Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135660 | XP_003589014.1 | 86.335 | 322 | 24 | 3 | 1 | 303 | 1 | 321 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135660 | sp|Q9FFJ8|LIMYB_ARATH | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.71e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135660 | G7IB81 | 86.335 | 322 | 24 | 3 | 1 | 303 | 1 | 321 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031520 | Msa0135660 | 0.843568 | 1.293474e-58 | -8.615850e-47 |
| Msa0042920 | Msa0135660 | 0.819943 | 8.905760e-53 | -8.615850e-47 |
| Msa0044330 | Msa0135660 | 0.813681 | 2.262993e-51 | -8.615850e-47 |
| Msa0135660 | Msa0198900 | 0.819200 | 1.315700e-52 | -8.615850e-47 |
| Msa0135660 | Msa0198910 | 0.877875 | 4.423145e-69 | -8.615850e-47 |
| Msa0135660 | Msa0233080 | 0.889588 | 2.118078e-73 | -8.615850e-47 |
| Msa0135660 | Msa0236510 | -0.802635 | 5.109438e-49 | -8.615850e-47 |
| Msa0135660 | Msa0251640 | 0.924723 | 4.807292e-90 | -8.615850e-47 |
| Msa0135660 | Msa0278190 | 0.832232 | 1.063321e-55 | -8.615850e-47 |
| Msa0135660 | Msa0305190 | 0.807899 | 4.033737e-50 | -8.615850e-47 |
| Msa0135660 | Msa0413410 | 0.809980 | 1.446734e-50 | -8.615850e-47 |
| Msa0135660 | Msa0453580 | 0.801744 | 7.793757e-49 | -8.615850e-47 |
| Msa0135660 | Msa0479340 | 0.822107 | 2.826460e-53 | -8.615850e-47 |
| Msa0135660 | Msa0490140 | 0.903437 | 3.470976e-79 | -8.615850e-47 |
| Msa0135660 | Msa0490150 | 0.804332 | 2.272938e-49 | -8.615850e-47 |
| Msa0135660 | Msa0514320 | 0.894574 | 2.169179e-75 | -8.615850e-47 |
| Msa0135660 | Msa0523940 | 0.819697 | 1.013459e-52 | -8.615850e-47 |
| Msa0135660 | Msa0545700 | 0.812202 | 4.774159e-51 | -8.615850e-47 |
| Msa0135660 | Msa0585230 | 0.806282 | 8.873623e-50 | -8.615850e-47 |
| Msa0135660 | Msa0602980 | 0.878621 | 2.422477e-69 | -8.615850e-47 |
| Msa0135660 | Msa0615010 | 0.808323 | 3.277438e-50 | -8.615850e-47 |
| Msa0135660 | Msa0645300 | 0.945060 | 6.173938e-104 | -8.615850e-47 |
| Msa0135660 | Msa0650630 | 0.806009 | 1.012789e-49 | -8.615850e-47 |
| Msa0135660 | Msa0701010 | 0.814791 | 1.286885e-51 | -8.615850e-47 |
| Msa0135660 | Msa0703780 | 0.805681 | 1.186970e-49 | -8.615850e-47 |
| Msa0135660 | Msa0718100 | 0.813768 | 2.164954e-51 | -8.615850e-47 |
| Msa0135660 | Msa0731940 | 0.808468 | 3.051481e-50 | -8.615850e-47 |
| Msa0135660 | Msa0755180 | 0.819730 | 9.959346e-53 | -8.615850e-47 |
| Msa0135660 | Msa0760130 | 0.803533 | 3.331816e-49 | -8.615850e-47 |
| Msa0135660 | Msa0766630 | 0.825971 | 3.503688e-54 | -8.615850e-47 |
| Msa0135660 | Msa0767720 | 0.805864 | 1.086531e-49 | -8.615850e-47 |
| Msa0135660 | Msa0768290 | 0.820739 | 5.850273e-53 | -8.615850e-47 |
| Msa0135660 | Msa0768370 | 0.829055 | 6.374803e-55 | -8.615850e-47 |
| Msa0135660 | Msa0773180 | 0.844766 | 6.169608e-59 | -8.615850e-47 |
| Msa0135660 | Msa0784290 | 0.802799 | 4.727075e-49 | -8.615850e-47 |
| Msa0135660 | Msa0804810 | 0.804334 | 2.270222e-49 | -8.615850e-47 |
| Msa0135660 | Msa0820850 | 0.820162 | 7.936720e-53 | -8.615850e-47 |
| Msa0135660 | Msa0824590 | 0.804238 | 2.377878e-49 | -8.615850e-47 |
| Msa0135660 | Msa0831850 | 0.817005 | 4.127373e-52 | -8.615850e-47 |
| Msa0135660 | Msa0832340 | 0.805641 | 1.210103e-49 | -8.615850e-47 |
| Msa0135660 | Msa0844490 | 0.840699 | 7.430536e-58 | -8.615850e-47 |
| Msa0135660 | Msa0848960 | 0.801802 | 7.581840e-49 | -8.615850e-47 |
| Msa0135660 | Msa0849030 | 0.805342 | 1.398293e-49 | -8.615850e-47 |
| Msa0135660 | Msa0853520 | 0.802435 | 5.617507e-49 | -8.615850e-47 |
| Msa0135660 | Msa0857640 | 0.809929 | 1.484057e-50 | -8.615850e-47 |
| Msa0135660 | Msa0861130 | 0.816708 | 4.810780e-52 | -8.615850e-47 |
| Msa0135660 | Msa0864070 | 0.807494 | 4.917215e-50 | -8.615850e-47 |
| Msa0135660 | Msa0877250 | 0.820536 | 6.514548e-53 | -8.615850e-47 |
| Msa0135660 | Msa0897330 | 0.822097 | 2.841753e-53 | -8.615850e-47 |
| Msa0135660 | Msa0899430 | 0.846584 | 1.981393e-59 | -8.615850e-47 |
| Msa0135660 | Msa0899450 | 0.858199 | 9.707838e-63 | -8.615850e-47 |
| Msa0135660 | Msa0914270 | 0.836234 | 1.054305e-56 | -8.615850e-47 |
| Msa0135660 | Msa0927380 | 0.852765 | 3.725218e-61 | -8.615850e-47 |
| Msa0135660 | Msa0948320 | 0.872203 | 3.807746e-67 | -8.615850e-47 |
| Msa0135660 | Msa0958550 | 0.838640 | 2.550559e-57 | -8.615850e-47 |
| Msa0135660 | Msa0964900 | 0.843665 | 1.218818e-58 | -8.615850e-47 |
| Msa0135660 | Msa0973100 | 0.805066 | 1.596874e-49 | -8.615850e-47 |
| Msa0135660 | Msa0974070 | 0.800814 | 1.207924e-48 | -8.615850e-47 |
| Msa0135660 | Msa0974080 | 0.844414 | 7.674598e-59 | -8.615850e-47 |
| Msa0135660 | Msa0976670 | 0.817890 | 2.607075e-52 | -8.615850e-47 |
| Msa0135660 | Msa1000890 | 0.825442 | 4.678467e-54 | -8.615850e-47 |
| Msa0135660 | Msa1000900 | 0.824268 | 8.848357e-54 | -8.615850e-47 |
| Msa0135660 | Msa1002850 | 0.808139 | 3.586694e-50 | -8.615850e-47 |
| Msa0135660 | Msa1023950 | 0.817975 | 2.495203e-52 | -8.615850e-47 |
| Msa0135660 | Msa1075540 | 0.800743 | 1.248885e-48 | -8.615850e-47 |
| Msa0135660 | Msa1110090 | 0.808330 | 3.266374e-50 | -8.615850e-47 |
| Msa0135660 | Msa1111870 | 0.811710 | 6.109816e-51 | -8.615850e-47 |
| Msa0135660 | Msa1113170 | 0.811495 | 6.804167e-51 | -8.615850e-47 |
| Msa0135660 | Msa1115870 | 0.800739 | 1.251448e-48 | -8.615850e-47 |
| Msa0135660 | Msa1117150 | 0.802397 | 5.718985e-49 | -8.615850e-47 |
| Msa0135660 | Msa1120610 | 0.803608 | 3.214234e-49 | -8.615850e-47 |
| Msa0135660 | Msa1121480 | 0.857298 | 1.795553e-62 | -8.615850e-47 |
| Msa0135660 | Msa1121490 | 0.859562 | 3.797088e-63 | -8.615850e-47 |
| Msa0135660 | Msa1137570 | 0.830463 | 2.895724e-55 | -8.615850e-47 |
| Msa0135660 | Msa1162550 | -0.800569 | 1.355359e-48 | -8.615850e-47 |
| Msa0135660 | Msa1184420 | 0.805775 | 1.134320e-49 | -8.615850e-47 |
| Msa0135660 | Msa1185110 | 0.808951 | 2.406077e-50 | -8.615850e-47 |
| Msa0135660 | Msa1195190 | 0.809664 | 1.692032e-50 | -8.615850e-47 |
| Msa0135660 | Msa1209530 | 0.804381 | 2.219870e-49 | -8.615850e-47 |
| Msa0135660 | Msa1248310 | 0.801443 | 8.983255e-49 | -8.615850e-47 |
| Msa0135660 | Msa1284680 | 0.824394 | 8.268226e-54 | -8.615850e-47 |
| Msa0135660 | Msa1286800 | 0.814447 | 1.533304e-51 | -8.615850e-47 |
| Msa0135660 | Msa1353470 | 0.816693 | 4.847636e-52 | -8.615850e-47 |
| Msa0135660 | Msa1366810 | 0.819366 | 1.206211e-52 | -8.615850e-47 |
| Msa0135660 | Msa1394310 | 0.832929 | 7.141678e-56 | -8.615850e-47 |
| Msa0135660 | Msa1420820 | 0.803959 | 2.717063e-49 | -8.615850e-47 |
| Msa0135660 | Msa1444440 | 0.804686 | 1.917637e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135660 | MtrunA17_Chr2g0285481 | 58.642 | 324 | 109 | 6 | 2 | 302 | 1 | 322 | 4.34e-127 | 365 |
| Msa0135660 | MtrunA17_Chr1g0172741 | 58.025 | 324 | 111 | 6 | 2 | 302 | 1 | 322 | 1.08e-125 | 362 |
| Msa0135660 | MtrunA17_Chr8g0334551 | 51.829 | 328 | 132 | 4 | 1 | 302 | 1 | 328 | 1.22e-110 | 323 |
| Msa0135660 | MtrunA17_Chr2g0321391 | 63.525 | 244 | 74 | 3 | 72 | 302 | 3 | 244 | 1.97e-106 | 310 |
| Msa0135660 | MtrunA17_Chr5g0422701 | 64.216 | 204 | 70 | 2 | 100 | 302 | 11 | 212 | 1.82e-87 | 260 |
| Msa0135660 | MtrunA17_Chr2g0295811 | 40.183 | 219 | 113 | 6 | 102 | 302 | 12 | 230 | 6.11e-42 | 145 |
| Msa0135660 | MtrunA17_Chr5g0422691 | 57.609 | 92 | 31 | 2 | 13 | 96 | 14 | 105 | 1.46e-29 | 108 |
| Msa0135660 | MtrunA17_Chr2g0295611 | 58.974 | 78 | 31 | 1 | 99 | 175 | 19 | 96 | 3.80e-22 | 89.0 |
| Msa0135660 | MtrunA17_Chr6g0469501 | 63.793 | 58 | 21 | 0 | 245 | 302 | 1 | 58 | 5.93e-22 | 87.0 |
| Msa0135660 | MtrunA17_Chr8g0362511 | 28.155 | 309 | 168 | 12 | 21 | 291 | 67 | 359 | 1.01e-19 | 88.2 |
| Msa0135660 | MtrunA17_Chr3g0113081 | 28.479 | 309 | 140 | 11 | 12 | 292 | 373 | 628 | 1.19e-18 | 86.3 |
| Msa0135660 | MtrunA17_Chr3g0113081 | 33.553 | 152 | 73 | 4 | 22 | 154 | 185 | 327 | 7.89e-18 | 84.0 |
| Msa0135660 | MtrunA17_Chr3g0113081 | 33.582 | 134 | 63 | 4 | 11 | 125 | 3 | 129 | 4.35e-13 | 69.7 |
| Msa0135660 | MtrunA17_Chr5g0402821 | 27.215 | 316 | 181 | 11 | 22 | 296 | 16 | 323 | 5.48e-18 | 82.8 |
| Msa0135660 | MtrunA17_Chr5g0405761 | 26.333 | 300 | 170 | 10 | 19 | 293 | 47 | 320 | 1.13e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135660 | AT5G05800.1 | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.80e-16 | 78.2 |
| Msa0135660 | AT5G05800.5 | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.80e-16 | 78.2 |
| Msa0135660 | AT5G05800.3 | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.80e-16 | 78.2 |
| Msa0135660 | AT5G05800.2 | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.80e-16 | 78.2 |
| Msa0135660 | AT5G05800.4 | 23.344 | 317 | 199 | 8 | 6 | 303 | 156 | 447 | 5.80e-16 | 78.2 |
| Msa0135660 | AT3G11290.2 | 24.272 | 309 | 174 | 10 | 20 | 291 | 163 | 448 | 3.27e-12 | 67.0 |
| Msa0135660 | AT3G11290.1 | 24.272 | 309 | 174 | 10 | 20 | 291 | 163 | 448 | 3.27e-12 | 67.0 |
Find 66 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCATGGTATAACTTATT+TGG | 0.134716 | 1_3:-67331680 | Msa0135660:CDS |
| ACAACTGAATTTGGAAATAT+TGG | 0.148866 | 1_3:-67331277 | Msa0135660:CDS |
| GTTGGAGCAACAACTGAATT+TGG | 0.213211 | 1_3:-67331286 | Msa0135660:CDS |
| GGCAGAAAACAAAAGCTAAT+TGG | 0.275009 | 1_3:-67331890 | Msa0135660:CDS |
| AACTTATTTGGGAGAGAAAC+TGG | 0.287945 | 1_3:-67331668 | Msa0135660:CDS |
| TTGGGAGAGAAACTGGATTA+GGG | 0.298488 | 1_3:-67331661 | Msa0135660:CDS |
| TTTGGGAGAGAAACTGGATT+AGG | 0.315464 | 1_3:-67331662 | Msa0135660:CDS |
| GAAATAAACATCTCCCTTGC+AGG | 0.323302 | 1_3:+67330986 | None:intergenic |
| AAACTTTGTGAAAGCATGTT+TGG | 0.334075 | 1_3:-67331850 | Msa0135660:CDS |
| GTCCGGTTAAATTATGAAAT+CGG | 0.352053 | 1_3:+67331759 | None:intergenic |
| CAACTGAATTTGGAAATATT+GGG | 0.356640 | 1_3:-67331276 | Msa0135660:CDS |
| GAGCATGGTATAACTTATTT+GGG | 0.363157 | 1_3:-67331679 | Msa0135660:CDS |
| TTCAAGGATGTAGTGGCTAA+TGG | 0.366838 | 1_3:-67331427 | Msa0135660:CDS |
| CAGAGGAGAAGAGGTTGAAT+TGG | 0.373243 | 1_3:-67330952 | Msa0135660:CDS |
| GTCCGATTTCATAATTTAAC+CGG | 0.374307 | 1_3:-67331761 | Msa0135660:CDS |
| GCAGAAAACAAAAGCTAATT+GGG | 0.414370 | 1_3:-67331889 | Msa0135660:CDS |
| GTTCCTCCTCACCTAGTGAT+GGG | 0.415978 | 1_3:-67331914 | Msa0135660:CDS |
| GAAAAGTGTGGTTAACTCAT+TGG | 0.420206 | 1_3:+67331447 | None:intergenic |
| AAAAGGGTGGACAAATATTA+GGG | 0.422862 | 1_3:-67331783 | Msa0135660:intron |
| GGTTCCTCCTCACCTAGTGA+TGG | 0.438340 | 1_3:-67331915 | Msa0135660:CDS |
| TTCCTCCTCACCTAGTGATG+GGG | 0.476214 | 1_3:-67331913 | Msa0135660:CDS |
| AGAAGGCTCAACTAAAGAAT+AGG | 0.479515 | 1_3:-67331727 | Msa0135660:CDS |
| TCCTCCTCACCTAGTGATGG+GGG | 0.484199 | 1_3:-67331912 | Msa0135660:CDS |
| GCTGCAGGTAATGCATCTAT+TGG | 0.501171 | 1_3:-67331097 | Msa0135660:CDS |
| GATGAGGCAGTGGCTGTAGA+AGG | 0.502147 | 1_3:-67331334 | Msa0135660:CDS |
| AGCCTTCTCATACTTCAGTC+CGG | 0.504703 | 1_3:+67331742 | None:intergenic |
| CGTACCAACACGTTCTCCCT+TGG | 0.505137 | 1_3:+67331818 | None:intergenic |
| AGGTTAGTCATGAACGGCAG+TGG | 0.514270 | 1_3:+67330908 | None:intergenic |
| TGCTGATGTTTAAGCCTGCA+AGG | 0.517021 | 1_3:-67331000 | Msa0135660:CDS |
| TGGCTAATGGAGAGTACACT+TGG | 0.522261 | 1_3:-67331414 | Msa0135660:CDS |
| GCAGTGGCTGTAGAAGGATC+TGG | 0.527670 | 1_3:-67331328 | Msa0135660:CDS |
| ATGACAGTCTGAGAAAGGAT+TGG | 0.531322 | 1_3:-67331703 | Msa0135660:CDS |
| CTTCTCCTCTGAACCTCGTA+GGG | 0.535159 | 1_3:+67330964 | None:intergenic |
| CGTTCTCGCAATGATGCTGC+AGG | 0.541746 | 1_3:-67331112 | Msa0135660:CDS |
| CCATTACATCCTAGTCACAT+AGG | 0.541785 | 1_3:+67330888 | None:intergenic |
| TAGGTATGACAGTCTGAGAA+AGG | 0.543958 | 1_3:-67331708 | Msa0135660:CDS |
| TATTTCCCTACGAGGTTCAG+AGG | 0.555424 | 1_3:-67330969 | Msa0135660:CDS |
| GGAGAGAAACTGGATTAGGG+TGG | 0.557144 | 1_3:-67331658 | Msa0135660:CDS |
| ATCATTTGAGACTTCATCCA+TGG | 0.558263 | 1_3:+67331051 | None:intergenic |
| GTCAAAAGAGTGGTGAGAAG+AGG | 0.562252 | 1_3:-67331228 | Msa0135660:CDS |
| TACGAGGTTCAGAGGAGAAG+AGG | 0.567800 | 1_3:-67330961 | Msa0135660:CDS |
| ATGTTTGGAGCAAGTCTCCA+AGG | 0.570714 | 1_3:-67331835 | Msa0135660:CDS |
| TACACTTGGGCACCATCATG+TGG | 0.573130 | 1_3:-67331400 | Msa0135660:CDS |
| TGCATCTATTGGTGAAGTGA+TGG | 0.591393 | 1_3:-67331086 | Msa0135660:CDS |
| GCTGATGTTTAAGCCTGCAA+GGG | 0.594722 | 1_3:-67330999 | Msa0135660:CDS |
| TCTTCTCCTCTGAACCTCGT+AGG | 0.595412 | 1_3:+67330963 | None:intergenic |
| GATAGCGAGGATGCAAGTGT+TGG | 0.599986 | 1_3:-67331304 | Msa0135660:CDS |
| GATGGCAATACCCCACATGA+TGG | 0.601622 | 1_3:+67331388 | None:intergenic |
| CCTCCTCACCTAGTGATGGG+GGG | 0.608278 | 1_3:-67331911 | Msa0135660:CDS |
| TGAGAAAGGATTGGAGAGCA+TGG | 0.612846 | 1_3:-67331694 | Msa0135660:CDS |
| GCTACAACAGTGTTGTTCAC+AGG | 0.614063 | 1_3:+67331632 | None:intergenic |
| GGTTAGTCATGAACGGCAGT+GGG | 0.617530 | 1_3:+67330909 | None:intergenic |
| AGAAGGATCTGGCGATAGCG+AGG | 0.624952 | 1_3:-67331317 | Msa0135660:CDS |
| TCACATAGGTTAGTCATGAA+CGG | 0.625522 | 1_3:+67330902 | None:intergenic |
| AACCGGACTGAAGTATGAGA+AGG | 0.626830 | 1_3:-67331744 | Msa0135660:CDS |
| ACACTTGGGCACCATCATGT+GGG | 0.626839 | 1_3:-67331399 | Msa0135660:CDS |
| CACTACATCCTTGAAAAGTG+TGG | 0.627204 | 1_3:+67331435 | None:intergenic |
| AAAACTGATGGTCAAAAGAG+TGG | 0.632803 | 1_3:-67331238 | Msa0135660:CDS |
| GTGGTTAACTCATTGGCGAA+TGG | 0.634000 | 1_3:+67331454 | None:intergenic |
| GAGAGAAACTGGATTAGGGT+GGG | 0.643865 | 1_3:-67331657 | Msa0135660:CDS |
| GTCTCCAAGGGAGAACGTGT+TGG | 0.644338 | 1_3:-67331822 | Msa0135660:intron |
| CACTTGGGCACCATCATGTG+GGG | 0.646121 | 1_3:-67331398 | Msa0135660:CDS |
| TGTTTGGAGCAAGTCTCCAA+GGG | 0.647436 | 1_3:-67331834 | Msa0135660:CDS |
| GATGGCTGAGCTTCACACCA+TGG | 0.663371 | 1_3:-67331068 | Msa0135660:CDS |
| GGCTAATGGAGAGTACACTT+GGG | 0.684848 | 1_3:-67331413 | Msa0135660:CDS |
| GAGATGTTTATTTCCCTACG+AGG | 0.736446 | 1_3:-67330977 | Msa0135660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAAAATTTAGAAATA+AGG | - | chr1_3:67331362-67331381 | Msa0135660:CDS | 10.0% |
| !! | TATGAAAAATTTAGAAATAA+GGG | - | chr1_3:67331363-67331382 | Msa0135660:CDS | 10.0% |
| !! | TTATGAAAAATTTAGAAATA+AGG | - | chr1_3:67331362-67331381 | Msa0135660:CDS | 10.0% |
| !! | TATGAAAAATTTAGAAATAA+GGG | - | chr1_3:67331363-67331382 | Msa0135660:CDS | 10.0% |
| !!! | TTCTAAATTTTTCATAAAGA+GGG | + | chr1_3:67331359-67331378 | None:intergenic | 15.0% |
| !!! | TTTCTAAATTTTTCATAAAG+AGG | + | chr1_3:67331360-67331379 | None:intergenic | 15.0% |
| !! | ATGAAAAATTTAGAAATAAG+GGG | - | chr1_3:67331364-67331383 | Msa0135660:CDS | 15.0% |
| !!! | TTCTAAATTTTTCATAAAGA+GGG | + | chr1_3:67331359-67331378 | None:intergenic | 15.0% |
| !!! | TTTCTAAATTTTTCATAAAG+AGG | + | chr1_3:67331360-67331379 | None:intergenic | 15.0% |
| !! | ATGAAAAATTTAGAAATAAG+GGG | - | chr1_3:67331364-67331383 | Msa0135660:CDS | 15.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | - | chr1_3:67330908-67330927 | Msa0135660:CDS | 25.0% |
| !! | TACGAGCTTTTCAAAAAAAA+GGG | - | chr1_3:67331045-67331064 | Msa0135660:CDS | 25.0% |
| ! | TGTATTACATATCAGTTGTT+TGG | + | chr1_3:67331258-67331277 | None:intergenic | 25.0% |
| ! | ACAACTGAATTTGGAAATAT+TGG | - | chr1_3:67331567-67331586 | Msa0135660:intron | 25.0% |
| ! | CAACTGAATTTGGAAATATT+GGG | - | chr1_3:67331568-67331587 | Msa0135660:intron | 25.0% |
| ! | AATTCTTCACAAAAAACTGA+TGG | - | chr1_3:67331594-67331613 | Msa0135660:intron | 25.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | - | chr1_3:67330908-67330927 | Msa0135660:CDS | 25.0% |
| !! | TACGAGCTTTTCAAAAAAAA+GGG | - | chr1_3:67331045-67331064 | Msa0135660:CDS | 25.0% |
| ! | TGTATTACATATCAGTTGTT+TGG | + | chr1_3:67331258-67331277 | None:intergenic | 25.0% |
| ! | ACAACTGAATTTGGAAATAT+TGG | - | chr1_3:67331567-67331586 | Msa0135660:intron | 25.0% |
| ! | CAACTGAATTTGGAAATATT+GGG | - | chr1_3:67331568-67331587 | Msa0135660:intron | 25.0% |
| ! | AATTCTTCACAAAAAACTGA+TGG | - | chr1_3:67331594-67331613 | Msa0135660:intron | 25.0% |
| GAATACCAAGAAAAATGTTG+TGG | - | chr1_3:67330907-67330926 | Msa0135660:CDS | 30.0% | |
| GCAGAAAACAAAAGCTAATT+GGG | - | chr1_3:67330955-67330974 | Msa0135660:CDS | 30.0% | |
| ! | AAACTTTGTGAAAGCATGTT+TGG | - | chr1_3:67330994-67331013 | Msa0135660:CDS | 30.0% |
| ! | GTACGAGCTTTTCAAAAAAA+AGG | - | chr1_3:67331044-67331063 | Msa0135660:CDS | 30.0% |
| AAAAAGGGTGGACAAATATT+AGG | - | chr1_3:67331060-67331079 | Msa0135660:CDS | 30.0% | |
| AAAAGGGTGGACAAATATTA+GGG | - | chr1_3:67331061-67331080 | Msa0135660:CDS | 30.0% | |
| GTCCGATTTCATAATTTAAC+CGG | - | chr1_3:67331083-67331102 | Msa0135660:CDS | 30.0% | |
| GTCCGGTTAAATTATGAAAT+CGG | + | chr1_3:67331088-67331107 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | - | chr1_3:67331164-67331183 | Msa0135660:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | - | chr1_3:67331165-67331184 | Msa0135660:CDS | 30.0% | |
| AACACGAGTATACATATCTA+AGG | + | chr1_3:67331301-67331320 | None:intergenic | 30.0% | |
| ! | TCATCATTTTCAAACACAGA+TGG | + | chr1_3:67331477-67331496 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | - | chr1_3:67331494-67331513 | Msa0135660:CDS | 30.0% |
| GAATACCAAGAAAAATGTTG+TGG | - | chr1_3:67330907-67330926 | Msa0135660:CDS | 30.0% | |
| GCAGAAAACAAAAGCTAATT+GGG | - | chr1_3:67330955-67330974 | Msa0135660:CDS | 30.0% | |
| ! | AAACTTTGTGAAAGCATGTT+TGG | - | chr1_3:67330994-67331013 | Msa0135660:CDS | 30.0% |
| ! | GTACGAGCTTTTCAAAAAAA+AGG | - | chr1_3:67331044-67331063 | Msa0135660:CDS | 30.0% |
| AAAAAGGGTGGACAAATATT+AGG | - | chr1_3:67331060-67331079 | Msa0135660:CDS | 30.0% | |
| AAAAGGGTGGACAAATATTA+GGG | - | chr1_3:67331061-67331080 | Msa0135660:CDS | 30.0% | |
| GTCCGATTTCATAATTTAAC+CGG | - | chr1_3:67331083-67331102 | Msa0135660:CDS | 30.0% | |
| GTCCGGTTAAATTATGAAAT+CGG | + | chr1_3:67331088-67331107 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | - | chr1_3:67331164-67331183 | Msa0135660:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | - | chr1_3:67331165-67331184 | Msa0135660:CDS | 30.0% | |
| AACACGAGTATACATATCTA+AGG | + | chr1_3:67331301-67331320 | None:intergenic | 30.0% | |
| ! | TCATCATTTTCAAACACAGA+TGG | + | chr1_3:67331477-67331496 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | - | chr1_3:67331494-67331513 | Msa0135660:CDS | 30.0% |
| GGCAGAAAACAAAAGCTAAT+TGG | - | chr1_3:67330954-67330973 | Msa0135660:CDS | 35.0% | |
| ! | GAGCTTTTCAAAAAAAAGGG+TGG | - | chr1_3:67331048-67331067 | Msa0135660:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | - | chr1_3:67331117-67331136 | Msa0135660:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | - | chr1_3:67331176-67331195 | Msa0135660:CDS | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | - | chr1_3:67331329-67331348 | Msa0135660:CDS | 35.0% | |
| ! | GAAAAGTGTGGTTAACTCAT+TGG | + | chr1_3:67331400-67331419 | None:intergenic | 35.0% |
| ! | TGAGTTAACCACACTTTTCA+AGG | - | chr1_3:67331401-67331420 | Msa0135660:CDS | 35.0% |
| AAAACTGATGGTCAAAAGAG+TGG | - | chr1_3:67331606-67331625 | Msa0135660:intron | 35.0% | |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | + | chr1_3:67331666-67331685 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | + | chr1_3:67331796-67331815 | None:intergenic | 35.0% |
| ! | TCACATAGGTTAGTCATGAA+CGG | + | chr1_3:67331945-67331964 | None:intergenic | 35.0% |
| GGCAGAAAACAAAAGCTAAT+TGG | - | chr1_3:67330954-67330973 | Msa0135660:CDS | 35.0% | |
| ! | GAGCTTTTCAAAAAAAAGGG+TGG | - | chr1_3:67331048-67331067 | Msa0135660:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | - | chr1_3:67331117-67331136 | Msa0135660:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | - | chr1_3:67331176-67331195 | Msa0135660:CDS | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | - | chr1_3:67331329-67331348 | Msa0135660:CDS | 35.0% | |
| ! | GAAAAGTGTGGTTAACTCAT+TGG | + | chr1_3:67331400-67331419 | None:intergenic | 35.0% |
| ! | TGAGTTAACCACACTTTTCA+AGG | - | chr1_3:67331401-67331420 | Msa0135660:CDS | 35.0% |
| AAAACTGATGGTCAAAAGAG+TGG | - | chr1_3:67331606-67331625 | Msa0135660:intron | 35.0% | |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | + | chr1_3:67331666-67331685 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | + | chr1_3:67331796-67331815 | None:intergenic | 35.0% |
| ! | TCACATAGGTTAGTCATGAA+CGG | + | chr1_3:67331945-67331964 | None:intergenic | 35.0% |
| ! | GGAACCCACAACATTTTTCT+TGG | + | chr1_3:67330915-67330934 | None:intergenic | 40.0% |
| TAGGTATGACAGTCTGAGAA+AGG | - | chr1_3:67331136-67331155 | Msa0135660:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | - | chr1_3:67331141-67331160 | Msa0135660:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | - | chr1_3:67331182-67331201 | Msa0135660:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | - | chr1_3:67331183-67331202 | Msa0135660:CDS | 40.0% | |
| CACTACATCCTTGAAAAGTG+TGG | + | chr1_3:67331412-67331431 | None:intergenic | 40.0% | |
| !! | CACACTTTTCAAGGATGTAG+TGG | - | chr1_3:67331410-67331429 | Msa0135660:CDS | 40.0% |
| TTCAAGGATGTAGTGGCTAA+TGG | - | chr1_3:67331417-67331436 | Msa0135660:CDS | 40.0% | |
| GTTGGAGCAACAACTGAATT+TGG | - | chr1_3:67331558-67331577 | Msa0135660:intron | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | - | chr1_3:67331758-67331777 | Msa0135660:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | + | chr1_3:67331861-67331880 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | - | chr1_3:67331867-67331886 | Msa0135660:CDS | 40.0% | |
| ! | GGAACCCACAACATTTTTCT+TGG | + | chr1_3:67330915-67330934 | None:intergenic | 40.0% |
| TAGGTATGACAGTCTGAGAA+AGG | - | chr1_3:67331136-67331155 | Msa0135660:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | - | chr1_3:67331141-67331160 | Msa0135660:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | - | chr1_3:67331182-67331201 | Msa0135660:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | - | chr1_3:67331183-67331202 | Msa0135660:CDS | 40.0% | |
| CACTACATCCTTGAAAAGTG+TGG | + | chr1_3:67331412-67331431 | None:intergenic | 40.0% | |
| !! | CACACTTTTCAAGGATGTAG+TGG | - | chr1_3:67331410-67331429 | Msa0135660:CDS | 40.0% |
| TTCAAGGATGTAGTGGCTAA+TGG | - | chr1_3:67331417-67331436 | Msa0135660:CDS | 40.0% | |
| GTTGGAGCAACAACTGAATT+TGG | - | chr1_3:67331558-67331577 | Msa0135660:intron | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | - | chr1_3:67331758-67331777 | Msa0135660:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | + | chr1_3:67331861-67331880 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | - | chr1_3:67331867-67331886 | Msa0135660:CDS | 40.0% | |
| ! | ATGTTTGGAGCAAGTCTCCA+AGG | - | chr1_3:67331009-67331028 | Msa0135660:CDS | 45.0% |
| ! | TGTTTGGAGCAAGTCTCCAA+GGG | - | chr1_3:67331010-67331029 | Msa0135660:CDS | 45.0% |
| AACCGGACTGAAGTATGAGA+AGG | - | chr1_3:67331100-67331119 | Msa0135660:CDS | 45.0% | |
| AGCCTTCTCATACTTCAGTC+CGG | + | chr1_3:67331105-67331124 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | - | chr1_3:67331150-67331169 | Msa0135660:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | - | chr1_3:67331187-67331206 | Msa0135660:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | + | chr1_3:67331215-67331234 | None:intergenic | 45.0% |
| GTGGTTAACTCATTGGCGAA+TGG | + | chr1_3:67331393-67331412 | None:intergenic | 45.0% | |
| ! | TGGCTAATGGAGAGTACACT+TGG | - | chr1_3:67331430-67331449 | Msa0135660:CDS | 45.0% |
| ! | GGCTAATGGAGAGTACACTT+GGG | - | chr1_3:67331431-67331450 | Msa0135660:CDS | 45.0% |
| ! | TGATGATGATGATGAGGCAG+TGG | - | chr1_3:67331500-67331519 | Msa0135660:intron | 45.0% |
| GTCAAAAGAGTGGTGAGAAG+AGG | - | chr1_3:67331616-67331635 | Msa0135660:intron | 45.0% | |
| GCTGCAGGTAATGCATCTAT+TGG | - | chr1_3:67331747-67331766 | Msa0135660:CDS | 45.0% | |
| TGCTGATGTTTAAGCCTGCA+AGG | - | chr1_3:67331844-67331863 | Msa0135660:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | - | chr1_3:67331845-67331864 | Msa0135660:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | - | chr1_3:67331875-67331894 | Msa0135660:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | - | chr1_3:67331892-67331911 | Msa0135660:CDS | 45.0% | |
| ! | ATGTTTGGAGCAAGTCTCCA+AGG | - | chr1_3:67331009-67331028 | Msa0135660:CDS | 45.0% |
| ! | TGTTTGGAGCAAGTCTCCAA+GGG | - | chr1_3:67331010-67331029 | Msa0135660:CDS | 45.0% |
| AACCGGACTGAAGTATGAGA+AGG | - | chr1_3:67331100-67331119 | Msa0135660:CDS | 45.0% | |
| AGCCTTCTCATACTTCAGTC+CGG | + | chr1_3:67331105-67331124 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | - | chr1_3:67331150-67331169 | Msa0135660:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | - | chr1_3:67331187-67331206 | Msa0135660:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | + | chr1_3:67331215-67331234 | None:intergenic | 45.0% |
| GTGGTTAACTCATTGGCGAA+TGG | + | chr1_3:67331393-67331412 | None:intergenic | 45.0% | |
| ! | TGGCTAATGGAGAGTACACT+TGG | - | chr1_3:67331430-67331449 | Msa0135660:CDS | 45.0% |
| ! | GGCTAATGGAGAGTACACTT+GGG | - | chr1_3:67331431-67331450 | Msa0135660:CDS | 45.0% |
| ! | TGATGATGATGATGAGGCAG+TGG | - | chr1_3:67331500-67331519 | Msa0135660:intron | 45.0% |
| GTCAAAAGAGTGGTGAGAAG+AGG | - | chr1_3:67331616-67331635 | Msa0135660:intron | 45.0% | |
| GCTGCAGGTAATGCATCTAT+TGG | - | chr1_3:67331747-67331766 | Msa0135660:CDS | 45.0% | |
| TGCTGATGTTTAAGCCTGCA+AGG | - | chr1_3:67331844-67331863 | Msa0135660:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | - | chr1_3:67331845-67331864 | Msa0135660:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | - | chr1_3:67331875-67331894 | Msa0135660:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | - | chr1_3:67331892-67331911 | Msa0135660:CDS | 45.0% | |
| GTTCCTCCTCACCTAGTGAT+GGG | - | chr1_3:67330930-67330949 | Msa0135660:CDS | 50.0% | |
| TTCCTCCTCACCTAGTGATG+GGG | - | chr1_3:67330931-67330950 | Msa0135660:CDS | 50.0% | |
| ! | GGAGAGAAACTGGATTAGGG+TGG | - | chr1_3:67331186-67331205 | Msa0135660:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | - | chr1_3:67331225-67331244 | Msa0135660:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | - | chr1_3:67331228-67331247 | Msa0135660:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | - | chr1_3:67331229-67331248 | Msa0135660:CDS | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | - | chr1_3:67331444-67331463 | Msa0135660:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | - | chr1_3:67331445-67331464 | Msa0135660:CDS | 50.0% | |
| GATGGCAATACCCCACATGA+TGG | + | chr1_3:67331459-67331478 | None:intergenic | 50.0% | |
| GATAGCGAGGATGCAAGTGT+TGG | - | chr1_3:67331540-67331559 | Msa0135660:intron | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | + | chr1_3:67331883-67331902 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | + | chr1_3:67331884-67331903 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | - | chr1_3:67331883-67331902 | Msa0135660:CDS | 50.0% | |
| ! | GGTTAGTCATGAACGGCAGT+GGG | + | chr1_3:67331938-67331957 | None:intergenic | 50.0% |
| ! | AGGTTAGTCATGAACGGCAG+TGG | + | chr1_3:67331939-67331958 | None:intergenic | 50.0% |
| GTTCCTCCTCACCTAGTGAT+GGG | - | chr1_3:67330930-67330949 | Msa0135660:CDS | 50.0% | |
| TTCCTCCTCACCTAGTGATG+GGG | - | chr1_3:67330931-67330950 | Msa0135660:CDS | 50.0% | |
| ! | GGAGAGAAACTGGATTAGGG+TGG | - | chr1_3:67331186-67331205 | Msa0135660:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | - | chr1_3:67331225-67331244 | Msa0135660:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | - | chr1_3:67331228-67331247 | Msa0135660:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | - | chr1_3:67331229-67331248 | Msa0135660:CDS | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | - | chr1_3:67331444-67331463 | Msa0135660:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | - | chr1_3:67331445-67331464 | Msa0135660:CDS | 50.0% | |
| GATGGCAATACCCCACATGA+TGG | + | chr1_3:67331459-67331478 | None:intergenic | 50.0% | |
| GATAGCGAGGATGCAAGTGT+TGG | - | chr1_3:67331540-67331559 | Msa0135660:intron | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | + | chr1_3:67331883-67331902 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | + | chr1_3:67331884-67331903 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | - | chr1_3:67331883-67331902 | Msa0135660:CDS | 50.0% | |
| ! | GGTTAGTCATGAACGGCAGT+GGG | + | chr1_3:67331938-67331957 | None:intergenic | 50.0% |
| ! | AGGTTAGTCATGAACGGCAG+TGG | + | chr1_3:67331939-67331958 | None:intergenic | 50.0% |
| GGTTCCTCCTCACCTAGTGA+TGG | - | chr1_3:67330929-67330948 | Msa0135660:CDS | 55.0% | |
| TCCTCCTCACCTAGTGATGG+GGG | - | chr1_3:67330932-67330951 | Msa0135660:CDS | 55.0% | |
| ! | GTTTTCTGCCCCCCATCACT+AGG | + | chr1_3:67330944-67330963 | None:intergenic | 55.0% |
| GTCTCCAAGGGAGAACGTGT+TGG | - | chr1_3:67331022-67331041 | Msa0135660:CDS | 55.0% | |
| CGTACCAACACGTTCTCCCT+TGG | + | chr1_3:67331029-67331048 | None:intergenic | 55.0% | |
| TTGGTCTCCCACCACTCATC+AGG | + | chr1_3:67331239-67331258 | None:intergenic | 55.0% | |
| CACTTGGGCACCATCATGTG+GGG | - | chr1_3:67331446-67331465 | Msa0135660:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | - | chr1_3:67331510-67331529 | Msa0135660:intron | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | - | chr1_3:67331516-67331535 | Msa0135660:intron | 55.0% | |
| AGAAGGATCTGGCGATAGCG+AGG | - | chr1_3:67331527-67331546 | Msa0135660:intron | 55.0% | |
| CGTTCTCGCAATGATGCTGC+AGG | - | chr1_3:67331732-67331751 | Msa0135660:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | - | chr1_3:67331776-67331795 | Msa0135660:CDS | 55.0% | |
| GGTTCCTCCTCACCTAGTGA+TGG | - | chr1_3:67330929-67330948 | Msa0135660:CDS | 55.0% | |
| TCCTCCTCACCTAGTGATGG+GGG | - | chr1_3:67330932-67330951 | Msa0135660:CDS | 55.0% | |
| ! | GTTTTCTGCCCCCCATCACT+AGG | + | chr1_3:67330944-67330963 | None:intergenic | 55.0% |
| GTCTCCAAGGGAGAACGTGT+TGG | - | chr1_3:67331022-67331041 | Msa0135660:CDS | 55.0% | |
| CGTACCAACACGTTCTCCCT+TGG | + | chr1_3:67331029-67331048 | None:intergenic | 55.0% | |
| TTGGTCTCCCACCACTCATC+AGG | + | chr1_3:67331239-67331258 | None:intergenic | 55.0% | |
| CACTTGGGCACCATCATGTG+GGG | - | chr1_3:67331446-67331465 | Msa0135660:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | - | chr1_3:67331510-67331529 | Msa0135660:intron | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | - | chr1_3:67331516-67331535 | Msa0135660:intron | 55.0% | |
| AGAAGGATCTGGCGATAGCG+AGG | - | chr1_3:67331527-67331546 | Msa0135660:intron | 55.0% | |
| CGTTCTCGCAATGATGCTGC+AGG | - | chr1_3:67331732-67331751 | Msa0135660:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | - | chr1_3:67331776-67331795 | Msa0135660:CDS | 55.0% | |
| ! | CCTCCTCACCTAGTGATGGG+GGG | - | chr1_3:67330933-67330952 | Msa0135660:CDS | 60.0% |
| ! | CCTCCTCACCTAGTGATGGG+GGG | - | chr1_3:67330933-67330952 | Msa0135660:CDS | 60.0% |
| CCCCCCATCACTAGGTGAGG+AGG | + | chr1_3:67330936-67330955 | None:intergenic | 65.0% | |
| CTGCCCCCCATCACTAGGTG+AGG | + | chr1_3:67330939-67330958 | None:intergenic | 65.0% | |
| CCCCCCATCACTAGGTGAGG+AGG | + | chr1_3:67330936-67330955 | None:intergenic | 65.0% | |
| CTGCCCCCCATCACTAGGTG+AGG | + | chr1_3:67330939-67330958 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 67330901 | 67331965 | 67330901 | ID=Msa0135660;Name=Msa0135660 |
| chr1_3 | mRNA | 67330901 | 67331965 | 67330901 | ID=Msa0135660-mRNA-1;Parent=Msa0135660;Name=Msa0135660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1|0|0|1|0|0|3|0|307 |
| chr1_3 | exon | 67331823 | 67331965 | 67331823 | ID=Msa0135660-mRNA-1:exon:23132;Parent=Msa0135660-mRNA-1 |
| chr1_3 | exon | 67331637 | 67331800 | 67331637 | ID=Msa0135660-mRNA-1:exon:23131;Parent=Msa0135660-mRNA-1 |
| chr1_3 | exon | 67330901 | 67331515 | 67330901 | ID=Msa0135660-mRNA-1:exon:23130;Parent=Msa0135660-mRNA-1 |
| chr1_3 | five_prime_UTR | 67331965 | 67331965 | 67331965 | ID=Msa0135660-mRNA-1:five_prime_utr;Parent=Msa0135660-mRNA-1 |
| chr1_3 | CDS | 67331823 | 67331964 | 67331823 | ID=Msa0135660-mRNA-1:cds;Parent=Msa0135660-mRNA-1 |
| chr1_3 | CDS | 67331637 | 67331800 | 67331637 | ID=Msa0135660-mRNA-1:cds;Parent=Msa0135660-mRNA-1 |
| chr1_3 | CDS | 67330901 | 67331515 | 67330901 | ID=Msa0135660-mRNA-1:cds;Parent=Msa0135660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
