Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172320 | XP_003591009.1 | 99.718 | 354 | 1 | 0 | 1 | 354 | 1 | 354 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172320 | sp|Q9ASU8|NDL2_ARATH | 63.429 | 350 | 120 | 2 | 1 | 350 | 1 | 342 | 2.00e-166 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172320 | G7I6W5 | 99.718 | 354 | 1 | 0 | 1 | 354 | 1 | 354 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138090 | Msa0172320 | 0.821985 | 3.016549e-53 | -8.615850e-47 |
| Msa0172320 | Msa0191890 | 0.815918 | 7.226553e-52 | -8.615850e-47 |
| Msa0172320 | Msa0230370 | 0.833044 | 6.683680e-56 | -8.615850e-47 |
| Msa0172320 | Msa0261160 | 0.803114 | 4.068236e-49 | -8.615850e-47 |
| Msa0172320 | Msa0312530 | 0.830558 | 2.745400e-55 | -8.615850e-47 |
| Msa0172320 | Msa0429980 | 0.880325 | 6.025185e-70 | -8.615850e-47 |
| Msa0172320 | Msa0500640 | 0.871783 | 5.252034e-67 | -8.615850e-47 |
| Msa0172320 | Msa0500660 | 0.894285 | 2.848305e-75 | -8.615850e-47 |
| Msa0172320 | Msa0526650 | 0.991357 | 3.184338e-187 | -8.615850e-47 |
| Msa0172320 | Msa0526760 | 0.980430 | 3.361388e-150 | -8.615850e-47 |
| Msa0172320 | Msa0527130 | 0.888564 | 5.278869e-73 | -8.615850e-47 |
| Msa0172320 | Msa0750000 | 0.802361 | 5.818149e-49 | -8.615850e-47 |
| Msa0172320 | Msa0897630 | 0.833430 | 5.358268e-56 | -8.615850e-47 |
| Msa0172320 | Msa0924280 | 0.818567 | 1.832141e-52 | -8.615850e-47 |
| Msa0172320 | Msa1390250 | 0.994517 | 6.692332e-208 | -8.615850e-47 |
| Msa0172320 | Msa1401270 | 0.815105 | 1.096192e-51 | -8.615850e-47 |
| Msa0172320 | Msa1422020 | 0.853865 | 1.801427e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172320 | MtrunA17_Chr1g0190891 | 99.718 | 354 | 1 | 0 | 1 | 354 | 1 | 354 | 0.0 | 728 |
| Msa0172320 | MtrunA17_Chr8g0389281 | 65.819 | 354 | 114 | 1 | 1 | 354 | 1 | 347 | 1.67e-176 | 493 |
| Msa0172320 | MtrunA17_Chr1g0151691 | 66.366 | 333 | 105 | 1 | 21 | 353 | 2 | 327 | 2.77e-169 | 474 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172320 | AT5G11790.1 | 63.429 | 350 | 120 | 2 | 1 | 350 | 1 | 342 | 2.04e-167 | 471 |
| Msa0172320 | AT5G56750.1 | 62.571 | 350 | 124 | 1 | 1 | 350 | 1 | 343 | 1.99e-166 | 468 |
| Msa0172320 | AT2G19620.1 | 62.286 | 350 | 125 | 1 | 1 | 350 | 1 | 343 | 2.97e-160 | 452 |
| Msa0172320 | AT5G56750.2 | 63.609 | 327 | 112 | 1 | 24 | 350 | 5 | 324 | 2.37e-159 | 449 |
| Msa0172320 | AT2G19620.2 | 63.609 | 327 | 112 | 1 | 24 | 350 | 5 | 324 | 3.00e-155 | 439 |
| Msa0172320 | AT5G11790.2 | 63.946 | 294 | 98 | 2 | 57 | 350 | 3 | 288 | 2.92e-140 | 400 |
| Msa0172320 | AT2G19620.3 | 61.824 | 296 | 106 | 1 | 55 | 350 | 1 | 289 | 8.16e-136 | 389 |
Find 80 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGTGCTTGATTATTTC+GGG | 0.193671 | 1_4:+57325336 | Msa0172320:CDS |
| GGCAGATGTGTCTTGTTTCC+AGG | 0.235016 | 1_4:+57324413 | Msa0172320:intron |
| ATGAACTTGTTGTATTTCTA+TGG | 0.259747 | 1_4:+57326079 | Msa0172320:CDS |
| GCAGAAGTGCTTGATTATTT+CGG | 0.270404 | 1_4:+57325335 | Msa0172320:CDS |
| TGACATTGATTTGATACCTT+TGG | 0.276877 | 1_4:+57324031 | Msa0172320:CDS |
| CATGAAGGTCCTTTACAAAT+TGG | 0.278978 | 1_4:-57325759 | None:intergenic |
| CTCTCTTGGGAGAGGAGTTC+TGG | 0.294714 | 1_4:-57328155 | None:intergenic |
| ATTGGTACGATCATGGAAAT+TGG | 0.314818 | 1_4:-57328023 | None:intergenic |
| AGCATCAAAGAAGCTGCTTC+TGG | 0.321149 | 1_4:-57324450 | None:intergenic |
| GACATTGATTTGATACCTTT+GGG | 0.325512 | 1_4:+57324032 | Msa0172320:CDS |
| CTTAATTCCTAAACTCTCTT+GGG | 0.387702 | 1_4:-57328168 | None:intergenic |
| GCTTAATTCCTAAACTCTCT+TGG | 0.388514 | 1_4:-57328169 | None:intergenic |
| AAATGAAGCTGTGATCATTA+AGG | 0.393675 | 1_4:-57328236 | None:intergenic |
| GCATGGCGAGAAGGGCTTGC+TGG | 0.397270 | 1_4:-57328122 | None:intergenic |
| ACACGAACACGGGTTCTGAT+AGG | 0.401499 | 1_4:-57328197 | None:intergenic |
| CTCCTCTCCCAAGAGAGTTT+AGG | 0.402745 | 1_4:+57328161 | Msa0172320:CDS |
| TGCAAGACACTAATATTTGC+AGG | 0.409158 | 1_4:+57327795 | Msa0172320:CDS |
| CAATTTGTAAAGGACCTTCA+TGG | 0.410762 | 1_4:+57325760 | Msa0172320:CDS |
| ATTTATCACATTGATGCTCC+TGG | 0.412043 | 1_4:+57324486 | Msa0172320:CDS |
| TAGATAGATTCAGCATGAAA+TGG | 0.422812 | 1_4:-57327828 | None:intergenic |
| TGATCATTAAGGACTTGGTT+AGG | 0.437964 | 1_4:-57328225 | None:intergenic |
| TTACAATTAAGAGCCACATC+TGG | 0.442890 | 1_4:-57324235 | None:intergenic |
| GCAGATGTGTCTTGTTTCCA+GGG | 0.443576 | 1_4:+57324414 | Msa0172320:intron |
| AGCTGTGATCATTAAGGACT+TGG | 0.448574 | 1_4:-57328230 | None:intergenic |
| TCTGTTTCAGTGCTTATTTG+TGG | 0.452384 | 1_4:+57324181 | Msa0172320:CDS |
| TGTGGATGACCTAGCTGATC+AGG | 0.452943 | 1_4:+57325310 | Msa0172320:CDS |
| GTTAAGAGAGGTTATGTGCT+TGG | 0.453832 | 1_4:+57325569 | Msa0172320:CDS |
| GGAGCTTAGATGCAGTATCC+AGG | 0.455363 | 1_4:+57326232 | Msa0172320:intron |
| TTAAGAGAGGTTATGTGCTT+GGG | 0.469054 | 1_4:+57325570 | Msa0172320:CDS |
| CTTGTTTCACCAATTTGTAA+AGG | 0.476968 | 1_4:+57325750 | Msa0172320:CDS |
| GCGCTCAATTGGTACGATCA+TGG | 0.485074 | 1_4:-57328030 | None:intergenic |
| CCACGATTGCATGGCGAGAA+GGG | 0.491021 | 1_4:-57328130 | None:intergenic |
| AAATACAAAGAACGAGTGCT+TGG | 0.495399 | 1_4:+57325720 | Msa0172320:CDS |
| AGGTATCAAATCAATGTCAA+TGG | 0.496519 | 1_4:-57324027 | None:intergenic |
| CTTGCAGCGTTACTTCAGTA+AGG | 0.500056 | 1_4:+57326129 | Msa0172320:CDS |
| CTTGGTCAGGTTCAAGCTTG+TGG | 0.502124 | 1_4:+57327978 | Msa0172320:intron |
| GCCACGATTGCATGGCGAGA+AGG | 0.505755 | 1_4:-57328131 | None:intergenic |
| GGTTCAAGCTTGTGGCTCAC+TGG | 0.506474 | 1_4:+57327986 | Msa0172320:intron |
| TTACATCTGATTCTGCTCCC+TGG | 0.507167 | 1_4:-57326250 | None:intergenic |
| AAGGACCTTCATGGACTGAA+TGG | 0.512140 | 1_4:+57325769 | Msa0172320:CDS |
| TCTGGGTAAGTTATCAAAGC+AGG | 0.519292 | 1_4:-57324217 | None:intergenic |
| TTCCTAAACTCTCTTGGGAG+AGG | 0.520626 | 1_4:-57328163 | None:intergenic |
| CAAAATCTGCGCACTTGTTG+AGG | 0.524123 | 1_4:+57327872 | Msa0172320:CDS |
| CCCTTCTCGCCATGCAATCG+TGG | 0.524703 | 1_4:+57328130 | Msa0172320:CDS |
| TTTGATACCTTTGGGAGGAA+AGG | 0.528303 | 1_4:+57324040 | Msa0172320:CDS |
| AATTACAGCTTCTGGATGAA+AGG | 0.538316 | 1_4:+57326377 | Msa0172320:intron |
| AGTTCTTTAGTCCCTCACTT+AGG | 0.542267 | 1_4:-57327767 | None:intergenic |
| TTGATTACCTTTCCTCCCAA+AGG | 0.543228 | 1_4:-57324047 | None:intergenic |
| TTTATCACATTGATGCTCCT+GGG | 0.554973 | 1_4:+57324487 | Msa0172320:CDS |
| TACAATTAAGAGCCACATCT+GGG | 0.555273 | 1_4:-57324234 | None:intergenic |
| GAGCTTAGATGCAGTATCCA+GGG | 0.559037 | 1_4:+57326233 | Msa0172320:CDS |
| GTTCTGGTGCCACGATTGCA+TGG | 0.561235 | 1_4:-57328139 | None:intergenic |
| ATGTGCTTGGGAGTAACAGC+TGG | 0.567699 | 1_4:+57325582 | Msa0172320:CDS |
| GCGACACCGACCTCATGCCC+AGG | 0.569830 | 1_4:-57324504 | None:intergenic |
| AGATGAACCACTGCTTTGTG+TGG | 0.572998 | 1_4:+57325292 | Msa0172320:CDS |
| GTTAGGTTTCAACACGAACA+CGG | 0.579506 | 1_4:-57328208 | None:intergenic |
| CATTGATGCTCCTGGGCATG+AGG | 0.583175 | 1_4:+57324494 | Msa0172320:CDS |
| TGGTATGTGCGGTTTACTGA+AGG | 0.589171 | 1_4:+57326099 | Msa0172320:CDS |
| CTGGACAGAACAACAGACCC+TGG | 0.592111 | 1_4:-57324431 | None:intergenic |
| GACTGAATGGATTTACAACA+AGG | 0.594140 | 1_4:+57325782 | Msa0172320:CDS |
| TGTATAGTGAAAACAAGCAA+AGG | 0.596635 | 1_4:+57324157 | Msa0172320:CDS |
| TTTGATAACTTACCCAGATG+TGG | 0.603486 | 1_4:+57324222 | Msa0172320:CDS |
| TTAGGTTTCAACACGAACAC+GGG | 0.605369 | 1_4:-57328207 | None:intergenic |
| GTCTTAAATCAGGTTAAGAG+AGG | 0.606736 | 1_4:+57325557 | Msa0172320:intron |
| TAAATCCATTCAGTCCATGA+AGG | 0.607975 | 1_4:-57325774 | None:intergenic |
| TACTGAAGTAACGCTGCAAG+AGG | 0.611186 | 1_4:-57326126 | None:intergenic |
| TTTGCTTCCTCATCAAGCAA+CGG | 0.611961 | 1_4:+57328089 | Msa0172320:CDS |
| ATCACAGCTTCATTTCAGCA+TGG | 0.616542 | 1_4:+57328244 | Msa0172320:three_prime_UTR |
| ATGTACAACATCAATAGTGT+AGG | 0.623099 | 1_4:+57328323 | Msa0172320:three_prime_UTR |
| CAGAAGGCACGACCTAAGTG+AGG | 0.629716 | 1_4:+57327755 | Msa0172320:intron |
| TTGTATTTCTATGGTATGTG+CGG | 0.632844 | 1_4:+57326088 | Msa0172320:CDS |
| CTATATATATTTATGTGCAG+TGG | 0.634945 | 1_4:-57328286 | None:intergenic |
| AAGCAAAATGTGGTTGTCTG+TGG | 0.639448 | 1_4:-57328073 | None:intergenic |
| TGTTGAACCGTTGCTTGATG+AGG | 0.639451 | 1_4:-57328096 | None:intergenic |
| CTTCTGCAACCTGATCAGCT+AGG | 0.641514 | 1_4:-57325319 | None:intergenic |
| AACTTACAGCAAATAGTGTG+AGG | 0.646118 | 1_4:-57325614 | None:intergenic |
| CTTGATGAGGAAGCAAAATG+TGG | 0.649236 | 1_4:-57328083 | None:intergenic |
| ATTGATTTGATACCTTTGGG+AGG | 0.653147 | 1_4:+57324035 | Msa0172320:CDS |
| AGGTCATCCACACAAAGCAG+TGG | 0.683057 | 1_4:-57325299 | None:intergenic |
| AGAAGGCACGACCTAAGTGA+GGG | 0.696572 | 1_4:+57327756 | Msa0172320:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCATTTTTAATGAATA+TGG | - | chr1_4:57327914-57327933 | None:intergenic | 10.0% |
| !!! | TAATCATTTATGTTTTTGTT+TGG | + | chr1_4:57324121-57324140 | Msa0172320:intron | 15.0% |
| !! | GTTATTACAAACATATTTAT+TGG | + | chr1_4:57324331-57324350 | Msa0172320:intron | 15.0% |
| !!! | ATCTATTTCTTTATTCTTTA+TGG | - | chr1_4:57325159-57325178 | None:intergenic | 15.0% |
| !! | AAAAGAGTTTATTATACTTT+AGG | - | chr1_4:57325224-57325243 | None:intergenic | 15.0% |
| !!! | GATATTTTTTGTTTTTGTAA+AGG | + | chr1_4:57326611-57326630 | Msa0172320:intron | 15.0% |
| !! | TTATATATTAAAGTTTGGTT+TGG | - | chr1_4:57326904-57326923 | None:intergenic | 15.0% |
| !! | ATGTTTGTAATAACAAAATC+TGG | - | chr1_4:57324325-57324344 | None:intergenic | 20.0% |
| !!! | AGCAACTGTTTTTTTTTTTT+TGG | + | chr1_4:57324392-57324411 | Msa0172320:intron | 20.0% |
| !! | AACTTAAATATGTGAATCAT+AGG | - | chr1_4:57325184-57325203 | None:intergenic | 20.0% |
| !!! | AGTTTATTATACTTTAGGAT+TGG | - | chr1_4:57325219-57325238 | None:intergenic | 20.0% |
| !!! | TTTTTAGATAAATTGAACCA+AGG | + | chr1_4:57325421-57325440 | Msa0172320:intron | 20.0% |
| !!! | TTTAAGACATTTTTGTATGA+AGG | - | chr1_4:57325545-57325564 | None:intergenic | 20.0% |
| !! | ATACAAAAATGTCTTAAATC+AGG | + | chr1_4:57325547-57325566 | Msa0172320:intron | 20.0% |
| !!! | CATTATTATTTTCCATAATC+TGG | - | chr1_4:57325857-57325876 | None:intergenic | 20.0% |
| !! | TATGTAGATAGAATCATTTA+TGG | + | chr1_4:57326178-57326197 | Msa0172320:intron | 20.0% |
| !! | ATATAGTTATACATACTCTT+CGG | - | chr1_4:57326286-57326305 | None:intergenic | 20.0% |
| !!! | GAGTATGTATAACTATATTT+TGG | + | chr1_4:57326288-57326307 | Msa0172320:intron | 20.0% |
| !!! | TTGTTTTTGTTTTGTTTTCT+CGG | + | chr1_4:57326472-57326491 | Msa0172320:intron | 20.0% |
| !! | GCTAGTTATATATTAAAGTT+TGG | - | chr1_4:57326909-57326928 | None:intergenic | 20.0% |
| !!! | CATAGATGATTTTTGTTTTA+TGG | + | chr1_4:57327541-57327560 | Msa0172320:intron | 20.0% |
| !!! | TTTAAAGTAATTATCCTACT+TGG | - | chr1_4:57327661-57327680 | None:intergenic | 20.0% |
| !!! | TCATTTATGTTTTTGTTTGG+AGG | + | chr1_4:57324124-57324143 | Msa0172320:intron | 25.0% |
| ! | TAAACTAATACTAGGAAGAA+TGG | - | chr1_4:57324529-57324548 | None:intergenic | 25.0% |
| ! | AAGGTTAGTAAACTAATACT+AGG | - | chr1_4:57324537-57324556 | None:intergenic | 25.0% |
| ! | AAACTATCCTAGAAACATAA+TGG | + | chr1_4:57324568-57324587 | Msa0172320:intron | 25.0% |
| ! | CTTATTTCCATTATGTTTCT+AGG | - | chr1_4:57324578-57324597 | None:intergenic | 25.0% |
| !! | GTTCATATCAATGTTTTACT+TGG | + | chr1_4:57324728-57324747 | Msa0172320:intron | 25.0% |
| !! | ATTGAGTTGTTTATTCAAAC+AGG | - | chr1_4:57324826-57324845 | None:intergenic | 25.0% |
| ! | GAATAAACAACTCAATTAAG+TGG | + | chr1_4:57324830-57324849 | Msa0172320:intron | 25.0% |
| ! | ACATGATTCACTTCAATTTA+GGG | - | chr1_4:57325066-57325085 | None:intergenic | 25.0% |
| !!! | ATTATGTACTCATTTTTCCT+TGG | - | chr1_4:57325441-57325460 | None:intergenic | 25.0% |
| ! | TTGATACTCTTACTTTGATT+AGG | + | chr1_4:57325512-57325531 | Msa0172320:intron | 25.0% |
| !! | TATGATAAAAGCATGAAAGT+GGG | - | chr1_4:57325815-57325834 | None:intergenic | 25.0% |
| !! | ATATGATAAAAGCATGAAAG+TGG | - | chr1_4:57325816-57325835 | None:intergenic | 25.0% |
| ! | TACTCAAACACATGATAAAT+AGG | - | chr1_4:57325902-57325921 | None:intergenic | 25.0% |
| !!! | ATGAACTTGTTGTATTTCTA+TGG | + | chr1_4:57326079-57326098 | Msa0172320:CDS | 25.0% |
| ! | TAGTGTACAATTATGACTAA+TGG | + | chr1_4:57326335-57326354 | Msa0172320:intron | 25.0% |
| ! | GTAATTATAGATCAGAAAAG+AGG | - | chr1_4:57326363-57326382 | None:intergenic | 25.0% |
| !! | CATCAATAATAACAGGTTTT+AGG | - | chr1_4:57326565-57326584 | None:intergenic | 25.0% |
| ! | AGGTTATCATCAATAATAAC+AGG | - | chr1_4:57326572-57326591 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTAAGCAAACGT+TGG | - | chr1_4:57326701-57326720 | None:intergenic | 25.0% |
| !!! | ATATTAAAGTTTGGTTTGGA+AGG | - | chr1_4:57326900-57326919 | None:intergenic | 25.0% |
| ! | AATATATAACTAGCATAACC+AGG | + | chr1_4:57326915-57326934 | Msa0172320:intron | 25.0% |
| !!! | AATAGTTTTGGTGTAGAATT+TGG | - | chr1_4:57327080-57327099 | None:intergenic | 25.0% |
| ! | CTAAAAAGATGCAATTGTAA+TGG | - | chr1_4:57327144-57327163 | None:intergenic | 25.0% |
| !! | TGCATTAAATCTTGATTTTG+AGG | - | chr1_4:57327216-57327235 | None:intergenic | 25.0% |
| ! | TATTAGTGAGGAATAAGATA+GGG | - | chr1_4:57327304-57327323 | None:intergenic | 25.0% |
| ! | TTAAATTAACTTCGAGGAAT+TGG | - | chr1_4:57327376-57327395 | None:intergenic | 25.0% |
| ! | AACAGATTAAATTAACTTCG+AGG | - | chr1_4:57327382-57327401 | None:intergenic | 25.0% |
| !! | CATTGTGATTTCTACAATTT+TGG | - | chr1_4:57327405-57327424 | None:intergenic | 25.0% |
| !!! | GGATAATTACTTTAAAATGC+TGG | + | chr1_4:57327665-57327684 | Msa0172320:intron | 25.0% |
| !!! | AGCATTTTGGTAATTAATCA+TGG | - | chr1_4:57327725-57327744 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACAACACATACT+TGG | + | chr1_4:57327960-57327979 | Msa0172320:intron | 25.0% |
| ! | CTATATATATTTATGTGCAG+TGG | - | chr1_4:57328289-57328308 | None:intergenic | 25.0% |
| !!! | TCTACTTTTTTTACATTGAC+AGG | - | chr1_4:57328392-57328411 | None:intergenic | 25.0% |
| AGGTATCAAATCAATGTCAA+TGG | - | chr1_4:57324030-57324049 | None:intergenic | 30.0% | |
| !! | TGACATTGATTTGATACCTT+TGG | + | chr1_4:57324031-57324050 | Msa0172320:CDS | 30.0% |
| !! | GACATTGATTTGATACCTTT+GGG | + | chr1_4:57324032-57324051 | Msa0172320:CDS | 30.0% |
| TGTATAGTGAAAACAAGCAA+AGG | + | chr1_4:57324157-57324176 | Msa0172320:CDS | 30.0% | |
| AATGGAAATAAGTCGAAAAC+AGG | + | chr1_4:57324586-57324605 | Msa0172320:intron | 30.0% | |
| GTTAGTGTAGTTAATAGTCT+AGG | + | chr1_4:57324671-57324690 | Msa0172320:intron | 30.0% | |
| ! | ATCAATGTTTTACTTGGAGA+AGG | + | chr1_4:57324734-57324753 | Msa0172320:intron | 30.0% |
| TATGGAAATAAGCTGAAAAC+AGG | + | chr1_4:57324937-57324956 | Msa0172320:intron | 30.0% | |
| ACGTATTTGAGCTTATTTAC+TGG | - | chr1_4:57325026-57325045 | None:intergenic | 30.0% | |
| GACATGATTCACTTCAATTT+AGG | - | chr1_4:57325067-57325086 | None:intergenic | 30.0% | |
| AAAGAAAAGGGACATAGAAT+AGG | - | chr1_4:57325109-57325128 | None:intergenic | 30.0% | |
| AACCCTCTATAGAAAGAAAA+GGG | - | chr1_4:57325121-57325140 | None:intergenic | 30.0% | |
| GTTTAAGAGATATTGCAGTT+AGG | + | chr1_4:57325251-57325270 | Msa0172320:intron | 30.0% | |
| ! | TACTTGTTACTATGTAGCAT+CGG | - | chr1_4:57325384-57325403 | None:intergenic | 30.0% |
| ATGACGAAAAATTAACACGA+TGG | - | chr1_4:57325690-57325709 | None:intergenic | 30.0% | |
| CTTGTTTCACCAATTTGTAA+AGG | + | chr1_4:57325750-57325769 | Msa0172320:CDS | 30.0% | |
| ! | ATGATAAAAGCATGAAAGTG+GGG | - | chr1_4:57325814-57325833 | None:intergenic | 30.0% |
| TAATAATGCATAGTCTGACA+CGG | + | chr1_4:57325869-57325888 | Msa0172320:intron | 30.0% | |
| ! | TTGTATTTCTATGGTATGTG+CGG | + | chr1_4:57326088-57326107 | Msa0172320:CDS | 30.0% |
| TATTCTTCTCATTCTTCAAC+AGG | + | chr1_4:57326152-57326171 | Msa0172320:intron | 30.0% | |
| GTAGATAGAATCATTTATGG+AGG | + | chr1_4:57326181-57326200 | Msa0172320:intron | 30.0% | |
| ACTTCTCTTCAACTTTGAAT+AGG | + | chr1_4:57326211-57326230 | Msa0172320:intron | 30.0% | |
| TGATCTATAATTACAGCTTC+TGG | + | chr1_4:57326369-57326388 | Msa0172320:intron | 30.0% | |
| ! | GATGAATTTTCAAAGCTTGA+GGG | - | chr1_4:57326511-57326530 | None:intergenic | 30.0% |
| ! | AGATGAATTTTCAAAGCTTG+AGG | - | chr1_4:57326512-57326531 | None:intergenic | 30.0% |
| CAAATGTCTCGAGAATATTT+AGG | - | chr1_4:57326592-57326611 | None:intergenic | 30.0% | |
| !! | TTCTTTGGAGTTGTTTAGAA+AGG | - | chr1_4:57326859-57326878 | None:intergenic | 30.0% |
| !! | CAGTCAAATTTGTTGTTCTT+TGG | - | chr1_4:57326874-57326893 | None:intergenic | 30.0% |
| GAATACCTCATCTTAAGATT+TGG | - | chr1_4:57326977-57326996 | None:intergenic | 30.0% | |
| AGGATGAAACATTTATACAG+AGG | - | chr1_4:57327281-57327300 | None:intergenic | 30.0% | |
| GTATTAGTGAGGAATAAGAT+AGG | - | chr1_4:57327305-57327324 | None:intergenic | 30.0% | |
| ! | GTTTAAGTGCTGTCATATAT+TGG | - | chr1_4:57327334-57327353 | None:intergenic | 30.0% |
| TAAACCATTGTGATTTCTGA+AGG | - | chr1_4:57327446-57327465 | None:intergenic | 30.0% | |
| !!! | CTATGAACTTGTTGGATTTT+GGG | + | chr1_4:57327587-57327606 | Msa0172320:intron | 30.0% |
| TAGATAGATTCAGCATGAAA+TGG | - | chr1_4:57327831-57327850 | None:intergenic | 30.0% | |
| CTTAATTCCTAAACTCTCTT+GGG | - | chr1_4:57328171-57328190 | None:intergenic | 30.0% | |
| AAATGAAGCTGTGATCATTA+AGG | - | chr1_4:57328239-57328258 | None:intergenic | 30.0% | |
| ATGTACAACATCAATAGTGT+AGG | + | chr1_4:57328323-57328342 | Msa0172320:three_prime_UTR | 30.0% | |
| !! | ATTGATTTGATACCTTTGGG+AGG | + | chr1_4:57324035-57324054 | Msa0172320:CDS | 35.0% |
| TCTGTTTCAGTGCTTATTTG+TGG | + | chr1_4:57324181-57324200 | Msa0172320:CDS | 35.0% | |
| ! | TTTGATAACTTACCCAGATG+TGG | + | chr1_4:57324222-57324241 | Msa0172320:CDS | 35.0% |
| TACAATTAAGAGCCACATCT+GGG | - | chr1_4:57324237-57324256 | None:intergenic | 35.0% | |
| TTACAATTAAGAGCCACATC+TGG | - | chr1_4:57324238-57324257 | None:intergenic | 35.0% | |
| ATTTATCACATTGATGCTCC+TGG | + | chr1_4:57324486-57324505 | Msa0172320:CDS | 35.0% | |
| TTTATCACATTGATGCTCCT+GGG | + | chr1_4:57324487-57324506 | Msa0172320:CDS | 35.0% | |
| GATAGTTTATGAAAGCAGGA+AGG | - | chr1_4:57324556-57324575 | None:intergenic | 35.0% | |
| CTAGGATAGTTTATGAAAGC+AGG | - | chr1_4:57324560-57324579 | None:intergenic | 35.0% | |
| AATAAGTCGAAAACAGGCTA+TGG | + | chr1_4:57324592-57324611 | Msa0172320:intron | 35.0% | |
| TACACTAACTGATACCATTG+AGG | - | chr1_4:57324660-57324679 | None:intergenic | 35.0% | |
| AAACTATCCTAGAGAGCTTA+TGG | + | chr1_4:57324919-57324938 | Msa0172320:intron | 35.0% | |
| CTTATTTCCATAAGCTCTCT+AGG | - | chr1_4:57324929-57324948 | None:intergenic | 35.0% | |
| ATAAGCTGAAAACAGGCTAA+AGG | + | chr1_4:57324944-57324963 | Msa0172320:intron | 35.0% | |
| ! | ACTTCAATTTAGGGCTTGTT+TGG | - | chr1_4:57325057-57325076 | None:intergenic | 35.0% |
| ! | TGTCCCTTTTCTTTCTATAG+AGG | + | chr1_4:57325115-57325134 | Msa0172320:intron | 35.0% |
| ! | GTCCCTTTTCTTTCTATAGA+GGG | + | chr1_4:57325116-57325135 | Msa0172320:intron | 35.0% |
| CAACCCTCTATAGAAAGAAA+AGG | - | chr1_4:57325122-57325141 | None:intergenic | 35.0% | |
| TTTCTTTCTATAGAGGGTTG+AGG | + | chr1_4:57325122-57325141 | Msa0172320:intron | 35.0% | |
| !! | GCAGAAGTGCTTGATTATTT+CGG | + | chr1_4:57325335-57325354 | Msa0172320:CDS | 35.0% |
| !! | CAGAAGTGCTTGATTATTTC+GGG | + | chr1_4:57325336-57325355 | Msa0172320:CDS | 35.0% |
| GTCTTAAATCAGGTTAAGAG+AGG | + | chr1_4:57325557-57325576 | Msa0172320:intron | 35.0% | |
| TTAAGAGAGGTTATGTGCTT+GGG | + | chr1_4:57325570-57325589 | Msa0172320:CDS | 35.0% | |
| AACTTACAGCAAATAGTGTG+AGG | - | chr1_4:57325617-57325636 | None:intergenic | 35.0% | |
| AAATACAAAGAACGAGTGCT+TGG | + | chr1_4:57325720-57325739 | Msa0172320:CDS | 35.0% | |
| CATGAAGGTCCTTTACAAAT+TGG | - | chr1_4:57325762-57325781 | None:intergenic | 35.0% | |
| CAATTTGTAAAGGACCTTCA+TGG | + | chr1_4:57325760-57325779 | Msa0172320:CDS | 35.0% | |
| TAAATCCATTCAGTCCATGA+AGG | - | chr1_4:57325777-57325796 | None:intergenic | 35.0% | |
| ! | GACTGAATGGATTTACAACA+AGG | + | chr1_4:57325782-57325801 | Msa0172320:CDS | 35.0% |
| CTATTGCAACAACCAGATTA+TGG | + | chr1_4:57325842-57325861 | Msa0172320:intron | 35.0% | |
| AATCACAGGCGTTTATAATG+CGG | - | chr1_4:57325952-57325971 | None:intergenic | 35.0% | |
| ! | AAGAGTGTGTTTAGAATCAC+AGG | - | chr1_4:57325966-57325985 | None:intergenic | 35.0% |
| TGTAAACATTCTGCTTCAAG+AGG | - | chr1_4:57326033-57326052 | None:intergenic | 35.0% | |
| TCTTGAAGCAGAATGTTTAC+AGG | + | chr1_4:57326032-57326051 | Msa0172320:intron | 35.0% | |
| AATTACAGCTTCTGGATGAA+AGG | + | chr1_4:57326377-57326396 | Msa0172320:intron | 35.0% | |
| ! | CTAAGTGCTTTAAGCTAGTT+TGG | - | chr1_4:57326748-57326767 | None:intergenic | 35.0% |
| AGATATTGGCAGTGATGATT+GGG | - | chr1_4:57326791-57326810 | None:intergenic | 35.0% | |
| CTGCAAAATTCTGCAGATAT+TGG | - | chr1_4:57326805-57326824 | None:intergenic | 35.0% | |
| ! | CAATATCTGCAGAATTTTGC+AGG | + | chr1_4:57326803-57326822 | Msa0172320:intron | 35.0% |
| TACCTCATCTTAAGATTTGG+TGG | - | chr1_4:57326974-57326993 | None:intergenic | 35.0% | |
| AAAATTCCCACCTTCAATGA+TGG | + | chr1_4:57327007-57327026 | Msa0172320:intron | 35.0% | |
| ! | GTTTTCTATGCCATCATTGA+AGG | - | chr1_4:57327020-57327039 | None:intergenic | 35.0% |
| !! | AGTTTTGGTGTAGAATTTGG+TGG | - | chr1_4:57327077-57327096 | None:intergenic | 35.0% |
| !! | GATTTTGAGGATGACATATC+TGG | - | chr1_4:57327203-57327222 | None:intergenic | 35.0% |
| AACTCCTTCAGAAATCACAA+TGG | + | chr1_4:57327439-57327458 | Msa0172320:intron | 35.0% | |
| !! | ATGAACCAAACTTTAGCTTG+TGG | + | chr1_4:57327564-57327583 | Msa0172320:intron | 35.0% |
| !!! | GCTATGAACTTGTTGGATTT+TGG | + | chr1_4:57327586-57327605 | Msa0172320:intron | 35.0% |
| !! | ATTTTGGGTGTGGACTAATA+TGG | + | chr1_4:57327602-57327621 | Msa0172320:intron | 35.0% |
| TGCAAGACACTAATATTTGC+AGG | + | chr1_4:57327795-57327814 | Msa0172320:CDS | 35.0% | |
| !! | GTTGCTATTTGAGTATCTTG+TGG | - | chr1_4:57327937-57327956 | None:intergenic | 35.0% |
| TTTACAACACATACTTGGTC+AGG | + | chr1_4:57327965-57327984 | Msa0172320:intron | 35.0% | |
| ATTGGTACGATCATGGAAAT+TGG | - | chr1_4:57328026-57328045 | None:intergenic | 35.0% | |
| !! | ACCAATTGAGCGCTTTTTAA+TGG | + | chr1_4:57328040-57328059 | Msa0172320:CDS | 35.0% |
| !! | CCAATTGAGCGCTTTTTAAT+GGG | + | chr1_4:57328041-57328060 | Msa0172320:CDS | 35.0% |
| !! | CAATTGAGCGCTTTTTAATG+GGG | + | chr1_4:57328042-57328061 | Msa0172320:CDS | 35.0% |
| GCTTAATTCCTAAACTCTCT+TGG | - | chr1_4:57328172-57328191 | None:intergenic | 35.0% | |
| ! | TGATCATTAAGGACTTGGTT+AGG | - | chr1_4:57328228-57328247 | None:intergenic | 35.0% |
| ! | TTTGATACCTTTGGGAGGAA+AGG | + | chr1_4:57324040-57324059 | Msa0172320:CDS | 40.0% |
| TTGATTACCTTTCCTCCCAA+AGG | - | chr1_4:57324050-57324069 | None:intergenic | 40.0% | |
| !! | GTTTTTGTTTGGAGGTTTGC+AGG | + | chr1_4:57324132-57324151 | Msa0172320:intron | 40.0% |
| TCTGGGTAAGTTATCAAAGC+AGG | - | chr1_4:57324220-57324239 | None:intergenic | 40.0% | |
| TAGTCTAGGCTAGTAGCTAA+TGG | + | chr1_4:57324685-57324704 | Msa0172320:intron | 40.0% | |
| TTCCAGTTTACACCGTGAAA+AGG | + | chr1_4:57324792-57324811 | Msa0172320:intron | 40.0% | |
| ! | ATCCTTTTCACGGTGTAAAC+TGG | - | chr1_4:57324797-57324816 | None:intergenic | 40.0% |
| TTACACCGTGAAAAGGATTG+AGG | + | chr1_4:57324799-57324818 | Msa0172320:intron | 40.0% | |
| TGTCTAATGTCTGCAGACAT+AGG | + | chr1_4:57325083-57325102 | Msa0172320:intron | 40.0% | |
| !! | ACTATGTAGCATCGGTGAAT+AGG | - | chr1_4:57325376-57325395 | None:intergenic | 40.0% |
| GTTAAGAGAGGTTATGTGCT+TGG | + | chr1_4:57325569-57325588 | Msa0172320:CDS | 40.0% | |
| ! | ATAAAAGCATGAAAGTGGGG+AGG | - | chr1_4:57325811-57325830 | None:intergenic | 40.0% |
| ! | CAGGTTTTCTACATTCATGC+AGG | + | chr1_4:57326051-57326070 | Msa0172320:intron | 40.0% |
| ! | GAATTTTCAAAGCTTGAGGG+AGG | - | chr1_4:57326508-57326527 | None:intergenic | 40.0% |
| TGAGCCATTTCACACAACAA+CGG | + | chr1_4:57326531-57326550 | Msa0172320:intron | 40.0% | |
| TACACCGTTGTTGTGTGAAA+TGG | - | chr1_4:57326538-57326557 | None:intergenic | 40.0% | |
| CAGATATTGGCAGTGATGAT+TGG | - | chr1_4:57326792-57326811 | None:intergenic | 40.0% | |
| ! | GCAGAATTTTGCAGGAAAAG+AGG | + | chr1_4:57326811-57326830 | Msa0172320:intron | 40.0% |
| TATAACTAGCATAACCAGGC+CGG | + | chr1_4:57326919-57326938 | Msa0172320:intron | 40.0% | |
| TGTATTTGTGAGCTTGACTC+CGG | - | chr1_4:57326941-57326960 | None:intergenic | 40.0% | |
| !! | CTTAAGATTTGGTGGCTGAT+TGG | - | chr1_4:57326966-57326985 | None:intergenic | 40.0% |
| AGCCACCAAATCTTAAGATG+AGG | + | chr1_4:57326969-57326988 | Msa0172320:intron | 40.0% | |
| ! | AGATGAGGTATTCCAACTTG+TGG | + | chr1_4:57326984-57327003 | Msa0172320:intron | 40.0% |
| TCTATGCCATCATTGAAGGT+GGG | - | chr1_4:57327016-57327035 | None:intergenic | 40.0% | |
| TTCTATGCCATCATTGAAGG+TGG | - | chr1_4:57327017-57327036 | None:intergenic | 40.0% | |
| ATATTGCACTAGAGTGTGCA+AGG | - | chr1_4:57327054-57327073 | None:intergenic | 40.0% | |
| ! | GCAGTAGCATGCAATAGTTT+TGG | - | chr1_4:57327092-57327111 | None:intergenic | 40.0% |
| ! | TACAGAGGTATGTTGTGAGA+CGG | - | chr1_4:57327266-57327285 | None:intergenic | 40.0% |
| TAGTGAGGAATAAGATAGGG+AGG | - | chr1_4:57327301-57327320 | None:intergenic | 40.0% | |
| ATTGGCACAGTGTATTAGTG+AGG | - | chr1_4:57327316-57327335 | None:intergenic | 40.0% | |
| ! | AGGAATTGGTTCATAAGAGG+AGG | - | chr1_4:57327362-57327381 | None:intergenic | 40.0% |
| ! | TCGAGGAATTGGTTCATAAG+AGG | - | chr1_4:57327365-57327384 | None:intergenic | 40.0% |
| CATAGCCACAAGCTAAAGTT+TGG | - | chr1_4:57327572-57327591 | None:intergenic | 40.0% | |
| !!! | AACTTGTTGGATTTTGGGTG+TGG | + | chr1_4:57327592-57327611 | Msa0172320:intron | 40.0% |
| AGTTCTTTAGTCCCTCACTT+AGG | - | chr1_4:57327770-57327789 | None:intergenic | 40.0% | |
| !! | CCCATTAAAAAGCGCTCAAT+TGG | - | chr1_4:57328044-57328063 | None:intergenic | 40.0% |
| AAGCAAAATGTGGTTGTCTG+TGG | - | chr1_4:57328076-57328095 | None:intergenic | 40.0% | |
| CTTGATGAGGAAGCAAAATG+TGG | - | chr1_4:57328086-57328105 | None:intergenic | 40.0% | |
| TTTGCTTCCTCATCAAGCAA+CGG | + | chr1_4:57328089-57328108 | Msa0172320:CDS | 40.0% | |
| TTAGGTTTCAACACGAACAC+GGG | - | chr1_4:57328210-57328229 | None:intergenic | 40.0% | |
| GTTAGGTTTCAACACGAACA+CGG | - | chr1_4:57328211-57328230 | None:intergenic | 40.0% | |
| AGCTGTGATCATTAAGGACT+TGG | - | chr1_4:57328233-57328252 | None:intergenic | 40.0% | |
| ATCACAGCTTCATTTCAGCA+TGG | + | chr1_4:57328244-57328263 | Msa0172320:three_prime_UTR | 40.0% | |
| !! | GCAGATGTGTCTTGTTTCCA+GGG | + | chr1_4:57324414-57324433 | Msa0172320:intron | 45.0% |
| AGCATCAAAGAAGCTGCTTC+TGG | - | chr1_4:57324453-57324472 | None:intergenic | 45.0% | |
| AGTCGAAAACAGGCTATGGA+TGG | + | chr1_4:57324596-57324615 | Msa0172320:intron | 45.0% | |
| ! | CAGGACCTCAATCCTTTTCA+CGG | - | chr1_4:57324807-57324826 | None:intergenic | 45.0% |
| AGATGAACCACTGCTTTGTG+TGG | + | chr1_4:57325292-57325311 | Msa0172320:CDS | 45.0% | |
| ! | AAGGACCTTCATGGACTGAA+TGG | + | chr1_4:57325769-57325788 | Msa0172320:CDS | 45.0% |
| TGGTATGTGCGGTTTACTGA+AGG | + | chr1_4:57326099-57326118 | Msa0172320:CDS | 45.0% | |
| TACTGAAGTAACGCTGCAAG+AGG | - | chr1_4:57326129-57326148 | None:intergenic | 45.0% | |
| CTTGCAGCGTTACTTCAGTA+AGG | + | chr1_4:57326129-57326148 | Msa0172320:CDS | 45.0% | |
| GAGCTTAGATGCAGTATCCA+GGG | + | chr1_4:57326233-57326252 | Msa0172320:CDS | 45.0% | |
| TTACATCTGATTCTGCTCCC+TGG | - | chr1_4:57326253-57326272 | None:intergenic | 45.0% | |
| ! | GGTGGGAATTTTCCACAAGT+TGG | - | chr1_4:57326999-57327018 | None:intergenic | 45.0% |
| AGTGTGCAAGGATGCATCAT+AGG | - | chr1_4:57327042-57327061 | None:intergenic | 45.0% | |
| !! | TCTGGTGTGTTGACTATGTG+TGG | - | chr1_4:57327185-57327204 | None:intergenic | 45.0% |
| GCTTGTGGCTATGAACTTGT+TGG | + | chr1_4:57327579-57327598 | Msa0172320:intron | 45.0% | |
| GCGAATGAATACTGCCAAGT+AGG | + | chr1_4:57327644-57327663 | Msa0172320:intron | 45.0% | |
| ! | CTGCAAGCAGTTCAGCATTT+TGG | - | chr1_4:57327738-57327757 | None:intergenic | 45.0% |
| AATGCTGAACTGCTTGCAGA+AGG | + | chr1_4:57327739-57327758 | Msa0172320:intron | 45.0% | |
| ! | CAAAATCTGCGCACTTGTTG+AGG | + | chr1_4:57327872-57327891 | Msa0172320:CDS | 45.0% |
| !! | GAGCGCTTTTTAATGGGGTT+TGG | + | chr1_4:57328047-57328066 | Msa0172320:CDS | 45.0% |
| TGTTGAACCGTTGCTTGATG+AGG | - | chr1_4:57328099-57328118 | None:intergenic | 45.0% | |
| TTCCTAAACTCTCTTGGGAG+AGG | - | chr1_4:57328166-57328185 | None:intergenic | 45.0% | |
| !! | GGCAGATGTGTCTTGTTTCC+AGG | + | chr1_4:57324413-57324432 | Msa0172320:intron | 50.0% |
| GCTCTCACAAACAGCCTCAA+TGG | + | chr1_4:57324643-57324662 | Msa0172320:intron | 50.0% | |
| AGGTCATCCACACAAAGCAG+TGG | - | chr1_4:57325302-57325321 | None:intergenic | 50.0% | |
| TGTGGATGACCTAGCTGATC+AGG | + | chr1_4:57325310-57325329 | Msa0172320:CDS | 50.0% | |
| CTTCTGCAACCTGATCAGCT+AGG | - | chr1_4:57325322-57325341 | None:intergenic | 50.0% | |
| ATGTGCTTGGGAGTAACAGC+TGG | + | chr1_4:57325582-57325601 | Msa0172320:CDS | 50.0% | |
| GGAGCTTAGATGCAGTATCC+AGG | + | chr1_4:57326232-57326251 | Msa0172320:intron | 50.0% | |
| AAAGCTTGAGGGAGGAGTAG+AGG | - | chr1_4:57326500-57326519 | None:intergenic | 50.0% | |
| TGCTACTGCTGCAACAGACT+TGG | + | chr1_4:57327103-57327122 | Msa0172320:intron | 50.0% | |
| ! | AGAAGGCACGACCTAAGTGA+GGG | + | chr1_4:57327756-57327775 | Msa0172320:intron | 50.0% |
| CTTGGTCAGGTTCAAGCTTG+TGG | + | chr1_4:57327978-57327997 | Msa0172320:intron | 50.0% | |
| GCGCTCAATTGGTACGATCA+TGG | - | chr1_4:57328033-57328052 | None:intergenic | 50.0% | |
| CTCCTCTCCCAAGAGAGTTT+AGG | + | chr1_4:57328161-57328180 | Msa0172320:CDS | 50.0% | |
| ! | ACACGAACACGGGTTCTGAT+AGG | - | chr1_4:57328200-57328219 | None:intergenic | 50.0% |
| CTGGACAGAACAACAGACCC+TGG | - | chr1_4:57324434-57324453 | None:intergenic | 55.0% | |
| CATTGATGCTCCTGGGCATG+AGG | + | chr1_4:57324494-57324513 | Msa0172320:CDS | 55.0% | |
| ! | CAGAAGGCACGACCTAAGTG+AGG | + | chr1_4:57327755-57327774 | Msa0172320:intron | 55.0% |
| GGTTCAAGCTTGTGGCTCAC+TGG | + | chr1_4:57327986-57328005 | Msa0172320:intron | 55.0% | |
| CCACGATTGCATGGCGAGAA+GGG | - | chr1_4:57328133-57328152 | None:intergenic | 55.0% | |
| !! | GTTCTGGTGCCACGATTGCA+TGG | - | chr1_4:57328142-57328161 | None:intergenic | 55.0% |
| CTCTCTTGGGAGAGGAGTTC+TGG | - | chr1_4:57328158-57328177 | None:intergenic | 55.0% | |
| GATGCTCCTGGGCATGAGGT+CGG | + | chr1_4:57324498-57324517 | Msa0172320:intron | 60.0% | |
| TTGTGAGCTTGACTCCGGCC+TGG | - | chr1_4:57326936-57326955 | None:intergenic | 60.0% | |
| CCCTTCTCGCCATGCAATCG+TGG | + | chr1_4:57328130-57328149 | Msa0172320:CDS | 60.0% | |
| GCCACGATTGCATGGCGAGA+AGG | - | chr1_4:57328134-57328153 | None:intergenic | 60.0% | |
| GCATGGCGAGAAGGGCTTGC+TGG | - | chr1_4:57328125-57328144 | None:intergenic | 65.0% | |
| GCGACACCGACCTCATGCCC+AGG | - | chr1_4:57324507-57324526 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57323911 | 57328418 | 57323911 | ID=Msa0172320;Name=Msa0172320 |
| chr1_4 | mRNA | 57323911 | 57328418 | 57323911 | ID=Msa0172320-mRNA-1;Parent=Msa0172320;Name=Msa0172320-mRNA-1;_AED=0.20;_eAED=0.20;_QI=91|1|1|1|1|1|11|189|354 |
| chr1_4 | exon | 57323911 | 57324061 | 57323911 | ID=Msa0172320-mRNA-1:exon:17531;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57324154 | 57324253 | 57324154 | ID=Msa0172320-mRNA-1:exon:17532;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57324418 | 57324515 | 57324418 | ID=Msa0172320-mRNA-1:exon:17533;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57325269 | 57325357 | 57325269 | ID=Msa0172320-mRNA-1:exon:17534;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57325569 | 57325629 | 57325569 | ID=Msa0172320-mRNA-1:exon:17535;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57325717 | 57325803 | 57325717 | ID=Msa0172320-mRNA-1:exon:17536;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57326073 | 57326150 | 57326073 | ID=Msa0172320-mRNA-1:exon:17537;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57326233 | 57326289 | 57326233 | ID=Msa0172320-mRNA-1:exon:17538;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57326385 | 57326440 | 57326385 | ID=Msa0172320-mRNA-1:exon:17539;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57327758 | 57327893 | 57327758 | ID=Msa0172320-mRNA-1:exon:17540;Parent=Msa0172320-mRNA-1 |
| chr1_4 | exon | 57327987 | 57328418 | 57327987 | ID=Msa0172320-mRNA-1:exon:17541;Parent=Msa0172320-mRNA-1 |
| chr1_4 | five_prime_UTR | 57323911 | 57324001 | 57323911 | ID=Msa0172320-mRNA-1:five_prime_utr;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57324002 | 57324061 | 57324002 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57324154 | 57324253 | 57324154 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57324418 | 57324515 | 57324418 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57325269 | 57325357 | 57325269 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57325569 | 57325629 | 57325569 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57325717 | 57325803 | 57325717 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57326073 | 57326150 | 57326073 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57326233 | 57326289 | 57326233 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57326385 | 57326440 | 57326385 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57327758 | 57327893 | 57327758 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | CDS | 57327987 | 57328229 | 57327987 | ID=Msa0172320-mRNA-1:cds;Parent=Msa0172320-mRNA-1 |
| chr1_4 | three_prime_UTR | 57328230 | 57328418 | 57328230 | ID=Msa0172320-mRNA-1:three_prime_utr;Parent=Msa0172320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
