 321 1.43e-61 199
Msa0515760 MtrunA17_Chr8g0375601 36.129 310 171 7 3 298 48 344 2.03e-60 197
Msa0515760 MtrunA17_Chr3g0113641 35.811 296 170 6 3 286 50 337 2.48e-60 196
Msa0515760 MtrunA17_Chr3g0109041 36.721 305 168 7 2 290 41 336 9.33e-60 194
Msa0515760 MtrunA17_Chr8g0375571 35.231 281 161 4 3 270 45 317 1.57e-57 189
Msa0515760 MtrunA17_Chr5g0421011 35.667 300 177 5 3 295 47 337 7.04e-57 187
Msa0515760 MtrunA17_Chr5g0426891 35.932 295 173 9 3 289 39 325 7.36e-57 187
Msa0515760 MtrunA17_Chr7g0239111 35.473 296 167 7 3 287 55 337 1.31e-56 186
Msa0515760 MtrunA17_Chr1g0162191 38.828 273 154 5 3 267 47 314 1.29e-55 184
Msa0515760 MtrunA17_Chr8g0365241 35.793 271 162 2 3 266 57 322 1.48e-55 184
Msa0515760 MtrunA17_Chr5g0420981 34.304 309 190 4 3 303 53 356 5.41e-55 182
Msa0515760 MtrunA17_Chr7g0265221 34.228 298 179 5 1 282 65 361 7.79e-55 182
Msa0515760 MtrunA17_Chr5g0412681 35.548 301 160 10 2 287 32 313 1.35e-54 181
Msa0515760 MtrunA17_Chr5g0420951 34.767 279 170 2 3 274 53 326 4.08e-54 180
Msa0515760 MtrunA17_Chr5g0423221 34.000 300 183 5 3 295 71 362 6.34e-54 180
Msa0515760 MtrunA17_Chr1g0179801 35.915 284 163 5 1 271 64 341 9.11e-54 179
Msa0515760 MtrunA17_Chr6g0455481 34.921 315 175 10 2 305 41 336 1.12e-53 178
Msa0515760 MtrunA17_Chr7g0239101 33.555 301 182 5 3 295 55 345 2.96e-53 177
Msa0515760 MtrunA17_Chr5g0423191 33.333 300 184 4 3 295 47 337 5.59e-53 177
Msa0515760 MtrunA17_Chr7g0239821 34.247 292 176 4 3 287 64 346 7.38e-53 177
Msa0515760 MtrunA17_Chr4g0045411 33.750 320 174 9 2 296 29 335 7.50e-53 176
Msa0515760 MtrunA17_Chr5g0412651 34.568 324 177 10 2 308 37 342 3.60e-52 174
Msa0515760 MtrunA17_Chr7g0220001 32.500 320 173 8 2 304 40 333 3.69e-52 174
Msa0515760 MtrunA17_Chr5g0421041 36.496 274 161 4 1 267 43 310 9.98e-52 174
Msa0515760 MtrunA17_Chr5g0423251 35.636 275 158 5 3 267 47 312 1.08e-51 174
Msa0515760 MtrunA17_Chr2g0314381 33.564 289 173 5 1 281 75 352 2.53e-51 173
Msa0515760 MtrunA17_Chr7g0239121 34.343 297 170 8 3 287 51 334 2.56e-51 173
Msa0515760 MtrunA17_Chr3g0126741 35.870 276 166 6 2 270 58 329 2.71e-51 173
Msa0515760 MtrunA17_Chr8g0375701 34.014 294 175 5 2 283 54 340 3.18e-51 172
Msa0515760 MtrunA17_Chr2g0314401 33.692 279 172 4 1 271 49 322 3.46e-51 172
Msa0515760 MtrunA17_Chr5g0423201 34.323 303 178 6 3 295 47 338 4.38e-51 172
Msa0515760 MtrunA17_Chr5g0420941 33.333 300 184 5 3 295 45 335 1.04e-50 171
Msa0515760 MtrunA17_Chr5g0420901 33.000 300 185 5 3 295 46 336 1.28e-50 171
Msa0515760 MtrunA17_Chr2g0296371 33.882 304 182 6 3 295 50 345 1.93e-50 171
Msa0515760 MtrunA17_Chr5g0421101 36.162 271 160 4 3 266 47 311 1.94e-50 170
Msa0515760 MtrunA17_Chr1g0184161 32.680 306 170 8 2 290 37 323 2.01e-50 170
Msa0515760 MtrunA17_Chr5g0421091 36.496 274 158 6 3 267 45 311 2.06e-50 170
Msa0515760 MtrunA17_Chr1g0162351 35.077 325 168 12 3 296 69 381 4.10e-50 171
Msa0515760 MtrunA17_Chr8g0375681 37.200 250 139 5 35 274 15 256 1.08e-49 167
Msa0515760 MtrunA17_Chr7g0220011 31.438 299 181 7 2 290 38 322 1.80e-49 167
Msa0515760 MtrunA17_Chr5g0412671 35.093 322 174 10 2 306 37 340 2.03e-49 167
Msa0515760 MtrunA17_Chr5g0424201 34.564 298 172 7 1 287 42 327 2.45e-49 167
Msa0515760 MtrunA17_Chr4g0050031 34.237 295 179 7 3 289 62 349 3.80e-49 167
Msa0515760 MtrunA17_Chr5g0398291 33.813 278 168 6 3 267 47 321 5.55e-49 166
Msa0515760 MtrunA17_Chr1g0162321 34.161 322 175 9 3 296 69 381 8.10e-49 167
Msa0515760 MtrunA17_Chr1g0162361 33.677 291 160 7 3 271 27 306 8.84e-49 166
Msa0515760 MtrunA17_Chr4g0064781 33.096 281 174 3 1 274 48 321 1.00e-48 166
Msa0515760 MtrunA17_Chr3g0087031 31.803 305 186 6 1 295 58 350 2.28e-48 165
Msa0515760 MtrunA17_Chr1g0184101 34.752 282 161 8 3 272 38 308 5.95e-48 163
Msa0515760 MtrunA17_Chr2g0314391 33.212 274 170 4 1 266 68 336 1.52e-47 163
Msa0515760 MtrunA17_Chr8g0371931 34.066 273 159 7 3 262 39 303 5.13e-47 162
Msa0515760 MtrunA17_Chr5g0424211 32.509 283 171 6 1 271 40 314 6.59e-47 160
Msa0515760 MtrunA17_Chr5g0423211 32.673 303 184 7 3 295 47 339 9.27e-47 160
Msa0515760 MtrunA17_Chr2g0311631 33.663 303 168 10 3 287 55 342 9.37e-47 161
Msa0515760 MtrunA17_Chr1g0184121 33.103 290 170 8 2 278 36 314 1.79e-46 160
Msa0515760 MtrunA17_Chr3g0145171 31.884 276 176 4 1 268 50 321 2.38e-46 159
Msa0515760 MtrunA17_Chr3g0114861 34.286 280 167 5 1 271 38 309 2.53e-46 159
Msa0515760 MtrunA17_Chr1g0184111 32.143 308 180 11 2 295 36 328 3.10e-46 159
Msa0515760 MtrunA17_Chr7g0232161 36.327 245 135 6 3 236 60 294 1.05e-45 157
Msa0515760 MtrunA17_Chr2g0311681 32.955 264 153 7 1 252 61 312 1.71e-45 158
Msa0515760 MtrunA17_Chr2g0311711 33.101 287 164 9 1 271 65 339 2.18e-45 157
Msa0515760 MtrunA17_Chr2g0311691 31.959 291 165 10 1 271 61 338 2.30e-45 157
Msa0515760 MtrunA17_Chr7g0239071 30.693 303 177 5 8 295 6 290 5.10e-45 155
Msa0515760 MtrunA17_Chr1g0187831 33.224 304 182 11 3 295 70 363 5.88e-45 157
Msa0515760 MtrunA17_Chr2g0311921 29.967 307 178 8 3 290 54 342 2.15e-44 154
Msa0515760 MtrunA17_Chr8g0336851 33.333 282 168 9 2 271 59 332 2.35e-44 155
Msa0515760 MtrunA17_Chr2g0311701 31.119 286 174 7 1 271 67 344 3.16e-44 155
Msa0515760 MtrunA17_Chr1g0184151 32.000 300 180 9 2 290 37 323 4.08e-44 153
Msa0515760 MtrunA17_Chr8g0348081 31.494 308 185 11 2 296 59 353 9.37e-44 153
Msa0515760 MtrunA17_Chr5g0405411 33.942 274 158 8 3 262 39 303 1.07e-43 153
Msa0515760 MtrunA17_Chr2g0319491 30.375 293 175 9 3 286 33 305 1.08e-43 152
Msa0515760 MtrunA17_Chr8g0336761 32.384 281 172 9 2 271 59 332 1.48e-43 152
Msa0515760 MtrunA17_Chr4g0045451 33.445 299 161 10 2 271 25 314 1.58e-43 152
Msa0515760 MtrunA17_Chr3g0102041 32.975 279 154 8 3 262 39 303 2.05e-43 152
Msa0515760 MtrunA17_Chr8g0371921 32.258 279 156 8 3 262 39 303 2.11e-43 152
Msa0515760 MtrunA17_Chr8g0370711 31.868 273 174 3 3 267 52 320 2.35e-43 152
Msa0515760 MtrunA17_Chr8g0336781 32.362 309 182 11 2 296 94 389 3.00e-43 152
Msa0515760 MtrunA17_Chr1g0187821 30.744 309 176 11 1 288 65 356 3.51e-43 152
Msa0515760 MtrunA17_Chr7g0250511 31.894 301 174 8 2 287 48 332 6.79e-43 150
Msa0515760 MtrunA17_Chr2g0311831 32.450 302 172 12 3 288 68 353 1.18e-42 150
Msa0515760 MtrunA17_Chr1g0167911 33.333 294 172 10 3 282 54 337 1.46e-42 150
Msa0515760 MtrunA17_Chr2g0311761 33.333 303 178 12 3 292 68 359 1.91e-42 150
Msa0515760 MtrunA17_Chr4g0045441 32.432 296 158 8 4 271 33 314 2.43e-42 149
Msa0515760 MtrunA17_Chr1g0187811 30.719 306 182 10 1 288 186 479 8.26e-42 150
Msa0515760 MtrunA17_Chr8g0336861 31.270 307 185 11 2 294 59 353 2.28e-41 147
Msa0515760 MtrunA17_Chr8g0370721 31.136 273 176 3 3 267 52 320 3.49e-41 146
Msa0515760 MtrunA17_Chr1g0148771 30.795 302 177 8 2 292 62 342 3.85e-41 146
Msa0515760 MtrunA17_Chr8g0336751 32.394 284 169 9 1 271 92 365 4.50e-41 147
Msa0515760 MtrunA17_Chr4g0066121 31.457 302 184 11 2 291 59 349 1.26e-40 145
Msa0515760 MtrunA17_Chr4g0045471 30.159 315 180 9 2 287 25 328 1.44e-40 144
Msa0515760 MtrunA17_Chr8g0354261 32.463 268 151 9 1 252 66 319 4.76e-40 144
Msa0515760 MtrunA17_Chr8g0364471 32.103 271 146 9 1 252 65 316 5.91e-40 143
Msa0515760 MtrunA17_Chr7g0225881 31.922 307 171 13 3 290 67 354 6.92e-40 143
Msa0515760 MtrunA17_Chr2g0332191 31.502 273 172 6 3 267 52 317 8.72e-40 143
Msa0515760 MtrunA17_Chr3g0092531 31.353 303 190 7 3 297 6 298 1.14e-39 141
Msa0515760 MtrunA17_Chr4g0055591 31.698 265 148 8 2 252 60 305 1.29e-39 142
Msa0515760 MtrunA17_Chr2g0311861 31.419 296 167 10 3 290 64 331 1.29e-39 142
Msa0515760 MtrunA17_Chr2g0285931 31.683 303 173 11 2 286 27 313 1.41e-39 141
Msa0515760 MtrunA17_Chr8g0354241 31.488 289 174 12 1 274 66 345 1.83e-39 142
Msa0515760 MtrunA17_Chr2g0311741 31.119 286 168 10 1 271 25 296 1.84e-39 141
Msa0515760 MtrunA17_Chr7g0235951 32.567 261 158 9 1 252 65 316 9.23e-39 140
Msa0515760 MtrunA17_Chr1g0184241 31.673 281 166 8 3 271 69 335 1.62e-38 139
Msa0515760 MtrunA17_Chr3g0145181 28.417 278 184 4 1 267 47 320 1.87e-38 139
Msa0515760 MtrunA17_Chr8g0336631 29.530 298 194 8 2 290 59 349 2.65e-38 139
Msa0515760 MtrunA17_Chr3g0114871 37.021 235 128 7 1 224 40 265 3.09e-38 136
Msa0515760 MtrunA17_Chr2g0314371 32.692 260 128 5 1 224 50 298 4.61e-38 137
Msa0515760 MtrunA17_Chr7g0239091 28.025 314 193 8 3 306 160 450 4.73e-38 140
Msa0515760 MtrunA17_Chr3g0125421 31.373 306 180 9 1 287 34 328 7.31e-38 137
Msa0515760 MtrunA17_Chr2g0313111 30.743 296 177 11 2 286 27 305 9.48e-38 136
Msa0515760 MtrunA17_Chr4g0045431 30.573 314 179 10 2 287 25 327 2.61e-37 135
Msa0515760 MtrunA17_Chr1g0167961 31.488 289 163 9 2 271 68 340 1.65e-36 134
Msa0515760 MtrunA17_Chr6g0472861 30.421 309 173 12 3 290 70 357 2.62e-36 134
Msa0515760 MtrunA17_Chr3g0145201 28.417 278 184 4 1 267 682 955 2.92e-36 138
Msa0515760 MtrunA17_Chr1g0204181 27.575 301 192 7 1 284 57 348 4.29e-36 133
Msa0515760 MtrunA17_Chr4g0068891 29.097 299 180 9 3 286 20 301 8.12e-36 131
Msa0515760 MtrunA17_Chr3g0093761 30.795 302 177 11 2 290 55 337 1.85e-35 131
Msa0515760 MtrunA17_Chr8g0351101 28.094 299 190 8 1 283 52 341 1.88e-35 131
Msa0515760 MtrunA17_Chr3g0093751 29.766 299 185 8 2 290 55 338 3.14e-35 130
Msa0515760 MtrunA17_Chr3g0093741 29.801 302 181 10 2 290 55 338 3.56e-35 130
Msa0515760 MtrunA17_Chr6g0474391 27.483 302 189 7 1 283 62 352 4.17e-35 130
Msa0515760 MtrunA17_Chr8g0335411 30.619 307 187 12 1 292 65 360 1.41e-34 129
Msa0515760 MtrunA17_Chr7g0247991 29.808 312 178 12 1 290 65 357 1.53e-34 129
Msa0515760 MtrunA17_Chr1g0191201 28.477 302 190 7 3 287 53 345 2.82e-34 128
Msa0515760 MtrunA17_Chr3g0130391 27.181 298 191 7 4 284 67 355 4.50e-34 128
Msa0515760 MtrunA17_Chr1g0167951 30.345 290 166 10 2 272 52 324 6.83e-34 127
Msa0515760 MtrunA17_Chr1g0194321 27.937 315 190 10 1 291 18 319 1.53e-33 125
Msa0515760 MtrunA17_Chr1g0167931 30.072 276 145 7 2 271 53 286 1.67e-33 125
Msa0515760 MtrunA17_Chr4g0053251 28.931 318 182 10 2 287 7 312 1.84e-33 125
Msa0515760 MtrunA17_Chr5g0420721 33.846 195 119 3 102 295 54 239 1.90e-33 123
Msa0515760 MtrunA17_Chr8g0358941 30.547 311 180 14 3 293 27 321 2.01e-33 125
Msa0515760 MtrunA17_Chr7g0235981 34.764 233 119 8 35 252 56 270 6.86e-33 124
Msa0515760 MtrunA17_Chr4g0011311 30.303 264 149 10 1 248 65 309 9.23e-33 122
Msa0515760 MtrunA17_Chr3g0105281 30.682 264 156 7 3 254 34 282 1.37e-32 122
Msa0515760 MtrunA17_Chr4g0066991 32.946 258 141 10 1 252 65 296 6.68e-32 121
Msa0515760 MtrunA17_Chr4g0052251 29.355 310 188 12 2 295 28 322 7.49e-32 121
Msa0515760 MtrunA17_Chr1g0161041 29.773 309 171 12 3 290 96 379 8.88e-32 122
Msa0515760 MtrunA17_Chr7g0236011 29.967 307 184 11 1 290 65 357 1.63e-31 120
Msa0515760 MtrunA17_Chr7g0266651 31.071 280 165 9 2 262 58 328 1.86e-31 120
Msa0515760 MtrunA17_Chr3g0126761 35.484 186 112 3 110 295 44 221 1.27e-30 115
Msa0515760 MtrunA17_Chr7g0265351 29.470 302 178 12 2 288 38 319 1.91e-30 117
Msa0515760 MtrunA17_Chr1g0161081 28.615 325 164 14 3 295 73 361 3.83e-29 114
Msa0515760 MtrunA17_Chr1g0161111 29.299 314 179 13 3 299 132 419 5.71e-29 115
Msa0515760 MtrunA17_Chr8g0384461 30.037 273 162 9 1 254 45 307 2.19e-28 112
Msa0515760 MtrunA17_Chr5g0407781 27.609 297 196 6 3 295 5 286 4.11e-28 110
Msa0515760 MtrunA17_Chr1g0158011 34.043 235 146 7 40 271 1 229 6.28e-28 108
Msa0515760 MtrunA17_Chr5g0420881 41.667 108 63 0 160 267 1 108 8.32e-28 105
Msa0515760 MtrunA17_Chr8g0362741 31.224 237 122 8 1 224 65 273 1.67e-27 108
Msa0515760 MtrunA17_Chr4g0064771 32.749 171 104 2 111 281 27 186 1.24e-26 104
Msa0515760 MtrunA17_Chr5g0394071 33.898 177 96 4 113 286 5 163 7.44e-26 101
Msa0515760 MtrunA17_Chr4g0037611 36.025 161 87 5 127 286 8 153 7.61e-26 101
Msa0515760 MtrunA17_Chr4g0055911 30.293 307 181 14 1 287 7 300 1.14e-25 104
Msa0515760 MtrunA17_Chr4g0075431 39.759 166 87 5 4 164 5 162 2.09e-25 100
Msa0515760 MtrunA17_Chr1g0170631 33.152 184 111 4 110 291 3 176 2.12e-25 100
Msa0515760 MtrunA17_Chr5g0407731 26.460 291 195 5 3 289 33 308 2.41e-25 103
Msa0515760 MtrunA17_Chr8g0384481 26.000 300 189 9 1 281 57 342 4.11e-25 103
Msa0515760 MtrunA17_Chr4g0045461 28.616 318 177 10 2 286 25 325 1.57e-24 102
Msa0515760 MtrunA17_Chr6g0486831 29.712 313 178 11 5 288 23 322 2.11e-24 100
Msa0515760 MtrunA17_Chr1g0158021 31.718 227 128 7 3 216 49 261 5.40e-24 98.6
Msa0515760 MtrunA17_Chr7g0233661 44.118 102 56 1 159 260 20 120 6.27e-24 95.5
Msa0515760 MtrunA17_Chr8g0336801 34.815 135 81 3 162 293 13 143 3.25e-23 93.6
Msa0515760 MtrunA17_Chr8g0348951 25.589 297 196 10 3 287 10 293 4.35e-23 97.1
Msa0515760 MtrunA17_Chr3g0092581 31.461 178 114 4 120 297 1 170 1.21e-22 92.8
Msa0515760 MtrunA17_Chr8g0389941 28.155 309 186 10 5 288 36 333 2.48e-22 95.5
Msa0515760 MtrunA17_Chr4g0004071 27.178 287 185 8 3 279 9 281 1.41e-21 92.8
Msa0515760 MtrunA17_Chr2g0319521 39.344 122 69 3 106 224 5 124 4.79e-21 87.4
Msa0515760 MtrunA17_Chr2g0293931 33.136 169 102 6 111 272 8 172 1.38e-20 87.8
Msa0515760 MtrunA17_Chr3g0138351 27.273 286 188 9 1 271 5 285 2.12e-20 89.7
Msa0515760 MtrunA17_Chr8g0336871 31.250 176 103 6 123 295 3 163 2.35e-20 86.3
Msa0515760 MtrunA17_Chr4g0055871 28.889 270 163 12 3 255 9 266 3.34e-20 89.0
Msa0515760 MtrunA17_Chr8g0364171 36.000 125 69 4 108 229 16 132 7.52e-20 84.3
Msa0515760 MtrunA17_Chr4g0004061 24.490 294 206 5 3 286 9 296 1.12e-19 87.4
Msa0515760 MtrunA17_Chr7g0247741 25.256 293 201 9 3 287 11 293 1.55e-19 87.4
Msa0515760 MtrunA17_Chr8g0375581 50.000 62 31 0 159 220 24 85 3.27e-19 80.5
Msa0515760 MtrunA17_Chr4g0009561 25.733 307 192 11 3 287 7 299 3.67e-19 86.3
Msa0515760 MtrunA17_Chr7g0256741 25.857 321 197 9 3 303 10 309 1.27e-17 82.0
Msa0515760 MtrunA17_Chr7g0219991 37.273 110 61 2 111 219 249 351 3.60e-17 80.9
Msa0515760 MtrunA17_Chr8g0336831 27.979 193 122 7 2 184 59 244 1.51e-16 77.8
Msa0515760 MtrunA17_Chr1g0158031 31.613 155 96 5 120 271 1 148 2.80e-16 75.5
Msa0515760 MtrunA17_Chr4g0009541 27.670 206 135 7 84 287 103 296 1.80e-15 75.5
Msa0515760 MtrunA17_Chr2g0311611 43.056 72 33 2 160 224 1 71 1.30e-14 67.8
Msa0515760 MtrunA17_Chr8g0375641 36.000 100 61 1 1 97 50 149 1.58e-13 67.8
Msa0515760 MtrunA17_Chr1g0167921 34.234 111 67 3 113 223 52 156 3.76e-13 66.6
Msa0515760 MtrunA17_Chr1g0161101 42.553 94 43 3 162 254 408 491 4.06e-13 69.7
Msa0515760 MtrunA17_Chr8g0375661 34.000 100 63 1 1 97 50 149 5.56e-12 63.2
Msa0515760 MtrunA17_Chr2g0311641 36.082 97 60 2 3 97 55 151 9.38e-12 62.4
Msa0515760 MtrunA17_Chr5g0420891 36.170 94 59 1 3 96 46 138 1.47e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515760 AT1G77330.1 73.163 313 73 4 1 308 1 307 5.45e-167 466
Msa0515760 AT1G62380.1 50.482 311 137 4 1 306 5 303 9.34e-110 322
Msa0515760 AT1G12010.1 50.649 308 135 4 4 306 8 303 9.07e-106 311
Msa0515760 AT1G05010.1 49.045 314 146 5 2 308 3 309 2.60e-101 300
Msa0515760 AT2G19590.1 44.444 315 149 6 1 308 9 304 5.41e-85 258
Msa0515760 AT5G24530.1 40.476 294 152 6 4 286 39 320 3.40e-70 221
Msa0515760 AT2G19590.2 44.170 283 132 6 33 308 26 289 1.58e-69 218
Msa0515760 AT4G10490.1 36.156 307 170 9 2 295 41 334 6.29e-63 203
Msa0515760 AT4G10500.1 36.824 296 165 8 2 285 43 328 2.13e-62 201
Msa0515760 AT5G05600.1 36.054 294 172 4 3 286 62 349 3.62e-60 196
Msa0515760 AT2G38240.1 33.333 300 186 4 1 293 46 338 1.16e-59 194
Msa0515760 AT4G16330.2 33.555 301 170 7 2 290 66 348 2.04e-56 186
Msa0515760 AT3G11180.1 36.054 294 172 5 1 286 93 378 4.02e-56 187
Msa0515760 AT3G11180.2 36.054 294 172 5 1 286 93 378 4.96e-56 186
Msa0515760 AT5G08640.2 35.811 296 167 7 2 286 42 325 5.24e-56 184
Msa0515760 AT5G08640.1 35.811 296 167 7 2 286 42 325 5.24e-56 184
Msa0515760 AT3G55970.1 34.875 281 170 4 2 271 51 329 1.43e-54 182
Msa0515760 AT1G78550.1 33.813 278 171 3 3 272 53 325 2.30e-51 173
Msa0515760 AT3G19010.1 36.054 294 153 7 3 271 28 311 1.17e-50 171
Msa0515760 AT3G19010.4 36.054 294 153 7 3 271 28 311 1.17e-50 171
Msa0515760 AT1G17010.1 32.000 275 175 3 3 269 54 324 5.06e-50 170
Msa0515760 AT1G17020.1 32.491 277 176 3 1 269 51 324 6.76e-50 169
Msa0515760 AT2G36690.2 34.247 292 176 8 1 282 59 344 1.11e-49 169
Msa0515760 AT2G36690.1 34.247 292 176 8 1 282 59 344 1.11e-49 169
Msa0515760 AT3G19000.1 35.505 307 167 7 3 287 32 329 1.47e-49 168
Msa0515760 AT3G21420.1 34.868 304 180 6 3 295 55 351 5.22e-49 167
Msa0515760 AT5G20400.1 32.990 291 182 4 1 282 43 329 1.03e-48 166
Msa0515760 AT3G12900.1 33.333 300 173 8 6 293 59 343 8.83e-48 164
Msa0515760 AT4G22880.1 31.290 310 190 8 3 299 47 346 8.52e-47 161
Msa0515760 AT4G22880.2 31.290 310 190 8 3 299 47 346 8.52e-47 161
Msa0515760 AT4G22880.3 31.290 310 190 8 3 299 47 346 8.52e-47 161
Msa0515760 AT1G49390.1 32.653 294 179 4 1 282 43 329 1.14e-46 160
Msa0515760 AT5G63590.1 34.564 298 171 8 1 286 12 297 1.37e-46 159
Msa0515760 AT5G05600.2 35.776 232 136 3 3 224 62 290 5.44e-46 157
Msa0515760 AT2G44800.1 31.511 311 180 9 2 296 51 344 5.93e-46 159
Msa0515760 AT4G25310.1 34.661 251 150 3 26 269 76 319 8.34e-46 159
Msa0515760 AT4G25300.1 32.014 278 171 5 3 269 52 322 1.38e-45 158
Msa0515760 AT1G55290.1 33.445 299 169 10 2 287 61 342 3.21e-45 157
Msa0515760 AT3G51240.1 33.333 273 161 7 3 262 38 302 3.47e-45 157
Msa0515760 AT4G16330.1 38.095 210 110 4 88 290 46 242 8.26e-45 153
Msa0515760 AT5G63595.1 35.581 267 140 8 4 264 26 266 1.27e-44 153
Msa0515760 AT4G21200.1 35.667 300 159 10 3 283 42 326 5.82e-44 153
Msa0515760 AT3G19000.2 36.111 252 133 6 3 232 32 277 6.96e-44 151
Msa0515760 AT5G54000.2 31.734 271 172 3 1 262 44 310 6.96e-44 153
Msa0515760 AT3G13610.1 31.788 302 176 10 2 290 61 345 1.24e-43 153
Msa0515760 AT5G20550.1 34.386 285 157 7 1 267 43 315 1.60e-43 152
Msa0515760 AT1G78550.2 33.468 248 153 2 32 272 5 247 2.42e-43 150
Msa0515760 AT5G59530.1 32.509 283 173 8 1 271 56 332 2.98e-43 152
Msa0515760 AT3G19010.3 33.103 290 137 5 3 271 28 281 2.31e-42 149
Msa0515760 AT3G19010.2 37.097 248 121 7 3 225 28 265 2.98e-42 148
Msa0515760 AT3G55970.2 33.333 234 143 4 2 224 51 282 3.32e-42 148
Msa0515760 AT5G43450.1 31.190 311 187 10 1 296 59 357 1.02e-41 148
Msa0515760 AT5G63600.1 30.508 295 178 7 3 287 33 310 1.40e-41 147
Msa0515760 AT1G49390.2 32.677 254 160 2 36 282 1 250 1.73e-41 145
Msa0515760 AT1G44090.1 29.667 300 187 7 1 284 61 352 2.61e-41 147
Msa0515760 AT1G06620.1 33.835 266 160 8 1 258 60 317 8.61e-41 145
Msa0515760 AT3G60290.1 32.558 301 170 11 3 287 52 335 9.86e-41 145
Msa0515760 AT5G63600.2 30.743 296 177 8 3 287 33 311 1.01e-40 144
Msa0515760 AT5G07480.1 30.945 307 174 9 3 287 44 334 1.20e-39 142
Msa0515760 AT1G04380.1 31.579 304 183 9 1 293 43 332 1.82e-39 142
Msa0515760 AT5G54000.1 33.333 234 145 2 36 262 1 230 3.14e-39 139
Msa0515760 AT5G59540.1 30.903 288 170 10 1 271 59 334 6.02e-38 138
Msa0515760 AT1G15550.1 28.938 273 180 5 3 268 57 322 6.40e-38 138
Msa0515760 AT5G43440.1 30.225 311 196 10 1 298 60 362 1.18e-37 137
Msa0515760 AT2G30830.1 33.333 285 166 11 1 271 52 326 1.37e-37 137
Msa0515760 AT1G03400.1 32.830 265 157 10 1 258 54 304 7.97e-37 135
Msa0515760 AT1G04350.1 31.206 282 174 11 1 271 56 328 1.08e-36 135
Msa0515760 AT1G60980.1 27.362 307 191 8 1 287 55 349 5.52e-36 133
Msa0515760 AT1G47990.1 30.693 303 173 10 3 286 15 299 6.64e-36 132
Msa0515760 AT1G03410.2 30.970 268 165 10 1 257 55 313 9.59e-36 132
Msa0515760 AT1G03410.1 30.970 268 165 10 1 257 92 350 1.59e-35 132
Msa0515760 AT1G80340.1 27.333 300 197 8 3 293 50 337 2.05e-35 131
Msa0515760 AT5G63580.2 34.052 232 135 5 2 224 18 240 3.21e-35 128
Msa0515760 AT2G30840.1 32.056 287 168 10 1 271 55 330 4.45e-35 130
Msa0515760 AT5G63580.1 33.913 230 134 5 2 222 18 238 8.98e-35 127
Msa0515760 AT1G30040.1 30.519 308 184 13 2 295 30 321 1.07e-34 129
Msa0515760 AT1G80330.1 30.797 276 173 8 2 266 48 316 1.67e-34 129
Msa0515760 AT4G25420.1 26.059 307 194 8 1 287 59 352 2.34e-34 129
Msa0515760 AT3G61400.1 28.947 304 191 10 5 295 69 360 3.39e-34 128
Msa0515760 AT3G51240.2 37.705 183 99 4 89 262 42 218 4.25e-34 125
Msa0515760 AT5G43935.1 30.405 296 164 10 3 287 19 283 2.20e-33 124
Msa0515760 AT2G34555.1 31.803 305 176 13 1 290 25 312 3.62e-33 125
Msa0515760 AT1G06650.2 29.930 284 159 11 2 266 63 325 4.10e-33 125
Msa0515760 AT1G78440.1 26.923 312 173 11 3 286 18 302 5.58e-33 124
Msa0515760 AT5G51810.1 25.249 301 200 5 1 287 61 350 6.18e-33 125
Msa0515760 AT3G50210.4 27.439 328 200 8 2 295 7 330 6.91e-33 124
Msa0515760 AT3G50210.1 27.439 328 200 8 2 295 7 330 6.91e-33 124
Msa0515760 AT3G50210.3 27.439 328 200 8 2 295 7 330 6.91e-33 124
Msa0515760 AT5G07200.1 26.885 305 198 7 1 287 56 353 1.73e-32 124
Msa0515760 AT5G43450.2 33.047 233 134 8 1 223 59 279 2.98e-32 121
Msa0515760 AT1G50960.1 30.483 269 169 8 1 260 38 297 4.97e-32 122
Msa0515760 AT1G06620.2 34.052 232 135 9 2 224 61 283 1.35e-31 119
Msa0515760 AT2G25450.1 31.579 266 155 10 1 252 53 305 1.47e-31 121
Msa0515760 AT1G03400.2 33.466 251 140 11 1 238 54 290 1.84e-31 121
Msa0515760 AT4G25300.2 36.646 161 98 1 109 269 72 228 3.62e-31 117
Msa0515760 AT2G30840.3 31.707 287 163 11 1 271 55 324 3.66e-31 120
Msa0515760 AT1G06645.1 28.125 288 173 8 2 271 76 347 7.33e-31 119
Msa0515760 AT3G49630.1 29.747 316 184 12 3 287 9 317 7.92e-31 118
Msa0515760 AT4G25310.2 30.677 251 132 4 26 269 76 291 9.38e-31 118
Msa0515760 AT3G49630.3 29.452 292 178 10 17 287 29 313 1.44e-30 117
Msa0515760 AT1G04380.2 32.479 234 139 7 1 226 43 265 4.78e-30 115
Msa0515760 AT1G06640.1 29.110 292 168 12 2 271 63 337 2.24e-29 115
Msa0515760 AT5G59540.2 31.513 238 137 9 1 224 59 284 1.76e-28 111
Msa0515760 AT3G49620.1 27.575 301 192 9 7 287 48 342 2.28e-28 112
Msa0515760 AT1G02400.1 26.748 329 190 14 4 305 25 329 3.38e-28 111
Msa0515760 AT5G43440.2 31.624 234 144 8 1 226 60 285 4.76e-28 110
Msa0515760 AT5G07480.2 34.091 176 104 3 102 271 43 212 5.03e-28 109
Msa0515760 AT4G23340.1 31.154 260 162 9 1 251 8 259 1.03e-27 110
Msa0515760 AT5G12270.1 27.667 300 193 9 3 290 56 343 1.46e-27 110
Msa0515760 AT3G61400.2 31.466 232 135 9 5 224 69 288 6.63e-27 107
Msa0515760 AT2G30840.2 31.780 236 137 8 1 223 55 279 7.29e-27 107
Msa0515760 AT1G06650.1 30.417 240 132 9 2 223 63 285 1.02e-26 107
Msa0515760 AT4G21690.1 24.590 305 204 8 3 293 47 339 1.50e-26 107
Msa0515760 AT3G47190.1 29.151 271 159 8 3 254 32 288 1.36e-25 104
Msa0515760 AT5G58660.1 26.990 289 169 7 3 260 34 311 2.09e-24 101
Msa0515760 AT1G06640.2 29.150 247 140 10 2 230 63 292 3.54e-23 97.8
Msa0515760 AT1G14130.1 27.500 280 181 8 3 274 9 274 1.25e-22 95.9
Msa0515760 AT1G52820.1 25.862 290 193 6 1 281 10 286 1.37e-22 95.9
Msa0515760 AT1G06640.3 29.958 237 131 10 2 220 63 282 1.45e-22 95.5
Msa0515760 AT3G49630.2 32.292 192 119 6 100 287 60 244 5.49e-22 93.2
Msa0515760 AT5G51310.1 26.384 307 194 13 1 287 3 297 2.24e-21 92.8
Msa0515760 AT5G51810.2 24.481 241 160 5 1 227 61 293 3.76e-21 91.7
Msa0515760 AT4G25420.2 25.410 244 152 8 1 224 59 292 5.67e-21 91.3
Msa0515760 AT3G50210.2 29.064 203 133 4 100 295 50 248 2.56e-20 88.6
Msa0515760 AT5G58660.2 26.190 252 145 6 3 224 34 274 4.02e-19 85.9
Msa0515760 AT1G30040.2 28.270 237 143 12 2 224 30 253 4.77e-19 85.5
Msa0515760 AT3G46490.1 27.545 334 190 12 2 307 16 325 1.31e-18 85.1
Msa0515760 AT3G46500.5 26.644 289 185 9 2 271 16 296 2.82e-18 84.3
Msa0515760 AT1G35190.1 26.897 290 181 9 1 264 7 291 5.61e-18 83.2
Msa0515760 AT1G14120.2 25.436 287 187 7 2 281 7 273 7.92e-18 82.8
Msa0515760 AT1G14120.1 25.436 287 187 7 2 281 7 273 7.92e-18 82.8
Msa0515760 AT1G14120.3 25.436 287 187 7 2 281 7 273 7.92e-18 82.8
Msa0515760 AT1G35190.2 27.240 279 151 9 1 254 7 258 2.46e-17 81.3
Msa0515760 AT4G23340.2 32.967 182 107 8 113 287 1 174 4.10e-17 79.0
Msa0515760 AT4G03070.1 23.256 301 208 9 3 290 14 304 1.70e-16 79.0
Msa0515760 AT3G46490.2 29.137 278 158 10 2 251 16 282 2.15e-16 78.6
Msa0515760 AT3G46500.7 26.259 278 177 9 2 260 16 284 4.91e-16 77.4
Msa0515760 AT4G22870.1 36.111 108 61 3 193 299 2 102 6.07e-15 70.5
Msa0515760 AT1G52820.2 25.322 233 159 5 1 224 10 236 8.05e-14 70.5
Msa0515760 AT1G02400.2 24.096 249 143 11 4 227 25 252 1.05e-13 70.5
Msa0515760 AT4G16765.6 27.391 230 136 10 73 287 23 236 2.23e-12 66.2
Msa0515760 AT4G16765.1 27.391 230 136 10 73 287 23 236 2.23e-12 66.2
Msa0515760 AT4G16765.2 27.391 230 136 10 73 287 23 236 2.23e-12 66.2
Msa0515760 AT1G52800.1 23.846 260 180 7 3 251 10 262 2.64e-12 66.6
Msa0515760 AT4G22870.2 33.981 103 60 3 198 299 48 143 4.42e-12 63.5
Msa0515760 AT1G80320.1 22.837 289 198 10 2 279 8 282 6.09e-12 65.9
Msa0515760 AT4G16765.3 29.442 197 111 9 73 254 23 206 7.76e-12 64.3
Msa0515760 AT4G03050.2 30.328 122 73 4 174 290 275 389 8.58e-11 62.8
Msa0515760 AT4G03050.1 30.328 122 73 4 174 290 275 389 8.58e-11 62.8

Find 117 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGCCATTCTGTTAATAA+TGG 0.222884 3_4:-67101500 Msa0515760:three_prime_UTR
GTTAATAATGGGAACCATAA+TGG 0.240425 3_4:-67101488 Msa0515760:three_prime_UTR
ATTCAGAAGCTTCACTGTTT+TGG 0.241962 3_4:+67102810 None:intergenic
CAGGACTTATAGTGGCCTTC+AGG 0.253489 3_4:+67101777 None:intergenic
CAGAAAATACACCAAGTTTC+AGG 0.278523 3_4:-67102702 Msa0515760:intron
CAGAGTATTCTAAAATAAAA+TGG 0.287479 3_4:+67101447 None:intergenic
AGGTTGTTTGAGATTTGTTT+TGG 0.298842 3_4:+67103252 None:intergenic
GAAGGAGACAATGCTTTCTT+TGG 0.306476 3_4:-67102094 Msa0515760:CDS
CGGAGACCATTCACAAGTTC+TGG 0.311932 3_4:+67102037 None:intergenic
AGCAATCTGTGCCAAAGTTT+TGG 0.312956 3_4:+67103098 None:intergenic
ACTAATACTAATGCCCATTA+TGG 0.313272 3_4:+67101474 None:intergenic
AGAAGTGATGGATGAGAATC+TGG 0.320321 3_4:-67102158 Msa0515760:CDS
CTTACTTTCATATATAAATC+TGG 0.327168 3_4:-67101606 Msa0515760:three_prime_UTR
GCCTTCTTGATGTATCCTTT+TGG 0.328825 3_4:+67102130 None:intergenic
TGAAGAATGGGGATTCTTCC+AGG 0.346020 3_4:-67103067 Msa0515760:intron
GTTGCCATTCTGTTAATAAT+GGG 0.352808 3_4:-67101499 Msa0515760:three_prime_UTR
GCTCTAAACCTTGGTTCCTT+GGG 0.361027 3_4:+67101653 None:intergenic
AGCTCTAAACCTTGGTTCCT+TGG 0.362385 3_4:+67101652 None:intergenic
CCCCATCTTTGAGCATTTGA+AGG 0.370292 3_4:+67101957 None:intergenic
GGAGATTGTATGCATACATC+TGG 0.376976 3_4:-67101401 Msa0515760:three_prime_UTR
CCTTGTCATCTTGGAATAGT+AGG 0.383165 3_4:+67101987 None:intergenic
TTAATAATGGGAACCATAAT+GGG 0.384611 3_4:-67101487 Msa0515760:three_prime_UTR
GATAAGTGTCATCAACTTGC+TGG 0.385544 3_4:+67101729 None:intergenic
GGCCACCTACCTTGTCATCT+TGG 0.385632 3_4:+67101978 None:intergenic
TGCTTTATCTTCAACTGTAA+TGG 0.404595 3_4:-67101426 Msa0515760:three_prime_UTR
TCGGTCTGAGTTAAAGAAAC+TGG 0.406446 3_4:-67102194 Msa0515760:CDS
GTTGATCAATCACGGCATTC+CGG 0.415697 3_4:-67102908 Msa0515760:CDS
CTTATAGTGGCCTTCAGGGG+TGG 0.418937 3_4:+67101782 None:intergenic
GATGAGGGCAGGGTGGGTAG+TGG 0.420721 3_4:+67102059 None:intergenic
ACTTTGGCACAGATTGCTAA+TGG 0.421342 3_4:-67103093 Msa0515760:CDS
CTTCAGGGGTGGGTTATAGA+AGG 0.421469 3_4:+67101793 None:intergenic
TTCATCTGAGTTCTATAAGC+TGG 0.427385 3_4:-67102857 Msa0515760:CDS
TATAAGTCCTGCACCACAAT+TGG 0.434467 3_4:-67101765 Msa0515760:CDS
TGCTAATGGCTGTGAAGAAT+GGG 0.441465 3_4:-67103079 Msa0515760:CDS
TTATAGTGGCCTTCAGGGGT+GGG 0.443347 3_4:+67101783 None:intergenic
ACCCTTTCAAGAAGTTCCTC+CGG 0.444513 3_4:+67102889 None:intergenic
ACTTCTTGAAAGGGTGAAGA+AGG 0.445400 3_4:-67102881 Msa0515760:CDS
TCAATGACTGGCACTGCCAT+TGG 0.452687 3_4:+67103150 None:intergenic
GCCTTCAAATGCTCAAAGAT+GGG 0.458240 3_4:-67101958 Msa0515760:CDS
GGTTCCCATTATTAACAGAA+TGG 0.459749 3_4:+67101495 None:intergenic
CACAAGTTCTGGATGAGGGC+AGG 0.469281 3_4:+67102048 None:intergenic
GGCCTTCAAATGCTCAAAGA+TGG 0.469771 3_4:-67101959 Msa0515760:CDS
GGGTGGGTAGTGGCTGACCT+TGG 0.474958 3_4:+67102069 None:intergenic
GGAGGATGTTATCACTCTCT+TGG 0.475094 3_4:-67102740 Msa0515760:CDS
AGGACTTATAGTGGCCTTCA+GGG 0.476831 3_4:+67101778 None:intergenic
GATACAAGAGTTGTTGGCAC+AGG 0.480691 3_4:-67101856 Msa0515760:CDS
GAGAGAGAAAGATATGAAGA+AGG 0.481239 3_4:+67103232 None:intergenic
TGAAGAAAGGGCCAAAACTT+TGG 0.481879 3_4:-67103109 Msa0515760:CDS
CAATGGCATTTGGCAAAGGT+TGG 0.485635 3_4:+67101921 None:intergenic
ATTGATTTCTCAAAGCTCAA+TGG 0.489703 3_4:-67103132 Msa0515760:CDS
GAAGGATGCAATTGATCTCC+TGG 0.489897 3_4:+67101811 None:intergenic
TCTTGTATCTGCCATTGCTC+AGG 0.490966 3_4:+67101870 None:intergenic
ATGGCAGATACAAGAGTTGT+TGG 0.491642 3_4:-67101862 Msa0515760:CDS
TTGCTAATGGCTGTGAAGAA+TGG 0.495093 3_4:-67103080 Msa0515760:CDS
TTTCCTTTGTACCTGAAACT+TGG 0.497521 3_4:+67102691 None:intergenic
TCCGGAGGAACTTCTTGAAA+GGG 0.500526 3_4:-67102890 Msa0515760:CDS
CAAAGCTCAATGGTGAAGAA+AGG 0.504049 3_4:-67103122 Msa0515760:CDS
CTCCGAGCTCATACAGATGC+AGG 0.505009 3_4:-67102019 Msa0515760:CDS
ATCAAGAAGGCACTGAATGA+TGG 0.512896 3_4:-67102118 Msa0515760:CDS
TGACCTCTACGGAGGGTACC+AGG 0.518554 3_4:-67101829 Msa0515760:CDS
AAAGCTCAATGGTGAAGAAA+GGG 0.519903 3_4:-67103121 Msa0515760:CDS
TTGTGGTGCAGGACTTATAG+TGG 0.522653 3_4:+67101769 None:intergenic
GTGTTGATGACAATGGCATT+TGG 0.527344 3_4:+67101911 None:intergenic
TTTATCTTCAACTGTAATGG+TGG 0.528166 3_4:-67101423 Msa0515760:three_prime_UTR
GGGAAACCATGTCAGAATAT+CGG 0.531703 3_4:-67102213 Msa0515760:CDS
GTTCTATAAGCTGGAAAGAG+AGG 0.534017 3_4:-67102848 Msa0515760:CDS
TTCCGGAGGAACTTCTTGAA+AGG 0.534494 3_4:-67102891 Msa0515760:CDS
GCTTTAACAGCTCTAAACCT+TGG 0.537516 3_4:+67101644 None:intergenic
CCTCATCCAGAACTTGTGAA+TGG 0.538028 3_4:-67102043 Msa0515760:CDS
GAGAATCTGGGATTACCAAA+AGG 0.541400 3_4:-67102145 Msa0515760:CDS
CTTCTATAACCCACCCCTGA+AGG 0.542974 3_4:-67101792 Msa0515760:CDS
TAGTCGCCGAAAACGAACTT+AGG 0.544748 3_4:+67101707 None:intergenic
AAATGCTCAAAGATGGGGAA+TGG 0.549631 3_4:-67101952 Msa0515760:CDS
CAATGCTTTCTTTGGCACCA+AGG 0.550393 3_4:-67102086 Msa0515760:CDS
GTTCTGGATGAGGGCAGGGT+GGG 0.552021 3_4:+67102053 None:intergenic
AGCTTTGAGAAATCAATGAC+TGG 0.560667 3_4:+67103138 None:intergenic
TTATCTTCAACTGTAATGGT+GGG 0.561730 3_4:-67101422 Msa0515760:three_prime_UTR
CCATTCACAAGTTCTGGATG+AGG 0.565705 3_4:+67102043 None:intergenic
GCTTTACAGTTGATCAATCA+CGG 0.569400 3_4:-67102916 Msa0515760:intron
CTCCTGCATCTGTATGAGCT+CGG 0.570192 3_4:+67102017 None:intergenic
ATGACAATGGCATTTGGCAA+AGG 0.578431 3_4:+67101917 None:intergenic
ACAAGTTCTGGATGAGGGCA+GGG 0.579112 3_4:+67102049 None:intergenic
CTCAGACCGATATTCTGACA+TGG 0.582362 3_4:+67102207 None:intergenic
GTTTGTAAGAGGTGTAGCTA+TGG 0.582543 3_4:+67103279 None:intergenic
CTCTAAACCTTGGTTCCTTG+GGG 0.589759 3_4:+67101654 None:intergenic
CTCTCTTGGATGATAACGAA+TGG 0.596754 3_4:-67102726 Msa0515760:CDS
TAAACCTTGGTTCCTTGGGG+AGG 0.596862 3_4:+67101657 None:intergenic
ATACAAGAGTTGTTGGCACA+GGG 0.603323 3_4:-67101855 Msa0515760:CDS
GCACAGGGTTCTGACCTCTA+CGG 0.604460 3_4:-67101840 Msa0515760:CDS
AAGGCACTGAATGATGGAGA+AGG 0.607133 3_4:-67102112 Msa0515760:CDS
CATTCACAAGTTCTGGATGA+GGG 0.609573 3_4:+67102044 None:intergenic
CAGATTGAAGTCCTGAGCAA+TGG 0.612775 3_4:-67101881 Msa0515760:CDS
GAGATTGTATGCATACATCT+GGG 0.614752 3_4:-67101400 Msa0515760:three_prime_UTR
AGTTCTGGATGAGGGCAGGG+TGG 0.615239 3_4:+67102052 None:intergenic
CCTACTATTCCAAGATGACA+AGG 0.615698 3_4:-67101987 Msa0515760:CDS
AGTTCCTCCCCAAGGAACCA+AGG 0.616119 3_4:-67101661 Msa0515760:CDS
GGACTTATAGTGGCCTTCAG+GGG 0.617092 3_4:+67101779 None:intergenic
AAAATTGGAGAATGTGGACT+GGG 0.618920 3_4:-67102761 Msa0515760:CDS
ACCAAAAGGATACATCAAGA+AGG 0.621593 3_4:-67102131 Msa0515760:CDS
AATGCCATTGTCATCAACAC+TGG 0.623265 3_4:-67101908 Msa0515760:CDS
GAAGTGATGGATGAGAATCT+GGG 0.625308 3_4:-67102157 Msa0515760:CDS
CCTTCAAATGCTCAAAGATG+GGG 0.631779 3_4:-67101957 Msa0515760:CDS
TTCCAAGATGACAAGGTAGG+TGG 0.632184 3_4:-67101980 Msa0515760:CDS
CTATTCCAAGATGACAAGGT+AGG 0.635329 3_4:-67101983 Msa0515760:CDS
AGTGAATCTCACAGAAGTGA+TGG 0.637610 3_4:-67102170 Msa0515760:CDS
GGTCTTTGTTCTGTAAGACA+TGG 0.647115 3_4:-67101548 Msa0515760:three_prime_UTR
AGGGTTCTGACCTCTACGGA+GGG 0.654601 3_4:-67101836 Msa0515760:CDS
TGAGCAGAAGTTCCTCCCCA+AGG 0.663194 3_4:-67101669 Msa0515760:CDS
ATTGGAGAATGTGGACTGGG+AGG 0.674613 3_4:-67102758 Msa0515760:CDS
GATCAATCACGGCATTCCGG+AGG 0.679589 3_4:-67102905 Msa0515760:CDS
TCTCCTGGTACCCTCCGTAG+AGG 0.679640 3_4:+67101826 None:intergenic
CAGGGTTCTGACCTCTACGG+AGG 0.684543 3_4:-67101837 Msa0515760:CDS
CGAGCTCATACAGATGCAGG+AGG 0.685123 3_4:-67102016 Msa0515760:CDS
CAGTAGCAAAGAATACCACA+TGG 0.690411 3_4:-67101521 Msa0515760:three_prime_UTR
ATCACCAGTGTTGATGACAA+TGG 0.710934 3_4:+67101904 None:intergenic
TTAACAGAATGGCAACCATG+TGG 0.724914 3_4:+67101506 None:intergenic
GCTAATGGCTGTGAAGAATG+GGG 0.725918 3_4:-67103078 Msa0515760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTTATGTTTACAAATAA+TGG - chr3_4:67101593-67101612 Msa0515760:three_prime_UTR 15.0%
!! GTATAACTTAAATAATATTG+TGG - chr3_4:67102100-67102119 Msa0515760:CDS 15.0%
!!! TTCAAAATAACATCTAAAAT+TGG - chr3_4:67102248-67102267 Msa0515760:intron 15.0%
!! TCATTTATGTTTACAAATAA+TGG - chr3_4:67101593-67101612 Msa0515760:three_prime_UTR 15.0%
!! GTATAACTTAAATAATATTG+TGG - chr3_4:67102100-67102119 Msa0515760:CDS 15.0%
!!! TTCAAAATAACATCTAAAAT+TGG - chr3_4:67102248-67102267 Msa0515760:intron 15.0%
!! TATTTATTGGGTTAAGAAAA+TGG + chr3_4:67102184-67102203 None:intergenic 20.0%
!!! TTACTCTTGTTTACTAAAAT+AGG - chr3_4:67102221-67102240 Msa0515760:intron 20.0%
!!! TGAAACCAATATACTTTTAT+AGG - chr3_4:67102286-67102305 Msa0515760:intron 20.0%
!! CTTACTTTCATATATAAATC+TGG - chr3_4:67103023-67103042 Msa0515760:intron 20.0%
!!! CAGAGTATTCTAAAATAAAA+TGG + chr3_4:67103185-67103204 None:intergenic 20.0%
!! TATTTATTGGGTTAAGAAAA+TGG + chr3_4:67102184-67102203 None:intergenic 20.0%
!!! TTACTCTTGTTTACTAAAAT+AGG - chr3_4:67102221-67102240 Msa0515760:intron 20.0%
!!! TGAAACCAATATACTTTTAT+AGG - chr3_4:67102286-67102305 Msa0515760:intron 20.0%
!! CTTACTTTCATATATAAATC+TGG - chr3_4:67103023-67103042 Msa0515760:intron 20.0%
!!! CAGAGTATTCTAAAATAAAA+TGG + chr3_4:67103185-67103204 None:intergenic 20.0%
! ACATAAATGATTTAAGTACC+TGG + chr3_4:67101583-67101602 None:intergenic 25.0%
!! AAACATGAATGCAATTTTTG+TGG - chr3_4:67101646-67101665 Msa0515760:CDS 25.0%
!! GTTATACATTATACTTGCTA+TGG - chr3_4:67102046-67102065 Msa0515760:CDS 25.0%
! CAAGAACAATAATTTCTTTC+TGG + chr3_4:67102081-67102100 None:intergenic 25.0%
!! CGAATCCTATAAAAGTATAT+TGG + chr3_4:67102294-67102313 None:intergenic 25.0%
!! TTAATAATGGGAACCATAAT+GGG - chr3_4:67103142-67103161 Msa0515760:CDS 25.0%
! ACATAAATGATTTAAGTACC+TGG + chr3_4:67101583-67101602 None:intergenic 25.0%
!! AAACATGAATGCAATTTTTG+TGG - chr3_4:67101646-67101665 Msa0515760:CDS 25.0%
!! GTTATACATTATACTTGCTA+TGG - chr3_4:67102046-67102065 Msa0515760:CDS 25.0%
! CAAGAACAATAATTTCTTTC+TGG + chr3_4:67102081-67102100 None:intergenic 25.0%
!! CGAATCCTATAAAAGTATAT+TGG + chr3_4:67102294-67102313 None:intergenic 25.0%
!! TTAATAATGGGAACCATAAT+GGG - chr3_4:67103142-67103161 Msa0515760:CDS 25.0%
!! GGTTGTTTGAGATTTGTTTT+GGG + chr3_4:67101379-67101398 None:intergenic 30.0%
!! AGGTTGTTTGAGATTTGTTT+TGG + chr3_4:67101380-67101399 None:intergenic 30.0%
! TCTTAACTTTTCTGATCCAA+TGG - chr3_4:67101463-67101482 Msa0515760:three_prime_UTR 30.0%
! ATTGATTTCTCAAAGCTCAA+TGG - chr3_4:67101497-67101516 Msa0515760:three_prime_UTR 30.0%
! TGAATGCAATTTTTGTGGTT+TGG - chr3_4:67101651-67101670 Msa0515760:CDS 30.0%
AAAGAAGAGCAGTGAAAAAT+TGG - chr3_4:67101853-67101872 Msa0515760:CDS 30.0%
! ATGCTTGACTAACTTTTACT+TGG + chr3_4:67101977-67101996 None:intergenic 30.0%
! TTATCTTTTTCTGCCAATTG+TGG + chr3_4:67102880-67102899 None:intergenic 30.0%
! ACTTATCCTAAGTTCGTTTT+CGG - chr3_4:67102916-67102935 Msa0515760:intron 30.0%
! AAGTAAGTGCTTTTCTCATA+TGG + chr3_4:67103010-67103029 None:intergenic 30.0%
!!! CGTCTTTTTATTTTGTTTGC+AGG - chr3_4:67103060-67103079 Msa0515760:intron 30.0%
GTTGCCATTCTGTTAATAAT+GGG - chr3_4:67103130-67103149 Msa0515760:CDS 30.0%
! GTTAATAATGGGAACCATAA+TGG - chr3_4:67103141-67103160 Msa0515760:CDS 30.0%
ACTAATACTAATGCCCATTA+TGG + chr3_4:67103158-67103177 None:intergenic 30.0%
TGCTTTATCTTCAACTGTAA+TGG - chr3_4:67103203-67103222 Msa0515760:five_prime_UTR 30.0%
TTTATCTTCAACTGTAATGG+TGG - chr3_4:67103206-67103225 Msa0515760:five_prime_UTR 30.0%
TTATCTTCAACTGTAATGGT+GGG - chr3_4:67103207-67103226 Msa0515760:five_prime_UTR 30.0%
!! GGTTGTTTGAGATTTGTTTT+GGG + chr3_4:67101379-67101398 None:intergenic 30.0%
!! AGGTTGTTTGAGATTTGTTT+TGG + chr3_4:67101380-67101399 None:intergenic 30.0%
! TCTTAACTTTTCTGATCCAA+TGG - chr3_4:67101463-67101482 Msa0515760:three_prime_UTR 30.0%
! ATTGATTTCTCAAAGCTCAA+TGG - chr3_4:67101497-67101516 Msa0515760:three_prime_UTR 30.0%
! TGAATGCAATTTTTGTGGTT+TGG - chr3_4:67101651-67101670 Msa0515760:CDS 30.0%
AAAGAAGAGCAGTGAAAAAT+TGG - chr3_4:67101853-67101872 Msa0515760:CDS 30.0%
! ATGCTTGACTAACTTTTACT+TGG + chr3_4:67101977-67101996 None:intergenic 30.0%
! TTATCTTTTTCTGCCAATTG+TGG + chr3_4:67102880-67102899 None:intergenic 30.0%
! ACTTATCCTAAGTTCGTTTT+CGG - chr3_4:67102916-67102935 Msa0515760:intron 30.0%
! AAGTAAGTGCTTTTCTCATA+TGG + chr3_4:67103010-67103029 None:intergenic 30.0%
!!! CGTCTTTTTATTTTGTTTGC+AGG - chr3_4:67103060-67103079 Msa0515760:intron 30.0%
GTTGCCATTCTGTTAATAAT+GGG - chr3_4:67103130-67103149 Msa0515760:CDS 30.0%
! GTTAATAATGGGAACCATAA+TGG - chr3_4:67103141-67103160 Msa0515760:CDS 30.0%
ACTAATACTAATGCCCATTA+TGG + chr3_4:67103158-67103177 None:intergenic 30.0%
TGCTTTATCTTCAACTGTAA+TGG - chr3_4:67103203-67103222 Msa0515760:five_prime_UTR 30.0%
TTTATCTTCAACTGTAATGG+TGG - chr3_4:67103206-67103225 Msa0515760:five_prime_UTR 30.0%
TTATCTTCAACTGTAATGGT+GGG - chr3_4:67103207-67103226 Msa0515760:five_prime_UTR 30.0%
!!! GTTTGAGATTTGTTTTGGGA+TGG + chr3_4:67101375-67101394 None:intergenic 35.0%
GAGAGAGAAAGATATGAAGA+AGG + chr3_4:67101400-67101419 None:intergenic 35.0%
!! AGCTTTGAGAAATCAATGAC+TGG + chr3_4:67101494-67101513 None:intergenic 35.0%
AAAGCTCAATGGTGAAGAAA+GGG - chr3_4:67101508-67101527 Msa0515760:three_prime_UTR 35.0%
GCTTTACAGTTGATCAATCA+CGG - chr3_4:67101713-67101732 Msa0515760:CDS 35.0%
TTCATCTGAGTTCTATAAGC+TGG - chr3_4:67101772-67101791 Msa0515760:CDS 35.0%
! ATTCAGAAGCTTCACTGTTT+TGG + chr3_4:67101822-67101841 None:intergenic 35.0%
CAGTGAAAAATTGGAGAATG+TGG - chr3_4:67101862-67101881 Msa0515760:CDS 35.0%
AAAAATTGGAGAATGTGGAC+TGG - chr3_4:67101867-67101886 Msa0515760:CDS 35.0%
AAAATTGGAGAATGTGGACT+GGG - chr3_4:67101868-67101887 Msa0515760:CDS 35.0%
!!! CTGAAACTTGGTGTATTTTC+TGG + chr3_4:67101929-67101948 None:intergenic 35.0%
CAGAAAATACACCAAGTTTC+AGG - chr3_4:67101927-67101946 Msa0515760:CDS 35.0%
TTTCCTTTGTACCTGAAACT+TGG + chr3_4:67101941-67101960 None:intergenic 35.0%
TCATCAGAATTCAAACTTCC+TGG - chr3_4:67102124-67102143 Msa0515760:CDS 35.0%
TTATTATTTCCTCATTCGCC+AGG + chr3_4:67102145-67102164 None:intergenic 35.0%
AGTGATAACATGACATGACA+TGG - chr3_4:67102338-67102357 Msa0515760:intron 35.0%
ATGACATGACATGGCATAAT+AGG - chr3_4:67102347-67102366 Msa0515760:intron 35.0%
TGACTTCTCATATGAATGAC+AGG - chr3_4:67102395-67102414 Msa0515760:intron 35.0%
GACTTCTCATATGAATGACA+GGG - chr3_4:67102396-67102415 Msa0515760:intron 35.0%
ACCAAAAGGATACATCAAGA+AGG - chr3_4:67102498-67102517 Msa0515760:intron 35.0%
GGTTGCCATTCTGTTAATAA+TGG - chr3_4:67103129-67103148 Msa0515760:CDS 35.0%
GGTTCCCATTATTAACAGAA+TGG + chr3_4:67103137-67103156 None:intergenic 35.0%
GAGATTGTATGCATACATCT+GGG - chr3_4:67103229-67103248 Msa0515760:five_prime_UTR 35.0%
!!! GTTTGAGATTTGTTTTGGGA+TGG + chr3_4:67101375-67101394 None:intergenic 35.0%
GAGAGAGAAAGATATGAAGA+AGG + chr3_4:67101400-67101419 None:intergenic 35.0%
!! AGCTTTGAGAAATCAATGAC+TGG + chr3_4:67101494-67101513 None:intergenic 35.0%
AAAGCTCAATGGTGAAGAAA+GGG - chr3_4:67101508-67101527 Msa0515760:three_prime_UTR 35.0%
GCTTTACAGTTGATCAATCA+CGG - chr3_4:67101713-67101732 Msa0515760:CDS 35.0%
TTCATCTGAGTTCTATAAGC+TGG - chr3_4:67101772-67101791 Msa0515760:CDS 35.0%
! ATTCAGAAGCTTCACTGTTT+TGG + chr3_4:67101822-67101841 None:intergenic 35.0%
CAGTGAAAAATTGGAGAATG+TGG - chr3_4:67101862-67101881 Msa0515760:CDS 35.0%
AAAAATTGGAGAATGTGGAC+TGG - chr3_4:67101867-67101886 Msa0515760:CDS 35.0%
AAAATTGGAGAATGTGGACT+GGG - chr3_4:67101868-67101887 Msa0515760:CDS 35.0%
!!! CTGAAACTTGGTGTATTTTC+TGG + chr3_4:67101929-67101948 None:intergenic 35.0%
CAGAAAATACACCAAGTTTC+AGG - chr3_4:67101927-67101946 Msa0515760:CDS 35.0%
TTTCCTTTGTACCTGAAACT+TGG + chr3_4:67101941-67101960 None:intergenic 35.0%
TCATCAGAATTCAAACTTCC+TGG - chr3_4:67102124-67102143 Msa0515760:CDS 35.0%
TTATTATTTCCTCATTCGCC+AGG + chr3_4:67102145-67102164 None:intergenic 35.0%
AGTGATAACATGACATGACA+TGG - chr3_4:67102338-67102357 Msa0515760:intron 35.0%
ATGACATGACATGGCATAAT+AGG - chr3_4:67102347-67102366 Msa0515760:intron 35.0%
TGACTTCTCATATGAATGAC+AGG - chr3_4:67102395-67102414 Msa0515760:intron 35.0%
GACTTCTCATATGAATGACA+GGG - chr3_4:67102396-67102415 Msa0515760:intron 35.0%
ACCAAAAGGATACATCAAGA+AGG - chr3_4:67102498-67102517 Msa0515760:intron 35.0%
GGTTGCCATTCTGTTAATAA+TGG - chr3_4:67103129-67103148 Msa0515760:CDS 35.0%
GGTTCCCATTATTAACAGAA+TGG + chr3_4:67103137-67103156 None:intergenic 35.0%
GAGATTGTATGCATACATCT+GGG - chr3_4:67103229-67103248 Msa0515760:five_prime_UTR 35.0%
! GTTTGTAAGAGGTGTAGCTA+TGG + chr3_4:67101353-67101372 None:intergenic 40.0%
!!! GTTTTGGGATGGTTTGTAAG+AGG + chr3_4:67101364-67101383 None:intergenic 40.0%
CAAAGCTCAATGGTGAAGAA+AGG - chr3_4:67101507-67101526 Msa0515760:three_prime_UTR 40.0%
TGAAGAAAGGGCCAAAACTT+TGG - chr3_4:67101520-67101539 Msa0515760:three_prime_UTR 40.0%
! AGCAATCTGTGCCAAAGTTT+TGG + chr3_4:67101534-67101553 None:intergenic 40.0%
ACTTTGGCACAGATTGCTAA+TGG - chr3_4:67101536-67101555 Msa0515760:three_prime_UTR 40.0%
TTGCTAATGGCTGTGAAGAA+TGG - chr3_4:67101549-67101568 Msa0515760:three_prime_UTR 40.0%
TGCTAATGGCTGTGAAGAAT+GGG - chr3_4:67101550-67101569 Msa0515760:three_prime_UTR 40.0%
ACTTCTTGAAAGGGTGAAGA+AGG - chr3_4:67101748-67101767 Msa0515760:CDS 40.0%
GTTCTATAAGCTGGAAAGAG+AGG - chr3_4:67101781-67101800 Msa0515760:CDS 40.0%
! CTCTCTTGGATGATAACGAA+TGG - chr3_4:67101903-67101922 Msa0515760:CDS 40.0%
! ACACCAAGTTTCAGGTACAA+AGG - chr3_4:67101935-67101954 Msa0515760:CDS 40.0%
GGGAAACCATGTCAGAATAT+CGG - chr3_4:67102416-67102435 Msa0515760:intron 40.0%
TCGGTCTGAGTTAAAGAAAC+TGG - chr3_4:67102435-67102454 Msa0515760:intron 40.0%
AGTGAATCTCACAGAAGTGA+TGG - chr3_4:67102459-67102478 Msa0515760:intron 40.0%
!! AGAAGTGATGGATGAGAATC+TGG - chr3_4:67102471-67102490 Msa0515760:intron 40.0%
!! GAAGTGATGGATGAGAATCT+GGG - chr3_4:67102472-67102491 Msa0515760:intron 40.0%
! GAGAATCTGGGATTACCAAA+AGG - chr3_4:67102484-67102503 Msa0515760:intron 40.0%
! GCCTTCTTGATGTATCCTTT+TGG + chr3_4:67102502-67102521 None:intergenic 40.0%
!! ATCAAGAAGGCACTGAATGA+TGG - chr3_4:67102511-67102530 Msa0515760:intron 40.0%
GAAGGAGACAATGCTTTCTT+TGG - chr3_4:67102535-67102554 Msa0515760:intron 40.0%
!! CATTCACAAGTTCTGGATGA+GGG + chr3_4:67102588-67102607 None:intergenic 40.0%
CCTTGTCATCTTGGAATAGT+AGG + chr3_4:67102645-67102664 None:intergenic 40.0%
CCTACTATTCCAAGATGACA+AGG - chr3_4:67102642-67102661 Msa0515760:intron 40.0%
CTATTCCAAGATGACAAGGT+AGG - chr3_4:67102646-67102665 Msa0515760:intron 40.0%
GCCTTCAAATGCTCAAAGAT+GGG - chr3_4:67102671-67102690 Msa0515760:intron 40.0%
CCTTCAAATGCTCAAAGATG+GGG - chr3_4:67102672-67102691 Msa0515760:intron 40.0%
AAATGCTCAAAGATGGGGAA+TGG - chr3_4:67102677-67102696 Msa0515760:intron 40.0%
ATGACAATGGCATTTGGCAA+AGG + chr3_4:67102715-67102734 None:intergenic 40.0%
!! GTGTTGATGACAATGGCATT+TGG + chr3_4:67102721-67102740 None:intergenic 40.0%
AATGCCATTGTCATCAACAC+TGG - chr3_4:67102721-67102740 Msa0515760:CDS 40.0%
!! ATCACCAGTGTTGATGACAA+TGG + chr3_4:67102728-67102747 None:intergenic 40.0%
ATGGCAGATACAAGAGTTGT+TGG - chr3_4:67102767-67102786 Msa0515760:CDS 40.0%
ATACAAGAGTTGTTGGCACA+GGG - chr3_4:67102774-67102793 Msa0515760:CDS 40.0%
TATAAGTCCTGCACCACAAT+TGG - chr3_4:67102864-67102883 Msa0515760:CDS 40.0%
GATAAGTGTCATCAACTTGC+TGG + chr3_4:67102903-67102922 None:intergenic 40.0%
!! GCTTTAACAGCTCTAAACCT+TGG + chr3_4:67102988-67103007 None:intergenic 40.0%
GGTCTTTGTTCTGTAAGACA+TGG - chr3_4:67103081-67103100 Msa0515760:CDS 40.0%
CAGTAGCAAAGAATACCACA+TGG - chr3_4:67103108-67103127 Msa0515760:CDS 40.0%
TTAACAGAATGGCAACCATG+TGG + chr3_4:67103126-67103145 None:intergenic 40.0%
GGAGATTGTATGCATACATC+TGG - chr3_4:67103228-67103247 Msa0515760:five_prime_UTR 40.0%
! GTTTGTAAGAGGTGTAGCTA+TGG + chr3_4:67101353-67101372 None:intergenic 40.0%
!!! GTTTTGGGATGGTTTGTAAG+AGG + chr3_4:67101364-67101383 None:intergenic 40.0%
CAAAGCTCAATGGTGAAGAA+AGG - chr3_4:67101507-67101526 Msa0515760:three_prime_UTR 40.0%
TGAAGAAAGGGCCAAAACTT+TGG - chr3_4:67101520-67101539 Msa0515760:three_prime_UTR 40.0%
! AGCAATCTGTGCCAAAGTTT+TGG + chr3_4:67101534-67101553 None:intergenic 40.0%
ACTTTGGCACAGATTGCTAA+TGG - chr3_4:67101536-67101555 Msa0515760:three_prime_UTR 40.0%
TTGCTAATGGCTGTGAAGAA+TGG - chr3_4:67101549-67101568 Msa0515760:three_prime_UTR 40.0%
TGCTAATGGCTGTGAAGAAT+GGG - chr3_4:67101550-67101569 Msa0515760:three_prime_UTR 40.0%
ACTTCTTGAAAGGGTGAAGA+AGG - chr3_4:67101748-67101767 Msa0515760:CDS 40.0%
GTTCTATAAGCTGGAAAGAG+AGG - chr3_4:67101781-67101800 Msa0515760:CDS 40.0%
! CTCTCTTGGATGATAACGAA+TGG - chr3_4:67101903-67101922 Msa0515760:CDS 40.0%
! ACACCAAGTTTCAGGTACAA+AGG - chr3_4:67101935-67101954 Msa0515760:CDS 40.0%
GGGAAACCATGTCAGAATAT+CGG - chr3_4:67102416-67102435 Msa0515760:intron 40.0%
TCGGTCTGAGTTAAAGAAAC+TGG - chr3_4:67102435-67102454 Msa0515760:intron 40.0%
AGTGAATCTCACAGAAGTGA+TGG - chr3_4:67102459-67102478 Msa0515760:intron 40.0%
!! AGAAGTGATGGATGAGAATC+TGG - chr3_4:67102471-67102490 Msa0515760:intron 40.0%
!! GAAGTGATGGATGAGAATCT+GGG - chr3_4:67102472-67102491 Msa0515760:intron 40.0%
! GAGAATCTGGGATTACCAAA+AGG - chr3_4:67102484-67102503 Msa0515760:intron 40.0%
! GCCTTCTTGATGTATCCTTT+TGG + chr3_4:67102502-67102521 None:intergenic 40.0%
!! ATCAAGAAGGCACTGAATGA+TGG - chr3_4:67102511-67102530 Msa0515760:intron 40.0%
GAAGGAGACAATGCTTTCTT+TGG - chr3_4:67102535-67102554 Msa0515760:intron 40.0%
!! CATTCACAAGTTCTGGATGA+GGG + chr3_4:67102588-67102607 None:intergenic 40.0%
CCTTGTCATCTTGGAATAGT+AGG + chr3_4:67102645-67102664 None:intergenic 40.0%
CCTACTATTCCAAGATGACA+AGG - chr3_4:67102642-67102661 Msa0515760:intron 40.0%
CTATTCCAAGATGACAAGGT+AGG - chr3_4:67102646-67102665 Msa0515760:intron 40.0%
GCCTTCAAATGCTCAAAGAT+GGG - chr3_4:67102671-67102690 Msa0515760:intron 40.0%
CCTTCAAATGCTCAAAGATG+GGG - chr3_4:67102672-67102691 Msa0515760:intron 40.0%
AAATGCTCAAAGATGGGGAA+TGG - chr3_4:67102677-67102696 Msa0515760:intron 40.0%
ATGACAATGGCATTTGGCAA+AGG + chr3_4:67102715-67102734 None:intergenic 40.0%
!! GTGTTGATGACAATGGCATT+TGG + chr3_4:67102721-67102740 None:intergenic 40.0%
AATGCCATTGTCATCAACAC+TGG - chr3_4:67102721-67102740 Msa0515760:CDS 40.0%
!! ATCACCAGTGTTGATGACAA+TGG + chr3_4:67102728-67102747 None:intergenic 40.0%
ATGGCAGATACAAGAGTTGT+TGG - chr3_4:67102767-67102786 Msa0515760:CDS 40.0%
ATACAAGAGTTGTTGGCACA+GGG - chr3_4:67102774-67102793 Msa0515760:CDS 40.0%
TATAAGTCCTGCACCACAAT+TGG - chr3_4:67102864-67102883 Msa0515760:CDS 40.0%
GATAAGTGTCATCAACTTGC+TGG + chr3_4:67102903-67102922 None:intergenic 40.0%
!! GCTTTAACAGCTCTAAACCT+TGG + chr3_4:67102988-67103007 None:intergenic 40.0%
GGTCTTTGTTCTGTAAGACA+TGG - chr3_4:67103081-67103100 Msa0515760:CDS 40.0%
CAGTAGCAAAGAATACCACA+TGG - chr3_4:67103108-67103127 Msa0515760:CDS 40.0%
TTAACAGAATGGCAACCATG+TGG + chr3_4:67103126-67103145 None:intergenic 40.0%
GGAGATTGTATGCATACATC+TGG - chr3_4:67103228-67103247 Msa0515760:five_prime_UTR 40.0%
GCTAATGGCTGTGAAGAATG+GGG - chr3_4:67101551-67101570 Msa0515760:three_prime_UTR 45.0%
TGAAGAATGGGGATTCTTCC+AGG - chr3_4:67101562-67101581 Msa0515760:three_prime_UTR 45.0%
GTTGATCAATCACGGCATTC+CGG - chr3_4:67101721-67101740 Msa0515760:CDS 45.0%
TTCCGGAGGAACTTCTTGAA+AGG - chr3_4:67101738-67101757 Msa0515760:CDS 45.0%
TCCGGAGGAACTTCTTGAAA+GGG - chr3_4:67101739-67101758 Msa0515760:CDS 45.0%
ACCCTTTCAAGAAGTTCCTC+CGG + chr3_4:67101743-67101762 None:intergenic 45.0%
GGAGGATGTTATCACTCTCT+TGG - chr3_4:67101889-67101908 Msa0515760:CDS 45.0%
AGTATGCATGAGATGACAGG+TGG + chr3_4:67102019-67102038 None:intergenic 45.0%
! GAGAGTATGCATGAGATGAC+AGG + chr3_4:67102022-67102041 None:intergenic 45.0%
TTCAAACTTCCTGGCGAATG+AGG - chr3_4:67102133-67102152 Msa0515760:CDS 45.0%
CTCAGACCGATATTCTGACA+TGG + chr3_4:67102425-67102444 None:intergenic 45.0%
!! AAGGCACTGAATGATGGAGA+AGG - chr3_4:67102517-67102536 Msa0515760:intron 45.0%
CAATGCTTTCTTTGGCACCA+AGG - chr3_4:67102543-67102562 Msa0515760:intron 45.0%
!! CCATTCACAAGTTCTGGATG+AGG + chr3_4:67102589-67102608 None:intergenic 45.0%
CCTCATCCAGAACTTGTGAA+TGG - chr3_4:67102586-67102605 Msa0515760:intron 45.0%
TTCCAAGATGACAAGGTAGG+TGG - chr3_4:67102649-67102668 Msa0515760:intron 45.0%
GGCCTTCAAATGCTCAAAGA+TGG - chr3_4:67102670-67102689 Msa0515760:intron 45.0%
CCCCATCTTTGAGCATTTGA+AGG + chr3_4:67102675-67102694 None:intergenic 45.0%
CAATGGCATTTGGCAAAGGT+TGG + chr3_4:67102711-67102730 None:intergenic 45.0%
CAGATTGAAGTCCTGAGCAA+TGG - chr3_4:67102748-67102767 Msa0515760:CDS 45.0%
TCTTGTATCTGCCATTGCTC+AGG + chr3_4:67102762-67102781 None:intergenic 45.0%
GATACAAGAGTTGTTGGCAC+AGG - chr3_4:67102773-67102792 Msa0515760:CDS 45.0%
GAAGGATGCAATTGATCTCC+TGG + chr3_4:67102821-67102840 None:intergenic 45.0%
AGGACTTATAGTGGCCTTCA+GGG + chr3_4:67102854-67102873 None:intergenic 45.0%
TTGTGGTGCAGGACTTATAG+TGG + chr3_4:67102863-67102882 None:intergenic 45.0%
! TTTTCTGCCAATTGTGGTGC+AGG + chr3_4:67102874-67102893 None:intergenic 45.0%
TAGTCGCCGAAAACGAACTT+AGG + chr3_4:67102925-67102944 None:intergenic 45.0%
CTCTAAACCTTGGTTCCTTG+GGG + chr3_4:67102978-67102997 None:intergenic 45.0%
! GCTCTAAACCTTGGTTCCTT+GGG + chr3_4:67102979-67102998 None:intergenic 45.0%
!! AGCTCTAAACCTTGGTTCCT+TGG + chr3_4:67102980-67102999 None:intergenic 45.0%
GCTAATGGCTGTGAAGAATG+GGG - chr3_4:67101551-67101570 Msa0515760:three_prime_UTR 45.0%
TGAAGAATGGGGATTCTTCC+AGG - chr3_4:67101562-67101581 Msa0515760:three_prime_UTR 45.0%
GTTGATCAATCACGGCATTC+CGG - chr3_4:67101721-67101740 Msa0515760:CDS 45.0%
TTCCGGAGGAACTTCTTGAA+AGG - chr3_4:67101738-67101757 Msa0515760:CDS 45.0%
TCCGGAGGAACTTCTTGAAA+GGG - chr3_4:67101739-67101758 Msa0515760:CDS 45.0%
ACCCTTTCAAGAAGTTCCTC+CGG + chr3_4:67101743-67101762 None:intergenic 45.0%
GGAGGATGTTATCACTCTCT+TGG - chr3_4:67101889-67101908 Msa0515760:CDS 45.0%
AGTATGCATGAGATGACAGG+TGG + chr3_4:67102019-67102038 None:intergenic 45.0%
! GAGAGTATGCATGAGATGAC+AGG + chr3_4:67102022-67102041 None:intergenic 45.0%
TTCAAACTTCCTGGCGAATG+AGG - chr3_4:67102133-67102152 Msa0515760:CDS 45.0%
CTCAGACCGATATTCTGACA+TGG + chr3_4:67102425-67102444 None:intergenic 45.0%
!! AAGGCACTGAATGATGGAGA+AGG - chr3_4:67102517-67102536 Msa0515760:intron 45.0%
CAATGCTTTCTTTGGCACCA+AGG - chr3_4:67102543-67102562 Msa0515760:intron 45.0%
!! CCATTCACAAGTTCTGGATG+AGG + chr3_4:67102589-67102608 None:intergenic 45.0%
CCTCATCCAGAACTTGTGAA+TGG - chr3_4:67102586-67102605 Msa0515760:intron 45.0%
TTCCAAGATGACAAGGTAGG+TGG - chr3_4:67102649-67102668 Msa0515760:intron 45.0%
GGCCTTCAAATGCTCAAAGA+TGG - chr3_4:67102670-67102689 Msa0515760:intron 45.0%
CCCCATCTTTGAGCATTTGA+AGG + chr3_4:67102675-67102694 None:intergenic 45.0%
CAATGGCATTTGGCAAAGGT+TGG + chr3_4:67102711-67102730 None:intergenic 45.0%
CAGATTGAAGTCCTGAGCAA+TGG - chr3_4:67102748-67102767 Msa0515760:CDS 45.0%
TCTTGTATCTGCCATTGCTC+AGG + chr3_4:67102762-67102781 None:intergenic 45.0%
GATACAAGAGTTGTTGGCAC+AGG - chr3_4:67102773-67102792 Msa0515760:CDS 45.0%
GAAGGATGCAATTGATCTCC+TGG + chr3_4:67102821-67102840 None:intergenic 45.0%
AGGACTTATAGTGGCCTTCA+GGG + chr3_4:67102854-67102873 None:intergenic 45.0%
TTGTGGTGCAGGACTTATAG+TGG + chr3_4:67102863-67102882 None:intergenic 45.0%
! TTTTCTGCCAATTGTGGTGC+AGG + chr3_4:67102874-67102893 None:intergenic 45.0%
TAGTCGCCGAAAACGAACTT+AGG + chr3_4:67102925-67102944 None:intergenic 45.0%
CTCTAAACCTTGGTTCCTTG+GGG + chr3_4:67102978-67102997 None:intergenic 45.0%
! GCTCTAAACCTTGGTTCCTT+GGG + chr3_4:67102979-67102998 None:intergenic 45.0%
!! AGCTCTAAACCTTGGTTCCT+TGG + chr3_4:67102980-67102999 None:intergenic 45.0%
!! CTTAATTATTATTATTTATT+GGG + chr3_4:67102196-67102215 None:intergenic 5.0%
!! ACTTAATTATTATTATTTAT+TGG + chr3_4:67102197-67102216 None:intergenic 5.0%
!! CTTAATTATTATTATTTATT+GGG + chr3_4:67102196-67102215 None:intergenic 5.0%
!! ACTTAATTATTATTATTTAT+TGG + chr3_4:67102197-67102216 None:intergenic 5.0%
TCAATGACTGGCACTGCCAT+TGG + chr3_4:67101482-67101501 None:intergenic 50.0%
!! ATTGGAGAATGTGGACTGGG+AGG - chr3_4:67101871-67101890 Msa0515760:CDS 50.0%
!! ACAAGTTCTGGATGAGGGCA+GGG + chr3_4:67102583-67102602 None:intergenic 50.0%
CGGAGACCATTCACAAGTTC+TGG + chr3_4:67102595-67102614 None:intergenic 50.0%
CTCCTGCATCTGTATGAGCT+CGG + chr3_4:67102615-67102634 None:intergenic 50.0%
!! CTTCAGGGGTGGGTTATAGA+AGG + chr3_4:67102839-67102858 None:intergenic 50.0%
CTTCTATAACCCACCCCTGA+AGG - chr3_4:67102837-67102856 Msa0515760:CDS 50.0%
TTATAGTGGCCTTCAGGGGT+GGG + chr3_4:67102849-67102868 None:intergenic 50.0%
GGACTTATAGTGGCCTTCAG+GGG + chr3_4:67102853-67102872 None:intergenic 50.0%
CAGGACTTATAGTGGCCTTC+AGG + chr3_4:67102855-67102874 None:intergenic 50.0%
TAAACCTTGGTTCCTTGGGG+AGG + chr3_4:67102975-67102994 None:intergenic 50.0%
TCAATGACTGGCACTGCCAT+TGG + chr3_4:67101482-67101501 None:intergenic 50.0%
!! ATTGGAGAATGTGGACTGGG+AGG - chr3_4:67101871-67101890 Msa0515760:CDS 50.0%
!! ACAAGTTCTGGATGAGGGCA+GGG + chr3_4:67102583-67102602 None:intergenic 50.0%
CGGAGACCATTCACAAGTTC+TGG + chr3_4:67102595-67102614 None:intergenic 50.0%
CTCCTGCATCTGTATGAGCT+CGG + chr3_4:67102615-67102634 None:intergenic 50.0%
!! CTTCAGGGGTGGGTTATAGA+AGG + chr3_4:67102839-67102858 None:intergenic 50.0%
CTTCTATAACCCACCCCTGA+AGG - chr3_4:67102837-67102856 Msa0515760:CDS 50.0%
TTATAGTGGCCTTCAGGGGT+GGG + chr3_4:67102849-67102868 None:intergenic 50.0%
GGACTTATAGTGGCCTTCAG+GGG + chr3_4:67102853-67102872 None:intergenic 50.0%
CAGGACTTATAGTGGCCTTC+AGG + chr3_4:67102855-67102874 None:intergenic 50.0%
TAAACCTTGGTTCCTTGGGG+AGG + chr3_4:67102975-67102994 None:intergenic 50.0%
GATCAATCACGGCATTCCGG+AGG - chr3_4:67101724-67101743 Msa0515760:CDS 55.0%
!! CACAAGTTCTGGATGAGGGC+AGG + chr3_4:67102584-67102603 None:intergenic 55.0%
CTCCGAGCTCATACAGATGC+AGG - chr3_4:67102610-67102629 Msa0515760:intron 55.0%
CGAGCTCATACAGATGCAGG+AGG - chr3_4:67102613-67102632 Msa0515760:intron 55.0%
GGCCACCTACCTTGTCATCT+TGG + chr3_4:67102654-67102673 None:intergenic 55.0%
! GCACAGGGTTCTGACCTCTA+CGG - chr3_4:67102789-67102808 Msa0515760:CDS 55.0%
! AGGGTTCTGACCTCTACGGA+GGG - chr3_4:67102793-67102812 Msa0515760:CDS 55.0%
CTTATAGTGGCCTTCAGGGG+TGG + chr3_4:67102850-67102869 None:intergenic 55.0%
TGAGCAGAAGTTCCTCCCCA+AGG - chr3_4:67102960-67102979 Msa0515760:intron 55.0%
AGTTCCTCCCCAAGGAACCA+AGG - chr3_4:67102968-67102987 Msa0515760:intron 55.0%
GATCAATCACGGCATTCCGG+AGG - chr3_4:67101724-67101743 Msa0515760:CDS 55.0%
!! CACAAGTTCTGGATGAGGGC+AGG + chr3_4:67102584-67102603 None:intergenic 55.0%
CTCCGAGCTCATACAGATGC+AGG - chr3_4:67102610-67102629 Msa0515760:intron 55.0%
CGAGCTCATACAGATGCAGG+AGG - chr3_4:67102613-67102632 Msa0515760:intron 55.0%
GGCCACCTACCTTGTCATCT+TGG + chr3_4:67102654-67102673 None:intergenic 55.0%
! GCACAGGGTTCTGACCTCTA+CGG - chr3_4:67102789-67102808 Msa0515760:CDS 55.0%
! AGGGTTCTGACCTCTACGGA+GGG - chr3_4:67102793-67102812 Msa0515760:CDS 55.0%
CTTATAGTGGCCTTCAGGGG+TGG + chr3_4:67102850-67102869 None:intergenic 55.0%
TGAGCAGAAGTTCCTCCCCA+AGG - chr3_4:67102960-67102979 Msa0515760:intron 55.0%
AGTTCCTCCCCAAGGAACCA+AGG - chr3_4:67102968-67102987 Msa0515760:intron 55.0%
! GTTCTGGATGAGGGCAGGGT+GGG + chr3_4:67102579-67102598 None:intergenic 60.0%
!! AGTTCTGGATGAGGGCAGGG+TGG + chr3_4:67102580-67102599 None:intergenic 60.0%
! CAGGGTTCTGACCTCTACGG+AGG - chr3_4:67102792-67102811 Msa0515760:CDS 60.0%
!! TGACCTCTACGGAGGGTACC+AGG - chr3_4:67102800-67102819 Msa0515760:CDS 60.0%
TCTCCTGGTACCCTCCGTAG+AGG + chr3_4:67102806-67102825 None:intergenic 60.0%
! GTTCTGGATGAGGGCAGGGT+GGG + chr3_4:67102579-67102598 None:intergenic 60.0%
!! AGTTCTGGATGAGGGCAGGG+TGG + chr3_4:67102580-67102599 None:intergenic 60.0%
! CAGGGTTCTGACCTCTACGG+AGG - chr3_4:67102792-67102811 Msa0515760:CDS 60.0%
!! TGACCTCTACGGAGGGTACC+AGG - chr3_4:67102800-67102819 Msa0515760:CDS 60.0%
TCTCCTGGTACCCTCCGTAG+AGG + chr3_4:67102806-67102825 None:intergenic 60.0%
! GGGTGGGTAGTGGCTGACCT+TGG + chr3_4:67102563-67102582 None:intergenic 65.0%
GATGAGGGCAGGGTGGGTAG+TGG + chr3_4:67102573-67102592 None:intergenic 65.0%
! GGGTGGGTAGTGGCTGACCT+TGG + chr3_4:67102563-67102582 None:intergenic 65.0%
GATGAGGGCAGGGTGGGTAG+TGG + chr3_4:67102573-67102592 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 67101345 67103306 67101345 ID=Msa0515760;Name=Msa0515760
chr3_4 mRNA 67101345 67103306 67101345 ID=Msa0515760-mRNA-1;Parent=Msa0515760;Name=Msa0515760-mRNA-1;_AED=0.05;_eAED=0.05;_QI=137|1|1|1|1|1|3|292|308
chr3_4 exon 67101345 67102234 67101345 ID=Msa0515760-mRNA-1:exon:17467;Parent=Msa0515760-mRNA-1
chr3_4 exon 67102703 67102929 67102703 ID=Msa0515760-mRNA-1:exon:17466;Parent=Msa0515760-mRNA-1
chr3_4 exon 67103068 67103306 67103068 ID=Msa0515760-mRNA-1:exon:17465;Parent=Msa0515760-mRNA-1
chr3_4 five_prime_UTR 67103170 67103306 67103170 ID=Msa0515760-mRNA-1:five_prime_utr;Parent=Msa0515760-mRNA-1
chr3_4 CDS 67103068 67103169 67103068 ID=Msa0515760-mRNA-1:cds;Parent=Msa0515760-mRNA-1
chr3_4 CDS 67102703 67102929 67102703 ID=Msa0515760-mRNA-1:cds;Parent=Msa0515760-mRNA-1
chr3_4 CDS 67101637 67102234 67101637 ID=Msa0515760-mRNA-1:cds;Parent=Msa0515760-mRNA-1
chr3_4 three_prime_UTR 67101345 67101636 67101345 ID=Msa0515760-mRNA-1:three_prime_utr;Parent=Msa0515760-mRNA-1
Gene Sequence

>Msa0515760

ATGGCAGTGCCAGTCATTGATTTCTCAAAGCTCAATGGTGAAGAAAGGGCCAAAACTTTGGCACAGATTGCTAATGGCTGTGAAGAATGGGGATTCTTCCAGTTGATCAATCACGGCATTCCGGAGGAACTTCTTGAAAGGGTGAAGAAGGTTTCATCTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAAAACTCCAAAACAGTGAAGCTTCTGAATGATATAGCTGAAAAGAAGAGCAGTGAAAAATTGGAGAATGTGGACTGGGAGGATGTTATCACTCTCTTGGATGATAACGAATGGCCAGAAAATACACCAAGTTTCAGGGAAACCATGTCAGAATATCGGTCTGAGTTAAAGAAACTGGCAGTGAATCTCACAGAAGTGATGGATGAGAATCTGGGATTACCAAAAGGATACATCAAGAAGGCACTGAATGATGGAGAAGGAGACAATGCTTTCTTTGGCACCAAGGTCAGCCACTACCCACCCTGCCCTCATCCAGAACTTGTGAATGGTCTCCGAGCTCATACAGATGCAGGAGGTGTCATCCTACTATTCCAAGATGACAAGGTAGGTGGCCTTCAAATGCTCAAAGATGGGGAATGGCTTGATGTCCAACCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAAGTCCTGAGCAATGGCAGATACAAGAGTTGTTGGCACAGGGTTCTGACCTCTACGGAGGGTACCAGGAGATCAATTGCATCCTTCTATAACCCACCCCTGAAGGCCACTATAAGTCCTGCACCACAATTGGCAGAAAAAGATAACCAGCAAGTTGATGACACTTATCCTAAGTTCGTTTTCGGCGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTCCCCAAGGAACCAAGGTTTAGAGCTGTTAAAGCCATATGA
Protein sequence

>Msa0515760

MAVPVIDFSKLNGEERAKTLAQIANGCEEWGFFQLINHGIPEELLERVKKVSSEFYKLEREENFKNSKTVKLLNDIAEKKSSEKLENVDWEDVITLLDDNEWPENTPSFRETMSEYRSELKKLAVNLTEVMDENLGLPKGYIKKALNDGEGDNAFFGTKVSHYPPCPHPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWLDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLTSTEGTRRSIASFYNPPLKATISPAPQLAEKDNQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVKAI*