Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198910 | XP_003589014.1 | 91.304 | 322 | 27 | 1 | 1 | 322 | 1 | 321 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198910 | sp|Q9FFJ8|LIMYB_ARATH | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.05e-22 | 99.4 |
| Msa0198910 | sp|Q9FFJ8|LIMYB_ARATH | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.63e-14 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198910 | G7IB81 | 91.304 | 322 | 27 | 1 | 1 | 322 | 1 | 321 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa0198910 | 0.803460 | 3.448846e-49 | -8.615850e-47 |
| Msa0017070 | Msa0198910 | 0.805593 | 1.238495e-49 | -8.615850e-47 |
| Msa0021210 | Msa0198910 | 0.803982 | 2.687661e-49 | -8.615850e-47 |
| Msa0031520 | Msa0198910 | 0.867732 | 1.101425e-65 | -8.615850e-47 |
| Msa0036920 | Msa0198910 | 0.813324 | 2.710871e-51 | -8.615850e-47 |
| Msa0037880 | Msa0198910 | 0.807765 | 4.308188e-50 | -8.615850e-47 |
| Msa0042920 | Msa0198910 | 0.836189 | 1.082452e-56 | -8.615850e-47 |
| Msa0044260 | Msa0198910 | 0.816354 | 5.774654e-52 | -8.615850e-47 |
| Msa0044330 | Msa0198910 | 0.820427 | 6.899265e-53 | -8.615850e-47 |
| Msa0050380 | Msa0198910 | 0.809224 | 2.103602e-50 | -8.615850e-47 |
| Msa0099210 | Msa0198910 | 0.811013 | 8.655678e-51 | -8.615850e-47 |
| Msa0114430 | Msa0198910 | 0.815608 | 8.471102e-52 | -8.615850e-47 |
| Msa0120300 | Msa0198910 | 0.816002 | 6.922056e-52 | -8.615850e-47 |
| Msa0130970 | Msa0198910 | 0.814985 | 1.165434e-51 | -8.615850e-47 |
| Msa0131770 | Msa0198910 | 0.835994 | 1.213202e-56 | -8.615850e-47 |
| Msa0135660 | Msa0198910 | 0.877875 | 4.423145e-69 | -8.615850e-47 |
| Msa0142220 | Msa0198910 | 0.820594 | 6.315901e-53 | -8.615850e-47 |
| Msa0171760 | Msa0198910 | 0.801155 | 1.028681e-48 | -8.615850e-47 |
| Msa0178930 | Msa0198910 | 0.805100 | 1.571111e-49 | -8.615850e-47 |
| Msa0188460 | Msa0198910 | 0.813531 | 2.442122e-51 | -8.615850e-47 |
| Msa0198900 | Msa0198910 | 0.831103 | 2.017975e-55 | -8.615850e-47 |
| Msa0198910 | Msa0215320 | -0.808705 | 2.715919e-50 | -8.615850e-47 |
| Msa0198910 | Msa0223010 | 0.806663 | 7.372228e-50 | -8.615850e-47 |
| Msa0198910 | Msa0233080 | 0.879633 | 1.062449e-69 | -8.615850e-47 |
| Msa0198910 | Msa0236510 | -0.809855 | 1.539060e-50 | -8.615850e-47 |
| Msa0198910 | Msa0251320 | 0.832760 | 7.863824e-56 | -8.615850e-47 |
| Msa0198910 | Msa0251640 | 0.955918 | 9.973356e-114 | -8.615850e-47 |
| Msa0198910 | Msa0273100 | 0.806350 | 8.583908e-50 | -8.615850e-47 |
| Msa0198910 | Msa0278190 | 0.830149 | 3.454325e-55 | -8.615850e-47 |
| Msa0198910 | Msa0285450 | 0.803673 | 3.116139e-49 | -8.615850e-47 |
| Msa0198910 | Msa0288100 | 0.804300 | 2.308002e-49 | -8.615850e-47 |
| Msa0198910 | Msa0290870 | 0.812363 | 4.402801e-51 | -8.615850e-47 |
| Msa0198910 | Msa0305190 | 0.830486 | 2.858364e-55 | -8.615850e-47 |
| Msa0198910 | Msa0307540 | 0.819358 | 1.211516e-52 | -8.615850e-47 |
| Msa0198910 | Msa0319170 | 0.809231 | 2.095378e-50 | -8.615850e-47 |
| Msa0198910 | Msa0321310 | 0.806203 | 9.219024e-50 | -8.615850e-47 |
| Msa0198910 | Msa0339620 | 0.801854 | 7.397053e-49 | -8.615850e-47 |
| Msa0198910 | Msa0342750 | 0.811083 | 8.359825e-51 | -8.615850e-47 |
| Msa0198910 | Msa0344690 | -0.832380 | 9.771479e-56 | -8.615850e-47 |
| Msa0198910 | Msa0350320 | -0.807402 | 5.144788e-50 | -8.615850e-47 |
| Msa0198910 | Msa0355220 | 0.803661 | 3.133748e-49 | -8.615850e-47 |
| Msa0198910 | Msa0385840 | 0.814020 | 1.905044e-51 | -8.615850e-47 |
| Msa0198910 | Msa0402290 | 0.801798 | 7.596737e-49 | -8.615850e-47 |
| Msa0198910 | Msa0407750 | 0.804508 | 2.088939e-49 | -8.615850e-47 |
| Msa0198910 | Msa0413410 | 0.800818 | 1.205507e-48 | -8.615850e-47 |
| Msa0198910 | Msa0416650 | 0.815166 | 1.062342e-51 | -8.615850e-47 |
| Msa0198910 | Msa0424320 | 0.824950 | 6.113451e-54 | -8.615850e-47 |
| Msa0198910 | Msa0425790 | 0.802671 | 5.021419e-49 | -8.615850e-47 |
| Msa0198910 | Msa0433410 | -0.804346 | 2.257393e-49 | -8.615850e-47 |
| Msa0198910 | Msa0435230 | 0.805211 | 1.489536e-49 | -8.615850e-47 |
| Msa0198910 | Msa0436800 | 0.803623 | 3.191702e-49 | -8.615850e-47 |
| Msa0198910 | Msa0444750 | -0.815159 | 1.066427e-51 | -8.615850e-47 |
| Msa0198910 | Msa0466120 | 0.813735 | 2.202521e-51 | -8.615850e-47 |
| Msa0198910 | Msa0469940 | -0.824361 | 8.415605e-54 | -8.615850e-47 |
| Msa0198910 | Msa0471380 | 0.800945 | 1.135892e-48 | -8.615850e-47 |
| Msa0198910 | Msa0479340 | 0.819029 | 1.438921e-52 | -8.615850e-47 |
| Msa0198910 | Msa0490140 | 0.961104 | 2.568363e-119 | -8.615850e-47 |
| Msa0198910 | Msa0490150 | 0.837327 | 5.549381e-57 | -8.615850e-47 |
| Msa0198910 | Msa0514320 | 0.912758 | 1.349558e-83 | -8.615850e-47 |
| Msa0198910 | Msa0519640 | 0.804577 | 2.020455e-49 | -8.615850e-47 |
| Msa0198910 | Msa0523940 | 0.828958 | 6.730672e-55 | -8.615850e-47 |
| Msa0198910 | Msa0529040 | 0.806631 | 7.489343e-50 | -8.615850e-47 |
| Msa0198910 | Msa0545700 | 0.810399 | 1.175423e-50 | -8.615850e-47 |
| Msa0198910 | Msa0585230 | 0.830834 | 2.348984e-55 | -8.615850e-47 |
| Msa0198910 | Msa0598780 | 0.807113 | 5.922337e-50 | -8.615850e-47 |
| Msa0198910 | Msa0602980 | 0.880131 | 7.062975e-70 | -8.615850e-47 |
| Msa0198910 | Msa0615010 | 0.827892 | 1.216842e-54 | -8.615850e-47 |
| Msa0198910 | Msa0622170 | -0.801673 | 8.059240e-49 | -8.615850e-47 |
| Msa0198910 | Msa0623070 | 0.803140 | 4.018582e-49 | -8.615850e-47 |
| Msa0198910 | Msa0639610 | 0.800297 | 1.539857e-48 | -8.615850e-47 |
| Msa0198910 | Msa0645300 | 0.912646 | 1.534069e-83 | -8.615850e-47 |
| Msa0198910 | Msa0650630 | 0.849764 | 2.623027e-60 | -8.615850e-47 |
| Msa0198910 | Msa0659400 | 0.800381 | 1.480463e-48 | -8.615850e-47 |
| Msa0198910 | Msa0665020 | 0.807092 | 5.985612e-50 | -8.615850e-47 |
| Msa0198910 | Msa0672690 | 0.822820 | 1.930749e-53 | -8.615850e-47 |
| Msa0198910 | Msa0676080 | 0.800245 | 1.577711e-48 | -8.615850e-47 |
| Msa0198910 | Msa0688480 | 0.801025 | 1.093914e-48 | -8.615850e-47 |
| Msa0198910 | Msa0698930 | 0.813303 | 2.740152e-51 | -8.615850e-47 |
| Msa0198910 | Msa0701010 | 0.843312 | 1.514046e-58 | -8.615850e-47 |
| Msa0198910 | Msa0703780 | 0.811483 | 6.845093e-51 | -8.615850e-47 |
| Msa0198910 | Msa0729800 | 0.814811 | 1.273544e-51 | -8.615850e-47 |
| Msa0198910 | Msa0731550 | 0.804013 | 2.648536e-49 | -8.615850e-47 |
| Msa0198910 | Msa0731940 | 0.818920 | 1.524002e-52 | -8.615850e-47 |
| Msa0198910 | Msa0735660 | 0.803221 | 3.866130e-49 | -8.615850e-47 |
| Msa0198910 | Msa0745260 | -0.816220 | 6.188056e-52 | -8.615850e-47 |
| Msa0198910 | Msa0747270 | 0.803127 | 4.043675e-49 | -8.615850e-47 |
| Msa0198910 | Msa0748970 | 0.802352 | 5.843823e-49 | -8.615850e-47 |
| Msa0198910 | Msa0753720 | 0.812357 | 4.416291e-51 | -8.615850e-47 |
| Msa0198910 | Msa0755180 | 0.833363 | 5.569005e-56 | -8.615850e-47 |
| Msa0198910 | Msa0760130 | 0.804285 | 2.324701e-49 | -8.615850e-47 |
| Msa0198910 | Msa0766630 | 0.847652 | 1.010161e-59 | -8.615850e-47 |
| Msa0198910 | Msa0767720 | 0.834003 | 3.851959e-56 | -8.615850e-47 |
| Msa0198910 | Msa0767760 | 0.802711 | 4.929029e-49 | -8.615850e-47 |
| Msa0198910 | Msa0768290 | 0.832449 | 9.395492e-56 | -8.615850e-47 |
| Msa0198910 | Msa0768310 | 0.830689 | 2.549505e-55 | -8.615850e-47 |
| Msa0198910 | Msa0768370 | 0.845153 | 4.850510e-59 | -8.615850e-47 |
| Msa0198910 | Msa0773180 | 0.821308 | 4.327010e-53 | -8.615850e-47 |
| Msa0198910 | Msa0800210 | 0.807008 | 6.235059e-50 | -8.615850e-47 |
| Msa0198910 | Msa0804800 | 0.802280 | 6.046328e-49 | -8.615850e-47 |
| Msa0198910 | Msa0804810 | 0.811628 | 6.365528e-51 | -8.615850e-47 |
| Msa0198910 | Msa0810220 | 0.814578 | 1.434337e-51 | -8.615850e-47 |
| Msa0198910 | Msa0817460 | 0.803652 | 3.146809e-49 | -8.615850e-47 |
| Msa0198910 | Msa0820730 | 0.820974 | 5.164322e-53 | -8.615850e-47 |
| Msa0198910 | Msa0820850 | 0.826552 | 2.547606e-54 | -8.615850e-47 |
| Msa0198910 | Msa0824590 | 0.809944 | 1.472626e-50 | -8.615850e-47 |
| Msa0198910 | Msa0831850 | 0.803139 | 4.019861e-49 | -8.615850e-47 |
| Msa0198910 | Msa0844490 | 0.842479 | 2.521132e-58 | -8.615850e-47 |
| Msa0198910 | Msa0849030 | 0.807050 | 6.108948e-50 | -8.615850e-47 |
| Msa0198910 | Msa0861130 | 0.825085 | 5.681505e-54 | -8.615850e-47 |
| Msa0198910 | Msa0864070 | 0.802695 | 4.964632e-49 | -8.615850e-47 |
| Msa0198910 | Msa0877250 | 0.857374 | 1.704449e-62 | -8.615850e-47 |
| Msa0198910 | Msa0897330 | 0.827017 | 1.973585e-54 | -8.615850e-47 |
| Msa0198910 | Msa0899430 | 0.834057 | 3.735597e-56 | -8.615850e-47 |
| Msa0198910 | Msa0899450 | 0.832872 | 7.375526e-56 | -8.615850e-47 |
| Msa0198910 | Msa0901070 | 0.807116 | 5.915569e-50 | -8.615850e-47 |
| Msa0198910 | Msa0907260 | 0.802879 | 4.548682e-49 | -8.615850e-47 |
| Msa0198910 | Msa0914270 | 0.835941 | 1.251802e-56 | -8.615850e-47 |
| Msa0198910 | Msa0914760 | 0.801287 | 9.670230e-49 | -8.615850e-47 |
| Msa0198910 | Msa0927380 | 0.837746 | 4.332227e-57 | -8.615850e-47 |
| Msa0198910 | Msa0931520 | 0.820775 | 5.739461e-53 | -8.615850e-47 |
| Msa0198910 | Msa0933100 | 0.813067 | 3.087548e-51 | -8.615850e-47 |
| Msa0198910 | Msa0935540 | 0.800478 | 1.414303e-48 | -8.615850e-47 |
| Msa0198910 | Msa0935910 | 0.807036 | 6.149157e-50 | -8.615850e-47 |
| Msa0198910 | Msa0936300 | 0.823912 | 1.072487e-53 | -8.615850e-47 |
| Msa0198910 | Msa0947660 | 0.800151 | 1.648872e-48 | -8.615850e-47 |
| Msa0198910 | Msa0948320 | 0.903889 | 2.174641e-79 | -8.615850e-47 |
| Msa0198910 | Msa0952720 | 0.800862 | 1.181191e-48 | -8.615850e-47 |
| Msa0198910 | Msa0953120 | 0.806858 | 6.705923e-50 | -8.615850e-47 |
| Msa0198910 | Msa0956270 | 0.816719 | 4.783720e-52 | -8.615850e-47 |
| Msa0198910 | Msa0958550 | 0.828979 | 6.652677e-55 | -8.615850e-47 |
| Msa0198910 | Msa0964900 | 0.818065 | 2.380343e-52 | -8.615850e-47 |
| Msa0198910 | Msa0966750 | 0.812590 | 3.926566e-51 | -8.615850e-47 |
| Msa0198910 | Msa0967180 | 0.806218 | 9.154712e-50 | -8.615850e-47 |
| Msa0198910 | Msa0967280 | 0.808928 | 2.433862e-50 | -8.615850e-47 |
| Msa0198910 | Msa0969520 | 0.829249 | 5.719964e-55 | -8.615850e-47 |
| Msa0198910 | Msa0973100 | 0.832146 | 1.116509e-55 | -8.615850e-47 |
| Msa0198910 | Msa0974070 | 0.814708 | 1.342421e-51 | -8.615850e-47 |
| Msa0198910 | Msa0974080 | 0.848765 | 4.974720e-60 | -8.615850e-47 |
| Msa0198910 | Msa0976670 | 0.828983 | 6.636968e-55 | -8.615850e-47 |
| Msa0198910 | Msa1000860 | 0.809152 | 2.179481e-50 | -8.615850e-47 |
| Msa0198910 | Msa1000880 | 0.809367 | 1.959917e-50 | -8.615850e-47 |
| Msa0198910 | Msa1000890 | 0.842755 | 2.130224e-58 | -8.615850e-47 |
| Msa0198910 | Msa1000900 | 0.848315 | 6.630501e-60 | -8.615850e-47 |
| Msa0198910 | Msa1001390 | 0.802038 | 6.782419e-49 | -8.615850e-47 |
| Msa0198910 | Msa1014540 | 0.822529 | 2.256285e-53 | -8.615850e-47 |
| Msa0198910 | Msa1023050 | 0.801389 | 9.213628e-49 | -8.615850e-47 |
| Msa0198910 | Msa1023950 | 0.820927 | 5.296747e-53 | -8.615850e-47 |
| Msa0198910 | Msa1054990 | 0.806559 | 7.757286e-50 | -8.615850e-47 |
| Msa0198910 | Msa1059570 | 0.804100 | 2.540506e-49 | -8.615850e-47 |
| Msa0198910 | Msa1060840 | 0.820680 | 6.033935e-53 | -8.615850e-47 |
| Msa0198910 | Msa1065570 | 0.805577 | 1.248097e-49 | -8.615850e-47 |
| Msa0198910 | Msa1075220 | -0.824173 | 9.318749e-54 | -8.615850e-47 |
| Msa0198910 | Msa1075540 | 0.812277 | 4.596228e-51 | -8.615850e-47 |
| Msa0198910 | Msa1075650 | 0.806102 | 9.679742e-50 | -8.615850e-47 |
| Msa0198910 | Msa1076700 | 0.802144 | 6.447761e-49 | -8.615850e-47 |
| Msa0198910 | Msa1082580 | 0.809906 | 1.501177e-50 | -8.615850e-47 |
| Msa0198910 | Msa1098250 | 0.811764 | 5.946234e-51 | -8.615850e-47 |
| Msa0198910 | Msa1099970 | 0.817594 | 3.041434e-52 | -8.615850e-47 |
| Msa0198910 | Msa1111870 | 0.816664 | 4.922456e-52 | -8.615850e-47 |
| Msa0198910 | Msa1113170 | 0.820305 | 7.358173e-53 | -8.615850e-47 |
| Msa0198910 | Msa1114030 | 0.815828 | 7.569796e-52 | -8.615850e-47 |
| Msa0198910 | Msa1115870 | 0.814525 | 1.473711e-51 | -8.615850e-47 |
| Msa0198910 | Msa1116260 | 0.807788 | 4.259212e-50 | -8.615850e-47 |
| Msa0198910 | Msa1117150 | 0.806954 | 6.400328e-50 | -8.615850e-47 |
| Msa0198910 | Msa1121480 | 0.834939 | 2.241971e-56 | -8.615850e-47 |
| Msa0198910 | Msa1121490 | 0.836187 | 1.083813e-56 | -8.615850e-47 |
| Msa0198910 | Msa1137570 | 0.837964 | 3.810156e-57 | -8.615850e-47 |
| Msa0198910 | Msa1139000 | -0.806134 | 9.533562e-50 | -8.615850e-47 |
| Msa0198910 | Msa1144720 | -0.822874 | 1.875525e-53 | -8.615850e-47 |
| Msa0198910 | Msa1156020 | 0.802967 | 4.364108e-49 | -8.615850e-47 |
| Msa0198910 | Msa1162550 | -0.830622 | 2.647052e-55 | -8.615850e-47 |
| Msa0198910 | Msa1174040 | 0.818756 | 1.660008e-52 | -8.615850e-47 |
| Msa0198910 | Msa1184420 | 0.809155 | 2.176210e-50 | -8.615850e-47 |
| Msa0198910 | Msa1185110 | 0.803618 | 3.198559e-49 | -8.615850e-47 |
| Msa0198910 | Msa1195180 | 0.800227 | 1.591095e-48 | -8.615850e-47 |
| Msa0198910 | Msa1195190 | 0.809068 | 2.271883e-50 | -8.615850e-47 |
| Msa0198910 | Msa1246510 | 0.812918 | 3.329534e-51 | -8.615850e-47 |
| Msa0198910 | Msa1248310 | 0.822855 | 1.894810e-53 | -8.615850e-47 |
| Msa0198910 | Msa1248370 | 0.831813 | 1.349450e-55 | -8.615850e-47 |
| Msa0198910 | Msa1249280 | 0.809450 | 1.881337e-50 | -8.615850e-47 |
| Msa0198910 | Msa1253000 | 0.803612 | 3.207657e-49 | -8.615850e-47 |
| Msa0198910 | Msa1276890 | 0.816642 | 4.979000e-52 | -8.615850e-47 |
| Msa0198910 | Msa1277660 | 0.810176 | 1.312748e-50 | -8.615850e-47 |
| Msa0198910 | Msa1278110 | 0.816053 | 6.743029e-52 | -8.615850e-47 |
| Msa0198910 | Msa1282580 | -0.802649 | 5.075857e-49 | -8.615850e-47 |
| Msa0198910 | Msa1284680 | 0.852962 | 3.271273e-61 | -8.615850e-47 |
| Msa0198910 | Msa1286800 | 0.816825 | 4.528859e-52 | -8.615850e-47 |
| Msa0198910 | Msa1288560 | 0.801005 | 1.104387e-48 | -8.615850e-47 |
| Msa0198910 | Msa1304890 | -0.802590 | 5.219574e-49 | -8.615850e-47 |
| Msa0198910 | Msa1307890 | 0.807336 | 5.311439e-50 | -8.615850e-47 |
| Msa0198910 | Msa1313320 | 0.807128 | 5.880563e-50 | -8.615850e-47 |
| Msa0198910 | Msa1348760 | 0.805449 | 1.328116e-49 | -8.615850e-47 |
| Msa0198910 | Msa1353470 | 0.817417 | 3.332847e-52 | -8.615850e-47 |
| Msa0198910 | Msa1359040 | 0.801200 | 1.007520e-48 | -8.615850e-47 |
| Msa0198910 | Msa1366810 | 0.849685 | 2.759167e-60 | -8.615850e-47 |
| Msa0198910 | Msa1366970 | 0.805340 | 1.399408e-49 | -8.615850e-47 |
| Msa0198910 | Msa1373030 | 0.811549 | 6.623726e-51 | -8.615850e-47 |
| Msa0198910 | Msa1378940 | 0.815977 | 7.011413e-52 | -8.615850e-47 |
| Msa0198910 | Msa1384280 | 0.803475 | 3.425748e-49 | -8.615850e-47 |
| Msa0198910 | Msa1388510 | 0.810707 | 1.008379e-50 | -8.615850e-47 |
| Msa0198910 | Msa1394310 | 0.828232 | 1.008161e-54 | -8.615850e-47 |
| Msa0198910 | Msa1400720 | 0.807814 | 4.204830e-50 | -8.615850e-47 |
| Msa0198910 | Msa1403480 | 0.805361 | 1.385439e-49 | -8.615850e-47 |
| Msa0198910 | Msa1411020 | 0.808275 | 3.355327e-50 | -8.615850e-47 |
| Msa0198910 | Msa1420820 | 0.825668 | 4.133575e-54 | -8.615850e-47 |
| Msa0198910 | Msa1424290 | 0.802042 | 6.767488e-49 | -8.615850e-47 |
| Msa0198910 | Msa1427230 | 0.822594 | 2.178955e-53 | -8.615850e-47 |
| Msa0198910 | Msa1434350 | 0.801430 | 9.036648e-49 | -8.615850e-47 |
| Msa0198910 | Msa1439320 | 0.805223 | 1.480519e-49 | -8.615850e-47 |
| Msa0198910 | Msa1440810 | 0.805585 | 1.243141e-49 | -8.615850e-47 |
| Msa0198910 | Msa1443060 | 0.804243 | 2.371553e-49 | -8.615850e-47 |
| Msa0198910 | Msa1444440 | 0.800482 | 1.411484e-48 | -8.615850e-47 |
| Msa0198910 | Msa1451620 | -0.842490 | 2.504330e-58 | -8.615850e-47 |
| Msa0198910 | Msa1453560 | 0.802531 | 5.369011e-49 | -8.615850e-47 |
| Msa0198910 | Msa1455710 | 0.812037 | 5.184633e-51 | -8.615850e-47 |
| Msa0198910 | Msa1455720 | 0.820848 | 5.522491e-53 | -8.615850e-47 |
| Msa0198910 | Msa1460830 | 0.815684 | 8.150942e-52 | -8.615850e-47 |
| Msa0198910 | Msa1466540 | 0.806904 | 6.558558e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198910 | MtrunA17_Chr2g0285481 | 62.654 | 324 | 115 | 4 | 2 | 321 | 1 | 322 | 1.09e-142 | 405 |
| Msa0198910 | MtrunA17_Chr1g0172741 | 62.037 | 324 | 117 | 4 | 2 | 321 | 1 | 322 | 2.76e-141 | 402 |
| Msa0198910 | MtrunA17_Chr8g0334551 | 56.707 | 328 | 135 | 2 | 1 | 321 | 1 | 328 | 2.23e-129 | 372 |
| Msa0198910 | MtrunA17_Chr2g0321391 | 67.213 | 244 | 77 | 2 | 79 | 321 | 3 | 244 | 2.05e-116 | 336 |
| Msa0198910 | MtrunA17_Chr5g0422701 | 65.174 | 201 | 67 | 2 | 122 | 321 | 14 | 212 | 2.21e-87 | 261 |
| Msa0198910 | MtrunA17_Chr2g0295811 | 41.629 | 221 | 111 | 6 | 119 | 321 | 10 | 230 | 1.15e-44 | 152 |
| Msa0198910 | MtrunA17_Chr5g0422691 | 61.957 | 92 | 34 | 1 | 13 | 103 | 14 | 105 | 1.32e-34 | 122 |
| Msa0198910 | MtrunA17_Chr2g0295611 | 62.500 | 96 | 35 | 1 | 100 | 194 | 1 | 96 | 3.45e-33 | 118 |
| Msa0198910 | MtrunA17_Chr5g0402821 | 28.481 | 316 | 196 | 9 | 22 | 315 | 16 | 323 | 8.20e-27 | 107 |
| Msa0198910 | MtrunA17_Chr8g0362511 | 29.450 | 309 | 183 | 10 | 21 | 310 | 67 | 359 | 1.05e-26 | 108 |
| Msa0198910 | MtrunA17_Chr3g0113081 | 37.500 | 152 | 86 | 2 | 22 | 173 | 185 | 327 | 1.45e-24 | 104 |
| Msa0198910 | MtrunA17_Chr3g0113081 | 29.126 | 309 | 157 | 8 | 12 | 311 | 373 | 628 | 2.24e-24 | 103 |
| Msa0198910 | MtrunA17_Chr3g0113081 | 35.821 | 134 | 79 | 2 | 11 | 144 | 3 | 129 | 1.76e-17 | 83.2 |
| Msa0198910 | MtrunA17_Chr5g0405761 | 29.000 | 300 | 181 | 8 | 19 | 312 | 47 | 320 | 2.25e-24 | 101 |
| Msa0198910 | MtrunA17_Chr6g0469501 | 63.793 | 58 | 21 | 0 | 264 | 321 | 1 | 58 | 1.12e-21 | 86.7 |
| Msa0198910 | MtrunA17_Chr1g0176881 | 29.412 | 136 | 95 | 1 | 21 | 156 | 21 | 155 | 2.80e-15 | 76.6 |
| Msa0198910 | MtrunA17_Chr1g0176881 | 28.966 | 145 | 100 | 2 | 2 | 146 | 175 | 316 | 1.60e-14 | 74.3 |
| Msa0198910 | MtrunA17_Chr8g0360271 | 25.000 | 292 | 183 | 11 | 34 | 310 | 22 | 292 | 1.58e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198910 | AT5G05800.1 | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.14e-23 | 99.4 |
| Msa0198910 | AT5G05800.1 | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.65e-15 | 77.4 |
| Msa0198910 | AT5G05800.5 | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.14e-23 | 99.4 |
| Msa0198910 | AT5G05800.5 | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.65e-15 | 77.4 |
| Msa0198910 | AT5G05800.3 | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.14e-23 | 99.4 |
| Msa0198910 | AT5G05800.3 | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.65e-15 | 77.4 |
| Msa0198910 | AT5G05800.2 | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.14e-23 | 99.4 |
| Msa0198910 | AT5G05800.2 | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.65e-15 | 77.4 |
| Msa0198910 | AT5G05800.4 | 24.921 | 317 | 213 | 6 | 6 | 322 | 156 | 447 | 5.14e-23 | 99.4 |
| Msa0198910 | AT5G05800.4 | 35.135 | 111 | 71 | 1 | 20 | 130 | 2 | 111 | 1.65e-15 | 77.4 |
| Msa0198910 | AT3G11290.2 | 25.243 | 309 | 190 | 8 | 20 | 310 | 163 | 448 | 8.62e-18 | 84.3 |
| Msa0198910 | AT3G11290.1 | 25.243 | 309 | 190 | 8 | 20 | 310 | 163 | 448 | 8.62e-18 | 84.3 |
| Msa0198910 | AT2G24960.1 | 28.467 | 137 | 97 | 1 | 8 | 144 | 155 | 290 | 1.64e-14 | 74.7 |
| Msa0198910 | AT2G24960.2 | 28.467 | 137 | 97 | 1 | 8 | 144 | 155 | 290 | 1.88e-14 | 74.7 |
| Msa0198910 | AT2G24960.2 | 27.273 | 143 | 103 | 1 | 12 | 154 | 314 | 455 | 4.23e-12 | 67.4 |
| Msa0198910 | AT3G11310.1 | 32.867 | 143 | 90 | 2 | 20 | 157 | 171 | 312 | 4.46e-12 | 67.0 |
| Msa0198910 | AT2G19220.1 | 26.019 | 319 | 198 | 12 | 9 | 317 | 149 | 439 | 4.03e-11 | 63.9 |
Find 75 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCATGGTATAACTTATT+TGG | 0.134716 | 2_1:-17659889 | Msa0198910:CDS |
| ACAACTGAATTTGGAAATAT+TGG | 0.148866 | 2_1:-17659486 | Msa0198910:CDS |
| GTTGGAGCAACAACTGAATT+TGG | 0.213211 | 2_1:-17659495 | Msa0198910:CDS |
| GGCAGAAAACAAAAGCTAAT+TGG | 0.275009 | 2_1:-17660098 | Msa0198910:CDS |
| AACTTATTTGGGAGAGAAAC+TGG | 0.287945 | 2_1:-17659877 | Msa0198910:CDS |
| TTGGGAGAGAAACTGGATTA+GGG | 0.298488 | 2_1:-17659870 | Msa0198910:CDS |
| TTTGGGAGAGAAACTGGATT+AGG | 0.315464 | 2_1:-17659871 | Msa0198910:CDS |
| GAAATAAACATCTCCCTTGC+AGG | 0.323302 | 2_1:+17659195 | None:intergenic |
| GTCCGGTTAAATTATGAAAT+CGG | 0.352053 | 2_1:+17659968 | None:intergenic |
| TGTATTACATACCAGTTGTT+TGG | 0.352266 | 2_1:+17659798 | None:intergenic |
| CAACTGAATTTGGAAATATT+GGG | 0.356640 | 2_1:-17659485 | Msa0198910:CDS |
| GAGCATGGTATAACTTATTT+GGG | 0.363157 | 2_1:-17659888 | Msa0198910:CDS |
| TTCAAGGATGTAGTGGCTAA+TGG | 0.366838 | 2_1:-17659636 | Msa0198910:CDS |
| CAGAGGAGAAGAGGTTGAAT+TGG | 0.373243 | 2_1:-17659161 | Msa0198910:CDS |
| GTCCGATTTCATAATTTAAC+CGG | 0.374307 | 2_1:-17659970 | Msa0198910:CDS |
| TTGGTCTCCCACCACTCATC+AGG | 0.410369 | 2_1:+17659817 | None:intergenic |
| GCAGAAAACAAAAGCTAATT+GGG | 0.414370 | 2_1:-17660097 | Msa0198910:CDS |
| GTTCCTCCTCACCTAGTGAT+GGG | 0.415978 | 2_1:-17660122 | Msa0198910:CDS |
| GAAAAGTGTGGTTAACTCAT+TGG | 0.420206 | 2_1:+17659656 | None:intergenic |
| AAAAGGGTGGACAAATATTA+GGG | 0.422862 | 2_1:-17659992 | Msa0198910:CDS |
| AAACGTTGTGAAAGCATGTT+TGG | 0.426283 | 2_1:-17660058 | Msa0198910:CDS |
| ATGATCTTTATTTGCATGCT+CGG | 0.426517 | 2_1:-17659242 | Msa0198910:CDS |
| GGTTCCTCCTCACCTAGTGA+TGG | 0.438340 | 2_1:-17660123 | Msa0198910:CDS |
| TTCCTCCTCACCTAGTGATG+GGG | 0.476214 | 2_1:-17660121 | Msa0198910:CDS |
| AGAAGGCTCAACTAAAGAAT+AGG | 0.479515 | 2_1:-17659936 | Msa0198910:CDS |
| TCCTCCTCACCTAGTGATGG+GGG | 0.484199 | 2_1:-17660120 | Msa0198910:CDS |
| GCTGCGGGTAATGCATCTAT+TGG | 0.495551 | 2_1:-17659306 | Msa0198910:CDS |
| GATGAGGCAGTGGCTGTAGA+AGG | 0.502147 | 2_1:-17659543 | Msa0198910:CDS |
| AGCCTTCTCATACTTCAGTC+CGG | 0.504703 | 2_1:+17659951 | None:intergenic |
| CGTACCAACACGTTCTCCCT+TGG | 0.505137 | 2_1:+17660026 | None:intergenic |
| TGCTGATGTTTAAGCCTGCA+AGG | 0.517021 | 2_1:-17659209 | Msa0198910:CDS |
| GCAGTGGCTGTAGAAGGATC+TGG | 0.527670 | 2_1:-17659537 | Msa0198910:CDS |
| TGGCTAATGGAGAATACACT+TGG | 0.530743 | 2_1:-17659623 | Msa0198910:CDS |
| ATGACAGTCTGAGAAAGGAT+TGG | 0.531322 | 2_1:-17659912 | Msa0198910:CDS |
| CTTCTCCTCTGAACCTCGTA+GGG | 0.535159 | 2_1:+17659173 | None:intergenic |
| GTGGTGGGAGACCAAACAAC+TGG | 0.536532 | 2_1:-17659809 | Msa0198910:intron |
| TAGGTATGACAGTCTGAGAA+AGG | 0.543958 | 2_1:-17659917 | Msa0198910:CDS |
| AGGTTAGTCATGAATGGCAG+TGG | 0.548613 | 2_1:+17659117 | None:intergenic |
| TCACACAGGTTAGTCATGAA+TGG | 0.548759 | 2_1:+17659111 | None:intergenic |
| TATTTCCCTACGAGGTTCAG+AGG | 0.555424 | 2_1:-17659178 | Msa0198910:CDS |
| GGAGAGAAACTGGATTAGGG+TGG | 0.557144 | 2_1:-17659867 | Msa0198910:CDS |
| ATCATTTGAGACTTCATCCA+TGG | 0.558263 | 2_1:+17659260 | None:intergenic |
| CATGACTAACCTGTGTGACT+AGG | 0.563491 | 2_1:-17659106 | None:intergenic |
| TACGAGGTTCAGAGGAGAAG+AGG | 0.567800 | 2_1:-17659170 | Msa0198910:CDS |
| CGTTCTCGCAATGATGCTGC+GGG | 0.569360 | 2_1:-17659321 | Msa0198910:CDS |
| TACACTTGGGCACCATCATG+TGG | 0.569479 | 2_1:-17659609 | Msa0198910:CDS |
| ATGTTTGGAGCAAGTCTCCA+AGG | 0.570714 | 2_1:-17660043 | Msa0198910:CDS |
| GTCAAAAGAGTGGTGAGAAG+AGG | 0.571883 | 2_1:-17659437 | Msa0198910:CDS |
| TCGTTCTCGCAATGATGCTG+CGG | 0.583184 | 2_1:-17659322 | Msa0198910:CDS |
| TGCATCTATTGGTGAAGTGA+TGG | 0.591393 | 2_1:-17659295 | Msa0198910:CDS |
| GCTGATGTTTAAGCCTGCAA+GGG | 0.594722 | 2_1:-17659208 | Msa0198910:CDS |
| TCTTCTCCTCTGAACCTCGT+AGG | 0.595412 | 2_1:+17659172 | None:intergenic |
| ACACTTGGGCACCATCATGT+GGG | 0.596990 | 2_1:-17659608 | Msa0198910:CDS |
| GATAGCGAGGATGCAAGTGT+TGG | 0.599986 | 2_1:-17659513 | Msa0198910:CDS |
| GATGGCAATACCCCACATGA+TGG | 0.601622 | 2_1:+17659597 | None:intergenic |
| CCTCCTCACCTAGTGATGGG+GGG | 0.608278 | 2_1:-17660119 | Msa0198910:CDS |
| TGAGAAAGGATTGGAGAGCA+TGG | 0.612846 | 2_1:-17659903 | Msa0198910:CDS |
| GCTACAACAGTGTTGTTCAC+AGG | 0.614063 | 2_1:+17659841 | None:intergenic |
| GTGGTTAACTCATTGGCGAA+TGG | 0.617203 | 2_1:+17659663 | None:intergenic |
| AGAAGGATCTGGCGATAGCG+AGG | 0.624952 | 2_1:-17659526 | Msa0198910:CDS |
| CACTTGGGCACCATCATGTG+GGG | 0.626082 | 2_1:-17659607 | Msa0198910:CDS |
| AACCGGACTGAAGTATGAGA+AGG | 0.626830 | 2_1:-17659953 | Msa0198910:CDS |
| CACTACATCCTTGAAAAGTG+TGG | 0.627204 | 2_1:+17659644 | None:intergenic |
| TTGTAGCACCTGATGAGTGG+TGG | 0.632872 | 2_1:-17659825 | Msa0198910:CDS |
| GGTTAGTCATGAATGGCAGT+GGG | 0.638001 | 2_1:+17659118 | None:intergenic |
| CCCATACATCCTAGTCACAC+AGG | 0.638813 | 2_1:+17659097 | None:intergenic |
| GAGAGAAACTGGATTAGGGT+GGG | 0.643865 | 2_1:-17659866 | Msa0198910:CDS |
| GTCTCCAAGGGAGAACGTGT+TGG | 0.644338 | 2_1:-17660030 | Msa0198910:CDS |
| TGTTTGGAGCAAGTCTCCAA+GGG | 0.647436 | 2_1:-17660042 | Msa0198910:CDS |
| AAAACTGGTGGTCAAAAGAG+TGG | 0.650196 | 2_1:-17659447 | Msa0198910:CDS |
| TGTAGCACCTGATGAGTGGT+GGG | 0.651018 | 2_1:-17659824 | Msa0198910:CDS |
| GATGGCTGAGCTTCACACCA+TGG | 0.663371 | 2_1:-17659277 | Msa0198910:CDS |
| GGCTAATGGAGAATACACTT+GGG | 0.677364 | 2_1:-17659622 | Msa0198910:CDS |
| CTGTTGTAGCACCTGATGAG+TGG | 0.705267 | 2_1:-17659828 | Msa0198910:CDS |
| GAGATGTTTATTTCCCTACG+AGG | 0.736446 | 2_1:-17659186 | Msa0198910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCCTAAATTTTTCATAAAGA+GGG | + | chr2_1:17659563-17659582 | None:intergenic | 20.0% |
| !!! | TTCCTAAATTTTTCATAAAG+AGG | + | chr2_1:17659564-17659583 | None:intergenic | 20.0% |
| !! | TTATGAAAAATTTAGGAACA+AGG | - | chr2_1:17659566-17659585 | Msa0198910:CDS | 20.0% |
| !! | TATGAAAAATTTAGGAACAA+GGG | - | chr2_1:17659567-17659586 | Msa0198910:CDS | 20.0% |
| !!! | TCCTAAATTTTTCATAAAGA+GGG | + | chr2_1:17659563-17659582 | None:intergenic | 20.0% |
| !!! | TTCCTAAATTTTTCATAAAG+AGG | + | chr2_1:17659564-17659583 | None:intergenic | 20.0% |
| !! | TTATGAAAAATTTAGGAACA+AGG | - | chr2_1:17659566-17659585 | Msa0198910:CDS | 20.0% |
| !! | TATGAAAAATTTAGGAACAA+GGG | - | chr2_1:17659567-17659586 | Msa0198910:CDS | 20.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | - | chr2_1:17659113-17659132 | Msa0198910:CDS | 25.0% |
| ! | ACCCTCTTTATGAAAAATTT+AGG | - | chr2_1:17659559-17659578 | Msa0198910:CDS | 25.0% |
| ! | ATGAAAAATTTAGGAACAAG+GGG | - | chr2_1:17659568-17659587 | Msa0198910:CDS | 25.0% |
| ! | ACAACTGAATTTGGAAATAT+TGG | - | chr2_1:17659771-17659790 | Msa0198910:intron | 25.0% |
| ! | CAACTGAATTTGGAAATATT+GGG | - | chr2_1:17659772-17659791 | Msa0198910:intron | 25.0% |
| ! | TTGAATTCTTCACAAAAAAC+TGG | - | chr2_1:17659795-17659814 | Msa0198910:intron | 25.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | - | chr2_1:17659113-17659132 | Msa0198910:CDS | 25.0% |
| ! | ACCCTCTTTATGAAAAATTT+AGG | - | chr2_1:17659559-17659578 | Msa0198910:CDS | 25.0% |
| ! | ATGAAAAATTTAGGAACAAG+GGG | - | chr2_1:17659568-17659587 | Msa0198910:CDS | 25.0% |
| ! | ACAACTGAATTTGGAAATAT+TGG | - | chr2_1:17659771-17659790 | Msa0198910:intron | 25.0% |
| ! | CAACTGAATTTGGAAATATT+GGG | - | chr2_1:17659772-17659791 | Msa0198910:intron | 25.0% |
| ! | TTGAATTCTTCACAAAAAAC+TGG | - | chr2_1:17659795-17659814 | Msa0198910:intron | 25.0% |
| GAATACCAAGAAAAATGTTG+TGG | - | chr2_1:17659112-17659131 | Msa0198910:CDS | 30.0% | |
| GCAGAAAACAAAAGCTAATT+GGG | - | chr2_1:17659160-17659179 | Msa0198910:CDS | 30.0% | |
| ! | GTACGAGCTTTTCAAAAAAA+GGG | - | chr2_1:17659249-17659268 | Msa0198910:CDS | 30.0% |
| AAAAAGGGTGGACAAATATT+AGG | - | chr2_1:17659264-17659283 | Msa0198910:CDS | 30.0% | |
| AAAAGGGTGGACAAATATTA+GGG | - | chr2_1:17659265-17659284 | Msa0198910:CDS | 30.0% | |
| GTCCGATTTCATAATTTAAC+CGG | - | chr2_1:17659287-17659306 | Msa0198910:CDS | 30.0% | |
| GTCCGGTTAAATTATGAAAT+CGG | + | chr2_1:17659292-17659311 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | - | chr2_1:17659368-17659387 | Msa0198910:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | - | chr2_1:17659369-17659388 | Msa0198910:CDS | 30.0% | |
| TGTATTACATACCAGTTGTT+TGG | + | chr2_1:17659462-17659481 | None:intergenic | 30.0% | |
| AACACGAGTATACATATCTA+AGG | + | chr2_1:17659505-17659524 | None:intergenic | 30.0% | |
| ! | TCATCATTTTCAAACACAGA+TGG | + | chr2_1:17659681-17659700 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | - | chr2_1:17659698-17659717 | Msa0198910:CDS | 30.0% |
| AATTCTTCACAAAAAACTGG+TGG | - | chr2_1:17659798-17659817 | Msa0198910:intron | 30.0% | |
| ! | ATGATCTTTATTTGCATGCT+CGG | - | chr2_1:17660015-17660034 | Msa0198910:CDS | 30.0% |
| GAATACCAAGAAAAATGTTG+TGG | - | chr2_1:17659112-17659131 | Msa0198910:CDS | 30.0% | |
| GCAGAAAACAAAAGCTAATT+GGG | - | chr2_1:17659160-17659179 | Msa0198910:CDS | 30.0% | |
| ! | GTACGAGCTTTTCAAAAAAA+GGG | - | chr2_1:17659249-17659268 | Msa0198910:CDS | 30.0% |
| AAAAAGGGTGGACAAATATT+AGG | - | chr2_1:17659264-17659283 | Msa0198910:CDS | 30.0% | |
| AAAAGGGTGGACAAATATTA+GGG | - | chr2_1:17659265-17659284 | Msa0198910:CDS | 30.0% | |
| GTCCGATTTCATAATTTAAC+CGG | - | chr2_1:17659287-17659306 | Msa0198910:CDS | 30.0% | |
| GTCCGGTTAAATTATGAAAT+CGG | + | chr2_1:17659292-17659311 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | - | chr2_1:17659368-17659387 | Msa0198910:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | - | chr2_1:17659369-17659388 | Msa0198910:CDS | 30.0% | |
| TGTATTACATACCAGTTGTT+TGG | + | chr2_1:17659462-17659481 | None:intergenic | 30.0% | |
| AACACGAGTATACATATCTA+AGG | + | chr2_1:17659505-17659524 | None:intergenic | 30.0% | |
| ! | TCATCATTTTCAAACACAGA+TGG | + | chr2_1:17659681-17659700 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | - | chr2_1:17659698-17659717 | Msa0198910:CDS | 30.0% |
| AATTCTTCACAAAAAACTGG+TGG | - | chr2_1:17659798-17659817 | Msa0198910:intron | 30.0% | |
| ! | ATGATCTTTATTTGCATGCT+CGG | - | chr2_1:17660015-17660034 | Msa0198910:CDS | 30.0% |
| GGCAGAAAACAAAAGCTAAT+TGG | - | chr2_1:17659159-17659178 | Msa0198910:CDS | 35.0% | |
| ! | AAACGTTGTGAAAGCATGTT+TGG | - | chr2_1:17659199-17659218 | Msa0198910:CDS | 35.0% |
| ! | GGTACGAGCTTTTCAAAAAA+AGG | - | chr2_1:17659248-17659267 | Msa0198910:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | - | chr2_1:17659321-17659340 | Msa0198910:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | - | chr2_1:17659380-17659399 | Msa0198910:CDS | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | - | chr2_1:17659533-17659552 | Msa0198910:CDS | 35.0% | |
| ! | GAAAAGTGTGGTTAACTCAT+TGG | + | chr2_1:17659604-17659623 | None:intergenic | 35.0% |
| ! | TGAGTTAACCACACTTTTCA+AGG | - | chr2_1:17659605-17659624 | Msa0198910:CDS | 35.0% |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | + | chr2_1:17659870-17659889 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | + | chr2_1:17660000-17660019 | None:intergenic | 35.0% |
| GGCAGAAAACAAAAGCTAAT+TGG | - | chr2_1:17659159-17659178 | Msa0198910:CDS | 35.0% | |
| ! | AAACGTTGTGAAAGCATGTT+TGG | - | chr2_1:17659199-17659218 | Msa0198910:CDS | 35.0% |
| ! | GGTACGAGCTTTTCAAAAAA+AGG | - | chr2_1:17659248-17659267 | Msa0198910:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | - | chr2_1:17659321-17659340 | Msa0198910:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | - | chr2_1:17659380-17659399 | Msa0198910:CDS | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | - | chr2_1:17659533-17659552 | Msa0198910:CDS | 35.0% | |
| ! | GAAAAGTGTGGTTAACTCAT+TGG | + | chr2_1:17659604-17659623 | None:intergenic | 35.0% |
| ! | TGAGTTAACCACACTTTTCA+AGG | - | chr2_1:17659605-17659624 | Msa0198910:CDS | 35.0% |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | + | chr2_1:17659870-17659889 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | + | chr2_1:17660000-17660019 | None:intergenic | 35.0% |
| ! | GGAACCCACAACATTTTTCT+TGG | + | chr2_1:17659120-17659139 | None:intergenic | 40.0% |
| ! | CGAGCTTTTCAAAAAAAGGG+TGG | - | chr2_1:17659252-17659271 | Msa0198910:CDS | 40.0% |
| TAGGTATGACAGTCTGAGAA+AGG | - | chr2_1:17659340-17659359 | Msa0198910:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | - | chr2_1:17659345-17659364 | Msa0198910:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | - | chr2_1:17659386-17659405 | Msa0198910:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | - | chr2_1:17659387-17659406 | Msa0198910:CDS | 40.0% | |
| CACTACATCCTTGAAAAGTG+TGG | + | chr2_1:17659616-17659635 | None:intergenic | 40.0% | |
| !! | CACACTTTTCAAGGATGTAG+TGG | - | chr2_1:17659614-17659633 | Msa0198910:CDS | 40.0% |
| TTCAAGGATGTAGTGGCTAA+TGG | - | chr2_1:17659621-17659640 | Msa0198910:CDS | 40.0% | |
| TGGCTAATGGAGAATACACT+TGG | - | chr2_1:17659634-17659653 | Msa0198910:CDS | 40.0% | |
| GGCTAATGGAGAATACACTT+GGG | - | chr2_1:17659635-17659654 | Msa0198910:CDS | 40.0% | |
| GTTGGAGCAACAACTGAATT+TGG | - | chr2_1:17659762-17659781 | Msa0198910:intron | 40.0% | |
| AAAACTGGTGGTCAAAAGAG+TGG | - | chr2_1:17659810-17659829 | Msa0198910:CDS | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | - | chr2_1:17659962-17659981 | Msa0198910:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | + | chr2_1:17660065-17660084 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | - | chr2_1:17660071-17660090 | Msa0198910:CDS | 40.0% | |
| ! | TCACACAGGTTAGTCATGAA+TGG | + | chr2_1:17660149-17660168 | None:intergenic | 40.0% |
| ! | GGAACCCACAACATTTTTCT+TGG | + | chr2_1:17659120-17659139 | None:intergenic | 40.0% |
| ! | CGAGCTTTTCAAAAAAAGGG+TGG | - | chr2_1:17659252-17659271 | Msa0198910:CDS | 40.0% |
| TAGGTATGACAGTCTGAGAA+AGG | - | chr2_1:17659340-17659359 | Msa0198910:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | - | chr2_1:17659345-17659364 | Msa0198910:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | - | chr2_1:17659386-17659405 | Msa0198910:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | - | chr2_1:17659387-17659406 | Msa0198910:CDS | 40.0% | |
| CACTACATCCTTGAAAAGTG+TGG | + | chr2_1:17659616-17659635 | None:intergenic | 40.0% | |
| !! | CACACTTTTCAAGGATGTAG+TGG | - | chr2_1:17659614-17659633 | Msa0198910:CDS | 40.0% |
| TTCAAGGATGTAGTGGCTAA+TGG | - | chr2_1:17659621-17659640 | Msa0198910:CDS | 40.0% | |
| TGGCTAATGGAGAATACACT+TGG | - | chr2_1:17659634-17659653 | Msa0198910:CDS | 40.0% | |
| GGCTAATGGAGAATACACTT+GGG | - | chr2_1:17659635-17659654 | Msa0198910:CDS | 40.0% | |
| GTTGGAGCAACAACTGAATT+TGG | - | chr2_1:17659762-17659781 | Msa0198910:intron | 40.0% | |
| AAAACTGGTGGTCAAAAGAG+TGG | - | chr2_1:17659810-17659829 | Msa0198910:CDS | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | - | chr2_1:17659962-17659981 | Msa0198910:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | + | chr2_1:17660065-17660084 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | - | chr2_1:17660071-17660090 | Msa0198910:CDS | 40.0% | |
| ! | TCACACAGGTTAGTCATGAA+TGG | + | chr2_1:17660149-17660168 | None:intergenic | 40.0% |
| ! | ATGTTTGGAGCAAGTCTCCA+AGG | - | chr2_1:17659214-17659233 | Msa0198910:CDS | 45.0% |
| ! | TGTTTGGAGCAAGTCTCCAA+GGG | - | chr2_1:17659215-17659234 | Msa0198910:CDS | 45.0% |
| AACCGGACTGAAGTATGAGA+AGG | - | chr2_1:17659304-17659323 | Msa0198910:CDS | 45.0% | |
| AGCCTTCTCATACTTCAGTC+CGG | + | chr2_1:17659309-17659328 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | - | chr2_1:17659354-17659373 | Msa0198910:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | - | chr2_1:17659391-17659410 | Msa0198910:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | + | chr2_1:17659419-17659438 | None:intergenic | 45.0% |
| GTGGTTAACTCATTGGCGAA+TGG | + | chr2_1:17659597-17659616 | None:intergenic | 45.0% | |
| ! | TGATGATGATGATGAGGCAG+TGG | - | chr2_1:17659704-17659723 | Msa0198910:CDS | 45.0% |
| GTCAAAAGAGTGGTGAGAAG+AGG | - | chr2_1:17659820-17659839 | Msa0198910:CDS | 45.0% | |
| TGCTGATGTTTAAGCCTGCA+AGG | - | chr2_1:17660048-17660067 | Msa0198910:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | - | chr2_1:17660049-17660068 | Msa0198910:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | - | chr2_1:17660079-17660098 | Msa0198910:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | - | chr2_1:17660096-17660115 | Msa0198910:CDS | 45.0% | |
| ! | GGTTAGTCATGAATGGCAGT+GGG | + | chr2_1:17660142-17660161 | None:intergenic | 45.0% |
| ! | AGGTTAGTCATGAATGGCAG+TGG | + | chr2_1:17660143-17660162 | None:intergenic | 45.0% |
| ! | ATGTTTGGAGCAAGTCTCCA+AGG | - | chr2_1:17659214-17659233 | Msa0198910:CDS | 45.0% |
| ! | TGTTTGGAGCAAGTCTCCAA+GGG | - | chr2_1:17659215-17659234 | Msa0198910:CDS | 45.0% |
| AACCGGACTGAAGTATGAGA+AGG | - | chr2_1:17659304-17659323 | Msa0198910:CDS | 45.0% | |
| AGCCTTCTCATACTTCAGTC+CGG | + | chr2_1:17659309-17659328 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | - | chr2_1:17659354-17659373 | Msa0198910:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | - | chr2_1:17659391-17659410 | Msa0198910:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | + | chr2_1:17659419-17659438 | None:intergenic | 45.0% |
| GTGGTTAACTCATTGGCGAA+TGG | + | chr2_1:17659597-17659616 | None:intergenic | 45.0% | |
| ! | TGATGATGATGATGAGGCAG+TGG | - | chr2_1:17659704-17659723 | Msa0198910:CDS | 45.0% |
| GTCAAAAGAGTGGTGAGAAG+AGG | - | chr2_1:17659820-17659839 | Msa0198910:CDS | 45.0% | |
| TGCTGATGTTTAAGCCTGCA+AGG | - | chr2_1:17660048-17660067 | Msa0198910:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | - | chr2_1:17660049-17660068 | Msa0198910:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | - | chr2_1:17660079-17660098 | Msa0198910:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | - | chr2_1:17660096-17660115 | Msa0198910:CDS | 45.0% | |
| ! | GGTTAGTCATGAATGGCAGT+GGG | + | chr2_1:17660142-17660161 | None:intergenic | 45.0% |
| ! | AGGTTAGTCATGAATGGCAG+TGG | + | chr2_1:17660143-17660162 | None:intergenic | 45.0% |
| GTTCCTCCTCACCTAGTGAT+GGG | - | chr2_1:17659135-17659154 | Msa0198910:CDS | 50.0% | |
| TTCCTCCTCACCTAGTGATG+GGG | - | chr2_1:17659136-17659155 | Msa0198910:CDS | 50.0% | |
| ! | GGAGAGAAACTGGATTAGGG+TGG | - | chr2_1:17659390-17659409 | Msa0198910:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | - | chr2_1:17659429-17659448 | Msa0198910:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | - | chr2_1:17659432-17659451 | Msa0198910:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | - | chr2_1:17659433-17659452 | Msa0198910:CDS | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | - | chr2_1:17659648-17659667 | Msa0198910:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | - | chr2_1:17659649-17659668 | Msa0198910:CDS | 50.0% | |
| GATGGCAATACCCCACATGA+TGG | + | chr2_1:17659663-17659682 | None:intergenic | 50.0% | |
| GATAGCGAGGATGCAAGTGT+TGG | - | chr2_1:17659744-17659763 | Msa0198910:intron | 50.0% | |
| TCGTTCTCGCAATGATGCTG+CGG | - | chr2_1:17659935-17659954 | Msa0198910:CDS | 50.0% | |
| GCTGCGGGTAATGCATCTAT+TGG | - | chr2_1:17659951-17659970 | Msa0198910:CDS | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | + | chr2_1:17660087-17660106 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | + | chr2_1:17660088-17660107 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | - | chr2_1:17660087-17660106 | Msa0198910:CDS | 50.0% | |
| GTTCCTCCTCACCTAGTGAT+GGG | - | chr2_1:17659135-17659154 | Msa0198910:CDS | 50.0% | |
| TTCCTCCTCACCTAGTGATG+GGG | - | chr2_1:17659136-17659155 | Msa0198910:CDS | 50.0% | |
| ! | GGAGAGAAACTGGATTAGGG+TGG | - | chr2_1:17659390-17659409 | Msa0198910:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | - | chr2_1:17659429-17659448 | Msa0198910:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | - | chr2_1:17659432-17659451 | Msa0198910:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | - | chr2_1:17659433-17659452 | Msa0198910:CDS | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | - | chr2_1:17659648-17659667 | Msa0198910:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | - | chr2_1:17659649-17659668 | Msa0198910:CDS | 50.0% | |
| GATGGCAATACCCCACATGA+TGG | + | chr2_1:17659663-17659682 | None:intergenic | 50.0% | |
| GATAGCGAGGATGCAAGTGT+TGG | - | chr2_1:17659744-17659763 | Msa0198910:intron | 50.0% | |
| TCGTTCTCGCAATGATGCTG+CGG | - | chr2_1:17659935-17659954 | Msa0198910:CDS | 50.0% | |
| GCTGCGGGTAATGCATCTAT+TGG | - | chr2_1:17659951-17659970 | Msa0198910:CDS | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | + | chr2_1:17660087-17660106 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | + | chr2_1:17660088-17660107 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | - | chr2_1:17660087-17660106 | Msa0198910:CDS | 50.0% | |
| GGTTCCTCCTCACCTAGTGA+TGG | - | chr2_1:17659134-17659153 | Msa0198910:CDS | 55.0% | |
| TCCTCCTCACCTAGTGATGG+GGG | - | chr2_1:17659137-17659156 | Msa0198910:CDS | 55.0% | |
| ! | GTTTTCTGCCCCCCATCACT+AGG | + | chr2_1:17659149-17659168 | None:intergenic | 55.0% |
| GTCTCCAAGGGAGAACGTGT+TGG | - | chr2_1:17659227-17659246 | Msa0198910:CDS | 55.0% | |
| CGTACCAACACGTTCTCCCT+TGG | + | chr2_1:17659234-17659253 | None:intergenic | 55.0% | |
| TTGGTCTCCCACCACTCATC+AGG | + | chr2_1:17659443-17659462 | None:intergenic | 55.0% | |
| ! | GTGGTGGGAGACCAAACAAC+TGG | - | chr2_1:17659448-17659467 | Msa0198910:CDS | 55.0% |
| CACTTGGGCACCATCATGTG+GGG | - | chr2_1:17659650-17659669 | Msa0198910:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | - | chr2_1:17659714-17659733 | Msa0198910:intron | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | - | chr2_1:17659720-17659739 | Msa0198910:intron | 55.0% | |
| AGAAGGATCTGGCGATAGCG+AGG | - | chr2_1:17659731-17659750 | Msa0198910:intron | 55.0% | |
| CGTTCTCGCAATGATGCTGC+GGG | - | chr2_1:17659936-17659955 | Msa0198910:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | - | chr2_1:17659980-17659999 | Msa0198910:CDS | 55.0% | |
| GGTTCCTCCTCACCTAGTGA+TGG | - | chr2_1:17659134-17659153 | Msa0198910:CDS | 55.0% | |
| TCCTCCTCACCTAGTGATGG+GGG | - | chr2_1:17659137-17659156 | Msa0198910:CDS | 55.0% | |
| ! | GTTTTCTGCCCCCCATCACT+AGG | + | chr2_1:17659149-17659168 | None:intergenic | 55.0% |
| GTCTCCAAGGGAGAACGTGT+TGG | - | chr2_1:17659227-17659246 | Msa0198910:CDS | 55.0% | |
| CGTACCAACACGTTCTCCCT+TGG | + | chr2_1:17659234-17659253 | None:intergenic | 55.0% | |
| TTGGTCTCCCACCACTCATC+AGG | + | chr2_1:17659443-17659462 | None:intergenic | 55.0% | |
| ! | GTGGTGGGAGACCAAACAAC+TGG | - | chr2_1:17659448-17659467 | Msa0198910:CDS | 55.0% |
| CACTTGGGCACCATCATGTG+GGG | - | chr2_1:17659650-17659669 | Msa0198910:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | - | chr2_1:17659714-17659733 | Msa0198910:intron | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | - | chr2_1:17659720-17659739 | Msa0198910:intron | 55.0% | |
| AGAAGGATCTGGCGATAGCG+AGG | - | chr2_1:17659731-17659750 | Msa0198910:intron | 55.0% | |
| CGTTCTCGCAATGATGCTGC+GGG | - | chr2_1:17659936-17659955 | Msa0198910:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | - | chr2_1:17659980-17659999 | Msa0198910:CDS | 55.0% | |
| ! | CCTCCTCACCTAGTGATGGG+GGG | - | chr2_1:17659138-17659157 | Msa0198910:CDS | 60.0% |
| ! | CCTCCTCACCTAGTGATGGG+GGG | - | chr2_1:17659138-17659157 | Msa0198910:CDS | 60.0% |
| CCCCCCATCACTAGGTGAGG+AGG | + | chr2_1:17659141-17659160 | None:intergenic | 65.0% | |
| CTGCCCCCCATCACTAGGTG+AGG | + | chr2_1:17659144-17659163 | None:intergenic | 65.0% | |
| CCCCCCATCACTAGGTGAGG+AGG | + | chr2_1:17659141-17659160 | None:intergenic | 65.0% | |
| CTGCCCCCCATCACTAGGTG+AGG | + | chr2_1:17659144-17659163 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 17659107 | 17660172 | 17659107 | ID=Msa0198910;Name=Msa0198910 |
| chr2_1 | mRNA | 17659107 | 17660172 | 17659107 | ID=Msa0198910-mRNA-1;Parent=Msa0198910;Name=Msa0198910-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|326 |
| chr2_1 | exon | 17659810 | 17660172 | 17659810 | ID=Msa0198910-mRNA-1:exon:7489;Parent=Msa0198910-mRNA-1 |
| chr2_1 | exon | 17659107 | 17659724 | 17659107 | ID=Msa0198910-mRNA-1:exon:7488;Parent=Msa0198910-mRNA-1 |
| chr2_1 | CDS | 17659810 | 17660172 | 17659810 | ID=Msa0198910-mRNA-1:cds;Parent=Msa0198910-mRNA-1 |
| chr2_1 | CDS | 17659107 | 17659724 | 17659107 | ID=Msa0198910-mRNA-1:cds;Parent=Msa0198910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
