Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490150 | XP_024631836.2 | 96.606 | 383 | 13 | 0 | 1 | 383 | 1 | 383 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490150 | A0A396JPB9 | 76.154 | 390 | 86 | 1 | 1 | 383 | 1 | 390 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0135660 | Msa0490150 | 0.804332 | 2.272938e-49 | -8.615850e-47 |
| Msa0171760 | Msa0490150 | 0.805697 | 1.177867e-49 | -8.615850e-47 |
| Msa0198900 | Msa0490150 | 0.961550 | 7.839620e-120 | -8.615850e-47 |
| Msa0198910 | Msa0490150 | 0.837327 | 5.549381e-57 | -8.615850e-47 |
| Msa0251630 | Msa0490150 | 0.913106 | 9.039789e-84 | -8.615850e-47 |
| Msa0251640 | Msa0490150 | 0.852338 | 4.928732e-61 | -8.615850e-47 |
| Msa0266690 | Msa0490150 | 0.814313 | 1.642219e-51 | -8.615850e-47 |
| Msa0490140 | Msa0490150 | 0.844462 | 7.448071e-59 | -8.615850e-47 |
| Msa0490150 | Msa0514320 | 0.806349 | 8.589564e-50 | -8.615850e-47 |
| Msa0490150 | Msa0645300 | 0.804457 | 2.140993e-49 | -8.615850e-47 |
| Msa0490150 | Msa0767730 | 0.870718 | 1.180549e-66 | -8.615850e-47 |
| Msa0490150 | Msa1388510 | 0.821603 | 3.697646e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490150 | MtrunA17_Chr1g0172731 | 76.154 | 390 | 86 | 1 | 1 | 383 | 1 | 390 | 0.0 | 641 |
| Msa0490150 | MtrunA17_Chr1g0190171 | 75.385 | 390 | 89 | 1 | 1 | 383 | 1 | 390 | 0.0 | 637 |
| Msa0490150 | MtrunA17_Chr2g0321401 | 74.603 | 252 | 58 | 1 | 1 | 246 | 1 | 252 | 3.09e-142 | 406 |
| Msa0490150 | MtrunA17_Chr8g0334561 | 73.518 | 253 | 60 | 1 | 1 | 246 | 1 | 253 | 8.31e-140 | 400 |
| Msa0490150 | MtrunA17_Chr2g0285471 | 79.891 | 184 | 37 | 0 | 63 | 246 | 1 | 184 | 3.97e-109 | 319 |
| Msa0490150 | MtrunA17_Chr1g0182341 | 42.697 | 356 | 160 | 6 | 3 | 350 | 15 | 334 | 7.36e-90 | 277 |
| Msa0490150 | MtrunA17_Chr6g0477141 | 42.638 | 326 | 182 | 3 | 15 | 338 | 96 | 418 | 9.24e-84 | 264 |
| Msa0490150 | MtrunA17_Chr6g0478531 | 40.517 | 348 | 197 | 6 | 35 | 380 | 15 | 354 | 2.67e-83 | 260 |
| Msa0490150 | MtrunA17_Chr7g0226311 | 42.857 | 322 | 173 | 6 | 59 | 377 | 9 | 322 | 4.25e-74 | 235 |
| Msa0490150 | MtrunA17_Chr8g0391981 | 37.808 | 365 | 205 | 7 | 18 | 378 | 36 | 382 | 2.18e-70 | 228 |
| Msa0490150 | MtrunA17_Chr1g0207391 | 40.129 | 309 | 162 | 8 | 45 | 343 | 74 | 369 | 4.14e-67 | 219 |
| Msa0490150 | MtrunA17_Chr7g0267201 | 48.125 | 160 | 75 | 2 | 66 | 217 | 1 | 160 | 2.11e-46 | 157 |
| Msa0490150 | MtrunA17_Chr3g0140031 | 65.179 | 112 | 32 | 1 | 1 | 105 | 1 | 112 | 2.78e-45 | 153 |
| Msa0490150 | MtrunA17_Chr1g0211031 | 63.768 | 69 | 23 | 1 | 314 | 382 | 1 | 67 | 5.08e-21 | 87.0 |
| Msa0490150 | MtrunA17_Chr8g0370251 | 63.768 | 69 | 23 | 1 | 314 | 382 | 1 | 67 | 5.08e-21 | 87.0 |
| Msa0490150 | MtrunA17_Chr2g0295621 | 60.870 | 69 | 25 | 1 | 314 | 382 | 1 | 67 | 3.07e-20 | 84.7 |
| Msa0490150 | MtrunA17_Chr5g0427241 | 60.870 | 69 | 25 | 1 | 314 | 382 | 1 | 67 | 3.39e-20 | 84.7 |
| Msa0490150 | MtrunA17_Chr1g0154421 | 36.242 | 149 | 93 | 2 | 14 | 161 | 2 | 149 | 1.20e-19 | 85.1 |
| Msa0490150 | MtrunA17_Chr5g0420851 | 90.476 | 42 | 4 | 0 | 342 | 383 | 1 | 42 | 2.99e-19 | 81.3 |
| Msa0490150 | MtrunA17_Chr4g0018411 | 36.364 | 121 | 71 | 3 | 246 | 364 | 10 | 126 | 3.14e-15 | 72.8 |
| Msa0490150 | MtrunA17_Chr1g0151751 | 57.692 | 52 | 19 | 1 | 368 | 416 | 202 | 253 | 1.22e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490150 | AT5G41980.1 | 37.101 | 345 | 186 | 7 | 33 | 371 | 15 | 334 | 2.03e-70 | 227 |
| Msa0490150 | AT1G43722.1 | 35.897 | 312 | 186 | 5 | 4 | 308 | 16 | 320 | 2.90e-59 | 196 |
| Msa0490150 | AT5G28730.1 | 34.016 | 244 | 127 | 6 | 33 | 273 | 2 | 214 | 1.73e-38 | 141 |
| Msa0490150 | AT3G30525.1 | 36.686 | 169 | 101 | 2 | 172 | 335 | 1 | 168 | 9.66e-30 | 114 |
| Msa0490150 | AT5G35695.1 | 42.336 | 137 | 62 | 3 | 210 | 343 | 25 | 147 | 5.35e-28 | 110 |
| Msa0490150 | AT5G28950.1 | 44.318 | 88 | 49 | 0 | 154 | 241 | 11 | 98 | 2.52e-20 | 87.4 |
| Msa0490150 | AT4G10890.3 | 45.055 | 91 | 49 | 1 | 221 | 311 | 71 | 160 | 3.91e-16 | 80.9 |
| Msa0490150 | AT4G10890.1 | 45.055 | 91 | 49 | 1 | 221 | 311 | 71 | 160 | 3.91e-16 | 80.9 |
| Msa0490150 | AT4G10890.2 | 45.055 | 91 | 49 | 1 | 221 | 311 | 71 | 160 | 3.91e-16 | 80.9 |
Find 83 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTATCACTCAAGTTTA+AGG | 0.112859 | 3_4:+11519821 | Msa0490150:CDS |
| AGTGACCAAACTAGATTTAT+TGG | 0.193012 | 3_4:+11519439 | Msa0490150:CDS |
| TTATCGTAGACCAGTTAATT+TGG | 0.251482 | 3_4:+11520041 | Msa0490150:CDS |
| CCGTTCTTGATTTCCCATTC+AGG | 0.264023 | 3_4:-11520191 | None:intergenic |
| TTAGAAAGTATTAGCAATCT+TGG | 0.278395 | 3_4:-11520285 | None:intergenic |
| TTCTTCCAATAAATCTAGTT+TGG | 0.301437 | 3_4:-11519444 | None:intergenic |
| TGAGATGAATCCAAATTAAC+TGG | 0.308066 | 3_4:-11520051 | None:intergenic |
| CTCATTGCAAAATGAACTAT+TGG | 0.311324 | 3_4:+11518879 | None:intergenic |
| CCATGGGAACGCCGAAAATC+AGG | 0.316313 | 3_4:-11519772 | None:intergenic |
| CCCCATCGGTGTTGGATAAC+CGG | 0.331584 | 3_4:-11519713 | None:intergenic |
| TGTGTCTTAATTGTGAATTT+AGG | 0.331819 | 3_4:-11519904 | None:intergenic |
| TTCAAAGTGATCCACGATAT+TGG | 0.339686 | 3_4:+11519353 | Msa0490150:CDS |
| TGCACAATAGAAAGAACTTT+TGG | 0.340416 | 3_4:+11519844 | Msa0490150:CDS |
| TTCTTTAGTGGCTGCGCTGA+TGG | 0.369897 | 3_4:+11518943 | Msa0490150:CDS |
| TATTAGAAGGAATGCTGATA+TGG | 0.386332 | 3_4:+11519966 | Msa0490150:CDS |
| CGTTCTTGATTTCCCATTCA+GGG | 0.400779 | 3_4:-11520190 | None:intergenic |
| AACTAGATTTATTGGAAGAA+AGG | 0.401366 | 3_4:+11519447 | Msa0490150:CDS |
| CTATACATAACTTTATTAGA+AGG | 0.401801 | 3_4:+11519953 | Msa0490150:CDS |
| GCTGCGCTGATGGGTGAGTA+TGG | 0.402936 | 3_4:+11518953 | Msa0490150:CDS |
| TGTAGAACTAGTGAGCTAAC+AGG | 0.402946 | 3_4:+11519001 | Msa0490150:CDS |
| TTCTACCCCTATGTGATTAG+TGG | 0.407094 | 3_4:-11519143 | None:intergenic |
| TGCACTAAATTAGTTGATCA+TGG | 0.412015 | 3_4:+11519112 | Msa0490150:CDS |
| CCAACACCGATGGGGTATCT+TGG | 0.413955 | 3_4:+11519721 | Msa0490150:CDS |
| TTCTGCCCCTTGCAAAGAAA+TGG | 0.414516 | 3_4:+11520241 | Msa0490150:CDS |
| ACTAGATTTATTGGAAGAAA+GGG | 0.418213 | 3_4:+11519448 | Msa0490150:CDS |
| TACGATAATCATCATGATCA+AGG | 0.435864 | 3_4:-11520026 | None:intergenic |
| GCAATGTTCTTACTTGTTGT+TGG | 0.446958 | 3_4:+11519175 | Msa0490150:CDS |
| TTAATACCTGGAGGAGGATG+TGG | 0.473645 | 3_4:-11519604 | None:intergenic |
| GTGAGCTAACAGGGCATGCA+TGG | 0.475764 | 3_4:+11519011 | Msa0490150:CDS |
| CCAAGATACCCCATCGGTGT+TGG | 0.475954 | 3_4:-11519721 | None:intergenic |
| TTCTTACTTGTTGTTGGACA+TGG | 0.479104 | 3_4:+11519181 | Msa0490150:CDS |
| TTGAGGCTTTATATATTCGA+TGG | 0.486174 | 3_4:-11519299 | None:intergenic |
| TTTAGGTATGTATTATTTGG+TGG | 0.486635 | 3_4:+11519687 | Msa0490150:intron |
| ATGTATTATTTGGTGGATGC+CGG | 0.486645 | 3_4:+11519694 | Msa0490150:CDS |
| TCTTTAGTGGCTGCGCTGAT+GGG | 0.486854 | 3_4:+11518944 | Msa0490150:CDS |
| TAAGGAGGAGCACCCTGAAT+GGG | 0.487377 | 3_4:+11520178 | Msa0490150:intron |
| CGTCGATTTCAATCGGTATG+AGG | 0.488598 | 3_4:+11519990 | Msa0490150:CDS |
| TTGCATCCATTTCTTTGCAA+GGG | 0.497599 | 3_4:-11520247 | None:intergenic |
| ATGTAATGGCTGTATGTGAT+TGG | 0.504425 | 3_4:+11519485 | Msa0490150:CDS |
| GCCGGTTATCCAACACCGAT+GGG | 0.518380 | 3_4:+11519712 | Msa0490150:CDS |
| TTGTTATGAGATGTTTCGAA+TGG | 0.520234 | 3_4:+11519066 | Msa0490150:CDS |
| ATTGCATCCATTTCTTTGCA+AGG | 0.521624 | 3_4:-11520248 | None:intergenic |
| AATAAATCTAGTTTGGTCAC+TGG | 0.523191 | 3_4:-11519437 | None:intergenic |
| TTGCAAAGAAATGGATGCAA+TGG | 0.525471 | 3_4:+11520250 | Msa0490150:CDS |
| TTAAGGAGGAGCACCCTGAA+TGG | 0.526077 | 3_4:+11520177 | Msa0490150:intron |
| TGATAACGTTCACATCTGTA+TGG | 0.526253 | 3_4:-11519745 | None:intergenic |
| TAAAGCCCACTAATCACATA+GGG | 0.528574 | 3_4:+11519137 | Msa0490150:CDS |
| TCTACCCCTATGTGATTAGT+GGG | 0.529840 | 3_4:-11519142 | None:intergenic |
| CAAGATCCTTTGTTCAGTGA+TGG | 0.537243 | 3_4:+11519319 | Msa0490150:CDS |
| TGAAGTCGTTGTTGCAACAA+TGG | 0.546744 | 3_4:+11519930 | Msa0490150:CDS |
| GATTTGCATTTGTGAGAGCA+TGG | 0.547923 | 3_4:-11519573 | None:intergenic |
| AACATCTCATAACAACGAGT+TGG | 0.551166 | 3_4:-11519058 | None:intergenic |
| TGCCGGTTATCCAACACCGA+TGG | 0.556028 | 3_4:+11519711 | Msa0490150:CDS |
| CATGGGAACGCCGAAAATCA+GGG | 0.556357 | 3_4:-11519771 | None:intergenic |
| ATATGGACGTCGATTTCAAT+CGG | 0.561835 | 3_4:+11519983 | Msa0490150:CDS |
| TCACAGTTTCACCTGAGTGT+TGG | 0.562860 | 3_4:-11519234 | None:intergenic |
| ACTTGTTGTTGGACATGGAG+TGG | 0.572106 | 3_4:+11519186 | Msa0490150:CDS |
| CTTGTTGTTGGACATGGAGT+GGG | 0.572884 | 3_4:+11519187 | Msa0490150:CDS |
| CAAGAAAGGTTCCAACACTC+AGG | 0.576876 | 3_4:+11519223 | Msa0490150:CDS |
| ATATCCGACACAAAATGTAA+TGG | 0.578336 | 3_4:+11519471 | Msa0490150:CDS |
| GTAACAGAATGATTCAAGAA+AGG | 0.580146 | 3_4:+11519209 | Msa0490150:CDS |
| TTAAAGCCCACTAATCACAT+AGG | 0.582939 | 3_4:+11519136 | Msa0490150:CDS |
| TGCATCCATTTCTTTGCAAG+GGG | 0.587959 | 3_4:-11520246 | None:intergenic |
| GTTAGCTCACTAGTTCTACA+TGG | 0.598706 | 3_4:-11518998 | None:intergenic |
| ATAATATTAATACCTGGAGG+AGG | 0.608585 | 3_4:-11519610 | None:intergenic |
| TGGGTGAAAGAAGTGTTACA+AGG | 0.613940 | 3_4:+11519031 | Msa0490150:CDS |
| GTAGAACTAGTGAGCTAACA+GGG | 0.616141 | 3_4:+11519002 | Msa0490150:CDS |
| TGAGCTAACAGGGCATGCAT+GGG | 0.618880 | 3_4:+11519012 | Msa0490150:CDS |
| GTCACTGGCACTAACCACAC+AGG | 0.619956 | 3_4:-11519422 | None:intergenic |
| TCACTGAACAAAGGATCTTG+AGG | 0.620273 | 3_4:-11519316 | None:intergenic |
| ACGATAATCATCATGATCAA+GGG | 0.621055 | 3_4:-11520025 | None:intergenic |
| AACATGATTCATCTCAGATG+AGG | 0.624817 | 3_4:-11520091 | None:intergenic |
| GCATGACCATCACTGAACAA+AGG | 0.638583 | 3_4:-11519325 | None:intergenic |
| CCTGAATGGGAAATCAAGAA+CGG | 0.657945 | 3_4:+11520191 | Msa0490150:CDS |
| AATGCTATAGGAGCAATCGA+TGG | 0.684778 | 3_4:+11519388 | Msa0490150:CDS |
| TCACTGGCACTAACCACACA+GGG | 0.685550 | 3_4:-11519421 | None:intergenic |
| GGGTGAAAGAAGTGTTACAA+GGG | 0.685898 | 3_4:+11519032 | Msa0490150:CDS |
| CCGGTTATCCAACACCGATG+GGG | 0.699683 | 3_4:+11519713 | Msa0490150:CDS |
| TATGGACCAAGATACCCCAT+CGG | 0.700535 | 3_4:-11519727 | None:intergenic |
| AAAGCCCACTAATCACATAG+GGG | 0.730444 | 3_4:+11519138 | Msa0490150:CDS |
| TGGTACGCATATTCCCTGTG+TGG | 0.730498 | 3_4:+11519408 | Msa0490150:CDS |
| GGGAACGCCGAAAATCAGGG+AGG | 0.802967 | 3_4:-11519768 | None:intergenic |
| TGGGTTTGAAAATAACAACG+AGG | 0.807645 | 3_4:+11519792 | Msa0490150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTAATTTATTTTT+AGG | + | chr3_4:11519670-11519689 | Msa0490150:intron | 0.0% |
| !!! | TTATAATTTAATTTATTTTT+AGG | + | chr3_4:11519670-11519689 | Msa0490150:intron | 0.0% |
| !! | TACTAATAAATAAGTTGTAA+AGG | - | chr3_4:11519636-11519655 | None:intergenic | 15.0% |
| !!! | ATTTTTAGGTATGTATTATT+TGG | + | chr3_4:11519684-11519703 | Msa0490150:intron | 15.0% |
| !! | TACTAATAAATAAGTTGTAA+AGG | - | chr3_4:11519636-11519655 | None:intergenic | 15.0% |
| !!! | ATTTTTAGGTATGTATTATT+TGG | + | chr3_4:11519684-11519703 | Msa0490150:intron | 15.0% |
| !! | TAAAGGATAATATTAATACC+TGG | - | chr3_4:11519619-11519638 | None:intergenic | 20.0% |
| !! | ATTATTATCACTCAAGTTTA+AGG | + | chr3_4:11519821-11519840 | Msa0490150:CDS | 20.0% |
| !! | CTATACATAACTTTATTAGA+AGG | + | chr3_4:11519953-11519972 | Msa0490150:CDS | 20.0% |
| !!! | AGTATTGTAGTAATGTTTTA+AGG | + | chr3_4:11520160-11520179 | Msa0490150:intron | 20.0% |
| !! | TAAAGGATAATATTAATACC+TGG | - | chr3_4:11519619-11519638 | None:intergenic | 20.0% |
| !! | ATTATTATCACTCAAGTTTA+AGG | + | chr3_4:11519821-11519840 | Msa0490150:CDS | 20.0% |
| !! | CTATACATAACTTTATTAGA+AGG | + | chr3_4:11519953-11519972 | Msa0490150:CDS | 20.0% |
| !!! | AGTATTGTAGTAATGTTTTA+AGG | + | chr3_4:11520160-11520179 | Msa0490150:intron | 20.0% |
| ! | GTGCAAAGTTTATGAAAAAT+AGG | - | chr3_4:11519097-11519116 | None:intergenic | 25.0% |
| ! | CCTATAGCATTCTTAAAAAA+TGG | - | chr3_4:11519379-11519398 | None:intergenic | 25.0% |
| !!! | CCATTTTTTAAGAATGCTAT+AGG | + | chr3_4:11519376-11519395 | Msa0490150:CDS | 25.0% |
| ! | TTCTTCCAATAAATCTAGTT+TGG | - | chr3_4:11519447-11519466 | None:intergenic | 25.0% |
| ! | AACTAGATTTATTGGAAGAA+AGG | + | chr3_4:11519447-11519466 | Msa0490150:CDS | 25.0% |
| ! | ACTAGATTTATTGGAAGAAA+GGG | + | chr3_4:11519448-11519467 | Msa0490150:CDS | 25.0% |
| ! | TTTAGGTATGTATTATTTGG+TGG | + | chr3_4:11519687-11519706 | Msa0490150:intron | 25.0% |
| ! | TGTGTCTTAATTGTGAATTT+AGG | - | chr3_4:11519907-11519926 | None:intergenic | 25.0% |
| !!! | ATTGTAGTAATGTTTTAAGG+AGG | + | chr3_4:11520163-11520182 | Msa0490150:intron | 25.0% |
| !!! | TTAGAAAGTATTAGCAATCT+TGG | - | chr3_4:11520288-11520307 | None:intergenic | 25.0% |
| ! | GTGCAAAGTTTATGAAAAAT+AGG | - | chr3_4:11519097-11519116 | None:intergenic | 25.0% |
| ! | CCTATAGCATTCTTAAAAAA+TGG | - | chr3_4:11519379-11519398 | None:intergenic | 25.0% |
| !!! | CCATTTTTTAAGAATGCTAT+AGG | + | chr3_4:11519376-11519395 | Msa0490150:CDS | 25.0% |
| ! | TTCTTCCAATAAATCTAGTT+TGG | - | chr3_4:11519447-11519466 | None:intergenic | 25.0% |
| ! | AACTAGATTTATTGGAAGAA+AGG | + | chr3_4:11519447-11519466 | Msa0490150:CDS | 25.0% |
| ! | ACTAGATTTATTGGAAGAAA+GGG | + | chr3_4:11519448-11519467 | Msa0490150:CDS | 25.0% |
| ! | TTTAGGTATGTATTATTTGG+TGG | + | chr3_4:11519687-11519706 | Msa0490150:intron | 25.0% |
| ! | TGTGTCTTAATTGTGAATTT+AGG | - | chr3_4:11519907-11519926 | None:intergenic | 25.0% |
| !!! | ATTGTAGTAATGTTTTAAGG+AGG | + | chr3_4:11520163-11520182 | Msa0490150:intron | 25.0% |
| !!! | TTAGAAAGTATTAGCAATCT+TGG | - | chr3_4:11520288-11520307 | None:intergenic | 25.0% |
| ! | TTTTGAACAAGCTTCTTTAG+TGG | + | chr3_4:11518931-11518950 | Msa0490150:CDS | 30.0% |
| TTGTTATGAGATGTTTCGAA+TGG | + | chr3_4:11519066-11519085 | Msa0490150:CDS | 30.0% | |
| TGCACTAAATTAGTTGATCA+TGG | + | chr3_4:11519112-11519131 | Msa0490150:CDS | 30.0% | |
| GTAACAGAATGATTCAAGAA+AGG | + | chr3_4:11519209-11519228 | Msa0490150:CDS | 30.0% | |
| ! | TTGAGGCTTTATATATTCGA+TGG | - | chr3_4:11519302-11519321 | None:intergenic | 30.0% |
| TTAAAAAATGGCCAATATCG+TGG | - | chr3_4:11519367-11519386 | None:intergenic | 30.0% | |
| ! | AATAAATCTAGTTTGGTCAC+TGG | - | chr3_4:11519440-11519459 | None:intergenic | 30.0% |
| AGTGACCAAACTAGATTTAT+TGG | + | chr3_4:11519439-11519458 | Msa0490150:CDS | 30.0% | |
| ATATCCGACACAAAATGTAA+TGG | + | chr3_4:11519471-11519490 | Msa0490150:CDS | 30.0% | |
| ATAATATTAATACCTGGAGG+AGG | - | chr3_4:11519613-11519632 | None:intergenic | 30.0% | |
| AGGATAATATTAATACCTGG+AGG | - | chr3_4:11519616-11519635 | None:intergenic | 30.0% | |
| !!! | GTTGTTATTTTCAAACCCAT+GGG | - | chr3_4:11519791-11519810 | None:intergenic | 30.0% |
| ! | TGCACAATAGAAAGAACTTT+TGG | + | chr3_4:11519844-11519863 | Msa0490150:CDS | 30.0% |
| !! | TAGAAAGAACTTTTGGTGTA+TGG | + | chr3_4:11519851-11519870 | Msa0490150:CDS | 30.0% |
| TATTAGAAGGAATGCTGATA+TGG | + | chr3_4:11519966-11519985 | Msa0490150:CDS | 30.0% | |
| ACGATAATCATCATGATCAA+GGG | - | chr3_4:11520028-11520047 | None:intergenic | 30.0% | |
| TACGATAATCATCATGATCA+AGG | - | chr3_4:11520029-11520048 | None:intergenic | 30.0% | |
| TTATCGTAGACCAGTTAATT+TGG | + | chr3_4:11520041-11520060 | Msa0490150:CDS | 30.0% | |
| TGAGATGAATCCAAATTAAC+TGG | - | chr3_4:11520054-11520073 | None:intergenic | 30.0% | |
| GAGATCAAATTATAGAGTTC+AGG | + | chr3_4:11520127-11520146 | Msa0490150:intron | 30.0% | |
| ! | TGTCTATTTTCAAAAGGCAA+AGG | + | chr3_4:11520217-11520236 | Msa0490150:CDS | 30.0% |
| ! | TTTTGAACAAGCTTCTTTAG+TGG | + | chr3_4:11518931-11518950 | Msa0490150:CDS | 30.0% |
| TTGTTATGAGATGTTTCGAA+TGG | + | chr3_4:11519066-11519085 | Msa0490150:CDS | 30.0% | |
| TGCACTAAATTAGTTGATCA+TGG | + | chr3_4:11519112-11519131 | Msa0490150:CDS | 30.0% | |
| GTAACAGAATGATTCAAGAA+AGG | + | chr3_4:11519209-11519228 | Msa0490150:CDS | 30.0% | |
| ! | TTGAGGCTTTATATATTCGA+TGG | - | chr3_4:11519302-11519321 | None:intergenic | 30.0% |
| TTAAAAAATGGCCAATATCG+TGG | - | chr3_4:11519367-11519386 | None:intergenic | 30.0% | |
| ! | AATAAATCTAGTTTGGTCAC+TGG | - | chr3_4:11519440-11519459 | None:intergenic | 30.0% |
| AGTGACCAAACTAGATTTAT+TGG | + | chr3_4:11519439-11519458 | Msa0490150:CDS | 30.0% | |
| ATATCCGACACAAAATGTAA+TGG | + | chr3_4:11519471-11519490 | Msa0490150:CDS | 30.0% | |
| ATAATATTAATACCTGGAGG+AGG | - | chr3_4:11519613-11519632 | None:intergenic | 30.0% | |
| AGGATAATATTAATACCTGG+AGG | - | chr3_4:11519616-11519635 | None:intergenic | 30.0% | |
| !!! | GTTGTTATTTTCAAACCCAT+GGG | - | chr3_4:11519791-11519810 | None:intergenic | 30.0% |
| ! | TGCACAATAGAAAGAACTTT+TGG | + | chr3_4:11519844-11519863 | Msa0490150:CDS | 30.0% |
| !! | TAGAAAGAACTTTTGGTGTA+TGG | + | chr3_4:11519851-11519870 | Msa0490150:CDS | 30.0% |
| TATTAGAAGGAATGCTGATA+TGG | + | chr3_4:11519966-11519985 | Msa0490150:CDS | 30.0% | |
| ACGATAATCATCATGATCAA+GGG | - | chr3_4:11520028-11520047 | None:intergenic | 30.0% | |
| TACGATAATCATCATGATCA+AGG | - | chr3_4:11520029-11520048 | None:intergenic | 30.0% | |
| TTATCGTAGACCAGTTAATT+TGG | + | chr3_4:11520041-11520060 | Msa0490150:CDS | 30.0% | |
| TGAGATGAATCCAAATTAAC+TGG | - | chr3_4:11520054-11520073 | None:intergenic | 30.0% | |
| GAGATCAAATTATAGAGTTC+AGG | + | chr3_4:11520127-11520146 | Msa0490150:intron | 30.0% | |
| ! | TGTCTATTTTCAAAAGGCAA+AGG | + | chr3_4:11520217-11520236 | Msa0490150:CDS | 30.0% |
| AACATCTCATAACAACGAGT+TGG | - | chr3_4:11519061-11519080 | None:intergenic | 35.0% | |
| TTAAAGCCCACTAATCACAT+AGG | + | chr3_4:11519136-11519155 | Msa0490150:CDS | 35.0% | |
| TAAAGCCCACTAATCACATA+GGG | + | chr3_4:11519137-11519156 | Msa0490150:CDS | 35.0% | |
| !! | GCAATGTTCTTACTTGTTGT+TGG | + | chr3_4:11519175-11519194 | Msa0490150:CDS | 35.0% |
| !! | TTCTTACTTGTTGTTGGACA+TGG | + | chr3_4:11519181-11519200 | Msa0490150:CDS | 35.0% |
| TTCAAAGTGATCCACGATAT+TGG | + | chr3_4:11519353-11519372 | Msa0490150:CDS | 35.0% | |
| ! | ACAGCCATTACATTTTGTGT+CGG | - | chr3_4:11519478-11519497 | None:intergenic | 35.0% |
| ATGTAATGGCTGTATGTGAT+TGG | + | chr3_4:11519485-11519504 | Msa0490150:CDS | 35.0% | |
| !!! | TGCTTCACTTTTGTTTTAGC+TGG | + | chr3_4:11519514-11519533 | Msa0490150:CDS | 35.0% |
| !!! | TCACTTTTGTTTTAGCTGGA+TGG | + | chr3_4:11519518-11519537 | Msa0490150:CDS | 35.0% |
| !!! | CACTTTTGTTTTAGCTGGAT+GGG | + | chr3_4:11519519-11519538 | Msa0490150:CDS | 35.0% |
| ! | ATGTATTATTTGGTGGATGC+CGG | + | chr3_4:11519694-11519713 | Msa0490150:CDS | 35.0% |
| ! | TGATAACGTTCACATCTGTA+TGG | - | chr3_4:11519748-11519767 | None:intergenic | 35.0% |
| !!! | CGTTGTTATTTTCAAACCCA+TGG | - | chr3_4:11519792-11519811 | None:intergenic | 35.0% |
| TGGGTTTGAAAATAACAACG+AGG | + | chr3_4:11519792-11519811 | Msa0490150:CDS | 35.0% | |
| !! | ATATGGACGTCGATTTCAAT+CGG | + | chr3_4:11519983-11520002 | Msa0490150:CDS | 35.0% |
| AACATGATTCATCTCAGATG+AGG | - | chr3_4:11520094-11520113 | None:intergenic | 35.0% | |
| GATGAATCATGTTCGAAACT+CGG | + | chr3_4:11520101-11520120 | Msa0490150:intron | 35.0% | |
| ! | CGGTTCTGTCTATTTTCAAA+AGG | + | chr3_4:11520211-11520230 | Msa0490150:CDS | 35.0% |
| TTGCATCCATTTCTTTGCAA+GGG | - | chr3_4:11520250-11520269 | None:intergenic | 35.0% | |
| ATTGCATCCATTTCTTTGCA+AGG | - | chr3_4:11520251-11520270 | None:intergenic | 35.0% | |
| TTGCAAAGAAATGGATGCAA+TGG | + | chr3_4:11520250-11520269 | Msa0490150:CDS | 35.0% | |
| AACATCTCATAACAACGAGT+TGG | - | chr3_4:11519061-11519080 | None:intergenic | 35.0% | |
| TTAAAGCCCACTAATCACAT+AGG | + | chr3_4:11519136-11519155 | Msa0490150:CDS | 35.0% | |
| TAAAGCCCACTAATCACATA+GGG | + | chr3_4:11519137-11519156 | Msa0490150:CDS | 35.0% | |
| !! | GCAATGTTCTTACTTGTTGT+TGG | + | chr3_4:11519175-11519194 | Msa0490150:CDS | 35.0% |
| !! | TTCTTACTTGTTGTTGGACA+TGG | + | chr3_4:11519181-11519200 | Msa0490150:CDS | 35.0% |
| TTCAAAGTGATCCACGATAT+TGG | + | chr3_4:11519353-11519372 | Msa0490150:CDS | 35.0% | |
| ! | ACAGCCATTACATTTTGTGT+CGG | - | chr3_4:11519478-11519497 | None:intergenic | 35.0% |
| ATGTAATGGCTGTATGTGAT+TGG | + | chr3_4:11519485-11519504 | Msa0490150:CDS | 35.0% | |
| !!! | TGCTTCACTTTTGTTTTAGC+TGG | + | chr3_4:11519514-11519533 | Msa0490150:CDS | 35.0% |
| !!! | TCACTTTTGTTTTAGCTGGA+TGG | + | chr3_4:11519518-11519537 | Msa0490150:CDS | 35.0% |
| !!! | CACTTTTGTTTTAGCTGGAT+GGG | + | chr3_4:11519519-11519538 | Msa0490150:CDS | 35.0% |
| ! | ATGTATTATTTGGTGGATGC+CGG | + | chr3_4:11519694-11519713 | Msa0490150:CDS | 35.0% |
| ! | TGATAACGTTCACATCTGTA+TGG | - | chr3_4:11519748-11519767 | None:intergenic | 35.0% |
| !!! | CGTTGTTATTTTCAAACCCA+TGG | - | chr3_4:11519792-11519811 | None:intergenic | 35.0% |
| TGGGTTTGAAAATAACAACG+AGG | + | chr3_4:11519792-11519811 | Msa0490150:CDS | 35.0% | |
| !! | ATATGGACGTCGATTTCAAT+CGG | + | chr3_4:11519983-11520002 | Msa0490150:CDS | 35.0% |
| AACATGATTCATCTCAGATG+AGG | - | chr3_4:11520094-11520113 | None:intergenic | 35.0% | |
| GATGAATCATGTTCGAAACT+CGG | + | chr3_4:11520101-11520120 | Msa0490150:intron | 35.0% | |
| ! | CGGTTCTGTCTATTTTCAAA+AGG | + | chr3_4:11520211-11520230 | Msa0490150:CDS | 35.0% |
| TTGCATCCATTTCTTTGCAA+GGG | - | chr3_4:11520250-11520269 | None:intergenic | 35.0% | |
| ATTGCATCCATTTCTTTGCA+AGG | - | chr3_4:11520251-11520270 | None:intergenic | 35.0% | |
| TTGCAAAGAAATGGATGCAA+TGG | + | chr3_4:11520250-11520269 | Msa0490150:CDS | 35.0% | |
| !! | GTTAGCTCACTAGTTCTACA+TGG | - | chr3_4:11519001-11519020 | None:intergenic | 40.0% |
| TGTAGAACTAGTGAGCTAAC+AGG | + | chr3_4:11519001-11519020 | Msa0490150:CDS | 40.0% | |
| GTAGAACTAGTGAGCTAACA+GGG | + | chr3_4:11519002-11519021 | Msa0490150:CDS | 40.0% | |
| !! | TGGGTGAAAGAAGTGTTACA+AGG | + | chr3_4:11519031-11519050 | Msa0490150:CDS | 40.0% |
| !! | GGGTGAAAGAAGTGTTACAA+GGG | + | chr3_4:11519032-11519051 | Msa0490150:CDS | 40.0% |
| AAAGCCCACTAATCACATAG+GGG | + | chr3_4:11519138-11519157 | Msa0490150:CDS | 40.0% | |
| TCTACCCCTATGTGATTAGT+GGG | - | chr3_4:11519145-11519164 | None:intergenic | 40.0% | |
| TTCTACCCCTATGTGATTAG+TGG | - | chr3_4:11519146-11519165 | None:intergenic | 40.0% | |
| TCACTGAACAAAGGATCTTG+AGG | - | chr3_4:11519319-11519338 | None:intergenic | 40.0% | |
| CAAGATCCTTTGTTCAGTGA+TGG | + | chr3_4:11519319-11519338 | Msa0490150:CDS | 40.0% | |
| AATGCTATAGGAGCAATCGA+TGG | + | chr3_4:11519388-11519407 | Msa0490150:CDS | 40.0% | |
| !!! | TTTGTTTTAGCTGGATGGGA+AGG | + | chr3_4:11519523-11519542 | Msa0490150:CDS | 40.0% |
| GTCAAAAACACGAGCATCAT+GGG | - | chr3_4:11519554-11519573 | None:intergenic | 40.0% | |
| GATTTGCATTTGTGAGAGCA+TGG | - | chr3_4:11519576-11519595 | None:intergenic | 40.0% | |
| ! | GTTATCACCTCCCTGATTTT+CGG | + | chr3_4:11519761-11519780 | Msa0490150:CDS | 40.0% |
| TGAAGTCGTTGTTGCAACAA+TGG | + | chr3_4:11519930-11519949 | Msa0490150:CDS | 40.0% | |
| CGTTCTTGATTTCCCATTCA+GGG | - | chr3_4:11520193-11520212 | None:intergenic | 40.0% | |
| CCTGAATGGGAAATCAAGAA+CGG | + | chr3_4:11520191-11520210 | Msa0490150:CDS | 40.0% | |
| TGCATCCATTTCTTTGCAAG+GGG | - | chr3_4:11520249-11520268 | None:intergenic | 40.0% | |
| !! | GTTAGCTCACTAGTTCTACA+TGG | - | chr3_4:11519001-11519020 | None:intergenic | 40.0% |
| TGTAGAACTAGTGAGCTAAC+AGG | + | chr3_4:11519001-11519020 | Msa0490150:CDS | 40.0% | |
| GTAGAACTAGTGAGCTAACA+GGG | + | chr3_4:11519002-11519021 | Msa0490150:CDS | 40.0% | |
| !! | TGGGTGAAAGAAGTGTTACA+AGG | + | chr3_4:11519031-11519050 | Msa0490150:CDS | 40.0% |
| !! | GGGTGAAAGAAGTGTTACAA+GGG | + | chr3_4:11519032-11519051 | Msa0490150:CDS | 40.0% |
| AAAGCCCACTAATCACATAG+GGG | + | chr3_4:11519138-11519157 | Msa0490150:CDS | 40.0% | |
| TCTACCCCTATGTGATTAGT+GGG | - | chr3_4:11519145-11519164 | None:intergenic | 40.0% | |
| TTCTACCCCTATGTGATTAG+TGG | - | chr3_4:11519146-11519165 | None:intergenic | 40.0% | |
| TCACTGAACAAAGGATCTTG+AGG | - | chr3_4:11519319-11519338 | None:intergenic | 40.0% | |
| CAAGATCCTTTGTTCAGTGA+TGG | + | chr3_4:11519319-11519338 | Msa0490150:CDS | 40.0% | |
| AATGCTATAGGAGCAATCGA+TGG | + | chr3_4:11519388-11519407 | Msa0490150:CDS | 40.0% | |
| !!! | TTTGTTTTAGCTGGATGGGA+AGG | + | chr3_4:11519523-11519542 | Msa0490150:CDS | 40.0% |
| GTCAAAAACACGAGCATCAT+GGG | - | chr3_4:11519554-11519573 | None:intergenic | 40.0% | |
| GATTTGCATTTGTGAGAGCA+TGG | - | chr3_4:11519576-11519595 | None:intergenic | 40.0% | |
| ! | GTTATCACCTCCCTGATTTT+CGG | + | chr3_4:11519761-11519780 | Msa0490150:CDS | 40.0% |
| TGAAGTCGTTGTTGCAACAA+TGG | + | chr3_4:11519930-11519949 | Msa0490150:CDS | 40.0% | |
| CGTTCTTGATTTCCCATTCA+GGG | - | chr3_4:11520193-11520212 | None:intergenic | 40.0% | |
| CCTGAATGGGAAATCAAGAA+CGG | + | chr3_4:11520191-11520210 | Msa0490150:CDS | 40.0% | |
| TGCATCCATTTCTTTGCAAG+GGG | - | chr3_4:11520249-11520268 | None:intergenic | 40.0% | |
| !! | ACTTGTTGTTGGACATGGAG+TGG | + | chr3_4:11519186-11519205 | Msa0490150:CDS | 45.0% |
| !! | CTTGTTGTTGGACATGGAGT+GGG | + | chr3_4:11519187-11519206 | Msa0490150:CDS | 45.0% |
| CAAGAAAGGTTCCAACACTC+AGG | + | chr3_4:11519223-11519242 | Msa0490150:CDS | 45.0% | |
| TCACAGTTTCACCTGAGTGT+TGG | - | chr3_4:11519237-11519256 | None:intergenic | 45.0% | |
| GCATGACCATCACTGAACAA+AGG | - | chr3_4:11519328-11519347 | None:intergenic | 45.0% | |
| GGTCAAAAACACGAGCATCA+TGG | - | chr3_4:11519555-11519574 | None:intergenic | 45.0% | |
| ! | AATTTTCCACATCCTCCTCC+AGG | + | chr3_4:11519598-11519617 | Msa0490150:CDS | 45.0% |
| TTAATACCTGGAGGAGGATG+TGG | - | chr3_4:11519607-11519626 | None:intergenic | 45.0% | |
| TATGGACCAAGATACCCCAT+CGG | - | chr3_4:11519730-11519749 | None:intergenic | 45.0% | |
| !! | CGTCGATTTCAATCGGTATG+AGG | + | chr3_4:11519990-11520009 | Msa0490150:CDS | 45.0% |
| CCGTTCTTGATTTCCCATTC+AGG | - | chr3_4:11520194-11520213 | None:intergenic | 45.0% | |
| TTCTGCCCCTTGCAAAGAAA+TGG | + | chr3_4:11520241-11520260 | Msa0490150:CDS | 45.0% | |
| !! | ACTTGTTGTTGGACATGGAG+TGG | + | chr3_4:11519186-11519205 | Msa0490150:CDS | 45.0% |
| !! | CTTGTTGTTGGACATGGAGT+GGG | + | chr3_4:11519187-11519206 | Msa0490150:CDS | 45.0% |
| CAAGAAAGGTTCCAACACTC+AGG | + | chr3_4:11519223-11519242 | Msa0490150:CDS | 45.0% | |
| TCACAGTTTCACCTGAGTGT+TGG | - | chr3_4:11519237-11519256 | None:intergenic | 45.0% | |
| GCATGACCATCACTGAACAA+AGG | - | chr3_4:11519328-11519347 | None:intergenic | 45.0% | |
| GGTCAAAAACACGAGCATCA+TGG | - | chr3_4:11519555-11519574 | None:intergenic | 45.0% | |
| ! | AATTTTCCACATCCTCCTCC+AGG | + | chr3_4:11519598-11519617 | Msa0490150:CDS | 45.0% |
| TTAATACCTGGAGGAGGATG+TGG | - | chr3_4:11519607-11519626 | None:intergenic | 45.0% | |
| TATGGACCAAGATACCCCAT+CGG | - | chr3_4:11519730-11519749 | None:intergenic | 45.0% | |
| !! | CGTCGATTTCAATCGGTATG+AGG | + | chr3_4:11519990-11520009 | Msa0490150:CDS | 45.0% |
| CCGTTCTTGATTTCCCATTC+AGG | - | chr3_4:11520194-11520213 | None:intergenic | 45.0% | |
| TTCTGCCCCTTGCAAAGAAA+TGG | + | chr3_4:11520241-11520260 | Msa0490150:CDS | 45.0% | |
| TTCTTTAGTGGCTGCGCTGA+TGG | + | chr3_4:11518943-11518962 | Msa0490150:CDS | 50.0% | |
| ! | TCTTTAGTGGCTGCGCTGAT+GGG | + | chr3_4:11518944-11518963 | Msa0490150:CDS | 50.0% |
| TGAGCTAACAGGGCATGCAT+GGG | + | chr3_4:11519012-11519031 | Msa0490150:CDS | 50.0% | |
| TGGTACGCATATTCCCTGTG+TGG | + | chr3_4:11519408-11519427 | Msa0490150:CDS | 50.0% | |
| TCACTGGCACTAACCACACA+GGG | - | chr3_4:11519424-11519443 | None:intergenic | 50.0% | |
| CATGGGAACGCCGAAAATCA+GGG | - | chr3_4:11519774-11519793 | None:intergenic | 50.0% | |
| ! | CTGATTTTCGGCGTTCCCAT+GGG | + | chr3_4:11519773-11519792 | Msa0490150:CDS | 50.0% |
| !! | TTAAGGAGGAGCACCCTGAA+TGG | + | chr3_4:11520177-11520196 | Msa0490150:intron | 50.0% |
| !! | TAAGGAGGAGCACCCTGAAT+GGG | + | chr3_4:11520178-11520197 | Msa0490150:intron | 50.0% |
| TTCTTTAGTGGCTGCGCTGA+TGG | + | chr3_4:11518943-11518962 | Msa0490150:CDS | 50.0% | |
| ! | TCTTTAGTGGCTGCGCTGAT+GGG | + | chr3_4:11518944-11518963 | Msa0490150:CDS | 50.0% |
| TGAGCTAACAGGGCATGCAT+GGG | + | chr3_4:11519012-11519031 | Msa0490150:CDS | 50.0% | |
| TGGTACGCATATTCCCTGTG+TGG | + | chr3_4:11519408-11519427 | Msa0490150:CDS | 50.0% | |
| TCACTGGCACTAACCACACA+GGG | - | chr3_4:11519424-11519443 | None:intergenic | 50.0% | |
| CATGGGAACGCCGAAAATCA+GGG | - | chr3_4:11519774-11519793 | None:intergenic | 50.0% | |
| ! | CTGATTTTCGGCGTTCCCAT+GGG | + | chr3_4:11519773-11519792 | Msa0490150:CDS | 50.0% |
| !! | TTAAGGAGGAGCACCCTGAA+TGG | + | chr3_4:11520177-11520196 | Msa0490150:intron | 50.0% |
| !! | TAAGGAGGAGCACCCTGAAT+GGG | + | chr3_4:11520178-11520197 | Msa0490150:intron | 50.0% |
| GTGAGCTAACAGGGCATGCA+TGG | + | chr3_4:11519011-11519030 | Msa0490150:CDS | 55.0% | |
| GTCACTGGCACTAACCACAC+AGG | - | chr3_4:11519425-11519444 | None:intergenic | 55.0% | |
| ! | TGCCGGTTATCCAACACCGA+TGG | + | chr3_4:11519711-11519730 | Msa0490150:CDS | 55.0% |
| GCCGGTTATCCAACACCGAT+GGG | + | chr3_4:11519712-11519731 | Msa0490150:CDS | 55.0% | |
| !! | CCCCATCGGTGTTGGATAAC+CGG | - | chr3_4:11519716-11519735 | None:intergenic | 55.0% |
| CCGGTTATCCAACACCGATG+GGG | + | chr3_4:11519713-11519732 | Msa0490150:CDS | 55.0% | |
| CCAAGATACCCCATCGGTGT+TGG | - | chr3_4:11519724-11519743 | None:intergenic | 55.0% | |
| ! | CCAACACCGATGGGGTATCT+TGG | + | chr3_4:11519721-11519740 | Msa0490150:CDS | 55.0% |
| CCATGGGAACGCCGAAAATC+AGG | - | chr3_4:11519775-11519794 | None:intergenic | 55.0% | |
| ! | CCTGATTTTCGGCGTTCCCA+TGG | + | chr3_4:11519772-11519791 | Msa0490150:CDS | 55.0% |
| GTGAGCTAACAGGGCATGCA+TGG | + | chr3_4:11519011-11519030 | Msa0490150:CDS | 55.0% | |
| GTCACTGGCACTAACCACAC+AGG | - | chr3_4:11519425-11519444 | None:intergenic | 55.0% | |
| ! | TGCCGGTTATCCAACACCGA+TGG | + | chr3_4:11519711-11519730 | Msa0490150:CDS | 55.0% |
| GCCGGTTATCCAACACCGAT+GGG | + | chr3_4:11519712-11519731 | Msa0490150:CDS | 55.0% | |
| !! | CCCCATCGGTGTTGGATAAC+CGG | - | chr3_4:11519716-11519735 | None:intergenic | 55.0% |
| CCGGTTATCCAACACCGATG+GGG | + | chr3_4:11519713-11519732 | Msa0490150:CDS | 55.0% | |
| CCAAGATACCCCATCGGTGT+TGG | - | chr3_4:11519724-11519743 | None:intergenic | 55.0% | |
| ! | CCAACACCGATGGGGTATCT+TGG | + | chr3_4:11519721-11519740 | Msa0490150:CDS | 55.0% |
| CCATGGGAACGCCGAAAATC+AGG | - | chr3_4:11519775-11519794 | None:intergenic | 55.0% | |
| ! | CCTGATTTTCGGCGTTCCCA+TGG | + | chr3_4:11519772-11519791 | Msa0490150:CDS | 55.0% |
| ! | GCTGCGCTGATGGGTGAGTA+TGG | + | chr3_4:11518953-11518972 | Msa0490150:CDS | 60.0% |
| GGGAACGCCGAAAATCAGGG+AGG | - | chr3_4:11519771-11519790 | None:intergenic | 60.0% | |
| ! | GCTGCGCTGATGGGTGAGTA+TGG | + | chr3_4:11518953-11518972 | Msa0490150:CDS | 60.0% |
| GGGAACGCCGAAAATCAGGG+AGG | - | chr3_4:11519771-11519790 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 11518890 | 11520307 | 11518890 | ID=Msa0490150;Name=Msa0490150 |
| chr3_4 | mRNA | 11518890 | 11520307 | 11518890 | ID=Msa0490150-mRNA-1;Parent=Msa0490150;Name=Msa0490150-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.5|0|0.66|1|1|3|0|424 |
| chr3_4 | exon | 11518890 | 11519619 | 11518890 | ID=Msa0490150-mRNA-1:exon:3560;Parent=Msa0490150-mRNA-1 |
| chr3_4 | exon | 11519692 | 11520110 | 11519692 | ID=Msa0490150-mRNA-1:exon:3561;Parent=Msa0490150-mRNA-1 |
| chr3_4 | exon | 11520182 | 11520307 | 11520182 | ID=Msa0490150-mRNA-1:exon:3562;Parent=Msa0490150-mRNA-1 |
| chr3_4 | CDS | 11518890 | 11519619 | 11518890 | ID=Msa0490150-mRNA-1:cds;Parent=Msa0490150-mRNA-1 |
| chr3_4 | CDS | 11519692 | 11520110 | 11519692 | ID=Msa0490150-mRNA-1:cds;Parent=Msa0490150-mRNA-1 |
| chr3_4 | CDS | 11520182 | 11520307 | 11520182 | ID=Msa0490150-mRNA-1:cds;Parent=Msa0490150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
