Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526650 | XP_003591009.1 | 99.435 | 354 | 2 | 0 | 1 | 354 | 1 | 354 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526650 | sp|Q9ASU8|NDL2_ARATH | 63.143 | 350 | 121 | 2 | 1 | 350 | 1 | 342 | 6.68e-166 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526650 | G7I6W5 | 99.435 | 354 | 2 | 0 | 1 | 354 | 1 | 354 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138090 | Msa0526650 | 0.823095 | 1.665467e-53 | -8.615850e-47 |
| Msa0172320 | Msa0526650 | 0.991357 | 3.184338e-187 | -8.615850e-47 |
| Msa0191890 | Msa0526650 | 0.803191 | 3.922260e-49 | -8.615850e-47 |
| Msa0230370 | Msa0526650 | 0.818320 | 2.084335e-52 | -8.615850e-47 |
| Msa0429980 | Msa0526650 | 0.879621 | 1.073110e-69 | -8.615850e-47 |
| Msa0312530 | Msa0526650 | 0.817184 | 3.761103e-52 | -8.615850e-47 |
| Msa0500640 | Msa0526650 | 0.869742 | 2.465377e-66 | -8.615850e-47 |
| Msa0500660 | Msa0526650 | 0.889651 | 2.000767e-73 | -8.615850e-47 |
| Msa0526650 | Msa0526760 | 0.986562 | 3.329431e-167 | -8.615850e-47 |
| Msa0526650 | Msa0527130 | 0.886594 | 2.986803e-72 | -8.615850e-47 |
| Msa0526650 | Msa0897630 | 0.830308 | 3.158877e-55 | -8.615850e-47 |
| Msa0526650 | Msa0924280 | 0.821378 | 4.168148e-53 | -8.615850e-47 |
| Msa0526650 | Msa1390250 | 0.984186 | 7.815096e-160 | -8.615850e-47 |
| Msa0526650 | Msa1401270 | 0.802623 | 5.139166e-49 | -8.615850e-47 |
| Msa0526650 | Msa1422020 | 0.859887 | 3.029908e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526650 | MtrunA17_Chr1g0190891 | 99.435 | 354 | 2 | 0 | 1 | 354 | 1 | 354 | 0.0 | 727 |
| Msa0526650 | MtrunA17_Chr8g0389281 | 65.537 | 354 | 115 | 1 | 1 | 354 | 1 | 347 | 6.35e-176 | 492 |
| Msa0526650 | MtrunA17_Chr1g0151691 | 66.066 | 333 | 106 | 1 | 21 | 353 | 2 | 327 | 7.92e-169 | 473 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526650 | AT5G11790.1 | 63.143 | 350 | 121 | 2 | 1 | 350 | 1 | 342 | 6.79e-167 | 469 |
| Msa0526650 | AT5G56750.1 | 62.286 | 350 | 125 | 1 | 1 | 350 | 1 | 343 | 6.22e-166 | 467 |
| Msa0526650 | AT2G19620.1 | 62.000 | 350 | 126 | 1 | 1 | 350 | 1 | 343 | 7.60e-160 | 451 |
| Msa0526650 | AT5G56750.2 | 63.303 | 327 | 113 | 1 | 24 | 350 | 5 | 324 | 1.06e-158 | 448 |
| Msa0526650 | AT2G19620.2 | 63.303 | 327 | 113 | 1 | 24 | 350 | 5 | 324 | 1.11e-154 | 437 |
| Msa0526650 | AT5G11790.2 | 63.605 | 294 | 99 | 2 | 57 | 350 | 3 | 288 | 9.93e-140 | 398 |
| Msa0526650 | AT2G19620.3 | 61.486 | 296 | 107 | 1 | 55 | 350 | 1 | 289 | 2.66e-135 | 387 |
Find 80 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGTGCTTGATTATTTC+GGG | 0.193671 | 3_4:+80635224 | Msa0526650:CDS |
| TGCAGATGTGTCTTGTTTCC+AGG | 0.235016 | 3_4:+80634301 | Msa0526650:intron |
| ATGAACTTGTTGTATTTCTA+TGG | 0.259747 | 3_4:+80635967 | Msa0526650:CDS |
| GCAGAAGTGCTTGATTATTT+CGG | 0.270404 | 3_4:+80635223 | Msa0526650:CDS |
| TGACATTGATTTGATACCTT+TGG | 0.276877 | 3_4:+80633915 | Msa0526650:CDS |
| CATGAAGGTCCTTTACAAAT+TGG | 0.278978 | 3_4:-80635647 | None:intergenic |
| CTCTCTTGGGAGAGGAGTTC+TGG | 0.294714 | 3_4:-80638044 | None:intergenic |
| ATTGGTACGATCATGGAAAT+TGG | 0.314818 | 3_4:-80637912 | None:intergenic |
| AGCATCAAAGAAGCTGCTTC+TGG | 0.321149 | 3_4:-80634338 | None:intergenic |
| GACATTGATTTGATACCTTT+GGG | 0.325512 | 3_4:+80633916 | Msa0526650:CDS |
| CTTAATTCCTAAACTCTCTT+GGG | 0.387702 | 3_4:-80638057 | None:intergenic |
| GCTTAATTCCTAAACTCTCT+TGG | 0.388514 | 3_4:-80638058 | None:intergenic |
| AAATGAAGCTGTGATCATTA+AGG | 0.393675 | 3_4:-80638125 | None:intergenic |
| GCATGGCGAGAAGGGCTTGC+TGG | 0.397270 | 3_4:-80638011 | None:intergenic |
| ACACGAACACGGGTTCTGAT+AGG | 0.401499 | 3_4:-80638086 | None:intergenic |
| CTCCTCTCCCAAGAGAGTTT+AGG | 0.402745 | 3_4:+80638050 | Msa0526650:CDS |
| TGCAAGACACTAATATTTGC+AGG | 0.409158 | 3_4:+80637684 | Msa0526650:CDS |
| CAATTTGTAAAGGACCTTCA+TGG | 0.410762 | 3_4:+80635648 | Msa0526650:CDS |
| ATTTATCACATTGATGCTCC+TGG | 0.412043 | 3_4:+80634374 | Msa0526650:CDS |
| TAGATAGATTCAGCATGAAA+TGG | 0.422812 | 3_4:-80637717 | None:intergenic |
| TGATCATTAAGGACTTGGTT+AGG | 0.437964 | 3_4:-80638114 | None:intergenic |
| TTACAATTAAGAGCCACATC+TGG | 0.442890 | 3_4:-80634119 | None:intergenic |
| GCAGATGTGTCTTGTTTCCA+GGG | 0.443576 | 3_4:+80634302 | Msa0526650:intron |
| AGCTGTGATCATTAAGGACT+TGG | 0.448574 | 3_4:-80638119 | None:intergenic |
| TCTGTTTCAGTGCTTATTTG+TGG | 0.452384 | 3_4:+80634065 | Msa0526650:CDS |
| TGTGGATGACCTAGCTGATC+AGG | 0.452943 | 3_4:+80635198 | Msa0526650:CDS |
| GTTAAGAGAGGTTATGTGCT+TGG | 0.453832 | 3_4:+80635457 | Msa0526650:CDS |
| GGAGCTTAGATGCAGTATCC+AGG | 0.455363 | 3_4:+80636120 | Msa0526650:intron |
| TTAAGAGAGGTTATGTGCTT+GGG | 0.469054 | 3_4:+80635458 | Msa0526650:CDS |
| CTTGTTTCACCAATTTGTAA+AGG | 0.476968 | 3_4:+80635638 | Msa0526650:CDS |
| GCGCTCAATTGGTACGATCA+TGG | 0.485074 | 3_4:-80637919 | None:intergenic |
| CCACGATTGCATGGCGAGAA+GGG | 0.491021 | 3_4:-80638019 | None:intergenic |
| AAATACAAAGAACGAGTGCT+TGG | 0.495399 | 3_4:+80635608 | Msa0526650:CDS |
| AGGTATCAAATCAATGTCAA+TGG | 0.496519 | 3_4:-80633911 | None:intergenic |
| CTTGCAGCGTTACTTCAGTA+AGG | 0.500056 | 3_4:+80636017 | Msa0526650:CDS |
| CTTGGTCAGGTTCAAGCTTG+TGG | 0.502124 | 3_4:+80637867 | Msa0526650:intron |
| GCCACGATTGCATGGCGAGA+AGG | 0.505755 | 3_4:-80638020 | None:intergenic |
| GGTTCAAGCTTGTGGCTCAC+TGG | 0.506474 | 3_4:+80637875 | Msa0526650:intron |
| TTACATCTGATTCTGCTCCC+TGG | 0.507167 | 3_4:-80636138 | None:intergenic |
| AAGGACCTTCATGGACTGAA+TGG | 0.512140 | 3_4:+80635657 | Msa0526650:CDS |
| TCTGGGTAAGTTATCAAAGC+AGG | 0.519292 | 3_4:-80634101 | None:intergenic |
| TTCCTAAACTCTCTTGGGAG+AGG | 0.520626 | 3_4:-80638052 | None:intergenic |
| CAAAATCTGCGCACTTGTTG+AGG | 0.524123 | 3_4:+80637761 | Msa0526650:CDS |
| CCCTTCTCGCCATGCAATCG+TGG | 0.524703 | 3_4:+80638019 | Msa0526650:CDS |
| TTTGATACCTTTGGGAGGAA+AGG | 0.528303 | 3_4:+80633924 | Msa0526650:CDS |
| AATTACAGCTTCTGGATGAA+AGG | 0.538316 | 3_4:+80636265 | Msa0526650:intron |
| AGTTCTTTAGTCCCTCACTT+AGG | 0.542267 | 3_4:-80637656 | None:intergenic |
| TTGATTACCTTTCCTCCCAA+AGG | 0.543228 | 3_4:-80633931 | None:intergenic |
| TTTATCACATTGATGCTCCT+GGG | 0.554973 | 3_4:+80634375 | Msa0526650:CDS |
| TACAATTAAGAGCCACATCT+GGG | 0.555273 | 3_4:-80634118 | None:intergenic |
| GAGCTTAGATGCAGTATCCA+GGG | 0.559037 | 3_4:+80636121 | Msa0526650:CDS |
| GTTCTGGTGCCACGATTGCA+TGG | 0.561235 | 3_4:-80638028 | None:intergenic |
| ATGTGCTTGGGAGTAACAGC+TGG | 0.567699 | 3_4:+80635470 | Msa0526650:CDS |
| GCGACACCGACCTCATGCCC+AGG | 0.569830 | 3_4:-80634392 | None:intergenic |
| AGATGAACCACTGCTTTGTG+TGG | 0.572998 | 3_4:+80635180 | Msa0526650:CDS |
| GTTAGGTTTCAACACGAACA+CGG | 0.579506 | 3_4:-80638097 | None:intergenic |
| CATTGATGCTCCTGGGCATG+AGG | 0.583175 | 3_4:+80634382 | Msa0526650:CDS |
| TGGTATGTGCGGTTTACTGA+AGG | 0.589171 | 3_4:+80635987 | Msa0526650:CDS |
| CTGGACAGAACAACAGACCC+TGG | 0.592111 | 3_4:-80634319 | None:intergenic |
| GACTGAATGGATTTACAACA+AGG | 0.594140 | 3_4:+80635670 | Msa0526650:CDS |
| TGTATAGTGAAAACAAGCAA+AGG | 0.596635 | 3_4:+80634041 | Msa0526650:CDS |
| TTTGATAACTTACCCAGATG+TGG | 0.603486 | 3_4:+80634106 | Msa0526650:CDS |
| TTAGGTTTCAACACGAACAC+GGG | 0.605369 | 3_4:-80638096 | None:intergenic |
| TAAATCCATTCAGTCCATGA+AGG | 0.607975 | 3_4:-80635662 | None:intergenic |
| TACTGAAGTAACGCTGCAAG+AGG | 0.611186 | 3_4:-80636014 | None:intergenic |
| TTTGCTTCCTCATCAAGCAA+CGG | 0.611961 | 3_4:+80637978 | Msa0526650:CDS |
| ATCACAGCTTCATTTCAGCA+TGG | 0.616542 | 3_4:+80638133 | Msa0526650:three_prime_UTR |
| ATGTACAACATCAATAGTGT+AGG | 0.623099 | 3_4:+80638212 | Msa0526650:three_prime_UTR |
| CAGAAGGCACGACCTAAGTG+AGG | 0.629716 | 3_4:+80637644 | Msa0526650:intron |
| GTCTTGAATCAGGTTAAGAG+AGG | 0.630482 | 3_4:+80635445 | Msa0526650:intron |
| TTGTATTTCTATGGTATGTG+CGG | 0.632844 | 3_4:+80635976 | Msa0526650:CDS |
| CTATATATATTTATGTGCAG+TGG | 0.634945 | 3_4:-80638175 | None:intergenic |
| AAGCAAAATGTGGTTGTCTG+TGG | 0.639448 | 3_4:-80637962 | None:intergenic |
| TGTTGAACCGTTGCTTGATG+AGG | 0.639451 | 3_4:-80637985 | None:intergenic |
| CTTCTGCAACCTGATCAGCT+AGG | 0.641514 | 3_4:-80635207 | None:intergenic |
| CTTGATGAGGAAGCAAAATG+TGG | 0.649236 | 3_4:-80637972 | None:intergenic |
| ATTGATTTGATACCTTTGGG+AGG | 0.653147 | 3_4:+80633919 | Msa0526650:CDS |
| AGGTCATCCACACAAAGCAG+TGG | 0.683057 | 3_4:-80635187 | None:intergenic |
| AACTTACAGAAAATAGTGTG+AGG | 0.689418 | 3_4:-80635502 | None:intergenic |
| AGAAGGCACGACCTAAGTGA+GGG | 0.696572 | 3_4:+80637645 | Msa0526650:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCATTTTTAATGAATA+TGG | - | chr3_4:80637803-80637822 | None:intergenic | 10.0% |
| !!! | TAATCATTTATGTTTTTGTT+TGG | + | chr3_4:80634005-80634024 | Msa0526650:intron | 15.0% |
| !!! | ATCTATTTCTTTATTCTTTA+TGG | - | chr3_4:80635047-80635066 | None:intergenic | 15.0% |
| !! | AAAAGAGTTTATTATACTTT+AGG | - | chr3_4:80635112-80635131 | None:intergenic | 15.0% |
| !!! | GATATTTTTTGTTTTTGTAA+AGG | + | chr3_4:80636499-80636518 | Msa0526650:intron | 15.0% |
| !! | TTATATATTAAAGTTTGGTT+TGG | - | chr3_4:80636792-80636811 | None:intergenic | 15.0% |
| !! | GCTATTACAAACATATTTAT+TGG | + | chr3_4:80634215-80634234 | Msa0526650:intron | 20.0% |
| !! | AACTTAAATATGTGAATCAT+AGG | - | chr3_4:80635072-80635091 | None:intergenic | 20.0% |
| !!! | AGTTTATTATACTTTAGGAT+TGG | - | chr3_4:80635107-80635126 | None:intergenic | 20.0% |
| !!! | TTTTTAGATAAATTGAACCA+AGG | + | chr3_4:80635309-80635328 | Msa0526650:intron | 20.0% |
| !!! | CATTATTATTTTCCATAATC+TGG | - | chr3_4:80635745-80635764 | None:intergenic | 20.0% |
| !! | TATGTAGATAGAATCATTTA+TGG | + | chr3_4:80636066-80636085 | Msa0526650:intron | 20.0% |
| !! | ATATAGTTATACATACTCTT+CGG | - | chr3_4:80636174-80636193 | None:intergenic | 20.0% |
| !!! | GAGTATGTATAACTATATTT+TGG | + | chr3_4:80636176-80636195 | Msa0526650:intron | 20.0% |
| !!! | TTGTTTTTGTTTTGTTTTCT+CGG | + | chr3_4:80636360-80636379 | Msa0526650:intron | 20.0% |
| !! | GCTAGTTATATATTAAAGTT+TGG | - | chr3_4:80636797-80636816 | None:intergenic | 20.0% |
| !!! | CATAGATGATTTTTGTTTTA+TGG | + | chr3_4:80637430-80637449 | Msa0526650:intron | 20.0% |
| !!! | TTTAAAGTAATTATCCTACT+TGG | - | chr3_4:80637550-80637569 | None:intergenic | 20.0% |
| !!! | TCATTTATGTTTTTGTTTGG+AGG | + | chr3_4:80634008-80634027 | Msa0526650:intron | 25.0% |
| ! | ATGTTTGTAATAGCAAAATC+TGG | - | chr3_4:80634209-80634228 | None:intergenic | 25.0% |
| ! | TAAACTAATACTAGGAAGAA+TGG | - | chr3_4:80634417-80634436 | None:intergenic | 25.0% |
| ! | AAGGTTAGTAAACTAATACT+AGG | - | chr3_4:80634425-80634444 | None:intergenic | 25.0% |
| ! | AAACTATCCTAGAAACATAA+TGG | + | chr3_4:80634456-80634475 | Msa0526650:intron | 25.0% |
| ! | CTTATTTCCATTATGTTTCT+AGG | - | chr3_4:80634466-80634485 | None:intergenic | 25.0% |
| !! | GTTCATATCAATGTTTTACT+TGG | + | chr3_4:80634616-80634635 | Msa0526650:intron | 25.0% |
| !! | ATTGAGTTGTTTATTCAAAC+AGG | - | chr3_4:80634714-80634733 | None:intergenic | 25.0% |
| ! | GAATAAACAACTCAATTAAG+TGG | + | chr3_4:80634718-80634737 | Msa0526650:intron | 25.0% |
| ! | ACATGATTCACTTCAATTTA+GGG | - | chr3_4:80634954-80634973 | None:intergenic | 25.0% |
| !!! | ATTATGTACTCATTTTTCCT+TGG | - | chr3_4:80635329-80635348 | None:intergenic | 25.0% |
| ! | TTGATACTCTTACTTTGATT+AGG | + | chr3_4:80635400-80635419 | Msa0526650:intron | 25.0% |
| !! | TTCAAGACATTTTTGTATGA+AGG | - | chr3_4:80635433-80635452 | None:intergenic | 25.0% |
| ! | ATACAAAAATGTCTTGAATC+AGG | + | chr3_4:80635435-80635454 | Msa0526650:intron | 25.0% |
| !! | TATGATAAAAGCATGAAAGT+GGG | - | chr3_4:80635703-80635722 | None:intergenic | 25.0% |
| !! | ATATGATAAAAGCATGAAAG+TGG | - | chr3_4:80635704-80635723 | None:intergenic | 25.0% |
| ! | TACTCAAACACATGATAAAT+AGG | - | chr3_4:80635790-80635809 | None:intergenic | 25.0% |
| !!! | ATGAACTTGTTGTATTTCTA+TGG | + | chr3_4:80635967-80635986 | Msa0526650:CDS | 25.0% |
| ! | TAGTGTACAATTATGACTAA+TGG | + | chr3_4:80636223-80636242 | Msa0526650:intron | 25.0% |
| ! | GTAATTATAGATCAGAAAAG+AGG | - | chr3_4:80636251-80636270 | None:intergenic | 25.0% |
| !! | CATCAATAATAACAGGTTTT+AGG | - | chr3_4:80636453-80636472 | None:intergenic | 25.0% |
| ! | AGGTTATCATCAATAATAAC+AGG | - | chr3_4:80636460-80636479 | None:intergenic | 25.0% |
| !!! | CTGTGCTTGATTATTTTTAA+TGG | - | chr3_4:80636537-80636556 | None:intergenic | 25.0% |
| !!! | ATATTAAAGTTTGGTTTGGA+AGG | - | chr3_4:80636788-80636807 | None:intergenic | 25.0% |
| ! | AATATATAACTAGCATAACC+AGG | + | chr3_4:80636803-80636822 | Msa0526650:intron | 25.0% |
| !!! | AATAGTTTTGGTGTAGAATT+TGG | - | chr3_4:80636968-80636987 | None:intergenic | 25.0% |
| ! | CTAAAAAGATGCAATTGTAA+TGG | - | chr3_4:80637032-80637051 | None:intergenic | 25.0% |
| !! | TGCATTAAATCTTGATTTTG+AGG | - | chr3_4:80637104-80637123 | None:intergenic | 25.0% |
| ! | TATTAGTGAGGAATAAGATA+GGG | - | chr3_4:80637192-80637211 | None:intergenic | 25.0% |
| !! | TTTAAGTGCTGTCATATATT+GGG | - | chr3_4:80637222-80637241 | None:intergenic | 25.0% |
| ! | TTAAATTAACTTCGAGGAAT+TGG | - | chr3_4:80637265-80637284 | None:intergenic | 25.0% |
| ! | AACAGATTAAATTAACTTCG+AGG | - | chr3_4:80637271-80637290 | None:intergenic | 25.0% |
| !! | CATTGTGATTTCTACAATTT+TGG | - | chr3_4:80637294-80637313 | None:intergenic | 25.0% |
| !!! | GGATAATTACTTTAAAATGC+TGG | + | chr3_4:80637554-80637573 | Msa0526650:intron | 25.0% |
| !!! | AGCATTTTGGTAATTAATCA+TGG | - | chr3_4:80637614-80637633 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACAACACATACT+TGG | + | chr3_4:80637849-80637868 | Msa0526650:intron | 25.0% |
| ! | CTATATATATTTATGTGCAG+TGG | - | chr3_4:80638178-80638197 | None:intergenic | 25.0% |
| !!! | TCTACTTTTTTTACATTGAC+AGG | - | chr3_4:80638281-80638300 | None:intergenic | 25.0% |
| AGGTATCAAATCAATGTCAA+TGG | - | chr3_4:80633914-80633933 | None:intergenic | 30.0% | |
| !! | TGACATTGATTTGATACCTT+TGG | + | chr3_4:80633915-80633934 | Msa0526650:CDS | 30.0% |
| !! | GACATTGATTTGATACCTTT+GGG | + | chr3_4:80633916-80633935 | Msa0526650:CDS | 30.0% |
| TGTATAGTGAAAACAAGCAA+AGG | + | chr3_4:80634041-80634060 | Msa0526650:CDS | 30.0% | |
| AATGGAAATAAGTCGAAAAC+AGG | + | chr3_4:80634474-80634493 | Msa0526650:intron | 30.0% | |
| GTTAGTGTAGTTAATAGTCT+AGG | + | chr3_4:80634559-80634578 | Msa0526650:intron | 30.0% | |
| ! | ATCAATGTTTTACTTGGAGA+AGG | + | chr3_4:80634622-80634641 | Msa0526650:intron | 30.0% |
| TATGGAAATAAGCTGAAAAC+AGG | + | chr3_4:80634825-80634844 | Msa0526650:intron | 30.0% | |
| ACGTATTTGAGCTTATTTAC+TGG | - | chr3_4:80634914-80634933 | None:intergenic | 30.0% | |
| GACATGATTCACTTCAATTT+AGG | - | chr3_4:80634955-80634974 | None:intergenic | 30.0% | |
| AAAGAAAAGGGACATAGAAT+AGG | - | chr3_4:80634997-80635016 | None:intergenic | 30.0% | |
| AACCCTCTATAGAAAGAAAA+GGG | - | chr3_4:80635009-80635028 | None:intergenic | 30.0% | |
| GTTTAAGAGATATTGCAGTT+AGG | + | chr3_4:80635139-80635158 | Msa0526650:intron | 30.0% | |
| ! | TACTTGTTACTATGTAGCAT+CGG | - | chr3_4:80635272-80635291 | None:intergenic | 30.0% |
| AACTTACAGAAAATAGTGTG+AGG | - | chr3_4:80635505-80635524 | None:intergenic | 30.0% | |
| ATGACGAAAAATTAACACGA+TGG | - | chr3_4:80635578-80635597 | None:intergenic | 30.0% | |
| CTTGTTTCACCAATTTGTAA+AGG | + | chr3_4:80635638-80635657 | Msa0526650:CDS | 30.0% | |
| ! | ATGATAAAAGCATGAAAGTG+GGG | - | chr3_4:80635702-80635721 | None:intergenic | 30.0% |
| TAATAATGCATAGTCTGACA+CGG | + | chr3_4:80635757-80635776 | Msa0526650:intron | 30.0% | |
| ! | TTGTATTTCTATGGTATGTG+CGG | + | chr3_4:80635976-80635995 | Msa0526650:CDS | 30.0% |
| TATTCTTCTCATTCTTCAAC+AGG | + | chr3_4:80636040-80636059 | Msa0526650:intron | 30.0% | |
| GTAGATAGAATCATTTATGG+AGG | + | chr3_4:80636069-80636088 | Msa0526650:intron | 30.0% | |
| ACTTCTCTTCAACTTTGAAT+AGG | + | chr3_4:80636099-80636118 | Msa0526650:intron | 30.0% | |
| TGATCTATAATTACAGCTTC+TGG | + | chr3_4:80636257-80636276 | Msa0526650:intron | 30.0% | |
| ! | GATGAATTTTCAAAGCTTGA+GGG | - | chr3_4:80636399-80636418 | None:intergenic | 30.0% |
| ! | AGATGAATTTTCAAAGCTTG+AGG | - | chr3_4:80636400-80636419 | None:intergenic | 30.0% |
| CAAATGTCTCGAGAATATTT+AGG | - | chr3_4:80636480-80636499 | None:intergenic | 30.0% | |
| ! | TGTTTTCTTTAAGCAAACGT+TGG | - | chr3_4:80636589-80636608 | None:intergenic | 30.0% |
| AGATATTGACAGTGATGATT+GGG | - | chr3_4:80636679-80636698 | None:intergenic | 30.0% | |
| !! | TTCTTTGGAGTTGTTTAGAA+AGG | - | chr3_4:80636747-80636766 | None:intergenic | 30.0% |
| !! | CAGTCAAATTTGTTGTTCTT+TGG | - | chr3_4:80636762-80636781 | None:intergenic | 30.0% |
| GAATACCTCATCTTAAGATT+TGG | - | chr3_4:80636865-80636884 | None:intergenic | 30.0% | |
| AGGATGAAACATTTATACAG+AGG | - | chr3_4:80637169-80637188 | None:intergenic | 30.0% | |
| GTATTAGTGAGGAATAAGAT+AGG | - | chr3_4:80637193-80637212 | None:intergenic | 30.0% | |
| ! | GTTTAAGTGCTGTCATATAT+TGG | - | chr3_4:80637223-80637242 | None:intergenic | 30.0% |
| TAAACCATTGTGATTTCTGA+AGG | - | chr3_4:80637335-80637354 | None:intergenic | 30.0% | |
| !!! | CTATGAACTTGTTGGATTTT+GGG | + | chr3_4:80637476-80637495 | Msa0526650:intron | 30.0% |
| TAGATAGATTCAGCATGAAA+TGG | - | chr3_4:80637720-80637739 | None:intergenic | 30.0% | |
| CTTAATTCCTAAACTCTCTT+GGG | - | chr3_4:80638060-80638079 | None:intergenic | 30.0% | |
| AAATGAAGCTGTGATCATTA+AGG | - | chr3_4:80638128-80638147 | None:intergenic | 30.0% | |
| ATGTACAACATCAATAGTGT+AGG | + | chr3_4:80638212-80638231 | Msa0526650:three_prime_UTR | 30.0% | |
| !! | ATTGATTTGATACCTTTGGG+AGG | + | chr3_4:80633919-80633938 | Msa0526650:CDS | 35.0% |
| TCTGTTTCAGTGCTTATTTG+TGG | + | chr3_4:80634065-80634084 | Msa0526650:CDS | 35.0% | |
| ! | TTTGATAACTTACCCAGATG+TGG | + | chr3_4:80634106-80634125 | Msa0526650:CDS | 35.0% |
| TACAATTAAGAGCCACATCT+GGG | - | chr3_4:80634121-80634140 | None:intergenic | 35.0% | |
| TTACAATTAAGAGCCACATC+TGG | - | chr3_4:80634122-80634141 | None:intergenic | 35.0% | |
| ATTTATCACATTGATGCTCC+TGG | + | chr3_4:80634374-80634393 | Msa0526650:CDS | 35.0% | |
| TTTATCACATTGATGCTCCT+GGG | + | chr3_4:80634375-80634394 | Msa0526650:CDS | 35.0% | |
| GATAGTTTATGAAAGCAGGA+AGG | - | chr3_4:80634444-80634463 | None:intergenic | 35.0% | |
| CTAGGATAGTTTATGAAAGC+AGG | - | chr3_4:80634448-80634467 | None:intergenic | 35.0% | |
| AATAAGTCGAAAACAGGCTA+TGG | + | chr3_4:80634480-80634499 | Msa0526650:intron | 35.0% | |
| TACACTAACTGATACCATTG+AGG | - | chr3_4:80634548-80634567 | None:intergenic | 35.0% | |
| AAACTATCCTAGAGAGCTTA+TGG | + | chr3_4:80634807-80634826 | Msa0526650:intron | 35.0% | |
| CTTATTTCCATAAGCTCTCT+AGG | - | chr3_4:80634817-80634836 | None:intergenic | 35.0% | |
| ATAAGCTGAAAACAGGCTAT+AGG | + | chr3_4:80634832-80634851 | Msa0526650:intron | 35.0% | |
| ! | ACTTCAATTTAGGGCTTGTT+TGG | - | chr3_4:80634945-80634964 | None:intergenic | 35.0% |
| ! | TGTCCCTTTTCTTTCTATAG+AGG | + | chr3_4:80635003-80635022 | Msa0526650:intron | 35.0% |
| ! | GTCCCTTTTCTTTCTATAGA+GGG | + | chr3_4:80635004-80635023 | Msa0526650:intron | 35.0% |
| CAACCCTCTATAGAAAGAAA+AGG | - | chr3_4:80635010-80635029 | None:intergenic | 35.0% | |
| TTTCTTTCTATAGAGGGTTG+AGG | + | chr3_4:80635010-80635029 | Msa0526650:intron | 35.0% | |
| !! | GCAGAAGTGCTTGATTATTT+CGG | + | chr3_4:80635223-80635242 | Msa0526650:CDS | 35.0% |
| !! | CAGAAGTGCTTGATTATTTC+GGG | + | chr3_4:80635224-80635243 | Msa0526650:CDS | 35.0% |
| TTAAGAGAGGTTATGTGCTT+GGG | + | chr3_4:80635458-80635477 | Msa0526650:CDS | 35.0% | |
| AAATACAAAGAACGAGTGCT+TGG | + | chr3_4:80635608-80635627 | Msa0526650:CDS | 35.0% | |
| CATGAAGGTCCTTTACAAAT+TGG | - | chr3_4:80635650-80635669 | None:intergenic | 35.0% | |
| CAATTTGTAAAGGACCTTCA+TGG | + | chr3_4:80635648-80635667 | Msa0526650:CDS | 35.0% | |
| TAAATCCATTCAGTCCATGA+AGG | - | chr3_4:80635665-80635684 | None:intergenic | 35.0% | |
| ! | GACTGAATGGATTTACAACA+AGG | + | chr3_4:80635670-80635689 | Msa0526650:CDS | 35.0% |
| CTATTGCAACAACCAGATTA+TGG | + | chr3_4:80635730-80635749 | Msa0526650:intron | 35.0% | |
| AATCACAGGCGTTTATAATG+CGG | - | chr3_4:80635840-80635859 | None:intergenic | 35.0% | |
| ! | AAGAGTGTGTTTAGAATCAC+AGG | - | chr3_4:80635854-80635873 | None:intergenic | 35.0% |
| TGTAAACATTCTGCTTCAAG+AGG | - | chr3_4:80635921-80635940 | None:intergenic | 35.0% | |
| TCTTGAAGCAGAATGTTTAC+AGG | + | chr3_4:80635920-80635939 | Msa0526650:intron | 35.0% | |
| AATTACAGCTTCTGGATGAA+AGG | + | chr3_4:80636265-80636284 | Msa0526650:intron | 35.0% | |
| ! | CTAAGTGCTTTAAGCTAGTT+TGG | - | chr3_4:80636636-80636655 | None:intergenic | 35.0% |
| CAGATATTGACAGTGATGAT+TGG | - | chr3_4:80636680-80636699 | None:intergenic | 35.0% | |
| ! | CAATATCTGCAGAATTTTGC+AGG | + | chr3_4:80636691-80636710 | Msa0526650:intron | 35.0% |
| TACCTCATCTTAAGATTTGG+TGG | - | chr3_4:80636862-80636881 | None:intergenic | 35.0% | |
| AAAATTCCCACCTTCAATGA+TGG | + | chr3_4:80636895-80636914 | Msa0526650:intron | 35.0% | |
| ! | GTTTTCTATGCCATCATTGA+AGG | - | chr3_4:80636908-80636927 | None:intergenic | 35.0% |
| !! | AGTTTTGGTGTAGAATTTGG+TGG | - | chr3_4:80636965-80636984 | None:intergenic | 35.0% |
| !! | GATTTTGAGGATGACATATC+TGG | - | chr3_4:80637091-80637110 | None:intergenic | 35.0% |
| AACTCCTTCAGAAATCACAA+TGG | + | chr3_4:80637328-80637347 | Msa0526650:intron | 35.0% | |
| !! | ATGAACCAAACTTTAGCTTG+TGG | + | chr3_4:80637453-80637472 | Msa0526650:intron | 35.0% |
| !!! | GCTATGAACTTGTTGGATTT+TGG | + | chr3_4:80637475-80637494 | Msa0526650:intron | 35.0% |
| !! | ATTTTGGGTGTGGACTAATA+TGG | + | chr3_4:80637491-80637510 | Msa0526650:intron | 35.0% |
| TGCAAGACACTAATATTTGC+AGG | + | chr3_4:80637684-80637703 | Msa0526650:CDS | 35.0% | |
| !! | GTTGCTATTTGAGTATCTTG+TGG | - | chr3_4:80637826-80637845 | None:intergenic | 35.0% |
| TTTACAACACATACTTGGTC+AGG | + | chr3_4:80637854-80637873 | Msa0526650:intron | 35.0% | |
| ATTGGTACGATCATGGAAAT+TGG | - | chr3_4:80637915-80637934 | None:intergenic | 35.0% | |
| !! | ACCAATTGAGCGCTTTTTAA+TGG | + | chr3_4:80637929-80637948 | Msa0526650:CDS | 35.0% |
| !! | CCAATTGAGCGCTTTTTAAT+GGG | + | chr3_4:80637930-80637949 | Msa0526650:CDS | 35.0% |
| !! | CAATTGAGCGCTTTTTAATG+GGG | + | chr3_4:80637931-80637950 | Msa0526650:CDS | 35.0% |
| GCTTAATTCCTAAACTCTCT+TGG | - | chr3_4:80638061-80638080 | None:intergenic | 35.0% | |
| ! | TGATCATTAAGGACTTGGTT+AGG | - | chr3_4:80638117-80638136 | None:intergenic | 35.0% |
| ! | TTTGATACCTTTGGGAGGAA+AGG | + | chr3_4:80633924-80633943 | Msa0526650:CDS | 40.0% |
| TTGATTACCTTTCCTCCCAA+AGG | - | chr3_4:80633934-80633953 | None:intergenic | 40.0% | |
| !! | GTTTTTGTTTGGAGGTTTGC+AGG | + | chr3_4:80634016-80634035 | Msa0526650:intron | 40.0% |
| TCTGGGTAAGTTATCAAAGC+AGG | - | chr3_4:80634104-80634123 | None:intergenic | 40.0% | |
| TAGTCTAGGCTAGTAGCTAA+TGG | + | chr3_4:80634573-80634592 | Msa0526650:intron | 40.0% | |
| TTCCAGTTTACACCGTGAAA+AGG | + | chr3_4:80634680-80634699 | Msa0526650:intron | 40.0% | |
| ! | ATCCTTTTCACGGTGTAAAC+TGG | - | chr3_4:80634685-80634704 | None:intergenic | 40.0% |
| TTACACCGTGAAAAGGATTG+AGG | + | chr3_4:80634687-80634706 | Msa0526650:intron | 40.0% | |
| TGTCTAATGTCTGCAGACAT+AGG | + | chr3_4:80634971-80634990 | Msa0526650:intron | 40.0% | |
| !! | ACTATGTAGCATCGGTGAAT+AGG | - | chr3_4:80635264-80635283 | None:intergenic | 40.0% |
| GTCTTGAATCAGGTTAAGAG+AGG | + | chr3_4:80635445-80635464 | Msa0526650:intron | 40.0% | |
| GTTAAGAGAGGTTATGTGCT+TGG | + | chr3_4:80635457-80635476 | Msa0526650:CDS | 40.0% | |
| ! | ATAAAAGCATGAAAGTGGGG+AGG | - | chr3_4:80635699-80635718 | None:intergenic | 40.0% |
| ! | CAGGTTTTCTACATTCATGC+AGG | + | chr3_4:80635939-80635958 | Msa0526650:intron | 40.0% |
| ! | GAATTTTCAAAGCTTGAGGG+AGG | - | chr3_4:80636396-80636415 | None:intergenic | 40.0% |
| TGAGCCATTTCACACAACAA+CGG | + | chr3_4:80636419-80636438 | Msa0526650:intron | 40.0% | |
| TACACCGTTGTTGTGTGAAA+TGG | - | chr3_4:80636426-80636445 | None:intergenic | 40.0% | |
| ! | GCAGAATTTTGCAGGAAAAG+AGG | + | chr3_4:80636699-80636718 | Msa0526650:intron | 40.0% |
| TATAACTAGCATAACCAGGC+CGG | + | chr3_4:80636807-80636826 | Msa0526650:intron | 40.0% | |
| TGTATTTGTGAGCTTGACTC+CGG | - | chr3_4:80636829-80636848 | None:intergenic | 40.0% | |
| !! | CTTAAGATTTGGTGGCTGAT+TGG | - | chr3_4:80636854-80636873 | None:intergenic | 40.0% |
| AGCCACCAAATCTTAAGATG+AGG | + | chr3_4:80636857-80636876 | Msa0526650:intron | 40.0% | |
| ! | AGATGAGGTATTCCAACTTG+TGG | + | chr3_4:80636872-80636891 | Msa0526650:intron | 40.0% |
| TCTATGCCATCATTGAAGGT+GGG | - | chr3_4:80636904-80636923 | None:intergenic | 40.0% | |
| TTCTATGCCATCATTGAAGG+TGG | - | chr3_4:80636905-80636924 | None:intergenic | 40.0% | |
| ATATTGCACTAGAGTGTGCA+AGG | - | chr3_4:80636942-80636961 | None:intergenic | 40.0% | |
| ! | GCAGTAGCATGCAATAGTTT+TGG | - | chr3_4:80636980-80636999 | None:intergenic | 40.0% |
| ! | TACAGAGGTATGTTGTGAGA+CGG | - | chr3_4:80637154-80637173 | None:intergenic | 40.0% |
| TAGTGAGGAATAAGATAGGG+AGG | - | chr3_4:80637189-80637208 | None:intergenic | 40.0% | |
| ! | AGGAATTGGTTCATAAGAGG+TGG | - | chr3_4:80637251-80637270 | None:intergenic | 40.0% |
| ! | TCGAGGAATTGGTTCATAAG+AGG | - | chr3_4:80637254-80637273 | None:intergenic | 40.0% |
| CATAGCCACAAGCTAAAGTT+TGG | - | chr3_4:80637461-80637480 | None:intergenic | 40.0% | |
| !!! | AACTTGTTGGATTTTGGGTG+TGG | + | chr3_4:80637481-80637500 | Msa0526650:intron | 40.0% |
| AGTTCTTTAGTCCCTCACTT+AGG | - | chr3_4:80637659-80637678 | None:intergenic | 40.0% | |
| !! | CCCATTAAAAAGCGCTCAAT+TGG | - | chr3_4:80637933-80637952 | None:intergenic | 40.0% |
| AAGCAAAATGTGGTTGTCTG+TGG | - | chr3_4:80637965-80637984 | None:intergenic | 40.0% | |
| CTTGATGAGGAAGCAAAATG+TGG | - | chr3_4:80637975-80637994 | None:intergenic | 40.0% | |
| TTTGCTTCCTCATCAAGCAA+CGG | + | chr3_4:80637978-80637997 | Msa0526650:CDS | 40.0% | |
| TTAGGTTTCAACACGAACAC+GGG | - | chr3_4:80638099-80638118 | None:intergenic | 40.0% | |
| GTTAGGTTTCAACACGAACA+CGG | - | chr3_4:80638100-80638119 | None:intergenic | 40.0% | |
| AGCTGTGATCATTAAGGACT+TGG | - | chr3_4:80638122-80638141 | None:intergenic | 40.0% | |
| ATCACAGCTTCATTTCAGCA+TGG | + | chr3_4:80638133-80638152 | Msa0526650:three_prime_UTR | 40.0% | |
| !! | TGCAGATGTGTCTTGTTTCC+AGG | + | chr3_4:80634301-80634320 | Msa0526650:intron | 45.0% |
| !! | GCAGATGTGTCTTGTTTCCA+GGG | + | chr3_4:80634302-80634321 | Msa0526650:intron | 45.0% |
| AGCATCAAAGAAGCTGCTTC+TGG | - | chr3_4:80634341-80634360 | None:intergenic | 45.0% | |
| AGTCGAAAACAGGCTATGGA+TGG | + | chr3_4:80634484-80634503 | Msa0526650:intron | 45.0% | |
| ! | CAGGACCTCAATCCTTTTCA+CGG | - | chr3_4:80634695-80634714 | None:intergenic | 45.0% |
| AGATGAACCACTGCTTTGTG+TGG | + | chr3_4:80635180-80635199 | Msa0526650:CDS | 45.0% | |
| ! | AAGGACCTTCATGGACTGAA+TGG | + | chr3_4:80635657-80635676 | Msa0526650:CDS | 45.0% |
| TGGTATGTGCGGTTTACTGA+AGG | + | chr3_4:80635987-80636006 | Msa0526650:CDS | 45.0% | |
| TACTGAAGTAACGCTGCAAG+AGG | - | chr3_4:80636017-80636036 | None:intergenic | 45.0% | |
| CTTGCAGCGTTACTTCAGTA+AGG | + | chr3_4:80636017-80636036 | Msa0526650:CDS | 45.0% | |
| GAGCTTAGATGCAGTATCCA+GGG | + | chr3_4:80636121-80636140 | Msa0526650:CDS | 45.0% | |
| TTACATCTGATTCTGCTCCC+TGG | - | chr3_4:80636141-80636160 | None:intergenic | 45.0% | |
| ! | GGTGGGAATTTTCCACAAGT+TGG | - | chr3_4:80636887-80636906 | None:intergenic | 45.0% |
| AGTGTGCAAGGATGCATCAT+AGG | - | chr3_4:80636930-80636949 | None:intergenic | 45.0% | |
| !! | TCTGGTGTGTTGACTATGTG+TGG | - | chr3_4:80637073-80637092 | None:intergenic | 45.0% |
| TTGGGCACAGTGTATTAGTG+AGG | - | chr3_4:80637204-80637223 | None:intergenic | 45.0% | |
| GCTTGTGGCTATGAACTTGT+TGG | + | chr3_4:80637468-80637487 | Msa0526650:intron | 45.0% | |
| GCGAATGAATACTGCCAAGT+AGG | + | chr3_4:80637533-80637552 | Msa0526650:intron | 45.0% | |
| ! | CTGCAAGCAGTTCAGCATTT+TGG | - | chr3_4:80637627-80637646 | None:intergenic | 45.0% |
| AATGCTGAACTGCTTGCAGA+AGG | + | chr3_4:80637628-80637647 | Msa0526650:intron | 45.0% | |
| ! | CAAAATCTGCGCACTTGTTG+AGG | + | chr3_4:80637761-80637780 | Msa0526650:CDS | 45.0% |
| !! | GAGCGCTTTTTAATGGGGTT+TGG | + | chr3_4:80637936-80637955 | Msa0526650:CDS | 45.0% |
| TGTTGAACCGTTGCTTGATG+AGG | - | chr3_4:80637988-80638007 | None:intergenic | 45.0% | |
| TTCCTAAACTCTCTTGGGAG+AGG | - | chr3_4:80638055-80638074 | None:intergenic | 45.0% | |
| GCTCTCACAAACAGCCTCAA+TGG | + | chr3_4:80634531-80634550 | Msa0526650:intron | 50.0% | |
| AGGTCATCCACACAAAGCAG+TGG | - | chr3_4:80635190-80635209 | None:intergenic | 50.0% | |
| TGTGGATGACCTAGCTGATC+AGG | + | chr3_4:80635198-80635217 | Msa0526650:CDS | 50.0% | |
| CTTCTGCAACCTGATCAGCT+AGG | - | chr3_4:80635210-80635229 | None:intergenic | 50.0% | |
| ATGTGCTTGGGAGTAACAGC+TGG | + | chr3_4:80635470-80635489 | Msa0526650:CDS | 50.0% | |
| GGAGCTTAGATGCAGTATCC+AGG | + | chr3_4:80636120-80636139 | Msa0526650:intron | 50.0% | |
| AAAGCTTGAGGGAGGAGTAG+AGG | - | chr3_4:80636388-80636407 | None:intergenic | 50.0% | |
| TGCTACTGCTGCAACAGACT+TGG | + | chr3_4:80636991-80637010 | Msa0526650:intron | 50.0% | |
| ! | AGAAGGCACGACCTAAGTGA+GGG | + | chr3_4:80637645-80637664 | Msa0526650:intron | 50.0% |
| CTTGGTCAGGTTCAAGCTTG+TGG | + | chr3_4:80637867-80637886 | Msa0526650:intron | 50.0% | |
| GCGCTCAATTGGTACGATCA+TGG | - | chr3_4:80637922-80637941 | None:intergenic | 50.0% | |
| CTCCTCTCCCAAGAGAGTTT+AGG | + | chr3_4:80638050-80638069 | Msa0526650:CDS | 50.0% | |
| ! | ACACGAACACGGGTTCTGAT+AGG | - | chr3_4:80638089-80638108 | None:intergenic | 50.0% |
| CTGGACAGAACAACAGACCC+TGG | - | chr3_4:80634322-80634341 | None:intergenic | 55.0% | |
| CATTGATGCTCCTGGGCATG+AGG | + | chr3_4:80634382-80634401 | Msa0526650:CDS | 55.0% | |
| ! | CAGAAGGCACGACCTAAGTG+AGG | + | chr3_4:80637644-80637663 | Msa0526650:intron | 55.0% |
| GGTTCAAGCTTGTGGCTCAC+TGG | + | chr3_4:80637875-80637894 | Msa0526650:intron | 55.0% | |
| CCACGATTGCATGGCGAGAA+GGG | - | chr3_4:80638022-80638041 | None:intergenic | 55.0% | |
| !! | GTTCTGGTGCCACGATTGCA+TGG | - | chr3_4:80638031-80638050 | None:intergenic | 55.0% |
| CTCTCTTGGGAGAGGAGTTC+TGG | - | chr3_4:80638047-80638066 | None:intergenic | 55.0% | |
| GATGCTCCTGGGCATGAGGT+CGG | + | chr3_4:80634386-80634405 | Msa0526650:intron | 60.0% | |
| TTGTGAGCTTGACTCCGGCC+TGG | - | chr3_4:80636824-80636843 | None:intergenic | 60.0% | |
| CCCTTCTCGCCATGCAATCG+TGG | + | chr3_4:80638019-80638038 | Msa0526650:CDS | 60.0% | |
| GCCACGATTGCATGGCGAGA+AGG | - | chr3_4:80638023-80638042 | None:intergenic | 60.0% | |
| GCATGGCGAGAAGGGCTTGC+TGG | - | chr3_4:80638014-80638033 | None:intergenic | 65.0% | |
| GCGACACCGACCTCATGCCC+AGG | - | chr3_4:80634395-80634414 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80633793 | 80638307 | 80633793 | ID=Msa0526650;Name=Msa0526650 |
| chr3_4 | mRNA | 80633793 | 80638307 | 80633793 | ID=Msa0526650-mRNA-1;Parent=Msa0526650;Name=Msa0526650-mRNA-1;_AED=0.22;_eAED=0.22;_QI=93|1|1|1|1|1|11|189|354 |
| chr3_4 | exon | 80633793 | 80633945 | 80633793 | ID=Msa0526650-mRNA-1:exon:24248;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80634038 | 80634137 | 80634038 | ID=Msa0526650-mRNA-1:exon:24249;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80634306 | 80634403 | 80634306 | ID=Msa0526650-mRNA-1:exon:24250;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80635157 | 80635245 | 80635157 | ID=Msa0526650-mRNA-1:exon:24251;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80635457 | 80635517 | 80635457 | ID=Msa0526650-mRNA-1:exon:24252;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80635605 | 80635691 | 80635605 | ID=Msa0526650-mRNA-1:exon:24253;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80635961 | 80636038 | 80635961 | ID=Msa0526650-mRNA-1:exon:24254;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80636121 | 80636177 | 80636121 | ID=Msa0526650-mRNA-1:exon:24255;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80636273 | 80636328 | 80636273 | ID=Msa0526650-mRNA-1:exon:24256;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80637647 | 80637782 | 80637647 | ID=Msa0526650-mRNA-1:exon:24257;Parent=Msa0526650-mRNA-1 |
| chr3_4 | exon | 80637876 | 80638307 | 80637876 | ID=Msa0526650-mRNA-1:exon:24258;Parent=Msa0526650-mRNA-1 |
| chr3_4 | five_prime_UTR | 80633793 | 80633885 | 80633793 | ID=Msa0526650-mRNA-1:five_prime_utr;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80633886 | 80633945 | 80633886 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80634038 | 80634137 | 80634038 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80634306 | 80634403 | 80634306 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80635157 | 80635245 | 80635157 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80635457 | 80635517 | 80635457 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80635605 | 80635691 | 80635605 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80635961 | 80636038 | 80635961 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80636121 | 80636177 | 80636121 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80636273 | 80636328 | 80636273 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80637647 | 80637782 | 80637647 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | CDS | 80637876 | 80638118 | 80637876 | ID=Msa0526650-mRNA-1:cds;Parent=Msa0526650-mRNA-1 |
| chr3_4 | three_prime_UTR | 80638119 | 80638307 | 80638119 | ID=Msa0526650-mRNA-1:three_prime_utr;Parent=Msa0526650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
