AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0973770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0973770 MtrunA17_Chr6g0452711 94.953 634 6 2 1 608 1 634 0.0 1226
Msa0973770 MtrunA17_Chr7g0216471 84.724 635 63 5 7 608 13 646 0.0 1079
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0973770 AT3G01310.2 81.388 634 89 4 4 608 10 643 0.0 1060
Msa0973770 AT5G15070.3 80.854 632 93 4 4 608 9 639 0.0 1056
Msa0973770 AT5G15070.2 80.854 632 93 4 4 608 9 639 0.0 1056
Msa0973770 AT5G15070.1 80.854 632 93 4 4 608 9 639 0.0 1055
Msa0973770 AT5G15070.4 80.854 632 93 4 4 608 9 639 0.0 1055
Msa0973770 AT3G01310.1 80.625 640 89 5 4 608 10 649 0.0 1054
Msa0973770 AT5G15070.5 80.094 638 93 5 4 608 9 645 0.0 1048
Msa0973770 AT3G01310.3 81.107 614 87 4 24 608 1 614 0.0 1023
Msa0973770 AT5G15070.7 77.694 399 61 4 237 608 1 398 0.0 619
Msa0973770 AT5G15070.6 77.694 399 61 4 237 608 1 398 0.0 619

Find 173 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATATAGGTCATACATTT+TGG 0.099783 6_4:-6483405 Msa0973770:intron
AGTGGTATTAATGGATATTT+TGG 0.157435 6_4:-6477749 Msa0973770:CDS
CAAGATATGCCCTTGTAATT+AGG 0.166669 6_4:-6481643 Msa0973770:CDS
CCGAGGCATATGCTGCTTTA+AGG 0.174111 6_4:-6483071 Msa0973770:CDS
TTGATTGCTTTCTATTCTTC+TGG 0.186777 6_4:-6483111 Msa0973770:CDS
TAAACAGAAGGTGAAGTTAA+AGG 0.270748 6_4:-6477595 Msa0973770:CDS
GCTCTTATGATTCTTAAATA+TGG 0.272382 6_4:-6475960 Msa0973770:CDS
TTTAACTTCACCTTCTGTTT+AGG 0.284451 6_4:+6477597 None:intergenic
AAGATATGCCCTTGTAATTA+GGG 0.286041 6_4:-6481642 Msa0973770:CDS
CATACCTCCACCTGCTGAAC+TGG 0.301055 6_4:+6480533 None:intergenic
CGTCAGGGTAGTGGTATTAA+TGG 0.305629 6_4:-6477758 Msa0973770:CDS
CTTTCTTTCTTTCAGTCAAA+TGG 0.310441 6_4:+6484796 None:intergenic
ACCTTTCCTCATAAATGAAT+TGG 0.319252 6_4:-6482047 Msa0973770:CDS
GTCACTTTGACCCACTTTAG+TGG 0.321577 6_4:+6476020 None:intergenic
CAAAATCGGCGTCTGTGTTA+TGG 0.324560 6_4:-6484617 Msa0973770:CDS
CTTTCTGCCTGCAGGTTTGT+GGG 0.324732 6_4:-6478345 Msa0973770:intron
AAGTTGATGGCATGCGCTTT+TGG 0.343122 6_4:-6481568 Msa0973770:CDS
GAACTATTGTACCTCTCTAT+TGG 0.345452 6_4:+6483360 None:intergenic
TTGGTGTTAGCTGCCCTTCT+AGG 0.347012 6_4:+6475018 None:intergenic
GAGGTATGAAGGAATTATTT+AGG 0.352788 6_4:-6480518 Msa0973770:CDS
TTTGATAGGTTACAAGCGTT+TGG 0.354893 6_4:-6483851 Msa0973770:CDS
TCGGTCATGAAGAAGGTATT+GGG 0.355330 6_4:+6482021 None:intergenic
GACATTTCTCCGGCATTTAT+AGG 0.359699 6_4:-6476058 Msa0973770:CDS
GCCTCAGCATGAGCATATTC+AGG 0.364247 6_4:+6479765 None:intergenic
TCTTTCTGCCTGCAGGTTTG+TGG 0.369423 6_4:-6478346 Msa0973770:intron
CCACTTACTTCCTTCCCATC+AGG 0.372633 6_4:+6479702 None:intergenic
AGCAATCAAACAATCACATA+TGG 0.378798 6_4:+6483125 None:intergenic
ATGAGCGTCCCTCACTTCTA+AGG 0.379479 6_4:+6478314 None:intergenic
CATAAATTCCTCATATATAT+AGG 0.379508 6_4:+6479922 None:intergenic
CTAATTACAAGGGCATATCT+TGG 0.380113 6_4:+6481644 None:intergenic
TTCAAGCAACTTGAACTGTT+TGG 0.385560 6_4:-6481677 Msa0973770:intron
GAATTTCCTTGGACGGTTGA+TGG 0.387284 6_4:-6473832 Msa0973770:CDS
AGCTTAATAATGAAATATAA+TGG 0.393243 6_4:-6477552 Msa0973770:CDS
ACAAGGGCATATCTTGGAAC+AGG 0.398330 6_4:+6481650 None:intergenic
GGGGCTCCAATTCATTTATG+AGG 0.398776 6_4:+6482041 None:intergenic
CATCAGAACTGTAAATCTTA+AGG 0.399203 6_4:+6475193 None:intergenic
AATTTCCTTGGACGGTTGAT+GGG 0.403927 6_4:-6473831 Msa0973770:CDS
TTCTAGGTCGAGAAGACCTT+TGG 0.404504 6_4:+6475034 None:intergenic
AAAGGTCTTCTCGACCTAGA+AGG 0.406857 6_4:-6475032 Msa0973770:CDS
TATTATCATAGGTTGGTAAT+AGG 0.408463 6_4:-6479991 Msa0973770:intron
GGTCATGGCGGTATGTACTA+TGG 0.413666 6_4:+6475214 None:intergenic
TTCGGTCATGAAGAAGGTAT+TGG 0.414697 6_4:+6482020 None:intergenic
TTCAATTAAAGCCACTAAAG+TGG 0.417764 6_4:-6476031 Msa0973770:CDS
TTTACTTTCCATGGTAAAGT+AGG 0.418957 6_4:+6477809 None:intergenic
ACCTTCTGAACTAACTCGTC+AGG 0.420897 6_4:-6477774 Msa0973770:CDS
AAAATATCTTCCCAGTTCTT+CGG 0.423233 6_4:+6475753 None:intergenic
ATTATCTCATTTACTTTCCA+TGG 0.431901 6_4:+6477800 None:intergenic
TTTGTAGAGAAGCCTATTGA+TGG 0.431905 6_4:-6481539 Msa0973770:intron
TGAAAATGCACATACTGAAA+TGG 0.432024 6_4:-6474865 Msa0973770:CDS
CCTTGGACGGTTGATGGGGC+TGG 0.439573 6_4:-6473826 Msa0973770:CDS
AATAAAGTAATCAAGTTCTT+CGG 0.449526 6_4:+6481610 None:intergenic
GAAACAAGCTTACCATCAAT+AGG 0.454003 6_4:+6481527 None:intergenic
AACAGAGTTACCTCAGATCT+TGG 0.456773 6_4:+6477522 None:intergenic
ATGGATCACATGAATTTCCT+TGG 0.459333 6_4:-6473843 Msa0973770:CDS
AACCGGAGGGACAGATGTTA+AGG 0.462612 6_4:-6479897 Msa0973770:intron
ATTACAGAGAAAATCAAAAT+CGG 0.462826 6_4:-6484631 Msa0973770:CDS
CACTTACTTCCTTCCCATCA+GGG 0.466683 6_4:+6479703 None:intergenic
CTTTCCTTCGGTCATGAAGA+AGG 0.466864 6_4:+6482014 None:intergenic
AGGAAGTAATTCCGATGCAT+TGG 0.468889 6_4:+6473795 None:intergenic
CTATGGGACAGATATTTGAT+AGG 0.470709 6_4:-6483865 Msa0973770:CDS
TCAATAGGCTTCTCTACAAA+TGG 0.471421 6_4:+6481542 None:intergenic
TCACTCTTCGCACCTCTGAA+TGG 0.473776 6_4:+6479957 None:intergenic
AGAACTTGATTACTTTATTG+AGG 0.476721 6_4:-6481606 Msa0973770:CDS
AGGAAGTCTCCTGTTGTTGA+TGG 0.477465 6_4:-6479741 Msa0973770:CDS
TATGAGGAATTTATGCCAAC+CGG 0.478619 6_4:-6479914 Msa0973770:CDS
GGAAGTAATTCCGATGCATT+GGG 0.479744 6_4:+6473796 None:intergenic
TTCTGATGAGGGTCGTGTGC+AGG 0.485973 6_4:-6475178 Msa0973770:intron
TTTCGAAATAAAATATATCC+AGG 0.488886 6_4:-6475733 Msa0973770:intron
TTACCTCATATACTTTCCTT+CGG 0.492823 6_4:+6482002 None:intergenic
AGAATCATAAGAGCTTCAAC+TGG 0.493253 6_4:+6475969 None:intergenic
ATATATTATCCCAGTTCAGC+AGG 0.498669 6_4:-6480543 Msa0973770:CDS
TACACATGCTGGCAGAAAGC+AGG 0.499812 6_4:-6475928 Msa0973770:intron
AGGGCAGCTAACACCAATCC+TGG 0.503084 6_4:-6475012 Msa0973770:intron
TTCAGCAGGTGGAGGTATGA+AGG 0.503124 6_4:-6480529 Msa0973770:CDS
TTGAACCTTCCTATAAATGC+CGG 0.504915 6_4:+6476049 None:intergenic
GCTCTCAACTGTGTTTGCAC+TGG 0.505777 6_4:+6473867 None:intergenic
AAAGGTTTCCCTTGTTAGCA+AGG 0.506425 6_4:-6474910 Msa0973770:intron
ATAACAACACCATCAACAAC+AGG 0.507139 6_4:+6479732 None:intergenic
CTCAACTGTGTTTGCACTGG+AGG 0.509783 6_4:+6473870 None:intergenic
TCCAATTCATTTATGAGGAA+AGG 0.510012 6_4:+6482046 None:intergenic
GACCTTAACATCTGTCCCTC+CGG 0.512577 6_4:+6479895 None:intergenic
ATCGGAATTACTTCCTGAGT+TGG 0.513071 6_4:-6473788 Msa0973770:CDS
TTATTTAGACAAGATCTAGA+AGG 0.513786 6_4:-6476873 Msa0973770:intron
TACTAGGGAGGACATTTCTC+CGG 0.517554 6_4:-6476068 Msa0973770:intron
GTTAGATGCCACACGAATGC+TGG 0.522288 6_4:-6477375 Msa0973770:CDS
TAAGATTTACAGTTCTGATG+AGG 0.525315 6_4:-6475190 Msa0973770:CDS
AATATTGCAGGAGAAGGTAC+GGG 0.526195 6_4:-6475249 Msa0973770:intron
TAATATTGCAGGAGAAGGTA+CGG 0.527340 6_4:-6475250 Msa0973770:intron
TTTCTCCGGCATTTATAGGA+AGG 0.529884 6_4:-6476054 Msa0973770:CDS
ACGGGACTTCCCTAATTACA+AGG 0.530050 6_4:+6481633 None:intergenic
TATGAAGGAATTATTTAGGA+AGG 0.530587 6_4:-6480514 Msa0973770:intron
GGAAATGATACGGTTTATAA+CGG 0.533207 6_4:+6484852 None:intergenic
TTCTGGATATCCCCTCGAAA+AGG 0.534391 6_4:-6483094 Msa0973770:CDS
AGGACTCCTCCATGTTGGAC+GGG 0.535967 6_4:-6474890 Msa0973770:CDS
CTATCAAATATCTGTCCCAT+AGG 0.538643 6_4:+6483866 None:intergenic
TGAAGGCTCCTATATATATG+AGG 0.540487 6_4:-6479930 Msa0973770:CDS
GCAATCAAACAATCACATAT+GGG 0.541893 6_4:+6483126 None:intergenic
ACTTTCCATGGTAAAGTAGG+TGG 0.542437 6_4:+6477812 None:intergenic
AAGATTTACAGTTCTGATGA+GGG 0.543039 6_4:-6475189 Msa0973770:CDS
GAACTAACTCGTCAGGGTAG+TGG 0.544011 6_4:-6477767 Msa0973770:CDS
ATCACATGAATTTCCTTGGA+CGG 0.544029 6_4:-6473839 Msa0973770:CDS
TCATATGTTTGTGATGTGAA+TGG 0.545529 6_4:-6478295 Msa0973770:CDS
CGTCTGTGTTATGGAAAAGA+AGG 0.546814 6_4:-6484608 Msa0973770:intron
TACTGAAATGGAAGAAGCCA+AGG 0.546851 6_4:-6474853 Msa0973770:intron
TGACCGAAGGAAAGTATATG+AGG 0.549736 6_4:-6482005 Msa0973770:intron
CCCTGACGAGTTAGTTCAGA+AGG 0.550673 6_4:+6477773 None:intergenic
CTGTAAGAAGAAGAAGATCA+TGG 0.555301 6_4:-6484659 Msa0973770:exon
ATTTACAGACTTACCAACTC+AGG 0.555866 6_4:+6473775 None:intergenic
GTGCGAAGAGTGAGGCGTGA+AGG 0.556482 6_4:-6479947 Msa0973770:CDS
CACCTCTGAATGGAACTCAC+TGG 0.557804 6_4:+6479967 None:intergenic
AACTGTAAATCTTAAGGTCA+TGG 0.558262 6_4:+6475199 None:intergenic
TGGAGGAGTCCTTGCTAACA+AGG 0.560122 6_4:+6474901 None:intergenic
AAGGTCTTCTCGACCTAGAA+GGG 0.562881 6_4:-6475031 Msa0973770:CDS
AGTAATCAAGTTCTTCGGAC+GGG 0.564421 6_4:+6481615 None:intergenic
CCAGCCCCATCAACCGTCCA+AGG 0.564825 6_4:+6473826 None:intergenic
CTTATGATTCTTAAATATGG+TGG 0.570470 6_4:-6475957 Msa0973770:CDS
GGTGAAGTTAAAGGTTACTG+AGG 0.576585 6_4:-6477586 Msa0973770:CDS
AGCGAGTAACGGAAATGATA+CGG 0.576703 6_4:+6484842 None:intergenic
TTTGATCTCCTTAGAAGTGA+GGG 0.578677 6_4:-6478322 Msa0973770:CDS
AGTTAAAGCTGTTCTTGAGG+AGG 0.578864 6_4:-6476805 Msa0973770:intron
ATACCTCCACCTGCTGAACT+GGG 0.579635 6_4:+6480534 None:intergenic
TGGAATTCCACCCAATGCAT+CGG 0.579808 6_4:-6473806 Msa0973770:CDS
TTAACATCTGTCCCTCCGGT+TGG 0.580801 6_4:+6479899 None:intergenic
TCAATTAAAGCCACTAAAGT+GGG 0.582647 6_4:-6476030 Msa0973770:CDS
AAGGACTCCTCCATGTTGGA+CGG 0.584996 6_4:-6474891 Msa0973770:CDS
TCAAGTTAAAGCTGTTCTTG+AGG 0.590373 6_4:-6476808 Msa0973770:CDS
TAGCAAGGACTCCTCCATGT+TGG 0.590421 6_4:-6474895 Msa0973770:CDS
GCAAACACAGTTGAGAGCAA+TGG 0.590940 6_4:-6473862 Msa0973770:CDS
TATCCCAGTTCAGCAGGTGG+AGG 0.592221 6_4:-6480537 Msa0973770:CDS
TATGAGAAACCCTGATGGGA+AGG 0.592578 6_4:-6479712 Msa0973770:CDS
CCTTAAAGCAGCATATGCCT+CGG 0.593829 6_4:+6483071 None:intergenic
ATGTTTGTGATGTGAATGGT+TGG 0.595992 6_4:-6478291 Msa0973770:CDS
AAGTAATCAAGTTCTTCGGA+CGG 0.599648 6_4:+6481614 None:intergenic
TGACTGTAGGTGTATACAGT+AGG 0.600209 6_4:-6479789 Msa0973770:intron
GGTGGTGTTCTTACACATGC+TGG 0.604753 6_4:-6475939 Msa0973770:CDS
AATATGCTCATGCTGAGGCA+AGG 0.605353 6_4:-6479761 Msa0973770:CDS
CGATTCCACCTACTTTACCA+TGG 0.609680 6_4:-6477817 Msa0973770:CDS
CAAGGGCATATCTTGGAACA+GGG 0.609940 6_4:+6481651 None:intergenic
GTTTGATCTCCTTAGAAGTG+AGG 0.610318 6_4:-6478323 Msa0973770:CDS
GAATGCTGGTTCCTCGCACT+AGG 0.615672 6_4:-6477361 Msa0973770:intron
ATATCCCCTCGAAAAGGCCG+AGG 0.617983 6_4:-6483088 Msa0973770:CDS
GCAATGGTGAAGTTGAAGAA+CGG 0.628298 6_4:-6475992 Msa0973770:CDS
ATTCAGAGGTGCGAAGAGTG+AGG 0.629040 6_4:-6479955 Msa0973770:CDS
AGGAATTTATGCCAACCGGA+GGG 0.630897 6_4:-6479910 Msa0973770:CDS
AATACCTTCTTCATGACCGA+AGG 0.632047 6_4:-6482018 Msa0973770:CDS
GTCCAGTGAGTTCCATTCAG+AGG 0.633798 6_4:-6479969 Msa0973770:CDS
AGTAATTCCGATGCATTGGG+TGG 0.635588 6_4:+6473799 None:intergenic
ATTTCCTTGGACGGTTGATG+GGG 0.636961 6_4:-6473830 Msa0973770:CDS
TATTATCCCAGTTCAGCAGG+TGG 0.637263 6_4:-6480540 Msa0973770:CDS
ATGATTCTGCCTGTGTTCTG+CGG 0.638966 6_4:-6477880 Msa0973770:CDS
CCTTCTGAACTAACTCGTCA+GGG 0.640571 6_4:-6477773 Msa0973770:CDS
AAAGTAGTAATAGCGAGTAA+CGG 0.640674 6_4:+6484831 None:intergenic
TGATAGAACTCCTAAACAGA+AGG 0.642129 6_4:-6477607 Msa0973770:CDS
GCGAGGAACCAGCATTCGTG+TGG 0.646609 6_4:+6477367 None:intergenic
CGGTCATGAAGAAGGTATTG+GGG 0.652802 6_4:+6482022 None:intergenic
CAGGTAAAATACCTAGTGCG+AGG 0.654216 6_4:+6477350 None:intergenic
TCCTGAATATGCTCATGCTG+AGG 0.654710 6_4:-6479766 Msa0973770:CDS
GAGGAATTTATGCCAACCGG+AGG 0.662170 6_4:-6479911 Msa0973770:CDS
CAACATCTTCCGCAGAACAC+AGG 0.668722 6_4:+6477871 None:intergenic
TTCAAGCCCGTCCAACATGG+AGG 0.669863 6_4:+6474884 None:intergenic
ATATTGCAGGAGAAGGTACG+GGG 0.670227 6_4:-6475248 Msa0973770:intron
GGAATCGCTGAGGAAAGATG+AGG 0.672953 6_4:+6477833 None:intergenic
TGGTGGACGACCAAGATCTG+AGG 0.682428 6_4:-6477532 Msa0973770:intron
GGAGGAGTCCTTGCTAACAA+GGG 0.684691 6_4:+6474902 None:intergenic
CGGGACTTCCCTAATTACAA+GGG 0.686720 6_4:+6481634 None:intergenic
TTAATAATGAAATATAATGG+TGG 0.689506 6_4:-6477549 Msa0973770:CDS
CATGGCGGTATGTACTATGG+AGG 0.690415 6_4:+6475217 None:intergenic
TTGTTATGAGAAACCCTGAT+GGG 0.691038 6_4:-6479716 Msa0973770:CDS
TTCTTGAAGATCCAATAGAG+AGG 0.693190 6_4:-6483371 Msa0973770:intron
TGTAAATCTTAAGGTCATGG+CGG 0.715564 6_4:+6475202 None:intergenic
GATAATATATCATTATACTG+TGG 0.719552 6_4:+6480556 None:intergenic
TAAAGTAGGTGGAATCGCTG+AGG 0.734773 6_4:+6477823 None:intergenic
GTTGTTATGAGAAACCCTGA+TGG 0.750947 6_4:-6479717 Msa0973770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTACATAATAAGT+AGG - chr6_4:6476352-6476371 Msa0973770:intron 10.0%
!!! ACTGATTTTTTTTTTTTTAT+TGG - chr6_4:6482546-6482565 Msa0973770:intron 10.0%
!! AAAAAAGAGAAAAATTAATT+AGG + chr6_4:6482909-6482928 None:intergenic 10.0%
!!! AATTAATTTTTCTCTTTTTT+AGG - chr6_4:6482909-6482928 Msa0973770:intron 10.0%
!! ATATTTAATAGATAAGAAAA+AGG + chr6_4:6483976-6483995 None:intergenic 10.0%
!!! GCTTTTATATTATTAATATT+TGG - chr6_4:6484054-6484073 Msa0973770:intron 10.0%
!! TAGAATATAACTATATCTAT+AGG + chr6_4:6474214-6474233 None:intergenic 15.0%
!!! CTATTTTCTTAAATTATTAC+CGG - chr6_4:6474390-6474409 Msa0973770:intron 15.0%
!!! GATTCTATATTATATTGATT+TGG - chr6_4:6475960-6475979 Msa0973770:CDS 15.0%
!! AAATATTTAAGCAAAACAAA+TGG + chr6_4:6476768-6476787 None:intergenic 15.0%
!!! AATATTTCCTTTTTTTTTCA+AGG - chr6_4:6476840-6476859 Msa0973770:CDS 15.0%
!!! ATATTTCCTTTTTTTTTCAA+GGG - chr6_4:6476841-6476860 Msa0973770:CDS 15.0%
!! AACAAAAGAAAAACATTTAT+CGG - chr6_4:6478539-6478558 Msa0973770:intron 15.0%
!! AAAGAAAAAGATATATGATT+TGG + chr6_4:6479118-6479137 None:intergenic 15.0%
!!! ATCATATATCTTTTTCTTTT+TGG - chr6_4:6479119-6479138 Msa0973770:intron 15.0%
!! TATTTATGTTATAGAAATAG+AGG - chr6_4:6479235-6479254 Msa0973770:intron 15.0%
!!! ATTATCTTGTTTCAATTAAT+TGG - chr6_4:6480052-6480071 Msa0973770:intron 15.0%
!! TAGAATATTAAATTATCACT+TGG + chr6_4:6480115-6480134 None:intergenic 15.0%
!! TAGATATTTGAAAAATGATA+AGG - chr6_4:6480615-6480634 Msa0973770:intron 15.0%
!!! AAAACGGATTTAATTAAAAA+AGG + chr6_4:6480705-6480724 None:intergenic 15.0%
!! ACAAACTATTAATCATAAAA+CGG + chr6_4:6480721-6480740 None:intergenic 15.0%
!! AGCTTAATAATGAAATATAA+TGG - chr6_4:6481133-6481152 Msa0973770:intron 15.0%
!! TTAATAATGAAATATAATGG+TGG - chr6_4:6481136-6481155 Msa0973770:intron 15.0%
!! CTTTATATAACTAAACAAAT+AGG - chr6_4:6481491-6481510 Msa0973770:intron 15.0%
!!! ATTTGAAAAATAGATTTTTG+TGG - chr6_4:6481979-6481998 Msa0973770:intron 15.0%
!!! GTTATTATTTTTTTTTTTCC+TGG - chr6_4:6482026-6482045 Msa0973770:CDS 15.0%
!! TTGGATGAAAAATTATAAAA+GGG + chr6_4:6482157-6482176 None:intergenic 15.0%
!! AAAAAAAAAATCAGTTATTC+AGG + chr6_4:6482541-6482560 None:intergenic 15.0%
!!! TTAATAATCCAAAATTTTCA+TGG - chr6_4:6483030-6483049 Msa0973770:intron 15.0%
!! CTTTATATTTGTAAAATACT+AGG - chr6_4:6483147-6483166 Msa0973770:intron 15.0%
!! TAAAAAAAGATAACCAAATT+AGG + chr6_4:6483756-6483775 None:intergenic 15.0%
!!! ATTTGGTTATCTTTTTTTAA+AGG - chr6_4:6483757-6483776 Msa0973770:intron 15.0%
!! TTTAAAAATAAAATAAAGCC+AGG - chr6_4:6484518-6484537 Msa0973770:intron 15.0%
!! ATTACAGAGAAAATCAAAAT+CGG - chr6_4:6474054-6474073 Msa0973770:intron 20.0%
!!! TTCCAACAATTTTTTGTTTT+TGG - chr6_4:6474768-6474787 Msa0973770:intron 20.0%
!!! ACAGTAGTTATCAAATTTTA+TGG + chr6_4:6475101-6475120 None:intergenic 20.0%
!! AATTTATGTGATCTAACATT+TGG - chr6_4:6475145-6475164 Msa0973770:intron 20.0%
!!! TGATATTTTGTGTCATATAT+AGG - chr6_4:6475267-6475286 Msa0973770:intron 20.0%
!!! ATATATAGGTCATACATTTT+GGG - chr6_4:6475281-6475300 Msa0973770:intron 20.0%
!!! GTGAGTAAAAAATTTGAAAT+TGG + chr6_4:6475424-6475443 None:intergenic 20.0%
!! GCAATAAAAATATTGGATTT+GGG - chr6_4:6475710-6475729 Msa0973770:intron 20.0%
!! CAATAAAAATATTGGATTTG+GGG - chr6_4:6475711-6475730 Msa0973770:intron 20.0%
!! TAGGATGTGATATTTAATAT+TGG - chr6_4:6475860-6475879 Msa0973770:intron 20.0%
!!! TATATTGATTTGGTTGAAAT+TGG - chr6_4:6475970-6475989 Msa0973770:CDS 20.0%
!! TCCAAAAATTTAATCTAACT+TGG - chr6_4:6476227-6476246 Msa0973770:intron 20.0%
!!! TCCAAGTTAGATTAAATTTT+TGG + chr6_4:6476231-6476250 None:intergenic 20.0%
!!! AGAATTTTCTCTGTTTTATT+TGG - chr6_4:6476473-6476492 Msa0973770:intron 20.0%
!! ATTCAAAAAACACAACAAAA+GGG + chr6_4:6476562-6476581 None:intergenic 20.0%
!! TATTCAAAAAACACAACAAA+AGG + chr6_4:6476563-6476582 None:intergenic 20.0%
!!! TGTTGTGTTTTTTGAATATT+TGG - chr6_4:6476565-6476584 Msa0973770:intron 20.0%
!!! AAATATTTTTATGTGTTACG+TGG - chr6_4:6476780-6476799 Msa0973770:intron 20.0%
!! TGAGAAAAATAGTATATATC+AGG + chr6_4:6476973-6476992 None:intergenic 20.0%
!!! ATTTTTCTCATGTTTGATTT+TGG - chr6_4:6476983-6477002 Msa0973770:intron 20.0%
!!! TTTTTCTCATGTTTGATTTT+GGG - chr6_4:6476984-6477003 Msa0973770:intron 20.0%
!! AATAAAGTAATCAAGTTCTT+CGG + chr6_4:6477078-6477097 None:intergenic 20.0%
!! AAAATTAAAGAGTTTCAACA+TGG + chr6_4:6477191-6477210 None:intergenic 20.0%
!! ATAGTCAATTAGAACATATT+TGG + chr6_4:6477587-6477606 None:intergenic 20.0%
!! ACTTTCATTCATTTAACATA+TGG + chr6_4:6477983-6478002 None:intergenic 20.0%
!! GATAATATATCATTATACTG+TGG + chr6_4:6478132-6478151 None:intergenic 20.0%
!! CTTCTCTTTATTAAATATGA+AGG + chr6_4:6478326-6478345 None:intergenic 20.0%
!! TATTTAATAAAGAGAAGAGT+TGG - chr6_4:6478329-6478348 Msa0973770:CDS 20.0%
!! TATGACTGAAATACAATTAA+TGG - chr6_4:6478648-6478667 Msa0973770:intron 20.0%
!!! TTTTGGTGTTATATTATCAT+AGG - chr6_4:6478683-6478702 Msa0973770:intron 20.0%
!! CATAAATTCCTCATATATAT+AGG + chr6_4:6478766-6478785 None:intergenic 20.0%
!! CTAATAACAGATATATAGTT+TGG + chr6_4:6479150-6479169 None:intergenic 20.0%
!! AGCAAATTTATAATCTCATT+TGG - chr6_4:6479596-6479615 Msa0973770:intron 20.0%
!!! TTGTTTTTCTATTGTTTTGT+TGG - chr6_4:6479925-6479944 Msa0973770:CDS 20.0%
!! TTCACTTTATCCAAAAAATT+TGG - chr6_4:6480139-6480158 Msa0973770:intron 20.0%
!!! CTCTCTTTAATTAGAATTTT+TGG - chr6_4:6480444-6480463 Msa0973770:intron 20.0%
!! TTTAACCAATTCAATGATAA+AGG + chr6_4:6481017-6481036 None:intergenic 20.0%
!! TAACATTAGATCATACATAT+GGG + chr6_4:6481244-6481263 None:intergenic 20.0%
!! ATAACATTAGATCATACATA+TGG + chr6_4:6481245-6481264 None:intergenic 20.0%
!!! TCTGAAATTTGATTAATCAT+GGG + chr6_4:6481418-6481437 None:intergenic 20.0%
!!! ATCTGAAATTTGATTAATCA+TGG + chr6_4:6481419-6481438 None:intergenic 20.0%
!! TTGTTTAGTTATATAAAGCA+AGG + chr6_4:6481489-6481508 None:intergenic 20.0%
!!! AATATCATTTTTCTTTCATG+GGG + chr6_4:6481618-6481637 None:intergenic 20.0%
!!! CAATATCATTTTTCTTTCAT+GGG + chr6_4:6481619-6481638 None:intergenic 20.0%
!!! ACAATATCATTTTTCTTTCA+TGG + chr6_4:6481620-6481639 None:intergenic 20.0%
!!! TTTCAAATTTTAGTTACTAG+CGG + chr6_4:6481967-6481986 None:intergenic 20.0%
!! GTTGGATGAAAAATTATAAA+AGG + chr6_4:6482158-6482177 None:intergenic 20.0%
!! TAAAAATAAATCCAACCAAA+TGG + chr6_4:6482203-6482222 None:intergenic 20.0%
!! AAAAATTAATTAGGATGACT+GGG + chr6_4:6482900-6482919 None:intergenic 20.0%
!! TTTCGAAATAAAATATATCC+AGG - chr6_4:6482952-6482971 Msa0973770:intron 20.0%
!! GATTATTAAAGTAACCATAA+AGG + chr6_4:6483019-6483038 None:intergenic 20.0%
!! TATTTGTAAAATACTAGGTA+AGG - chr6_4:6483152-6483171 Msa0973770:intron 20.0%
!! TTGGATAATATACAACAATA+TGG + chr6_4:6483213-6483232 None:intergenic 20.0%
!! TAACTGTAACATATATTACA+TGG + chr6_4:6483333-6483352 None:intergenic 20.0%
!!! AATTAATCCTTTTTTTTGTG+TGG - chr6_4:6483721-6483740 Msa0973770:intron 20.0%
!!! TGATCAATTTCTTTGATTTT+GGG + chr6_4:6484020-6484039 None:intergenic 20.0%
!!! TTGATCAATTTCTTTGATTT+TGG + chr6_4:6484021-6484040 None:intergenic 20.0%
!!! AACCAATCATATAAAGTTTT+GGG + chr6_4:6484241-6484260 None:intergenic 20.0%
!! GAAAAAGAAAATGAAACAAT+AGG - chr6_4:6484369-6484388 Msa0973770:intron 20.0%
!! TGGACAATAAGTAAAATAAA+AGG + chr6_4:6484749-6484768 None:intergenic 20.0%
!!! ATTTTACTTATTGTCCATAA+TGG - chr6_4:6484752-6484771 Msa0973770:five_prime_UTR 20.0%
!!! TTTTACTTATTGTCCATAAT+GGG - chr6_4:6484753-6484772 Msa0973770:five_prime_UTR 20.0%
! TTTAAGGAACTGAAATGAAT+TGG - chr6_4:6474261-6474280 Msa0973770:intron 25.0%
! TCAAATGTAATCACATGTAT+CGG + chr6_4:6474486-6474505 None:intergenic 25.0%
! GTCCAAAAACAAAAAATTGT+TGG + chr6_4:6474773-6474792 None:intergenic 25.0%
! TGTAAAAGAAATAGTAGAGT+TGG - chr6_4:6475203-6475222 Msa0973770:CDS 25.0%
!! CATATATAGGTCATACATTT+TGG - chr6_4:6475280-6475299 Msa0973770:intron 25.0%
!! TATATAGGTCATACATTTTG+GGG - chr6_4:6475282-6475301 Msa0973770:intron 25.0%
! CAATAGTTCATATCAATTGT+TGG - chr6_4:6475339-6475358 Msa0973770:intron 25.0%
!!! TTTTTAGTAATCAGCTCTAT+AGG - chr6_4:6475682-6475701 Msa0973770:intron 25.0%
! GGCAATAAAAATATTGGATT+TGG - chr6_4:6475709-6475728 Msa0973770:intron 25.0%
!!! ACAACACACAATTTGTTTTA+TGG - chr6_4:6475810-6475829 Msa0973770:intron 25.0%
!! ATATTTAATATTGGTGCTTC+TGG - chr6_4:6475869-6475888 Msa0973770:intron 25.0%
!! TTCTGGAGAAAAATTAAAAC+TGG - chr6_4:6475886-6475905 Msa0973770:intron 25.0%
! GAAGTAACATGATTTATGTT+TGG - chr6_4:6475997-6476016 Msa0973770:CDS 25.0%
! AAAAATGTAGCTTCTAAGTT+AGG + chr6_4:6476079-6476098 None:intergenic 25.0%
!! ACAAATTTTCCAAGACTTAT+CGG + chr6_4:6476162-6476181 None:intergenic 25.0%
!! AGAAGAGAAGATAATTTGTA+AGG - chr6_4:6476295-6476314 Msa0973770:intron 25.0%
!! GAAGAGAAGATAATTTGTAA+GGG - chr6_4:6476296-6476315 Msa0973770:intron 25.0%
!!! TCATTTAGATTTGTTAGCAT+CGG - chr6_4:6476403-6476422 Msa0973770:intron 25.0%
!!! TTTCTCTGTTTTATTTGGTT+AGG - chr6_4:6476478-6476497 Msa0973770:intron 25.0%
!! TTTTGAATATTTGGATGCAA+AGG - chr6_4:6476574-6476593 Msa0973770:intron 25.0%
! AGTATATATCAGGACTTAAT+TGG + chr6_4:6476963-6476982 None:intergenic 25.0%
! AGAACTTGATTACTTTATTG+AGG - chr6_4:6477079-6477098 Msa0973770:intron 25.0%
!!! AGTCTCTTTGTTTCTTTTTA+TGG - chr6_4:6477307-6477326 Msa0973770:intron 25.0%
! TTAACATGAGATATATAGAG+TGG - chr6_4:6477340-6477359 Msa0973770:intron 25.0%
! ATTGCATATGTAAGTTTACA+TGG - chr6_4:6477605-6477624 Msa0973770:CDS 25.0%
! TAACTAAATGCCAATGTAAT+AGG + chr6_4:6477897-6477916 None:intergenic 25.0%
! TATGAAGGAATTATTTAGGA+AGG - chr6_4:6478171-6478190 Msa0973770:intron 25.0%
! TTGTATTGCAATATAATCAC+TGG + chr6_4:6478497-6478516 None:intergenic 25.0%
! CAATCTATGAAAAACAGATA+TGG - chr6_4:6478514-6478533 Msa0973770:intron 25.0%
!!! TTTCAACACACTTTTTGATA+TGG - chr6_4:6478598-6478617 Msa0973770:intron 25.0%
!!! TGAAATACAATTAATGGACT+TGG - chr6_4:6478654-6478673 Msa0973770:intron 25.0%
!!! TATTATCATAGGTTGGTAAT+AGG - chr6_4:6478694-6478713 Msa0973770:intron 25.0%
! TTAGAATTAGAATCAAGAGT+AGG - chr6_4:6479166-6479185 Msa0973770:intron 25.0%
! CACAAATCACAAATTTAACA+TGG - chr6_4:6479281-6479300 Msa0973770:intron 25.0%
!!! ATTTTGATTATGTGACCAAA+GGG - chr6_4:6479315-6479334 Msa0973770:intron 25.0%
!! CTTAGTATGTTTTATCTTGA+GGG - chr6_4:6479462-6479481 Msa0973770:intron 25.0%
!! TTAGTATGTTTTATCTTGAG+GGG - chr6_4:6479463-6479482 Msa0973770:intron 25.0%
!! AACTTCATCTGTTGATTATT+AGG - chr6_4:6479505-6479524 Msa0973770:intron 25.0%
! AATTTATAATCTCATTTGGC+AGG - chr6_4:6479600-6479619 Msa0973770:intron 25.0%
!! ATTTTCAGAAACATATTTCC+TGG - chr6_4:6479752-6479771 Msa0973770:CDS 25.0%
!! TATGGTTGGTTATCTTAAAA+AGG + chr6_4:6480005-6480024 None:intergenic 25.0%
! CATTATAGAACTTCTCAATA+TGG + chr6_4:6480023-6480042 None:intergenic 25.0%
! TTTAAGTCCATAAAACATTG+TGG + chr6_4:6480224-6480243 None:intergenic 25.0%
! TTCTATCCTTAACATATGTT+GGG - chr6_4:6480582-6480601 Msa0973770:intron 25.0%
!!! TTTTTTCCCAACATATGTTA+AGG + chr6_4:6480591-6480610 None:intergenic 25.0%
!! TTGTTTGTAAACGTTTTCAT+TGG - chr6_4:6480737-6480756 Msa0973770:intron 25.0%
! ATAATACCTTTAATAGCAAC+AGG + chr6_4:6480784-6480803 None:intergenic 25.0%
! ATTATCTCATTTACTTTCCA+TGG + chr6_4:6480888-6480907 None:intergenic 25.0%
!!! AGTGGTATTAATGGATATTT+TGG - chr6_4:6480936-6480955 Msa0973770:intron 25.0%
! TGTTTCCTTTATCATTGAAT+TGG - chr6_4:6481009-6481028 Msa0973770:intron 25.0%
! AACATTAGATCATACATATG+GGG + chr6_4:6481243-6481262 None:intergenic 25.0%
!!! ATATCATTTTTCTTTCATGG+GGG + chr6_4:6481617-6481636 None:intergenic 25.0%
! ATTGTAGACAAGAAATACAA+AGG - chr6_4:6481635-6481654 Msa0973770:CDS 25.0%
! TTATTTAGACAAGATCTAGA+AGG - chr6_4:6481812-6481831 Msa0973770:intron 25.0%
! TGTTACATCATGAATATGTT+TGG - chr6_4:6481931-6481950 Msa0973770:intron 25.0%
!!! TTCAAATTTTAGTTACTAGC+GGG + chr6_4:6481966-6481985 None:intergenic 25.0%
! AAAAGTTAATGCAAAGAAGT+TGG + chr6_4:6482176-6482195 None:intergenic 25.0%
! ATGTAGATTATAAAAGTCTC+CGG + chr6_4:6482278-6482297 None:intergenic 25.0%
! GCTCTTATGATTCTTAAATA+TGG - chr6_4:6482725-6482744 Msa0973770:intron 25.0%
! CTTATGATTCTTAAATATGG+TGG - chr6_4:6482728-6482747 Msa0973770:intron 25.0%
! GAAAAATTAATTAGGATGAC+TGG + chr6_4:6482901-6482920 None:intergenic 25.0%
!! AGAGATATTTGAATTTTACC+TGG + chr6_4:6482973-6482992 None:intergenic 25.0%
! CTTCTTCAAGTAAATTTAGT+TGG - chr6_4:6482991-6483010 Msa0973770:intron 25.0%
!! AAATTTAGTTGGTTCCTTTA+TGG - chr6_4:6483002-6483021 Msa0973770:intron 25.0%
!! AAAGACAACCATGAAAATTT+TGG + chr6_4:6483041-6483060 None:intergenic 25.0%
! TTATAGAGCAGATTAAGAAA+GGG + chr6_4:6483100-6483119 None:intergenic 25.0%
! ATTATAGAGCAGATTAAGAA+AGG + chr6_4:6483101-6483120 None:intergenic 25.0%
! ACGAAAAAAATTGACAGTAT+CGG - chr6_4:6483292-6483311 Msa0973770:intron 25.0%
!! GGATTAATTATTTTCTTCAG+AGG + chr6_4:6483710-6483729 None:intergenic 25.0%
! AACATATCCACACAAAAAAA+AGG + chr6_4:6483731-6483750 None:intergenic 25.0%
!!! TTTTGGTTTCATTTGTTTCT+CGG - chr6_4:6483922-6483941 Msa0973770:intron 25.0%
!! GCTAGTATTATCTACATTTT+TGG + chr6_4:6484081-6484100 None:intergenic 25.0%
! AAAATGTAGATAATACTAGC+TGG - chr6_4:6484081-6484100 Msa0973770:intron 25.0%
! TACCCAAAACTTTATATGAT+TGG - chr6_4:6484236-6484255 Msa0973770:intron 25.0%
!! CAACCAATCATATAAAGTTT+TGG + chr6_4:6484242-6484261 None:intergenic 25.0%
! AAATCAGTCACATATTTGTT+TGG - chr6_4:6484307-6484326 Msa0973770:intron 25.0%
! TATTTGTTTGGATACCATAA+AGG - chr6_4:6484319-6484338 Msa0973770:intron 25.0%
! ATGAAACAATAGGAATATAC+AGG - chr6_4:6484379-6484398 Msa0973770:intron 25.0%
! TGAAACAATAGGAATATACA+GGG - chr6_4:6484380-6484399 Msa0973770:intron 25.0%
! AGACTTGTAGTATAGTATAA+TGG + chr6_4:6484464-6484483 None:intergenic 25.0%
! AAGTGTAAACTACTAACAAT+TGG - chr6_4:6484657-6484676 Msa0973770:exon 25.0%
GGAAATGATACGGTTTATAA+CGG + chr6_4:6473836-6473855 None:intergenic 30.0%
AAAGTAGTAATAGCGAGTAA+CGG + chr6_4:6473857-6473876 None:intergenic 30.0%
CTTTCTTTCTTTCAGTCAAA+TGG + chr6_4:6473892-6473911 None:intergenic 30.0%
!! TTCAACAAACTCGTTGTTTT+TGG + chr6_4:6473923-6473942 None:intergenic 30.0%
ACGTATCATTGTTGAGTTTA+AGG - chr6_4:6474245-6474264 Msa0973770:intron 30.0%
AACTGAAATGAATTGGATCT+CGG - chr6_4:6474268-6474287 Msa0973770:intron 30.0%
CAACATTGATACATAAACAC+CGG + chr6_4:6474412-6474431 None:intergenic 30.0%
! GTTTAAAGCAAGTTAGAACT+CGG - chr6_4:6474433-6474452 Msa0973770:intron 30.0%
TCAATTGTTCATGAATCTAC+TGG - chr6_4:6474949-6474968 Msa0973770:intron 30.0%
GCAATCAAACAATCACATAT+GGG + chr6_4:6475562-6475581 None:intergenic 30.0%
AGCAATCAAACAATCACATA+TGG + chr6_4:6475563-6475582 None:intergenic 30.0%
TTGATTGCTTTCTATTCTTC+TGG - chr6_4:6475574-6475593 Msa0973770:intron 30.0%
AGATGCAAATCAACAAAAGT+TGG + chr6_4:6475655-6475674 None:intergenic 30.0%
GGACAAGGCAATAAAAATAT+TGG - chr6_4:6475703-6475722 Msa0973770:intron 30.0%
GTGTGTTGTAAAGACTATAA+AGG + chr6_4:6475799-6475818 None:intergenic 30.0%
!!! ACACAATTTGTTTTATGGAG+TGG - chr6_4:6475815-6475834 Msa0973770:intron 30.0%
!! TAACTCTGAGATAGGATATT+AGG - chr6_4:6475841-6475860 Msa0973770:intron 30.0%
GGAGAAAAATTAAAACTGGT+TGG - chr6_4:6475890-6475909 Msa0973770:intron 30.0%
!!! AGCTACATTTTTTTCACACT+TGG - chr6_4:6476087-6476106 Msa0973770:intron 30.0%
! CAAATTTTCCAAGACTTATC+GGG + chr6_4:6476161-6476180 None:intergenic 30.0%
! AAGCATAGTTTAGTTTCTGA+TGG + chr6_4:6476190-6476209 None:intergenic 30.0%
ATCAGAAACTAAACTATGCT+TGG - chr6_4:6476189-6476208 Msa0973770:intron 30.0%
TCAGAAACTAAACTATGCTT+GGG - chr6_4:6476190-6476209 Msa0973770:intron 30.0%
! AAGAGTTTGAAATCTTCACA+GGG - chr6_4:6476250-6476269 Msa0973770:intron 30.0%
ATAATAAGTAGGTCAGTTAG+AGG - chr6_4:6476363-6476382 Msa0973770:intron 30.0%
!! CATTTAGATTTGTTAGCATC+GGG - chr6_4:6476404-6476423 Msa0973770:intron 30.0%
GATTATCTTGAGAAATTGGA+TGG + chr6_4:6476521-6476540 None:intergenic 30.0%
GAGAGATTATCTTGAGAAAT+TGG + chr6_4:6476525-6476544 None:intergenic 30.0%
ACCTTTCCTCATAAATGAAT+TGG - chr6_4:6476638-6476657 Msa0973770:intron 30.0%
TCCAATTCATTTATGAGGAA+AGG + chr6_4:6476642-6476661 None:intergenic 30.0%
TTACCTCATATACTTTCCTT+CGG + chr6_4:6476686-6476705 None:intergenic 30.0%
TCAAATGAACAATGACATGA+AGG + chr6_4:6476896-6476915 None:intergenic 30.0%
! TATCAGGACTTAATTGGTTT+GGG + chr6_4:6476957-6476976 None:intergenic 30.0%
ATATCAGGACTTAATTGGTT+TGG + chr6_4:6476958-6476977 None:intergenic 30.0%
AAGATATGCCCTTGTAATTA+GGG - chr6_4:6477043-6477062 Msa0973770:intron 30.0%
! GAAGATTTTGTTGAAGTTGA+TGG - chr6_4:6477104-6477123 Msa0973770:intron 30.0%
AAAGTAGTTCTCATAGAAAC+AGG + chr6_4:6477268-6477287 None:intergenic 30.0%
ATATTACTACAAAGCCAACA+TGG - chr6_4:6477394-6477413 Msa0973770:CDS 30.0%
TATTACTACAAAGCCAACAT+GGG - chr6_4:6477395-6477414 Msa0973770:CDS 30.0%
GTTTACATGGCTTGAAATAA+AGG - chr6_4:6477618-6477637 Msa0973770:intron 30.0%
TTATAAACATCACCTAGTGA+CGG + chr6_4:6477765-6477784 None:intergenic 30.0%
CTAATATCACAGATGTACTT+GGG + chr6_4:6477790-6477809 None:intergenic 30.0%
TCTAATATCACAGATGTACT+TGG + chr6_4:6477791-6477810 None:intergenic 30.0%
! TCCTTTTCAGATATGTGTTT+TGG - chr6_4:6477863-6477882 Msa0973770:CDS 30.0%
TTCTCAGATATGATAGTAAC+TGG - chr6_4:6478067-6478086 Msa0973770:intron 30.0%
GAGGTATGAAGGAATTATTT+AGG - chr6_4:6478167-6478186 Msa0973770:intron 30.0%
ATGAATGCAATATGTTCTAG+AGG - chr6_4:6478236-6478255 Msa0973770:intron 30.0%
TTCAACAAATCTGTAGGAAA+AGG + chr6_4:6478266-6478285 None:intergenic 30.0%
!! TTCCTACAGATTTGTTGAAA+AGG - chr6_4:6478267-6478286 Msa0973770:intron 30.0%
! AACCTTTTCAACAAATCTGT+AGG + chr6_4:6478272-6478291 None:intergenic 30.0%
!! TACAGATTTGTTGAAAAGGT+TGG - chr6_4:6478271-6478290 Msa0973770:CDS 30.0%
!! ACAGATTTGTTGAAAAGGTT+GGG - chr6_4:6478272-6478291 Msa0973770:CDS 30.0%
TTTAAGTGGATGTGTTAACT+CGG - chr6_4:6478449-6478468 Msa0973770:intron 30.0%
! GGTGTTATATTATCATAGGT+TGG - chr6_4:6478687-6478706 Msa0973770:intron 30.0%
TATAGAAATAGAGGTGAGTT+TGG - chr6_4:6479244-6479263 Msa0973770:intron 30.0%
!!! GATTTTGATTATGTGACCAA+AGG - chr6_4:6479314-6479333 Msa0973770:intron 30.0%
AGGATGTATTGTAGAGAAAA+TGG + chr6_4:6479421-6479440 None:intergenic 30.0%
!! TTTAAGCTTGCTAAAATGCA+AGG + chr6_4:6479441-6479460 None:intergenic 30.0%
! GCTTAGTATGTTTTATCTTG+AGG - chr6_4:6479461-6479480 Msa0973770:intron 30.0%
TAGGATTAGAATCATAGCTT+AGG - chr6_4:6479524-6479543 Msa0973770:intron 30.0%
ATAGAACTTCTCAATATGGT+TGG + chr6_4:6480019-6480038 None:intergenic 30.0%
!!! GAGTCATAGTCCAAATTTTT+TGG + chr6_4:6480152-6480171 None:intergenic 30.0%
TATTATGGTAGGTAAGATGT+AGG - chr6_4:6480182-6480201 Msa0973770:intron 30.0%
! GAGATTTCCACAATGTTTTA+TGG - chr6_4:6480214-6480233 Msa0973770:intron 30.0%
TTTGACAATAAGCCTTTGAA+TGG - chr6_4:6480265-6480284 Msa0973770:intron 30.0%
TCATATGTTTGTGATGTGAA+TGG - chr6_4:6480390-6480409 Msa0973770:intron 30.0%
!! TTTTTGGCAGTTTTTGACAT+TGG - chr6_4:6480460-6480479 Msa0973770:intron 30.0%
TAATCAAAATATCTCTCCCA+TGG - chr6_4:6480527-6480546 Msa0973770:CDS 30.0%
AATCAAAATATCTCTCCCAT+GGG - chr6_4:6480528-6480547 Msa0973770:CDS 30.0%
!!! ATTTGAGTTGGCGATTTTAT+TGG - chr6_4:6480556-6480575 Msa0973770:CDS 30.0%
!!! TTTGAGTTGGCGATTTTATT+GGG - chr6_4:6480557-6480576 Msa0973770:CDS 30.0%
CTTCTATCCTTAACATATGT+TGG - chr6_4:6480581-6480600 Msa0973770:intron 30.0%
!! TTTTCTCCTGTTGCTATTAA+AGG - chr6_4:6480775-6480794 Msa0973770:intron 30.0%
TTTACTTTCCATGGTAAAGT+AGG + chr6_4:6480879-6480898 None:intergenic 30.0%
! TTTAACTTCACCTTCTGTTT+AGG + chr6_4:6481091-6481110 None:intergenic 30.0%
TAAACAGAAGGTGAAGTTAA+AGG - chr6_4:6481090-6481109 Msa0973770:intron 30.0%
! ACTAGGTATTTTACCTGAAT+AGG - chr6_4:6481341-6481360 Msa0973770:intron 30.0%
ATCAATAATGAAGCCTATTC+AGG + chr6_4:6481357-6481376 None:intergenic 30.0%
! CATGTTCTTGTTTAAAGCAA+GGG + chr6_4:6481520-6481539 None:intergenic 30.0%
!!! ATTACCTTTTTTGCCATGTT+TGG - chr6_4:6481685-6481704 Msa0973770:intron 30.0%
CATACATTTGAATCCAAACA+TGG + chr6_4:6481701-6481720 None:intergenic 30.0%
AAAATTATAAAAGGGCAACC+CGG + chr6_4:6482149-6482168 None:intergenic 30.0%
! CATTAACTTTTACCTCCATT+TGG - chr6_4:6482185-6482204 Msa0973770:intron 30.0%
AAATAAATCCAACCAAATGG+AGG + chr6_4:6482200-6482219 None:intergenic 30.0%
TGTAGATTATAAAAGTCTCC+GGG + chr6_4:6482277-6482296 None:intergenic 30.0%
ATACTTTCCAAATTCGAAGA+TGG + chr6_4:6482301-6482320 None:intergenic 30.0%
! TTCTCTTTTACGCATAATAC+AGG - chr6_4:6482473-6482492 Msa0973770:intron 30.0%
!! TCAGTTATTCAGGCTTTAAA+AGG + chr6_4:6482531-6482550 None:intergenic 30.0%
TTCAATTAAAGCCACTAAAG+TGG - chr6_4:6482654-6482673 Msa0973770:intron 30.0%
TCAATTAAAGCCACTAAAGT+GGG - chr6_4:6482655-6482674 Msa0973770:intron 30.0%
AATCAAACTCAAGTCTCAAA+CGG + chr6_4:6482823-6482842 None:intergenic 30.0%
!! GTTTGATTGTACTGCTTTTA+TGG - chr6_4:6482835-6482854 Msa0973770:intron 30.0%
AAAATATCTTCCCAGTTCTT+CGG + chr6_4:6482935-6482954 None:intergenic 30.0%
TGATTTAATATTGCAGGAGA+AGG - chr6_4:6483430-6483449 Msa0973770:intron 30.0%
AACTGTAAATCTTAAGGTCA+TGG + chr6_4:6483489-6483508 None:intergenic 30.0%
CATCAGAACTGTAAATCTTA+AGG + chr6_4:6483495-6483514 None:intergenic 30.0%
! TAAGATTTACAGTTCTGATG+AGG - chr6_4:6483495-6483514 Msa0973770:intron 30.0%
! AAGATTTACAGTTCTGATGA+GGG - chr6_4:6483496-6483515 Msa0973770:intron 30.0%
!! CTTAAAGCCTTCTTTTGATT+AGG + chr6_4:6483561-6483580 None:intergenic 30.0%
!! AATCAAAAGAAGGCTTTAAG+TGG - chr6_4:6483561-6483580 Msa0973770:intron 30.0%
! GTGGATATGTTTTCCTAATT+TGG - chr6_4:6483740-6483759 Msa0973770:intron 30.0%
TGAAAATGCACATACTGAAA+TGG - chr6_4:6483820-6483839 Msa0973770:intron 30.0%
TGAAATGCCTATAATCTAGA+AGG + chr6_4:6483885-6483904 None:intergenic 30.0%
CTAGATTATAGGCATTTCAA+CGG - chr6_4:6483886-6483905 Msa0973770:intron 30.0%
TCAAATGGCATACTGTAAAT+TGG - chr6_4:6484115-6484134 Msa0973770:intron 30.0%
GCAAAATCTGGTATTAAGTT+AGG + chr6_4:6484211-6484230 None:intergenic 30.0%
TTGGGTAAAATTGCAAAATC+TGG + chr6_4:6484223-6484242 None:intergenic 30.0%
! AGTCTACAATTCTCTAAAGA+TGG - chr6_4:6484479-6484498 Msa0973770:intron 30.0%
AAATAAAATAAAGCCAGGCT+TGG - chr6_4:6484523-6484542 Msa0973770:intron 30.0%
AATAAAATAAAGCCAGGCTT+GGG - chr6_4:6484524-6484543 Msa0973770:intron 30.0%
!!! TATTGTCCATAATGGGTTTT+TGG - chr6_4:6484760-6484779 Msa0973770:five_prime_UTR 30.0%
!!! ATTGTCCATAATGGGTTTTT+GGG - chr6_4:6484761-6484780 Msa0973770:five_prime_UTR 30.0%
AAAAACCCAAAAACCCATTA+TGG + chr6_4:6484769-6484788 None:intergenic 30.0%
CTGTAAGAAGAAGAAGATCA+TGG - chr6_4:6474026-6474045 Msa0973770:intron 35.0%
ATGGAAAAGAAGGTGAAATG+TGG - chr6_4:6474087-6474106 Msa0973770:intron 35.0%
! TTTCTCTGCTTCTTCTTTTC+TGG - chr6_4:6474159-6474178 Msa0973770:intron 35.0%
!!! TTTCTGGTTTTCGCATTTTG+CGG - chr6_4:6474175-6474194 Msa0973770:intron 35.0%
!!! GATTATAGCGTGTTTTTTGC+AGG - chr6_4:6474695-6474714 Msa0973770:intron 35.0%
!! TTTTGGACTGTGTTTTTTGC+AGG - chr6_4:6474785-6474804 Msa0973770:intron 35.0%
CTATCAAATATCTGTCCCAT+AGG + chr6_4:6474822-6474841 None:intergenic 35.0%
CTATGGGACAGATATTTGAT+AGG - chr6_4:6474820-6474839 Msa0973770:intron 35.0%
TTTGATAGGTTACAAGCGTT+TGG - chr6_4:6474834-6474853 Msa0973770:intron 35.0%
AACAGTGACAAAACAGAACT+TGG + chr6_4:6474904-6474923 None:intergenic 35.0%
! AAGTTCTGTTTTGTCACTGT+TGG - chr6_4:6474903-6474922 Msa0973770:CDS 35.0%
! AGTTCTGTTTTGTCACTGTT+GGG - chr6_4:6474904-6474923 Msa0973770:CDS 35.0%
GTTCATGAATCTACTGGAAA+TGG - chr6_4:6474955-6474974 Msa0973770:intron 35.0%
TTCTTGAAGATCCAATAGAG+AGG - chr6_4:6475314-6475333 Msa0973770:intron 35.0%
GAACTATTGTACCTCTCTAT+TGG + chr6_4:6475328-6475347 None:intergenic 35.0%
!! AAGAACTGTGTTATTTCAGC+TGG - chr6_4:6475536-6475555 Msa0973770:intron 35.0%
AGTTAGACTTTGTGTCTGTT+TGG - chr6_4:6475919-6475938 Msa0973770:intron 35.0%
! GAAGAGTTTGAAATCTTCAC+AGG - chr6_4:6476249-6476268 Msa0973770:intron 35.0%
TTAGAGGATGCAAAGGTAAA+TGG - chr6_4:6476379-6476398 Msa0973770:intron 35.0%
TAGAGGATGCAAAGGTAAAT+GGG - chr6_4:6476380-6476399 Msa0973770:intron 35.0%
! TCATGTAAGGGTATAACACT+TGG - chr6_4:6476436-6476455 Msa0973770:intron 35.0%
GCTAGACCCTTGAAAAAAAA+AGG + chr6_4:6476850-6476869 None:intergenic 35.0%
!!! TTTTTTTCAAGGGTCTAGCT+TGG - chr6_4:6476851-6476870 Msa0973770:CDS 35.0%
!!! TTTTTTCAAGGGTCTAGCTT+GGG - chr6_4:6476852-6476871 Msa0973770:CDS 35.0%
TTCAAGCAACTTGAACTGTT+TGG - chr6_4:6477008-6477027 Msa0973770:intron 35.0%
! CTAATTACAAGGGCATATCT+TGG + chr6_4:6477044-6477063 None:intergenic 35.0%
CAAGATATGCCCTTGTAATT+AGG - chr6_4:6477042-6477061 Msa0973770:intron 35.0%
AAGTAATCAAGTTCTTCGGA+CGG + chr6_4:6477074-6477093 None:intergenic 35.0%
TCAATAGGCTTCTCTACAAA+TGG + chr6_4:6477146-6477165 None:intergenic 35.0%
TTTGTAGAGAAGCCTATTGA+TGG - chr6_4:6477146-6477165 Msa0973770:intron 35.0%
GAAACAAGCTTACCATCAAT+AGG + chr6_4:6477161-6477180 None:intergenic 35.0%
TGATGTTCCAATTTAAGCAC+AGG - chr6_4:6477426-6477445 Msa0973770:intron 35.0%
CTAATTGCCTGTGCTTAAAT+TGG + chr6_4:6477436-6477455 None:intergenic 35.0%
TGTATGCAAGAGCTAGAAAA+AGG - chr6_4:6477529-6477548 Msa0973770:intron 35.0%
GCCAAAACACATATCTGAAA+AGG + chr6_4:6477867-6477886 None:intergenic 35.0%
GGCATAACTTCCTATTACAT+TGG - chr6_4:6477884-6477903 Msa0973770:CDS 35.0%
ATATATTATCCCAGTTCAGC+AGG - chr6_4:6478142-6478161 Msa0973770:intron 35.0%
GAAACTCACTCTCCATAATT+AGG - chr6_4:6478207-6478226 Msa0973770:intron 35.0%
ATTCATGACCCACCTAATTA+TGG + chr6_4:6478222-6478241 None:intergenic 35.0%
TGAAGGCTCCTATATATATG+AGG - chr6_4:6478755-6478774 Msa0973770:intron 35.0%
GAAGTTTGATGAATGACTGT+AGG - chr6_4:6478883-6478902 Msa0973770:intron 35.0%
ATAACAACACCATCAACAAC+AGG + chr6_4:6478956-6478975 None:intergenic 35.0%
TTGTTATGAGAAACCCTGAT+GGG - chr6_4:6478969-6478988 Msa0973770:intron 35.0%
! GTGGCATTTGAAACATTTGA+TGG - chr6_4:6479002-6479021 Msa0973770:intron 35.0%
!! TCTGGCTTTGAAATCAACAA+TGG + chr6_4:6479037-6479056 None:intergenic 35.0%
AGAAAAAATTCTGATACCGC+TGG + chr6_4:6479378-6479397 None:intergenic 35.0%
ATAATCTCATTTGGCAGGTT+AGG - chr6_4:6479605-6479624 Msa0973770:intron 35.0%
! TCATTTGGAGTCAGTAATAC+AGG + chr6_4:6479634-6479653 None:intergenic 35.0%
GACTCCAAATGAGAAAGAAA+TGG - chr6_4:6479642-6479661 Msa0973770:intron 35.0%
CTAGCCATTTCTTTCTCATT+TGG + chr6_4:6479649-6479668 None:intergenic 35.0%
TGAGAAAGAAATGGCTAGAA+AGG - chr6_4:6479651-6479670 Msa0973770:intron 35.0%
TAACTGAAGAAAAATGAGCC+AGG + chr6_4:6479773-6479792 None:intergenic 35.0%
ATGATCAAATGTCAGATGGA+AGG + chr6_4:6479958-6479977 None:intergenic 35.0%
GCTAATGATCAAATGTCAGA+TGG + chr6_4:6479962-6479981 None:intergenic 35.0%
GACTCTTGAGCGAAATATTA+TGG - chr6_4:6480167-6480186 Msa0973770:intron 35.0%
CTTGAGCGAAATATTATGGT+AGG - chr6_4:6480171-6480190 Msa0973770:intron 35.0%
! TAATTTTTCTTTCTGCCTGC+AGG - chr6_4:6480332-6480351 Msa0973770:intron 35.0%
TTTGATCTCCTTAGAAGTGA+GGG - chr6_4:6480363-6480382 Msa0973770:intron 35.0%
ATGTTTGTGATGTGAATGGT+TGG - chr6_4:6480394-6480413 Msa0973770:intron 35.0%
ATCAAAATATCTCTCCCATG+GGG - chr6_4:6480529-6480548 Msa0973770:CDS 35.0%
CAACTCAAATAATTCCCCAT+GGG + chr6_4:6480546-6480565 None:intergenic 35.0%
AGGCTAATGTGAATGATAAG+TGG - chr6_4:6480635-6480654 Msa0973770:intron 35.0%
!! TGGATATTTTGGACAATCTG+AGG - chr6_4:6480947-6480966 Msa0973770:intron 35.0%
TTCTATCACCACTGCAAAAA+GGG + chr6_4:6481066-6481085 None:intergenic 35.0%
TGATAGAACTCCTAAACAGA+AGG - chr6_4:6481078-6481097 Msa0973770:intron 35.0%
TTCTCGAAACATTTACCTTG+AGG - chr6_4:6481459-6481478 Msa0973770:intron 35.0%
! CCATGTTCTTGTTTAAAGCA+AGG + chr6_4:6481521-6481540 None:intergenic 35.0%
! CCTTGCTTTAAACAAGAACA+TGG - chr6_4:6481518-6481537 Msa0973770:intron 35.0%
! GTAATTCTGATGATGTGACA+AGG - chr6_4:6481565-6481584 Msa0973770:CDS 35.0%
! ATTTTTCTTTCATGGGGGAA+AGG + chr6_4:6481612-6481631 None:intergenic 35.0%
GAATCCAAACATGGCAAAAA+AGG + chr6_4:6481692-6481711 None:intergenic 35.0%
CGACATAATGAATGTTAAGC+TGG - chr6_4:6481762-6481781 Msa0973770:intron 35.0%
!!! TGTTAAGCTGGAGTTTTGAA+TGG - chr6_4:6481774-6481793 Msa0973770:intron 35.0%
TCAAGTTAAAGCTGTTCTTG+AGG - chr6_4:6481877-6481896 Msa0973770:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr6_4:6482058-6482077 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr6_4:6482057-6482076 Msa0973770:intron 35.0%
! AACTTTTACCTCCATTTGGT+TGG - chr6_4:6482189-6482208 Msa0973770:intron 35.0%
TTGTCATATACATCTCTACC+CGG - chr6_4:6482256-6482275 Msa0973770:intron 35.0%
TCTACATCCATCTTCGAATT+TGG - chr6_4:6482291-6482310 Msa0973770:intron 35.0%
! TTTTCATGATTGACAACCCA+TGG + chr6_4:6482437-6482456 None:intergenic 35.0%
! TGTCTTTTCTGCTCATTACT+AGG - chr6_4:6482601-6482620 Msa0973770:intron 35.0%
! GTCTTTTCTGCTCATTACTA+GGG - chr6_4:6482602-6482621 Msa0973770:intron 35.0%
TTGAACCTTCCTATAAATGC+CGG + chr6_4:6482639-6482658 None:intergenic 35.0%
GTCAAAGTGACAAAAAGCAA+TGG - chr6_4:6482677-6482696 Msa0973770:intron 35.0%
AGAATCATAAGAGCTTCAAC+TGG + chr6_4:6482719-6482738 None:intergenic 35.0%
TCGTTGCGTCATTATTGTAT+TGG + chr6_4:6483276-6483295 None:intergenic 35.0%
TGTCTTTGTTAGACATAGTG+TGG + chr6_4:6483402-6483421 None:intergenic 35.0%
CCTGCAATATTAAATCACAC+AGG + chr6_4:6483427-6483446 None:intergenic 35.0%
CCTGTGTGATTTAATATTGC+AGG - chr6_4:6483424-6483443 Msa0973770:intron 35.0%
TAATATTGCAGGAGAAGGTA+CGG - chr6_4:6483435-6483454 Msa0973770:intron 35.0%
TGTAAATCTTAAGGTCATGG+CGG + chr6_4:6483486-6483505 None:intergenic 35.0%
!! CTTCTTTTGATTAGGAGGAA+AGG + chr6_4:6483553-6483572 None:intergenic 35.0%
CTTTCCTCCTAATCAAAAGA+AGG - chr6_4:6483551-6483570 Msa0973770:intron 35.0%
!! AAAGCCTTCTTTTGATTAGG+AGG + chr6_4:6483558-6483577 None:intergenic 35.0%
! GCTTTAAGTGGTTTAATCTG+TGG - chr6_4:6483573-6483592 Msa0973770:intron 35.0%
ACATCTGTAAACACATGCAA+TGG + chr6_4:6483616-6483635 None:intergenic 35.0%
AAAACCGAGATTGAAAACCT+TGG + chr6_4:6483852-6483871 None:intergenic 35.0%
CATTTCAACGGTTGTGAAAA+TGG - chr6_4:6483898-6483917 Msa0973770:intron 35.0%
!! ACGGTTGTGAAAATGGATTT+TGG - chr6_4:6483905-6483924 Msa0973770:intron 35.0%
TAGATAATACTAGCTGGCTA+GGG - chr6_4:6484087-6484106 Msa0973770:intron 35.0%
TTAGGTTCAACAACACATAC+TGG + chr6_4:6484193-6484212 None:intergenic 35.0%
! CTTTCTGGATTTAGCCTTTA+TGG + chr6_4:6484336-6484355 None:intergenic 35.0%
TCTATACTCTGATTGCTTTC+TGG + chr6_4:6484351-6484370 None:intergenic 35.0%
ATATTGCGGCACATATTGAA+GGG - chr6_4:6484414-6484433 Msa0973770:intron 35.0%
! GGTGCTAATGTTTTTCATCA+GGG + chr6_4:6484443-6484462 None:intergenic 35.0%
!! TGGTGCTAATGTTTTTCATC+AGG + chr6_4:6484444-6484463 None:intergenic 35.0%
CTTTGTCTCAAGCAATTTAC+TGG - chr6_4:6484582-6484601 Msa0973770:intron 35.0%
TCATAGAGTAACTAGAGAGT+GGG - chr6_4:6484610-6484629 Msa0973770:CDS 35.0%
! TCATTTTGTAGCCGACAAAT+TGG + chr6_4:6484636-6484655 None:intergenic 35.0%
TGTACTTCTCATACACTTCA+TGG - chr6_4:6484682-6484701 Msa0973770:five_prime_UTR 35.0%
!!! ATGGGTTTTTGGGTTTTTTC+AGG - chr6_4:6484771-6484790 Msa0973770:five_prime_UTR 35.0%
ATGGATCACATGAATTTCCT+TGG - chr6_4:6484842-6484861 Msa0973770:five_prime_UTR 35.0%
ATCACATGAATTTCCTTGGA+CGG - chr6_4:6484846-6484865 Msa0973770:five_prime_UTR 35.0%
! AGCGAGTAACGGAAATGATA+CGG + chr6_4:6473846-6473865 None:intergenic 40.0%
CGTCTGTGTTATGGAAAAGA+AGG - chr6_4:6474077-6474096 Msa0973770:intron 40.0%
TGCAAAGAAAGAGAGAACCT+CGG + chr6_4:6474115-6474134 None:intergenic 40.0%
GAAATTGGAGCTGTAATGCA+TGG + chr6_4:6475409-6475428 None:intergenic 40.0%
TCAACGCACTTTCAGTAATC+AGG - chr6_4:6475511-6475530 Msa0973770:intron 40.0%
GTAATCAGCTCTATAGGACA+AGG - chr6_4:6475688-6475707 Msa0973770:intron 40.0%
!! AGTGGTTGTAACTCTGAGAT+AGG - chr6_4:6475833-6475852 Msa0973770:intron 40.0%
TTTGTGTCTGTTTGGATGAG+TGG - chr6_4:6475927-6475946 Msa0973770:intron 40.0%
ACAACTAACCCGATAAGTCT+TGG - chr6_4:6476150-6476169 Msa0973770:intron 40.0%
GGGTGATCATAGTCATGTAA+GGG - chr6_4:6476424-6476443 Msa0973770:intron 40.0%
! TGTAAGGGTATAACACTTGG+AGG - chr6_4:6476439-6476458 Msa0973770:intron 40.0%
TGAGGAAAGGTCTGAATTAC+AGG + chr6_4:6476629-6476648 None:intergenic 40.0%
!! TCGGTCATGAAGAAGGTATT+GGG + chr6_4:6476667-6476686 None:intergenic 40.0%
! TTCGGTCATGAAGAAGGTAT+TGG + chr6_4:6476668-6476687 None:intergenic 40.0%
AATACCTTCTTCATGACCGA+AGG - chr6_4:6476667-6476686 Msa0973770:intron 40.0%
! TGACCGAAGGAAAGTATATG+AGG - chr6_4:6476680-6476699 Msa0973770:intron 40.0%
TGAACAATGACATGAAGGTC+AGG + chr6_4:6476891-6476910 None:intergenic 40.0%
AGTAATCAAGTTCTTCGGAC+GGG + chr6_4:6477073-6477092 None:intergenic 40.0%
ATAGAAACAGGCCAACGTAA+TGG + chr6_4:6477256-6477275 None:intergenic 40.0%
TAGCAATATCACGTAGTAGC+TGG - chr6_4:6477463-6477482 Msa0973770:intron 40.0%
ATCTATCACTTTCCGTCACT+AGG - chr6_4:6477750-6477769 Msa0973770:CDS 40.0%
CTGAAAAGGAAAAGCTGCAT+AGG + chr6_4:6477853-6477872 None:intergenic 40.0%
TGTGGTTATCAGCTTCACAA+AGG + chr6_4:6478114-6478133 None:intergenic 40.0%
TATTTAGGAAGGTGAGCTGT+AGG - chr6_4:6478182-6478201 Msa0973770:intron 40.0%
ACTCACTCTCCATAATTAGG+TGG - chr6_4:6478210-6478229 Msa0973770:intron 40.0%
CTCACTCTCCATAATTAGGT+GGG - chr6_4:6478211-6478230 Msa0973770:intron 40.0%
!!! GGGACTAAGCTGTTTTGATT+TGG - chr6_4:6478292-6478311 Msa0973770:CDS 40.0%
! CAAGCCTTATCACTCTAAGT+GGG - chr6_4:6478389-6478408 Msa0973770:intron 40.0%
! AAGCTCGTGTTACTATGACA+AGG + chr6_4:6478565-6478584 None:intergenic 40.0%
!! AATGGACTTGGTCTCTCTTT+TGG - chr6_4:6478666-6478685 Msa0973770:intron 40.0%
TGACTGTAGGTGTATACAGT+AGG - chr6_4:6478896-6478915 Msa0973770:intron 40.0%
GTTGTTATGAGAAACCCTGA+TGG - chr6_4:6478968-6478987 Msa0973770:intron 40.0%
GTCAAATTTCTGTTTCGAGC+AGG + chr6_4:6479066-6479085 None:intergenic 40.0%
GAAAGGTTTGCATTGCATTC+AGG - chr6_4:6479668-6479687 Msa0973770:intron 40.0%
TTGCATTGCATTCAGGCAAT+CGG - chr6_4:6479675-6479694 Msa0973770:intron 40.0%
TATGGTAGGTAAGATGTAGG+TGG - chr6_4:6480185-6480204 Msa0973770:intron 40.0%
!! GGTAAGATGTAGGTGGATTA+AGG - chr6_4:6480192-6480211 Msa0973770:intron 40.0%
AGAGAGAAGATGCCATTCAA+AGG + chr6_4:6480280-6480299 None:intergenic 40.0%
GTTTGATCTCCTTAGAAGTG+AGG - chr6_4:6480362-6480381 Msa0973770:intron 40.0%
! AGTTTTTGACATTGGCAGCA+TGG - chr6_4:6480468-6480487 Msa0973770:intron 40.0%
CCAACTCAAATAATTCCCCA+TGG + chr6_4:6480547-6480566 None:intergenic 40.0%
CCATGGGGAATTATTTGAGT+TGG - chr6_4:6480544-6480563 Msa0973770:CDS 40.0%
TTGCAGCAAAAGAGAGAACT+TGG + chr6_4:6480677-6480696 None:intergenic 40.0%
ACTTTCCATGGTAAAGTAGG+TGG + chr6_4:6480876-6480895 None:intergenic 40.0%
GCAAAAAGGGAAGACTGTAT+AGG + chr6_4:6481053-6481072 None:intergenic 40.0%
GTTCTATCACCACTGCAAAA+AGG + chr6_4:6481067-6481086 None:intergenic 40.0%
GGTGAAGTTAAAGGTTACTG+AGG - chr6_4:6481099-6481118 Msa0973770:intron 40.0%
AACAGAGTTACCTCAGATCT+TGG + chr6_4:6481166-6481185 None:intergenic 40.0%
!! TCTGAGGTAACTCTGTTTTG+TGG - chr6_4:6481169-6481188 Msa0973770:intron 40.0%
AATCATGGGTGTGAAGTTGA+AGG + chr6_4:6481404-6481423 None:intergenic 40.0%
ATAAAGCAAGGACAACCTCA+AGG + chr6_4:6481477-6481496 None:intergenic 40.0%
! ATTCTGATGATGTGACAAGG+AGG - chr6_4:6481568-6481587 Msa0973770:CDS 40.0%
! TTCTGATGATGTGACAAGGA+GGG - chr6_4:6481569-6481588 Msa0973770:CDS 40.0%
AGTTAAAGCTGTTCTTGAGG+AGG - chr6_4:6481880-6481899 Msa0973770:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr6_4:6482051-6482070 Msa0973770:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr6_4:6482052-6482071 Msa0973770:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr6_4:6482083-6482102 Msa0973770:intron 40.0%
GAAAGCAATGTCTTCTTGCA+CGG - chr6_4:6482379-6482398 Msa0973770:intron 40.0%
AAAGCAATGTCTTCTTGCAC+GGG - chr6_4:6482380-6482399 Msa0973770:intron 40.0%
!! AGGCTTTAAAAGGTAACTGC+AGG + chr6_4:6482521-6482540 None:intergenic 40.0%
! TTTTCTGCTCATTACTAGGG+AGG - chr6_4:6482605-6482624 Msa0973770:intron 40.0%
GACATTTCTCCGGCATTTAT+AGG - chr6_4:6482627-6482646 Msa0973770:intron 40.0%
TTTCTCCGGCATTTATAGGA+AGG - chr6_4:6482631-6482650 Msa0973770:intron 40.0%
GCAATGGTGAAGTTGAAGAA+CGG - chr6_4:6482693-6482712 Msa0973770:intron 40.0%
!!! TCTTTTTTAGGCCGAAGAAC+TGG - chr6_4:6482921-6482940 Msa0973770:intron 40.0%
!!! CTTTTTTAGGCCGAAGAACT+GGG - chr6_4:6482922-6482941 Msa0973770:intron 40.0%
! CTGAAGTGTCTACTTTGAAG+TGG - chr6_4:6483066-6483085 Msa0973770:intron 40.0%
AGAGACTTCGTTGAATACAC+AGG + chr6_4:6483185-6483204 None:intergenic 40.0%
CATGAACATCTACTTGACAG+TGG - chr6_4:6483376-6483395 Msa0973770:CDS 40.0%
! AATATTGCAGGAGAAGGTAC+GGG - chr6_4:6483436-6483455 Msa0973770:intron 40.0%
TACTGAAATGGAAGAAGCCA+AGG - chr6_4:6483832-6483851 Msa0973770:intron 40.0%
! GAAGCCAAGGTTTTCAATCT+CGG - chr6_4:6483845-6483864 Msa0973770:CDS 40.0%
TTCTGCGCCTTCTAGATTAT+AGG - chr6_4:6483875-6483894 Msa0973770:CDS 40.0%
GTAGATAATACTAGCTGGCT+AGG - chr6_4:6484086-6484105 Msa0973770:intron 40.0%
AGATAATACTAGCTGGCTAG+GGG - chr6_4:6484088-6484107 Msa0973770:intron 40.0%
ATAGGAATATACAGGGCTAC+AGG - chr6_4:6484387-6484406 Msa0973770:intron 40.0%
TAGGAATATACAGGGCTACA+GGG - chr6_4:6484388-6484407 Msa0973770:intron 40.0%
CATATTGCGGCACATATTGA+AGG - chr6_4:6484413-6484432 Msa0973770:intron 40.0%
GTCATAGAGTAACTAGAGAG+TGG - chr6_4:6484609-6484628 Msa0973770:CDS 40.0%
AATTTCCTTGGACGGTTGAT+GGG - chr6_4:6484854-6484873 Msa0973770:five_prime_UTR 40.0%
GGAAGTAATTCCGATGCATT+GGG + chr6_4:6484892-6484911 None:intergenic 40.0%
AGGAAGTAATTCCGATGCAT+TGG + chr6_4:6484893-6484912 None:intergenic 40.0%
ATCGGAATTACTTCCTGAGT+TGG - chr6_4:6484897-6484916 Msa0973770:five_prime_UTR 40.0%
CAAAATCGGCGTCTGTGTTA+TGG - chr6_4:6474068-6474087 Msa0973770:intron 45.0%
! CAGGTGTTTTCTGCACCTAT+GGG - chr6_4:6474804-6474823 Msa0973770:intron 45.0%
!! GGTCATACATTTTGGGGACA+AGG - chr6_4:6475288-6475307 Msa0973770:intron 45.0%
TGCTGCTCAAAGTTGTTGCA+CGG - chr6_4:6475453-6475472 Msa0973770:intron 45.0%
TTCTGGATATCCCCTCGAAA+AGG - chr6_4:6475591-6475610 Msa0973770:intron 45.0%
CCTTAAAGCAGCATATGCCT+CGG + chr6_4:6475617-6475636 None:intergenic 45.0%
AGGTCAGTTAGAGGATGCAA+AGG - chr6_4:6476372-6476391 Msa0973770:intron 45.0%
CGGGTGATCATAGTCATGTA+AGG - chr6_4:6476423-6476442 Msa0973770:intron 45.0%
GGGGCTCCAATTCATTTATG+AGG + chr6_4:6476647-6476666 None:intergenic 45.0%
!! CGGTCATGAAGAAGGTATTG+GGG + chr6_4:6476666-6476685 None:intergenic 45.0%
CTTTCCTTCGGTCATGAAGA+AGG + chr6_4:6476674-6476693 None:intergenic 45.0%
TGTCGCTGGTATGTGTTATC+TGG - chr6_4:6476804-6476823 Msa0973770:intron 45.0%
! CAAGGGCATATCTTGGAACA+GGG + chr6_4:6477037-6477056 None:intergenic 45.0%
! ACAAGGGCATATCTTGGAAC+AGG + chr6_4:6477038-6477057 None:intergenic 45.0%
CGGGACTTCCCTAATTACAA+GGG + chr6_4:6477054-6477073 None:intergenic 45.0%
ACGGGACTTCCCTAATTACA+AGG + chr6_4:6477055-6477074 None:intergenic 45.0%
!!! AAGTTGATGGCATGCGCTTT+TGG - chr6_4:6477117-6477136 Msa0973770:intron 45.0%
CATCAAATCAGTGCCCATGT+TGG + chr6_4:6477411-6477430 None:intergenic 45.0%
TATTATCCCAGTTCAGCAGG+TGG - chr6_4:6478145-6478164 Msa0973770:intron 45.0%
CCACTTAGAGTGATAAGGCT+TGG + chr6_4:6478391-6478410 None:intergenic 45.0%
! CCAAGCCTTATCACTCTAAG+TGG - chr6_4:6478388-6478407 Msa0973770:intron 45.0%
AGCTCCCACTTAGAGTGATA+AGG + chr6_4:6478396-6478415 None:intergenic 45.0%
TCCTGAATATGCTCATGCTG+AGG - chr6_4:6478919-6478938 Msa0973770:intron 45.0%
AATATGCTCATGCTGAGGCA+AGG - chr6_4:6478924-6478943 Msa0973770:intron 45.0%
AGGAAGTCTCCTGTTGTTGA+TGG - chr6_4:6478944-6478963 Msa0973770:intron 45.0%
TATGAGAAACCCTGATGGGA+AGG - chr6_4:6478973-6478992 Msa0973770:intron 45.0%
CACTTACTTCCTTCCCATCA+GGG + chr6_4:6478985-6479004 None:intergenic 45.0%
GTTTCGAGCAGGATTCTATC+TGG + chr6_4:6479055-6479074 None:intergenic 45.0%
ATGATTCTGCCTGTGTTCTG+CGG - chr6_4:6480805-6480824 Msa0973770:intron 45.0%
TAAAGTAGGTGGAATCGCTG+AGG + chr6_4:6480865-6480884 None:intergenic 45.0%
CGATTCCACCTACTTTACCA+TGG - chr6_4:6480868-6480887 Msa0973770:intron 45.0%
ACCTTCTGAACTAACTCGTC+AGG - chr6_4:6480911-6480930 Msa0973770:intron 45.0%
CCTTCTGAACTAACTCGTCA+GGG - chr6_4:6480912-6480931 Msa0973770:intron 45.0%
! CGTCAGGGTAGTGGTATTAA+TGG - chr6_4:6480927-6480946 Msa0973770:intron 45.0%
! ACAGTCTTCCCTTTTTGCAG+TGG - chr6_4:6481055-6481074 Msa0973770:intron 45.0%
CAGGTAAAATACCTAGTGCG+AGG + chr6_4:6481338-6481357 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr6_4:6482047-6482066 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr6_4:6482079-6482098 Msa0973770:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr6_4:6482082-6482101 Msa0973770:intron 45.0%
ATGTCTTCTTGCACGGGATA+AGG - chr6_4:6482386-6482405 Msa0973770:intron 45.0%
TACTAGGGAGGACATTTCTC+CGG - chr6_4:6482617-6482636 Msa0973770:intron 45.0%
! GTCACTTTGACCCACTTTAG+TGG + chr6_4:6482668-6482687 None:intergenic 45.0%
! ATATTGCAGGAGAAGGTACG+GGG - chr6_4:6483437-6483456 Msa0973770:intron 45.0%
GGAAAGGTGAATGCTACACA+GGG + chr6_4:6483537-6483556 None:intergenic 45.0%
AGGAAAGGTGAATGCTACAC+AGG + chr6_4:6483538-6483557 None:intergenic 45.0%
TTCTAGGTCGAGAAGACCTT+TGG + chr6_4:6483654-6483673 None:intergenic 45.0%
AAAGGTCTTCTCGACCTAGA+AGG - chr6_4:6483653-6483672 Msa0973770:intron 45.0%
AAGGTCTTCTCGACCTAGAA+GGG - chr6_4:6483654-6483673 Msa0973770:intron 45.0%
GGAAAAACACAGACCAGGAT+TGG + chr6_4:6483689-6483708 None:intergenic 45.0%
TCAGAGGAAAAACACAGACC+AGG + chr6_4:6483694-6483713 None:intergenic 45.0%
!! ATTTTCAAGCCCGTCCAACA+TGG + chr6_4:6483807-6483826 None:intergenic 45.0%
GTTTCTCGGCATTTCACAGA+TGG - chr6_4:6483936-6483955 Msa0973770:intron 45.0%
ATGTATGTCTTTCCCAAGCC+TGG + chr6_4:6484539-6484558 None:intergenic 45.0%
TAGAGAGTGGGCCAATTTGT+CGG - chr6_4:6484622-6484641 Msa0973770:CDS 45.0%
GCAAACACAGTTGAGAGCAA+TGG - chr6_4:6484823-6484842 Msa0973770:five_prime_UTR 45.0%
GAATTTCCTTGGACGGTTGA+TGG - chr6_4:6484853-6484872 Msa0973770:five_prime_UTR 45.0%
! ATTTCCTTGGACGGTTGATG+GGG - chr6_4:6484855-6484874 Msa0973770:five_prime_UTR 45.0%
TGGAATTCCACCCAATGCAT+CGG - chr6_4:6484879-6484898 Msa0973770:five_prime_UTR 45.0%
AGTAATTCCGATGCATTGGG+TGG + chr6_4:6484889-6484908 None:intergenic 45.0%
!!! AAATTTATTATAATTTTAAG+TGG - chr6_4:6478435-6478454 Msa0973770:intron 5.0%
TTTCCTTCCCCCGCAAAACT+CGG - chr6_4:6473805-6473824 Msa0973770:CDS 50.0%
! AACGGAATCGCCGAGTTTTG+CGG + chr6_4:6473818-6473837 None:intergenic 50.0%
! GCAGGTGTTTTCTGCACCTA+TGG - chr6_4:6474803-6474822 Msa0973770:intron 50.0%
GCTGCTCAAAGTTGTTGCAC+GGG - chr6_4:6475454-6475473 Msa0973770:intron 50.0%
CTGCTCAAAGTTGTTGCACG+GGG - chr6_4:6475455-6475474 Msa0973770:intron 50.0%
! ATATGCCTCGGCCTTTTCGA+GGG + chr6_4:6475605-6475624 None:intergenic 50.0%
!! CCGAGGCATATGCTGCTTTA+AGG - chr6_4:6475614-6475633 Msa0973770:intron 50.0%
ATGTGTTACGTGGTTGTCGC+TGG - chr6_4:6476790-6476809 Msa0973770:intron 50.0%
CAGGCCAACGTAATGGTCAT+GGG + chr6_4:6477249-6477268 None:intergenic 50.0%
ACAGGCCAACGTAATGGTCA+TGG + chr6_4:6477250-6477269 None:intergenic 50.0%
ATACCTCCACCTGCTGAACT+GGG + chr6_4:6478154-6478173 None:intergenic 50.0%
! TTCAGCAGGTGGAGGTATGA+AGG - chr6_4:6478156-6478175 Msa0973770:intron 50.0%
GTCCAGTGAGTTCCATTCAG+AGG - chr6_4:6478716-6478735 Msa0973770:intron 50.0%
CACCTCTGAATGGAACTCAC+TGG + chr6_4:6478721-6478740 None:intergenic 50.0%
TCACTCTTCGCACCTCTGAA+TGG + chr6_4:6478731-6478750 None:intergenic 50.0%
! ATTCAGAGGTGCGAAGAGTG+AGG - chr6_4:6478730-6478749 Msa0973770:intron 50.0%
TTAACATCTGTCCCTCCGGT+TGG + chr6_4:6478789-6478808 None:intergenic 50.0%
AACCGGAGGGACAGATGTTA+AGG - chr6_4:6478788-6478807 Msa0973770:intron 50.0%
GACCTTAACATCTGTCCCTC+CGG + chr6_4:6478793-6478812 None:intergenic 50.0%
GAGGGACAGATGTTAAGGTC+TGG - chr6_4:6478793-6478812 Msa0973770:intron 50.0%
GCCTCAGCATGAGCATATTC+AGG + chr6_4:6478923-6478942 None:intergenic 50.0%
CCACTTACTTCCTTCCCATC+AGG + chr6_4:6478986-6479005 None:intergenic 50.0%
CCTGATGGGAAGGAAGTAAG+TGG - chr6_4:6478983-6479002 Msa0973770:intron 50.0%
TTCATCACAGCCTCTGCTGT+TGG - chr6_4:6479339-6479358 Msa0973770:intron 50.0%
AATTCTGATACCGCTGGCAG+CGG + chr6_4:6479372-6479391 None:intergenic 50.0%
TCTTTCTGCCTGCAGGTTTG+TGG - chr6_4:6480339-6480358 Msa0973770:intron 50.0%
CTTTCTGCCTGCAGGTTTGT+GGG - chr6_4:6480340-6480359 Msa0973770:intron 50.0%
GATCAAACCCACAAACCTGC+AGG + chr6_4:6480350-6480369 None:intergenic 50.0%
ATGAGCGTCCCTCACTTCTA+AGG + chr6_4:6480374-6480393 None:intergenic 50.0%
CAACATCTTCCGCAGAACAC+AGG + chr6_4:6480817-6480836 None:intergenic 50.0%
GGAATCGCTGAGGAAAGATG+AGG + chr6_4:6480855-6480874 None:intergenic 50.0%
CCCTGACGAGTTAGTTCAGA+AGG + chr6_4:6480915-6480934 None:intergenic 50.0%
GAACTAACTCGTCAGGGTAG+TGG - chr6_4:6480918-6480937 Msa0973770:intron 50.0%
GTTAGATGCCACACGAATGC+TGG - chr6_4:6481310-6481329 Msa0973770:intron 50.0%
GATGATGTGACAAGGAGGGA+AGG - chr6_4:6481573-6481592 Msa0973770:CDS 50.0%
AGAGACGTGCTCTTTCTCCA+TGG - chr6_4:6482417-6482436 Msa0973770:intron 50.0%
GAGACGTGCTCTTTCTCCAT+GGG - chr6_4:6482418-6482437 Msa0973770:intron 50.0%
GGTGGTGTTCTTACACATGC+TGG - chr6_4:6482746-6482765 Msa0973770:intron 50.0%
TACACATGCTGGCAGAAAGC+AGG - chr6_4:6482757-6482776 Msa0973770:intron 50.0%
! CTGCACAACACAAGCTTGCT+TGG + chr6_4:6483232-6483251 None:intergenic 50.0%
CATGGCGGTATGTACTATGG+AGG + chr6_4:6483471-6483490 None:intergenic 50.0%
GGTCATGGCGGTATGTACTA+TGG + chr6_4:6483474-6483493 None:intergenic 50.0%
!!! TCTGCAGCTGCTTTTGCCAA+AGG - chr6_4:6483635-6483654 Msa0973770:intron 50.0%
!! TTGGTGTTAGCTGCCCTTCT+AGG + chr6_4:6483670-6483689 None:intergenic 50.0%
TAGCAAGGACTCCTCCATGT+TGG - chr6_4:6483790-6483809 Msa0973770:intron 50.0%
AAGGACTCCTCCATGTTGGA+CGG - chr6_4:6483794-6483813 Msa0973770:intron 50.0%
CTCAACTGTGTTTGCACTGG+AGG + chr6_4:6484818-6484837 None:intergenic 50.0%
GCTCTCAACTGTGTTTGCAC+TGG + chr6_4:6484821-6484840 None:intergenic 50.0%
! ACGGAATCGCCGAGTTTTGC+GGG + chr6_4:6473817-6473836 None:intergenic 55.0%
GAAGGTGAAATGTGGCTCCG+AGG - chr6_4:6474095-6474114 Msa0973770:intron 55.0%
ATATCCCCTCGAAAAGGCCG+AGG - chr6_4:6475597-6475616 Msa0973770:intron 55.0%
!! TATGCCTCGGCCTTTTCGAG+GGG + chr6_4:6475604-6475623 None:intergenic 55.0%
! CATATGCCTCGGCCTTTTCG+AGG + chr6_4:6475606-6475625 None:intergenic 55.0%
GCCACCCATGACCATTACGT+TGG - chr6_4:6477242-6477261 Msa0973770:intron 55.0%
GCCAACGTAATGGTCATGGG+TGG + chr6_4:6477246-6477265 None:intergenic 55.0%
GCTGCATAGGACTCGTGTGA+TGG + chr6_4:6477840-6477859 None:intergenic 55.0%
TATCCCAGTTCAGCAGGTGG+AGG - chr6_4:6478148-6478167 Msa0973770:intron 55.0%
CATACCTCCACCTGCTGAAC+TGG + chr6_4:6478155-6478174 None:intergenic 55.0%
GAGGCTGTGATGAAGCCCTT+TGG + chr6_4:6479333-6479352 None:intergenic 55.0%
! TGGTGGACGACCAAGATCTG+AGG - chr6_4:6481153-6481172 Msa0973770:intron 55.0%
!! GAATGCTGGTTCCTCGCACT+AGG - chr6_4:6481324-6481343 Msa0973770:intron 55.0%
TTGAAGCTCCCGCATACGCA+GGG + chr6_4:6482122-6482141 None:intergenic 55.0%
ATTGAAGCTCCCGCATACGC+AGG + chr6_4:6482123-6482142 None:intergenic 55.0%
ATGCGGGAGCTTCAATGCAC+CGG - chr6_4:6482127-6482146 Msa0973770:intron 55.0%
TTCTGATGAGGGTCGTGTGC+AGG - chr6_4:6483507-6483526 Msa0973770:intron 55.0%
AGGGCAGCTAACACCAATCC+TGG - chr6_4:6483673-6483692 Msa0973770:intron 55.0%
AGGACTCCTCCATGTTGGAC+GGG - chr6_4:6483795-6483814 Msa0973770:intron 55.0%
TTCAAGCCCGTCCAACATGG+AGG + chr6_4:6483804-6483823 None:intergenic 55.0%
CTGGCTAGGGGAGAGTCAAA+TGG - chr6_4:6484100-6484119 Msa0973770:intron 55.0%
GGGCTACAGGGCACATATTG+CGG - chr6_4:6484400-6484419 Msa0973770:intron 55.0%
! GGAATCGCCGAGTTTTGCGG+GGG + chr6_4:6473815-6473834 None:intergenic 60.0%
! CGGAATCGCCGAGTTTTGCG+GGG + chr6_4:6473816-6473835 None:intergenic 60.0%
GTGCGAAGAGTGAGGCGTGA+AGG - chr6_4:6478738-6478757 Msa0973770:intron 60.0%
CGGCAGTTTGCCAACAGCAG+AGG + chr6_4:6479352-6479371 None:intergenic 60.0%
GCGAGGAACCAGCATTCGTG+TGG + chr6_4:6481321-6481340 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr6_4:6482095-6482114 Msa0973770:intron 60.0%
TGCGGGAGCTTCAATGCACC+GGG - chr6_4:6482128-6482147 Msa0973770:intron 60.0%
! TCGCCGAGTTTTGCGGGGGA+AGG + chr6_4:6473811-6473830 None:intergenic 65.0%
TGGCAAACTGCCGCTGCCAG+CGG - chr6_4:6479359-6479378 Msa0973770:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr6_4:6482097-6482116 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr6_4:6482110-6482129 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr6_4:6482111-6482130 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr6_4:6482110-6482129 Msa0973770:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr6_4:6482111-6482130 Msa0973770:intron 65.0%
CCAGCCCCATCAACCGTCCA+AGG + chr6_4:6484862-6484881 None:intergenic 65.0%
!! CCTTGGACGGTTGATGGGGC+TGG - chr6_4:6484859-6484878 Msa0973770:five_prime_UTR 65.0%
CGCATACGCAGGGTCCGGGA+AGG + chr6_4:6482112-6482131 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr6_4:6482116-6482135 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr6_4:6482117-6482136 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 6473786 6484921 6473786 ID=Msa0973770;Name=Msa0973770
chr6_4 mRNA 6473786 6484921 6473786 ID=Msa0973770-mRNA-1;Parent=Msa0973770;Name=Msa0973770-mRNA-1;_AED=0.22;_eAED=0.22;_QI=259|0.94|0.95|1|0.94|0.95|20|0|608
chr6_4 exon 6473786 6473914 6473786 ID=Msa0973770-mRNA-1:exon:2619;Parent=Msa0973770-mRNA-1
chr6_4 exon 6474854 6474928 6474854 ID=Msa0973770-mRNA-1:exon:2618;Parent=Msa0973770-mRNA-1
chr6_4 exon 6475013 6475075 6475013 ID=Msa0973770-mRNA-1:exon:2617;Parent=Msa0973770-mRNA-1
chr6_4 exon 6475179 6475261 6475179 ID=Msa0973770-mRNA-1:exon:2616;Parent=Msa0973770-mRNA-1
chr6_4 exon 6475734 6475776 6475734 ID=Msa0973770-mRNA-1:exon:2615;Parent=Msa0973770-mRNA-1
chr6_4 exon 6475929 6476084 6475929 ID=Msa0973770-mRNA-1:exon:2614;Parent=Msa0973770-mRNA-1
chr6_4 exon 6476806 6476887 6476806 ID=Msa0973770-mRNA-1:exon:2613;Parent=Msa0973770-mRNA-1
chr6_4 exon 6477362 6477432 6477362 ID=Msa0973770-mRNA-1:exon:2612;Parent=Msa0973770-mRNA-1
chr6_4 exon 6477533 6477632 6477533 ID=Msa0973770-mRNA-1:exon:2611;Parent=Msa0973770-mRNA-1
chr6_4 exon 6477707 6477910 6477707 ID=Msa0973770-mRNA-1:exon:2610;Parent=Msa0973770-mRNA-1
chr6_4 exon 6478268 6478353 6478268 ID=Msa0973770-mRNA-1:exon:2609;Parent=Msa0973770-mRNA-1
chr6_4 exon 6479710 6479802 6479710 ID=Msa0973770-mRNA-1:exon:2608;Parent=Msa0973770-mRNA-1
chr6_4 exon 6479898 6480002 6479898 ID=Msa0973770-mRNA-1:exon:2607;Parent=Msa0973770-mRNA-1
chr6_4 exon 6480515 6480585 6480515 ID=Msa0973770-mRNA-1:exon:2606;Parent=Msa0973770-mRNA-1
chr6_4 exon 6481540 6481693 6481540 ID=Msa0973770-mRNA-1:exon:2605;Parent=Msa0973770-mRNA-1
chr6_4 exon 6482006 6482069 6482006 ID=Msa0973770-mRNA-1:exon:2604;Parent=Msa0973770-mRNA-1
chr6_4 exon 6483069 6483152 6483069 ID=Msa0973770-mRNA-1:exon:2603;Parent=Msa0973770-mRNA-1
chr6_4 exon 6483372 6483418 6483372 ID=Msa0973770-mRNA-1:exon:2602;Parent=Msa0973770-mRNA-1
chr6_4 exon 6483841 6483900 6483841 ID=Msa0973770-mRNA-1:exon:2601;Parent=Msa0973770-mRNA-1
chr6_4 exon 6484609 6484921 6484609 ID=Msa0973770-mRNA-1:exon:2600;Parent=Msa0973770-mRNA-1
chr6_4 five_prime_UTR 6484663 6484921 6484663 ID=Msa0973770-mRNA-1:five_prime_utr;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6484609 6484662 6484609 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6483841 6483900 6483841 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6483372 6483418 6483372 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6483069 6483152 6483069 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6482006 6482069 6482006 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6481540 6481693 6481540 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6480515 6480585 6480515 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6479898 6480002 6479898 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6479710 6479802 6479710 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6478268 6478353 6478268 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6477707 6477910 6477707 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6477533 6477632 6477533 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6477362 6477432 6477362 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6476806 6476887 6476806 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6475929 6476084 6475929 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6475734 6475776 6475734 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6475179 6475261 6475179 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6475013 6475075 6475013 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6474854 6474928 6474854 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
chr6_4 CDS 6473786 6473914 6473786 ID=Msa0973770-mRNA-1:cds;Parent=Msa0973770-mRNA-1
Gene Sequence

>Msa0973770

ATGGAGAAGATTACAGAGAAAATCAAAATCGGCGTCTGTGTTATGGAAAAGAAGGTGTTTTCTGCACCTATGGGACAGATATTTGATAGGTTACAAGCGTTTGGAGAATTCGAAGTCATACATTTTGGGGACAAGGTGATTCTTGAAGATCCAATAGAGAGCTGGCCCATATGTGATTGTTTGATTGCTTTCTATTCTTCTGGATATCCCCTCGAAAAGGCCGAGGCATATGCTGCTTTAAGGAAACCTTTCCTCATAAATGAATTGGAGCCCCAATACCTTCTTCATGACCGAAGGAAAGTATATGAGCAACTTGAACTGTTTGGAATCCCTGTTCCAAGATATGCCCTTGTAATTAGGGAAGTCCCGTCCGAAGAACTTGATTACTTTATTGAGGAAGAAGATTTTGTTGAAGTTGATGGCATGCGCTTTTGGAAGCCATTTGTAGAGAAGCCTATTGATGCTGATAACCACAGTATAATGATATATTATCCCAGTTCAGCAGGTGGAGGTATGAAGGAATTATTTAGGAAGGTTGGTAATAGGTCCAGTGAGTTCCATTCAGAGGTGCGAAGAGTGAGGCGTGAAGGCTCCTATATATATGAGGAATTTATGCCAACCGGAGGGACAGATGTTAAGGTGTATACAGTAGGTCCTGAATATGCTCATGCTGAGGCAAGGAAGTCTCCTGTTGTTGATGGTGTTGTTATGAGAAACCCTGATGGGAAGGAAGTTTGTGGGTTTGATCTCCTTAGAAGTGAGGGACGCTCATATGTTTGTGATGTGAATGGTTGGAGCTTTGTCAAAAACTCACACAAGTATTATGATGATTCTGCCTGTGTTCTGCGGAAGATGTTGCTAGATGCAAAAGCTCCTCATCTTTCCTCAGCGATTCCACCTACTTTACCATGGAAAGTAAATGAGATAATGCAACCTTCTGAACTAACTCGTCAGGGTAGTGGTATTAATGGATATTTTGGACAATCTGAGGAACTACGATCTGTAATTGCTGTAATTCGACATGGTGATAGAACTCCTAAACAGAAGGTGAAGTTAAAGGTTACTGAGGAAAAGCTACTGAGCTTAATAATGAAATATAATGGTGGACGACCAAGATCTGAGACAAAACTTAAAAGTGCTGTTCAGCTGCAAGATCTGTTAGATGCCACACGAATGCTGGTTCCTCGCACTAGACAAGATCTAGAAGGTGATAACGAAGCTGAAGATCTTGAGCATGCTGAAAAGCTTCTTCAAGTTAAAGCTGTTCTTGAGGAGGGAGGACATTTCTCCGGCATTTATAGGAAGGTTCAATTAAAGCCACTAAAGTGGGTCAAAGTGACAAAAAGCAATGGTGAAGTTGAAGAACGGCCAGTTGAAGCTCTTATGATTCTTAAATATGGTGGTGTTCTTACACATGCTGGCAGAAAGCAGGCCGAAGAACTGGGAAGATATTTTCGAAATAAAATATATCCAGGAGAAGGTACGGGGCTTCTTCGCCTCCATAGTACATACCGCCATGACCTTAAGATTTACAGTTCTGATGAGGGTCGTGTGCAGATGTCTGCAGCTGCTTTTGCCAAAGGTCTTCTCGACCTAGAAGGGCAGCTAACACCAATCCTGGTTTCCCTTGTTAGCAAGGACTCCTCCATGTTGGACGGGCTTGAAAATGCACATACTGAAATGGAAGAAGCCAAGGCTCGATTGAATGATATTATTACCTCCAGTGCAAACACAGTTGAGAGCAATGGATCACATGAATTTCCTTGGACGGTTGATGGGGCTGGAATTCCACCCAATGCATCGGAATTACTTCCTGAGTTGGTA

Protein sequence

>Msa0973770

MEKITEKIKIGVCVMEKKVFSAPMGQIFDRLQAFGEFEVIHFGDKVILEDPIESWPICDCLIAFYSSGYPLEKAEAYAALRKPFLINELEPQYLLHDRRKVYEQLELFGIPVPRYALVIREVPSEELDYFIEEEDFVEVDGMRFWKPFVEKPIDADNHSIMIYYPSSAGGGMKELFRKVGNRSSEFHSEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVCGFDLLRSEGRSYVCDVNGWSFVKNSHKYYDDSACVLRKMLLDAKAPHLSSAIPPTLPWKVNEIMQPSELTRQGSGINGYFGQSEELRSVIAVIRHGDRTPKQKVKLKVTEEKLLSLIMKYNGGRPRSETKLKSAVQLQDLLDATRMLVPRTRQDLEGDNEAEDLEHAEKLLQVKAVLEEGGHFSGIYRKVQLKPLKWVKVTKSNGEVEERPVEALMILKYGGVLTHAGRKQAEELGRYFRNKIYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLENAHTEMEEAKARLNDIITSSANTVESNGSHEFPWTVDGAGIPPNASELLPELV