AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0505470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505470 MtrunA17_Chr3g0106491 93.177 513 28 2 1 511 1 508 0.0 920
Msa0505470 MtrunA17_Chr5g0432161 57.143 567 166 18 1 510 35 581 2.66e-164 478
Msa0505470 MtrunA17_Chr7g0243891 47.818 527 200 21 39 511 37 542 1.30e-125 377
Msa0505470 MtrunA17_Chr4g0004911 46.300 473 201 14 61 510 47 489 8.29e-107 327
Msa0505470 MtrunA17_Chr5g0445311 44.313 422 180 11 40 427 28 428 2.16e-94 297
Msa0505470 MtrunA17_Chr3g0101131 43.213 442 184 13 40 425 47 477 1.64e-91 291
Msa0505470 MtrunA17_Chr3g0101131 41.463 123 62 4 183 300 406 523 6.35e-17 84.0
Msa0505470 MtrunA17_Chr5g0418191 50.360 278 129 5 185 457 140 413 2.32e-81 259
Msa0505470 MtrunA17_Chr7g0218081 40.288 417 190 11 41 431 95 478 1.15e-80 260
Msa0505470 MtrunA17_Chr7g0218081 47.727 88 41 2 183 269 401 484 1.57e-15 79.3
Msa0505470 MtrunA17_Chr7g0218081 46.154 91 35 2 363 453 228 304 3.71e-15 78.2
Msa0505470 MtrunA17_Chr4g0042831 51.695 236 78 6 191 425 140 340 5.04e-73 236
Msa0505470 MtrunA17_Chr7g0263531 51.064 235 110 2 193 422 186 420 3.56e-72 236
Msa0505470 MtrunA17_Chr7g0263531 50.000 76 37 1 197 271 362 437 6.60e-16 80.1
Msa0505470 MtrunA17_Chr5g0447701 41.111 270 131 5 183 442 80 331 1.02e-57 196
Msa0505470 MtrunA17_Chr3g0079691 61.594 138 50 1 290 427 425 559 9.94e-47 173
Msa0505470 MtrunA17_Chr3g0079691 42.437 238 95 8 60 259 110 343 3.27e-38 148
Msa0505470 MtrunA17_Chr3g0079691 54.430 79 34 2 363 440 280 357 7.39e-16 80.5
Msa0505470 MtrunA17_Chr3g0079691 54.545 77 26 3 183 256 486 556 1.70e-15 79.3
Msa0505470 MtrunA17_Chr4g0074001 41.152 243 125 5 195 425 185 421 3.76e-46 168
Msa0505470 MtrunA17_Chr4g0074001 53.731 67 30 1 195 260 358 424 2.50e-16 81.6
Msa0505470 MtrunA17_Chr7g0249311 47.594 187 81 3 321 491 350 535 8.79e-43 161
Msa0505470 MtrunA17_Chr7g0249311 72.059 68 19 0 192 259 175 242 1.49e-26 114
Msa0505470 MtrunA17_Chr7g0249311 35.948 153 74 6 279 427 112 244 1.10e-14 77.0
Msa0505470 MtrunA17_Chr7g0249301 79.268 82 17 0 344 425 273 354 1.36e-41 153
Msa0505470 MtrunA17_Chr7g0249301 69.841 63 19 0 197 259 63 125 3.30e-23 101
Msa0505470 MtrunA17_Chr7g0249301 50.667 75 32 2 183 256 283 353 3.65e-15 77.4
Msa0505470 MtrunA17_Chr7g0249301 38.889 126 52 4 330 454 45 146 1.02e-14 75.9
Msa0505470 MtrunA17_Chr5g0447711 32.174 230 136 4 197 426 84 293 6.65e-35 133
Msa0505470 MtrunA17_Chr1g0188941 66.667 81 27 0 344 424 32 112 1.96e-34 125
Msa0505470 MtrunA17_Chr1g0188941 56.667 60 25 1 196 254 51 110 4.17e-17 77.4
Msa0505470 MtrunA17_Chr8g0335811 59.783 92 36 1 328 419 120 210 2.72e-31 120
Msa0505470 MtrunA17_Chr8g0335811 52.113 71 29 2 182 251 144 210 1.53e-16 79.0
Msa0505470 MtrunA17_Chr5g0432071 47.857 140 57 4 170 299 78 211 2.85e-30 117
Msa0505470 MtrunA17_Chr5g0432071 48.148 81 38 2 363 440 104 183 8.88e-16 76.3
Msa0505470 MtrunA17_Chr3g0129361 64.865 74 26 0 346 419 127 200 4.31e-29 114
Msa0505470 MtrunA17_Chr3g0129361 47.887 71 32 2 182 251 134 200 1.18e-14 73.2
Msa0505470 MtrunA17_Chr8g0383351 64.000 75 26 1 346 419 142 216 1.28e-27 110
Msa0505470 MtrunA17_Chr8g0383351 56.140 57 24 1 196 251 160 216 1.01e-14 73.9
Msa0505470 MtrunA17_Chr2g0294231 62.338 77 29 0 347 423 187 263 1.16e-26 111
Msa0505470 MtrunA17_Chr2g0294231 46.512 86 45 1 196 280 203 288 6.03e-17 82.8
Msa0505470 MtrunA17_Chr1g0150801 61.842 76 28 1 344 419 84 158 1.68e-26 105
Msa0505470 MtrunA17_Chr1g0150801 47.222 72 33 2 182 252 92 159 8.40e-16 75.1
Msa0505470 MtrunA17_Chr5g0418781 57.647 85 35 1 342 425 103 187 2.68e-26 108
Msa0505470 MtrunA17_Chr5g0418781 40.196 102 56 2 151 251 83 180 1.36e-13 71.2
Msa0505470 MtrunA17_Chr7g0270191 49.091 110 50 2 347 452 129 236 2.80e-26 108
Msa0505470 MtrunA17_Chr7g0270191 49.383 81 36 2 196 275 145 221 3.69e-16 79.3
Msa0505470 MtrunA17_Chr5g0443131 62.667 75 28 0 349 423 143 217 5.47e-26 108
Msa0505470 MtrunA17_Chr5g0443131 53.030 66 30 1 196 260 157 222 2.83e-14 73.9
Msa0505470 MtrunA17_Chr4g0051881 61.333 75 29 0 349 423 164 238 9.65e-26 108
Msa0505470 MtrunA17_Chr4g0051881 46.316 95 49 2 196 289 178 271 1.32e-18 87.0
Msa0505470 MtrunA17_Chr1g0194481 52.747 91 43 0 347 437 142 232 1.13e-25 107
Msa0505470 MtrunA17_Chr1g0194481 44.444 81 40 2 183 258 141 221 2.80e-15 77.0
Msa0505470 MtrunA17_Chr8g0386241 56.250 80 35 0 342 421 82 161 1.17e-25 103
Msa0505470 MtrunA17_Chr8g0386241 50.000 72 31 2 182 252 93 160 2.24e-17 80.1
Msa0505470 MtrunA17_Chr7g0224801 54.321 81 37 0 354 434 84 164 8.50e-25 100
Msa0505470 MtrunA17_Chr7g0224801 50.000 72 31 2 182 252 83 150 1.23e-15 74.7
Msa0505470 MtrunA17_Chr4g0060271 53.846 78 35 1 346 422 238 315 3.69e-24 106
Msa0505470 MtrunA17_Chr4g0060271 50.000 62 29 2 196 255 255 316 5.03e-13 71.6
Msa0505470 MtrunA17_Chr2g0288871 54.430 79 35 1 345 422 287 365 4.21e-24 105
Msa0505470 MtrunA17_Chr2g0288871 37.615 109 53 3 161 254 257 365 2.36e-13 72.4
Msa0505470 MtrunA17_Chr8g0383251 54.795 73 33 0 350 422 95 167 4.71e-24 99.4
Msa0505470 MtrunA17_Chr8g0383251 45.946 74 35 2 182 254 98 167 7.40e-14 70.1
Msa0505470 MtrunA17_Chr4g0051181 55.128 78 34 1 347 423 227 304 6.93e-24 104
Msa0505470 MtrunA17_Chr4g0051181 52.381 63 28 2 196 256 243 305 8.71e-15 76.6
Msa0505470 MtrunA17_Chr3g0099641 46.591 88 46 1 336 422 224 311 7.69e-24 104
Msa0505470 MtrunA17_Chr3g0099641 41.975 81 45 2 197 275 252 332 2.13e-13 72.4
Msa0505470 MtrunA17_Chr4g0075201 54.430 79 35 1 345 422 249 327 9.63e-24 104
Msa0505470 MtrunA17_Chr4g0075201 38.889 90 49 3 173 256 240 329 6.78e-13 70.9
Msa0505470 MtrunA17_Chr2g0322391 54.430 79 35 1 345 422 331 409 1.27e-23 104
Msa0505470 MtrunA17_Chr2g0322391 41.463 82 46 2 196 275 349 430 1.07e-12 70.5
Msa0505470 MtrunA17_Chr4g0068541 53.488 86 40 0 347 432 192 277 2.10e-23 102
Msa0505470 MtrunA17_Chr4g0068541 52.000 75 34 2 196 268 208 282 7.00e-15 76.6
Msa0505470 MtrunA17_Chr7g0270831 43.925 107 45 2 347 452 200 292 2.18e-23 102
Msa0505470 MtrunA17_Chr7g0270831 44.000 75 40 2 197 269 217 291 1.80e-13 72.4
Msa0505470 MtrunA17_Chr7g0248721 54.023 87 39 1 333 419 111 196 3.04e-23 97.8
Msa0505470 MtrunA17_Chr7g0248721 56.897 58 23 2 196 252 141 197 4.28e-13 68.6
Msa0505470 MtrunA17_Chr3g0129321 54.667 75 34 0 349 423 104 178 4.04e-23 97.4
Msa0505470 MtrunA17_Chr3g0129321 45.333 75 36 2 182 255 108 178 1.51e-13 69.7
Msa0505470 MtrunA17_Chr7g0216891 54.667 75 33 1 346 419 202 276 1.78e-22 100
Msa0505470 MtrunA17_Chr7g0216891 44.304 79 38 3 196 272 219 293 4.31e-13 71.6
Msa0505470 MtrunA17_Chr4g0025051 44.554 101 55 1 324 423 296 396 6.50e-22 99.4
Msa0505470 MtrunA17_Chr4g0025051 30.216 139 91 3 149 281 284 422 9.19e-13 70.9
Msa0505470 MtrunA17_Chr1g0147881 40.690 145 74 4 281 423 189 323 6.64e-22 97.1
Msa0505470 MtrunA17_Chr1g0147881 51.515 66 30 2 197 260 263 328 2.10e-12 68.6
Msa0505470 MtrunA17_Chr2g0302391 52.564 78 36 1 346 422 194 271 1.10e-21 97.4
Msa0505470 MtrunA17_Chr2g0302391 45.205 73 38 2 197 267 212 284 1.02e-11 67.0
Msa0505470 MtrunA17_Chr4g0053281 51.765 85 37 2 344 427 250 331 1.39e-21 95.9
Msa0505470 MtrunA17_Chr4g0053281 49.254 67 32 2 197 261 267 333 1.78e-14 74.7
Msa0505470 MtrunA17_Chr4g0025061 51.250 80 38 1 345 423 342 421 2.43e-21 97.4
Msa0505470 MtrunA17_Chr4g0025061 33.333 135 84 3 153 281 313 447 3.00e-15 78.6
Msa0505470 MtrunA17_Chr3g0136961 54.795 73 30 3 350 419 123 195 1.29e-20 92.4
Msa0505470 MtrunA17_Chr3g0136961 50.877 57 26 2 197 251 139 195 8.58e-14 72.0
Msa0505470 MtrunA17_Chr1g0189391 56.338 71 30 1 350 419 84 154 1.31e-20 93.2
Msa0505470 MtrunA17_Chr1g0189391 51.515 66 29 3 196 259 97 161 5.20e-12 67.0
Msa0505470 MtrunA17_Chr5g0401821 53.165 79 36 1 344 421 180 258 1.97e-20 91.3
Msa0505470 MtrunA17_Chr5g0401821 47.761 67 33 2 197 261 200 266 2.14e-13 70.5
Msa0505470 MtrunA17_Chr7g0238921 64.912 57 20 0 363 419 124 180 2.37e-20 92.0
Msa0505470 MtrunA17_Chr7g0238921 59.649 57 22 1 196 251 124 180 1.51e-14 74.7
Msa0505470 MtrunA17_Chr6g0485431 54.667 75 33 1 349 422 140 214 2.78e-20 92.4
Msa0505470 MtrunA17_Chr6g0485431 43.421 76 41 2 187 260 145 220 5.54e-13 70.5
Msa0505470 MtrunA17_Chr4g0071521 47.368 95 44 3 343 436 228 317 1.33e-19 89.7
Msa0505470 MtrunA17_Chr4g0071521 46.032 63 32 2 197 257 246 308 2.87e-11 64.7
Msa0505470 MtrunA17_Chr4g0001361 45.714 105 41 5 361 449 160 264 2.04e-19 89.4
Msa0505470 MtrunA17_Chr4g0001361 53.333 60 26 2 197 254 163 222 1.93e-15 77.4
Msa0505470 MtrunA17_Chr6g0468181 67.241 58 19 0 212 269 18 75 1.73e-18 81.3
Msa0505470 MtrunA17_Chr2g0333851 54.688 64 28 1 361 423 167 230 2.83e-18 85.9
Msa0505470 MtrunA17_Chr2g0333851 50.000 60 28 2 197 254 170 229 5.52e-14 72.8
Msa0505470 MtrunA17_Chr1g0150271 39.048 105 49 4 361 455 99 198 4.21e-18 84.0
Msa0505470 MtrunA17_Chr1g0150271 48.333 60 29 2 197 254 102 161 1.63e-12 67.8
Msa0505470 MtrunA17_Chr1g0150281 47.945 73 35 2 350 419 125 197 8.89e-18 84.0
Msa0505470 MtrunA17_Chr1g0150281 46.479 71 36 2 197 265 141 211 2.70e-13 70.5
Msa0505470 MtrunA17_Chr1g0184691 50.000 78 38 1 343 419 273 350 1.12e-17 84.7
Msa0505470 MtrunA17_Chr1g0184691 54.237 59 25 2 197 253 294 352 3.90e-13 70.9
Msa0505470 MtrunA17_Chr4g0024391 32.090 134 88 2 325 457 191 322 6.96e-17 83.2
Msa0505470 MtrunA17_Chr3g0139021 48.101 79 40 1 343 420 294 372 1.39e-16 81.6
Msa0505470 MtrunA17_Chr2g0284321 44.211 95 50 2 340 433 14 106 2.91e-16 77.8
Msa0505470 MtrunA17_Chr2g0284321 36.937 111 66 3 197 303 36 146 2.81e-13 69.3
Msa0505470 MtrunA17_Chr8g0379461 46.667 75 39 1 364 437 77 151 3.49e-16 78.2
Msa0505470 MtrunA17_Chr8g0379461 36.559 93 55 3 197 287 77 167 3.02e-12 66.6
Msa0505470 MtrunA17_Chr7g0228941 46.154 78 41 1 343 419 32 109 4.25e-16 74.7
Msa0505470 MtrunA17_Chr7g0228941 39.744 78 41 3 180 251 32 109 7.36e-12 62.8
Msa0505470 MtrunA17_Chr2g0289181 56.250 64 26 2 197 258 15 78 1.24e-15 76.3
Msa0505470 MtrunA17_Chr2g0289181 54.098 61 27 1 364 423 15 75 6.28e-15 74.3
Msa0505470 MtrunA17_Chr2g0319961 50.794 63 30 1 364 425 81 143 2.11e-15 76.3
Msa0505470 MtrunA17_Chr7g0270051 46.575 73 38 1 364 435 54 126 3.79e-15 75.5
Msa0505470 MtrunA17_Chr7g0270051 45.679 81 34 3 197 275 54 126 2.48e-13 70.1
Msa0505470 MtrunA17_Chr1g0202461 42.353 85 47 2 344 427 243 326 6.51e-15 76.6
Msa0505470 MtrunA17_Chr8g0348311 45.349 86 45 2 364 447 156 241 1.34e-14 75.1
Msa0505470 MtrunA17_Chr8g0387501 45.946 74 39 1 362 434 128 201 2.70e-14 73.2
Msa0505470 MtrunA17_Chr8g0387501 48.485 66 30 3 197 260 130 193 2.82e-12 67.4
Msa0505470 MtrunA17_Chr2g0293481 47.692 65 33 1 364 427 268 332 1.96e-13 72.4
Msa0505470 MtrunA17_Chr7g0248691 46.667 75 38 2 364 436 155 229 3.36e-13 70.9
Msa0505470 MtrunA17_Chr7g0248691 27.848 237 147 8 109 338 65 284 1.56e-11 65.9
Msa0505470 MtrunA17_Chr1g0188961 59.615 52 20 1 383 434 3 53 5.31e-13 63.9
Msa0505470 MtrunA17_Chr1g0188971 60.000 45 18 0 339 383 38 82 2.38e-12 62.8
Msa0505470 MtrunA17_Chr3g0126391 51.724 58 24 2 196 249 133 190 3.88e-12 67.8
Msa0505470 MtrunA17_Chr3g0126391 49.153 59 27 1 362 417 132 190 1.61e-11 65.9
Msa0505470 MtrunA17_Chr8g0387981 51.724 58 24 2 196 249 132 189 4.82e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505470 AT2G38470.1 43.728 558 226 19 1 510 1 518 1.53e-111 341
Msa0505470 AT5G07100.1 48.361 366 90 10 62 425 28 296 5.22e-94 288
Msa0505470 AT2G03340.1 45.729 398 181 10 39 427 108 479 1.93e-92 291
Msa0505470 AT2G03340.1 60.000 70 27 1 363 432 250 318 1.47e-19 92.0
Msa0505470 AT4G26640.7 44.186 430 172 12 51 432 1 410 1.13e-90 287
Msa0505470 AT4G26640.2 43.023 430 192 11 40 432 37 450 1.61e-90 288
Msa0505470 AT2G30250.1 45.330 439 173 15 1 423 1 388 9.74e-90 280
Msa0505470 AT2G30250.1 55.385 65 28 1 197 260 329 393 9.15e-16 79.7
Msa0505470 AT4G26640.5 56.911 246 93 4 195 432 34 274 1.90e-86 271
Msa0505470 AT4G26640.6 56.911 246 93 4 195 432 34 274 1.90e-86 271
Msa0505470 AT4G26640.4 56.911 246 93 4 195 432 34 274 1.90e-86 271
Msa0505470 AT4G26640.3 56.911 246 93 4 195 432 34 274 1.90e-86 271
Msa0505470 AT4G26640.1 56.911 246 93 4 195 432 138 378 1.25e-85 273
Msa0505470 AT5G07100.2 60.000 240 42 7 189 425 15 203 9.50e-84 258
Msa0505470 AT5G07100.4 60.000 240 42 7 189 425 15 203 9.50e-84 258
Msa0505470 AT5G07100.5 60.000 240 42 7 189 425 15 203 9.50e-84 258
Msa0505470 AT5G07100.3 60.000 240 42 7 189 425 15 203 9.50e-84 258
Msa0505470 AT1G13960.1 42.787 409 166 12 39 422 103 468 3.82e-82 265
Msa0505470 AT1G13960.1 52.273 88 27 2 356 429 208 294 7.92e-19 89.7
Msa0505470 AT1G13960.2 54.032 248 87 4 195 422 75 315 5.79e-79 251
Msa0505470 AT1G13960.2 52.273 88 27 2 356 429 55 141 6.47e-19 89.0
Msa0505470 AT3G01080.1 55.263 228 74 4 195 422 166 365 4.02e-72 236
Msa0505470 AT3G01080.2 55.263 228 74 4 195 422 204 403 4.75e-72 236
Msa0505470 AT4G26440.1 36.580 462 186 14 67 476 88 494 3.45e-71 237
Msa0505470 AT2G04880.2 45.635 252 110 4 190 425 105 345 1.67e-62 211
Msa0505470 AT2G04880.1 43.173 271 113 5 190 425 105 369 3.51e-59 203
Msa0505470 AT2G37260.3 45.349 258 100 6 193 421 82 327 4.31e-58 196
Msa0505470 AT2G37260.2 45.349 258 100 6 193 421 80 325 5.31e-58 196
Msa0505470 AT2G37260.1 45.349 258 100 6 193 421 162 407 2.83e-57 197
Msa0505470 AT4G30935.1 42.735 234 120 8 197 425 169 393 5.79e-49 175
Msa0505470 AT4G30935.1 40.179 112 61 3 197 307 332 438 4.91e-16 80.9
Msa0505470 AT4G12020.6 46.305 203 95 3 191 383 463 661 1.12e-45 172
Msa0505470 AT4G12020.6 52.459 61 28 1 362 422 467 526 3.36e-12 70.1
Msa0505470 AT4G12020.8 46.305 203 95 3 191 383 463 661 1.12e-45 172
Msa0505470 AT4G12020.8 52.459 61 28 1 362 422 467 526 3.36e-12 70.1
Msa0505470 AT4G12020.1 46.305 203 95 3 191 383 463 661 1.22e-45 172
Msa0505470 AT4G12020.1 52.459 61 28 1 362 422 467 526 3.40e-12 70.1
Msa0505470 AT4G12020.9 46.305 203 95 3 191 383 463 661 1.22e-45 172
Msa0505470 AT4G12020.9 52.459 61 28 1 362 422 467 526 3.40e-12 70.1
Msa0505470 AT4G12020.7 46.305 203 95 3 191 383 463 661 1.28e-45 172
Msa0505470 AT4G12020.7 52.459 61 28 1 362 422 467 526 3.49e-12 70.1
Msa0505470 AT4G12020.2 46.305 203 95 3 191 383 463 661 1.32e-45 172
Msa0505470 AT4G12020.2 52.459 61 28 1 362 422 467 526 3.46e-12 70.1
Msa0505470 AT4G12020.10 46.305 203 95 3 191 383 463 661 1.35e-45 172
Msa0505470 AT4G12020.10 52.459 61 28 1 362 422 467 526 3.46e-12 70.1
Msa0505470 AT4G12020.3 46.305 203 95 3 191 383 463 661 1.39e-45 172
Msa0505470 AT4G12020.3 52.459 61 28 1 362 422 467 526 3.61e-12 69.7
Msa0505470 AT4G12020.11 46.305 203 95 3 191 383 463 661 1.60e-45 172
Msa0505470 AT4G12020.11 52.459 61 28 1 362 422 467 526 4.57e-12 69.3
Msa0505470 AT4G12020.4 46.305 203 95 3 191 383 463 661 1.60e-45 172
Msa0505470 AT4G12020.4 52.459 61 28 1 362 422 467 526 3.68e-12 69.7
Msa0505470 AT4G12020.5 46.305 203 95 3 191 383 396 594 1.88e-45 172
Msa0505470 AT4G12020.5 52.459 61 28 1 362 422 400 459 3.98e-12 69.7
Msa0505470 AT5G56270.1 89.024 82 9 0 344 425 468 549 2.62e-45 169
Msa0505470 AT5G56270.1 39.013 223 103 7 67 259 117 336 4.79e-30 124
Msa0505470 AT5G56270.1 55.844 77 25 3 183 256 478 548 3.11e-16 82.4
Msa0505470 AT5G56270.1 59.677 62 24 1 363 424 273 333 6.01e-16 81.3
Msa0505470 AT2G44745.1 67.105 76 25 0 344 419 126 201 1.96e-31 121
Msa0505470 AT2G44745.1 52.113 71 29 2 182 251 135 201 1.50e-16 79.3
Msa0505470 AT4G18170.1 53.846 104 42 1 326 423 129 232 6.64e-29 117
Msa0505470 AT4G18170.1 47.436 78 36 2 183 255 155 232 1.88e-15 77.8
Msa0505470 AT4G39410.1 64.474 76 27 0 344 419 204 279 2.34e-28 115
Msa0505470 AT4G39410.1 42.000 100 48 4 182 280 213 303 4.36e-15 76.6
Msa0505470 AT1G29860.1 63.415 82 29 1 347 427 120 201 1.85e-27 112
Msa0505470 AT1G29860.1 58.333 60 24 1 196 254 136 195 3.71e-15 76.3
Msa0505470 AT1G55600.1 60.494 81 32 0 342 422 286 366 3.21e-27 115
Msa0505470 AT1G55600.1 54.430 79 30 2 184 256 290 368 6.65e-17 84.0
Msa0505470 AT5G49520.1 64.198 81 28 1 347 426 205 285 5.17e-27 113
Msa0505470 AT5G49520.1 51.389 72 34 1 196 266 221 292 5.95e-16 80.1
Msa0505470 AT1G69310.4 58.140 86 35 1 342 426 126 211 8.26e-27 110
Msa0505470 AT1G69310.4 47.222 72 33 2 185 251 132 203 5.79e-13 70.1
Msa0505470 AT1G69310.2 58.140 86 35 1 342 426 126 211 8.26e-27 110
Msa0505470 AT1G69310.2 47.222 72 33 2 185 251 132 203 5.79e-13 70.1
Msa0505470 AT1G69310.1 58.140 86 35 1 342 426 126 211 8.26e-27 110
Msa0505470 AT1G69310.1 47.222 72 33 2 185 251 132 203 5.79e-13 70.1
Msa0505470 AT1G64000.1 58.750 80 33 0 340 419 91 170 1.58e-26 107
Msa0505470 AT1G64000.1 56.897 58 24 1 196 252 114 171 7.00e-16 76.6
Msa0505470 AT3G01970.1 56.471 85 37 0 350 434 52 136 2.05e-26 105
Msa0505470 AT3G01970.1 48.193 83 36 3 182 261 55 133 1.55e-14 71.2
Msa0505470 AT4G04450.2 40.769 130 64 2 337 465 172 289 6.14e-26 110
Msa0505470 AT4G04450.2 45.455 77 39 3 197 271 199 274 7.92e-14 73.9
Msa0505470 AT5G26170.1 60.000 70 28 0 350 419 100 169 1.35e-25 103
Msa0505470 AT5G26170.1 47.887 71 32 2 182 251 103 169 1.88e-16 77.8
Msa0505470 AT5G13080.1 61.111 72 28 0 350 421 54 125 1.70e-25 102
Msa0505470 AT5G13080.1 51.389 72 30 2 182 252 57 124 1.73e-17 79.7
Msa0505470 AT3G01080.3 69.697 66 19 1 195 260 204 268 1.83e-25 107
Msa0505470 AT3G01080.3 55.224 67 29 1 363 429 205 270 1.10e-15 78.6
Msa0505470 AT5G41570.1 59.211 76 31 0 344 419 79 154 2.60e-25 103
Msa0505470 AT5G41570.1 40.404 99 50 3 159 252 61 155 1.41e-16 78.2
Msa0505470 AT4G04450.1 40.769 130 64 2 337 465 266 383 2.99e-25 109
Msa0505470 AT4G04450.1 45.455 77 39 3 197 271 293 368 1.20e-13 73.9
Msa0505470 AT5G46350.1 57.500 80 34 0 349 428 169 248 3.51e-25 106
Msa0505470 AT5G46350.1 41.346 104 54 3 186 284 169 270 7.56e-15 76.3
Msa0505470 AT5G15130.2 48.077 104 39 2 346 448 168 257 4.67e-25 108
Msa0505470 AT5G15130.2 33.333 114 70 3 161 272 150 259 6.88e-13 71.2
Msa0505470 AT5G15130.1 48.077 104 39 2 346 448 210 299 5.18e-25 108
Msa0505470 AT5G15130.1 33.333 114 70 3 161 272 192 301 7.30e-13 71.2
Msa0505470 AT2G47260.1 59.211 76 31 0 347 422 158 233 1.06e-24 105
Msa0505470 AT2G47260.1 33.594 128 80 2 167 293 149 272 1.20e-13 72.8
Msa0505470 AT5G64810.1 59.155 71 29 0 350 420 97 167 1.30e-24 101
Msa0505470 AT5G64810.1 33.835 133 66 5 120 251 55 166 6.21e-14 70.9
Msa0505470 AT2G46130.1 57.143 77 33 0 343 419 10 86 2.36e-24 98.2
Msa0505470 AT2G46130.1 58.621 58 23 1 196 252 30 87 9.80e-16 73.6
Msa0505470 AT1G68150.1 53.409 88 37 2 337 423 212 296 4.29e-24 104
Msa0505470 AT1G68150.1 41.667 108 55 3 197 296 236 343 1.45e-15 79.0
Msa0505470 AT4G22070.4 55.696 79 34 1 345 422 279 357 9.91e-24 105
Msa0505470 AT4G22070.4 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0505470 AT4G22070.3 55.696 79 34 1 345 422 279 357 9.91e-24 105
Msa0505470 AT4G22070.3 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0505470 AT4G22070.2 55.696 79 34 1 345 422 279 357 9.91e-24 105
Msa0505470 AT4G22070.2 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0505470 AT4G22070.1 55.696 79 34 1 345 422 279 357 9.91e-24 105
Msa0505470 AT4G22070.1 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0505470 AT1G62300.1 55.696 79 34 1 345 422 294 372 9.95e-24 105
Msa0505470 AT1G62300.1 31.724 145 89 4 116 254 232 372 1.70e-13 73.6
Msa0505470 AT1G18860.1 52.564 78 36 1 346 422 222 299 2.46e-22 100
Msa0505470 AT1G18860.1 50.820 61 28 2 196 254 239 299 7.74e-12 68.2
Msa0505470 AT4G01720.1 55.844 77 33 1 347 422 223 299 2.79e-22 100
Msa0505470 AT4G01720.1 50.820 61 28 2 196 254 239 299 1.39e-12 70.5
Msa0505470 AT1G69310.3 54.651 86 34 2 342 426 126 207 4.65e-22 96.7
Msa0505470 AT2G23320.1 51.899 79 34 2 344 421 224 299 1.09e-20 93.2
Msa0505470 AT2G23320.1 56.140 57 23 2 197 251 241 297 6.23e-13 70.1
Msa0505470 AT4G24240.1 49.438 89 44 1 343 430 261 349 1.52e-20 93.6
Msa0505470 AT4G24240.1 56.140 57 23 2 197 251 282 338 1.35e-13 72.8
Msa0505470 AT4G31550.1 56.410 78 30 2 344 420 230 304 2.00e-20 92.8
Msa0505470 AT4G31550.1 57.895 57 22 2 197 251 247 303 8.54e-14 72.8
Msa0505470 AT4G31550.2 56.410 78 30 2 344 420 229 303 2.01e-20 92.8
Msa0505470 AT4G31550.2 57.895 57 22 2 197 251 246 302 8.61e-14 72.8
Msa0505470 AT3G62340.1 55.263 76 34 0 347 422 102 177 2.13e-20 91.7
Msa0505470 AT3G62340.1 48.000 75 34 2 186 255 104 178 3.47e-14 73.6
Msa0505470 AT2G24570.1 57.692 78 29 2 343 419 226 300 2.87e-20 92.0
Msa0505470 AT2G24570.1 57.895 57 22 2 197 251 244 300 7.71e-14 73.2
Msa0505470 AT2G46130.2 53.247 77 32 1 343 419 10 82 1.02e-19 84.7
Msa0505470 AT2G46130.2 53.448 58 22 2 196 252 30 83 3.23e-11 60.5
Msa0505470 AT2G21900.1 50.667 75 34 1 352 423 95 169 2.19e-19 87.0
Msa0505470 AT2G21900.1 31.915 141 81 4 147 273 53 192 5.39e-14 71.2
Msa0505470 AT5G28650.1 51.948 77 36 1 344 419 243 319 5.35e-19 88.6
Msa0505470 AT5G28650.1 48.438 64 31 2 197 258 263 326 1.18e-11 66.6
Msa0505470 AT1G80840.1 50.000 70 34 1 361 429 144 213 6.37e-19 87.8
Msa0505470 AT1G80840.1 50.000 60 28 2 197 254 147 206 2.40e-13 71.2
Msa0505470 AT4G31800.2 50.725 69 32 2 356 422 103 171 1.72e-18 85.5
Msa0505470 AT4G31800.2 42.667 75 41 2 197 269 112 186 1.50e-13 70.9
Msa0505470 AT2G30590.1 52.564 78 36 1 343 419 293 370 1.86e-18 87.8
Msa0505470 AT2G30590.1 54.237 59 25 2 197 253 314 372 7.76e-13 70.5
Msa0505470 AT3G04670.1 51.948 77 36 1 344 419 243 319 2.07e-18 87.0
Msa0505470 AT3G04670.1 50.000 64 30 2 197 258 263 326 2.01e-12 68.9
Msa0505470 AT4G31800.1 50.725 69 32 2 356 422 168 236 3.20e-18 85.9
Msa0505470 AT4G31800.1 42.667 75 41 2 197 269 177 251 2.65e-13 71.2
Msa0505470 AT5G43290.1 61.017 59 23 0 361 419 112 170 3.71e-18 85.1
Msa0505470 AT5G43290.1 62.069 58 21 1 195 251 113 170 1.66e-15 77.4
Msa0505470 AT2G25000.2 50.000 62 30 1 362 422 102 163 1.60e-17 82.0
Msa0505470 AT2G25000.2 46.032 63 32 2 197 257 104 166 8.61e-12 65.5
Msa0505470 AT2G25000.4 50.000 62 30 1 362 422 102 163 1.60e-17 82.0
Msa0505470 AT2G25000.4 46.032 63 32 2 197 257 104 166 8.61e-12 65.5
Msa0505470 AT2G25000.3 50.000 62 30 1 362 422 124 185 3.43e-17 81.6
Msa0505470 AT2G25000.3 46.032 63 32 2 197 257 126 188 1.29e-11 65.5
Msa0505470 AT2G25000.1 50.000 62 30 1 362 422 145 206 4.61e-17 81.6
Msa0505470 AT2G25000.1 46.032 63 32 2 197 257 147 209 1.83e-11 65.1
Msa0505470 AT4G23550.1 42.553 94 49 2 352 440 129 222 6.53e-17 82.0
Msa0505470 AT1G69810.2 45.570 79 41 2 346 422 128 206 8.65e-17 82.0
Msa0505470 AT1G69810.1 45.570 79 41 2 346 422 186 264 1.06e-16 82.4
Msa0505470 AT4G01250.1 46.512 86 44 2 364 447 129 214 1.26e-15 78.2
Msa0505470 AT1G29280.1 51.667 60 28 1 364 422 75 134 6.29e-15 75.5
Msa0505470 AT1G29280.1 47.619 63 31 2 197 257 75 137 5.47e-12 66.6
Msa0505470 AT3G58710.1 36.170 141 77 4 294 429 4 136 7.79e-15 75.1
Msa0505470 AT3G58710.1 50.000 60 28 2 197 254 72 131 8.84e-11 63.2
Msa0505470 AT5G45260.1 33.824 136 77 4 141 272 1162 1288 6.33e-14 75.5
Msa0505470 AT3G58710.2 50.746 67 30 2 364 429 71 135 7.10e-14 72.4
Msa0505470 AT3G58710.2 50.000 60 28 2 197 254 71 130 9.07e-11 63.2
Msa0505470 AT5G52830.1 42.353 85 47 2 344 427 147 230 9.22e-14 73.2
Msa0505470 AT5G52830.1 33.077 130 69 6 195 316 164 283 8.12e-12 67.0
Msa0505470 AT2G34830.1 37.755 98 52 2 339 427 183 280 1.60e-13 72.8
Msa0505470 AT2G34830.2 37.755 98 52 2 339 427 192 289 1.61e-13 73.2
Msa0505470 AT1G30650.1 49.206 63 31 1 364 425 218 280 5.89e-13 71.2
Msa0505470 AT5G45050.4 47.692 65 33 1 364 427 1042 1106 5.95e-12 68.9
Msa0505470 AT2G40740.1 50.847 59 25 2 196 250 173 231 5.96e-12 67.0
Msa0505470 AT5G45050.2 47.692 65 33 1 364 427 1153 1217 6.03e-12 68.9
Msa0505470 AT5G45050.1 47.692 65 33 1 364 427 1181 1245 6.27e-12 68.9
Msa0505470 AT2G40740.3 50.847 59 25 2 196 250 182 240 7.60e-12 66.6
Msa0505470 AT2G46400.1 33.333 96 60 2 341 432 82 177 1.73e-11 65.5
Msa0505470 AT2G46400.1 46.552 58 27 2 196 249 104 161 7.17e-11 63.5
Msa0505470 AT5G24110.1 46.032 63 30 2 191 249 108 170 3.41e-11 64.7

Find 119 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTCAAATCATTT+TGG 0.095807 3_4:-50975083 Msa0505470:CDS
AAGAGAGGTGCAGGAGAAAT+AGG 0.210851 3_4:+50976632 None:intergenic
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3_4:+50976729 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3_4:+50976735 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.267267 3_4:+50975260 None:intergenic
TGAAACATTGTTGTTGTTGA+TGG 0.270698 3_4:+50973238 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3_4:+50976664 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3_4:-50974615 Msa0505470:CDS
CGGAGGTAGTACCTTGGATT+TGG 0.284286 3_4:+50974570 None:intergenic
GGATACAATTGGAGAAAATA+TGG 0.306925 3_4:-50975311 Msa0505470:CDS
TCCTTCCAAGCTCAACCAGC+TGG 0.315203 3_4:-50975791 Msa0505470:CDS
AACAATGTTTCACTTCATAA+TGG 0.317177 3_4:-50973227 Msa0505470:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3_4:+50976665 None:intergenic
TTGGTTTGTTAAGGTGAAAA+AGG 0.342355 3_4:+50976891 None:intergenic
TTTGGTCGGTTGGAGAGTTA+AGG 0.355015 3_4:+50976753 None:intergenic
AAATGAAATTCAAATGGATT+TGG 0.360393 3_4:-50975060 Msa0505470:CDS
ATTGAAGGGTTGGTTTGTTA+AGG 0.368889 3_4:+50976882 None:intergenic
GAGCAGACTTCTCATAAATC+TGG 0.371375 3_4:-50974990 Msa0505470:CDS
TTGAATCTTTCCTATCTTGA+AGG 0.379314 3_4:-50973073 None:intergenic
GAAGGAGAAAAGAGAGGTGC+AGG 0.384828 3_4:+50976623 None:intergenic
CTCTTGTTAGCCACAGGCTT+AGG 0.389420 3_4:+50975149 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3_4:-50975880 Msa0505470:CDS
CGTGTTAATAATATTCTTAG+AGG 0.394717 3_4:-50973134 Msa0505470:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.396252 3_4:+50973375 None:intergenic
AAAATAATAAATTGAAGGGT+TGG 0.397409 3_4:+50976872 None:intergenic
GTTGTTGTTGATGGAATTGT+TGG 0.400906 3_4:+50973247 None:intergenic
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3_4:+50976548 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3_4:-50974735 Msa0505470:intron
CACTTGATGATGAGATCTTT+CGG 0.406857 3_4:+50976718 None:intergenic
GAAAATGAGGGAATATCATT+AGG 0.411282 3_4:-50974711 Msa0505470:CDS
CATCATCTGATCTTCTACTA+AGG 0.429029 3_4:+50975333 None:intergenic
AAGGAACATTCCTTCAAGAT+AGG 0.432156 3_4:+50973063 None:intergenic
GGAGGAGGGTGATGAAATGA+AGG 0.434263 3_4:+50976934 None:intergenic
GAATGAGAGAAGGGTGAAGA+AGG 0.438325 3_4:+50976913 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3_4:+50975899 None:intergenic
ATGTTCCTCTTGTTAGCCAC+AGG 0.444294 3_4:+50975143 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3_4:-50974614 Msa0505470:CDS
CCAAAATGATTTGAAGGAGG+AGG 0.450538 3_4:+50975083 None:intergenic
GTTGTTTGAACAACAACTCT+TGG 0.451286 3_4:+50974663 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3_4:-50975322 Msa0505470:CDS
ATCTTCTACAGGCTCCTCCT+TGG 0.451413 3_4:+50973106 None:intergenic
GGATCATTTGCTAATAATGA+AGG 0.453023 3_4:-50975890 Msa0505470:CDS
AAGTGTTGTCGGATCAAAAC+AGG 0.453220 3_4:-50976700 Msa0505470:CDS
GAGAATAGAAGGTGAAAATG+AGG 0.457475 3_4:-50974724 Msa0505470:CDS
ATAGTTGTTTGCATTGGTAG+TGG 0.460987 3_4:+50973287 None:intergenic
TCATTTCCAAAATGATTTGA+AGG 0.461658 3_4:+50975077 None:intergenic
GACTTACATGAGAAGAGTTA+AGG 0.463339 3_4:+50976540 None:intergenic
GGTATAGAAAAGTATGAAGA+AGG 0.468052 3_4:+50976605 None:intergenic
GTAGTGGTTTGTTGATAGAA+TGG 0.468055 3_4:+50973303 None:intergenic
CCTTCCAAGCTCAACCAGCT+GGG 0.469628 3_4:-50975790 Msa0505470:CDS
GCAGGAGAAATAGGAAGAGA+TGG 0.474048 3_4:+50976641 None:intergenic
TTCATTATTAGCAAATGATC+CGG 0.475551 3_4:+50975892 None:intergenic
CCCAGCTGGTTGAGCTTGGA+AGG 0.483118 3_4:+50975790 None:intergenic
TTTCCACTTCCACGTGGTGC+TGG 0.483190 3_4:+50973326 None:intergenic
GAAACCCAGCTGGTTGAGCT+TGG 0.484107 3_4:+50975786 None:intergenic
GTTCCAGCACCACGTGGAAG+TGG 0.484366 3_4:-50973329 Msa0505470:CDS
GAAGGAGAAACTTGATGAGA+TGG 0.486771 3_4:+50975808 None:intergenic
TTGTCGGATCAAAACAGGTC+TGG 0.486786 3_4:-50976695 Msa0505470:CDS
GACATCGATATTCTAGATGA+TGG 0.490460 3_4:-50974636 Msa0505470:CDS
ATCTCATCATCAAGTGTTGT+CGG 0.493343 3_4:-50976711 Msa0505470:CDS
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3_4:-50974597 Msa0505470:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3_4:-50975864 Msa0505470:CDS
GAGAAGGGTGAAGAAGGAGG+AGG 0.502324 3_4:+50976919 None:intergenic
CATTGTTCTGCATCATCTCA+TGG 0.504790 3_4:+50973195 None:intergenic
AGAAGGGTGAAGAAGGAGGA+GGG 0.505648 3_4:+50976920 None:intergenic
AATGGATTTGGTTGCTACAC+CGG 0.505910 3_4:-50975048 Msa0505470:CDS
GAGAATTCATCGATATCGAT+TGG 0.509402 3_4:-50975026 Msa0505470:CDS
AAGGAGGTCAGAGAAGAAAG+AGG 0.512892 3_4:+50976772 None:intergenic
TGAGAGAAGGGTGAAGAAGG+AGG 0.515433 3_4:+50976916 None:intergenic
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3_4:-50974598 Msa0505470:CDS
GATGGAATTGTTGGCACTTG+TGG 0.521173 3_4:+50973256 None:intergenic
GAGGGAATATCATTAGGAGT+TGG 0.535237 3_4:-50974705 Msa0505470:CDS
TTGTTCATAGTTGTTTGCAT+TGG 0.537129 3_4:+50973281 None:intergenic
AGTTCAGAAAGAGAGAAGCC+AGG 0.537553 3_4:+50976581 None:intergenic
CTACTAAGGATTTGAACTTG+TGG 0.539306 3_4:+50975347 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3_4:+50973385 None:intergenic
AGAATAGAAGGTGAAAATGA+GGG 0.546664 3_4:-50974723 Msa0505470:CDS
TCACTAGTAGAATTACTCTC+TGG 0.547481 3_4:+50975422 None:intergenic
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3_4:+50976647 None:intergenic
TACTACAAGTGCACAAACCC+AGG 0.561370 3_4:-50973437 Msa0505470:CDS
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3_4:+50975905 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.566337 3_4:+50975029 None:intergenic
CTTAGTAGAAGATCAGATGA+TGG 0.566844 3_4:-50975332 Msa0505470:CDS
GCAGTGATAACAACGTATGA+AGG 0.567628 3_4:-50973368 Msa0505470:CDS
GATGCAGAACAATGGATTCA+CGG 0.571686 3_4:-50973186 Msa0505470:CDS
GTCGAAGATTGAAACCCAGC+TGG 0.571777 3_4:+50975776 None:intergenic
AGTTGGAAATAGAACTGTGA+GGG 0.575571 3_4:-50974688 Msa0505470:CDS
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3_4:-50975911 Msa0505470:CDS
TTTCCAAAATGATTTGAAGG+AGG 0.580319 3_4:+50975080 None:intergenic
CTAGTAGAATTACTCTCTGG+TGG 0.580327 3_4:+50975425 None:intergenic
GGAGAAATAGGAAGAGATGG+AGG 0.585157 3_4:+50976644 None:intergenic
AGAGAATGTCAAGGCAGAAG+AGG 0.589262 3_4:-50975834 Msa0505470:CDS
TTCTAGATGATGGATACAGA+TGG 0.589347 3_4:-50974626 Msa0505470:CDS
TATGAAGAAGGAGAAAAGAG+AGG 0.593576 3_4:+50976617 None:intergenic
CATGAGATGATGCAGAACAA+TGG 0.596348 3_4:-50973194 Msa0505470:CDS
CAGACTTCTCATAAATCTGG+TGG 0.596367 3_4:-50974987 Msa0505470:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3_4:-50974581 Msa0505470:intron
AAAGTTGAGAGGGGTTTAGA+CGG 0.602739 3_4:-50975212 Msa0505470:CDS
AGGTCATTGAATTATAGAGA+AGG 0.607485 3_4:+50976795 None:intergenic
GGTCGGTTGGAGAGTTAAGG+AGG 0.609088 3_4:+50976756 None:intergenic
TAGTAGAATTACTCTCTGGT+GGG 0.614330 3_4:+50975426 None:intergenic
TATGGACAGAAACAAGTGAA+AGG 0.621665 3_4:-50975293 Msa0505470:CDS
CTAAGCCTGTGGCTAACAAG+AGG 0.622068 3_4:-50975148 Msa0505470:CDS
TATTCTTAGAGGTAGAGCCA+AGG 0.629340 3_4:-50973123 Msa0505470:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3_4:+50976668 None:intergenic
ATACCAACAGGGATGGAACA+TGG 0.636942 3_4:-50975483 Msa0505470:intron
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3_4:+50976667 None:intergenic
TCTTAGAGGTAGAGCCAAGG+AGG 0.646721 3_4:-50973120 Msa0505470:CDS
TCATAATCATCCTAAGCCTG+TGG 0.651078 3_4:-50975159 Msa0505470:CDS
GGAAAAGCAAGAGAATGTCA+AGG 0.656877 3_4:-50975843 Msa0505470:CDS
AGTGAACAAAACAACAAGAG+TGG 0.657175 3_4:-50975404 Msa0505470:CDS
ATTACTGAGATAGTTTACAA+AGG 0.670402 3_4:-50975185 Msa0505470:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3_4:-50974623 Msa0505470:CDS
CATGATGTTCCAGCACCACG+TGG 0.686601 3_4:-50973335 Msa0505470:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3_4:+50976775 None:intergenic
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3_4:+50976666 None:intergenic
TCAGAAAGAGAGAAGCCAGG+AGG 0.725467 3_4:+50976584 None:intergenic
GAATGGTTTCCACTTCCACG+TGG 0.728410 3_4:+50973320 None:intergenic
GAGTTGGAAATAGAACTGTG+AGG 0.763784 3_4:-50974689 Msa0505470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAAATAATAAATTGAA+GGG + chr3_4:50973149-50973168 None:intergenic 10.0%
!!! ATTATATACTCTTTTTTATA+TGG - chr3_4:50973838-50973857 Msa0505470:intron 10.0%
!!! TTATATACTCTTTTTTATAT+GGG - chr3_4:50973839-50973858 Msa0505470:intron 10.0%
!! AAAGAATAATTACTAAATTT+GGG + chr3_4:50973903-50973922 None:intergenic 10.0%
!! AAAAGAATAATTACTAAATT+TGG + chr3_4:50973904-50973923 None:intergenic 10.0%
!!! ATGTATTTTTTTTTTTCATT+TGG - chr3_4:50974459-50974478 Msa0505470:intron 10.0%
!!! TTTTATCATATCAAATAAAA+TGG - chr3_4:50975140-50975159 Msa0505470:CDS 10.0%
!! AAATAATATGTAACTATATA+TGG + chr3_4:50975234-50975253 None:intergenic 10.0%
!!! ATTAATTTTATTAATATTGC+AGG - chr3_4:50975268-50975287 Msa0505470:CDS 10.0%
!!! AAAATTTTGTCAATTAAATT+GGG + chr3_4:50975471-50975490 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3_4:50975506-50975525 Msa0505470:intron 10.0%
!! CATTTAATAATAATAATTGA+GGG + chr3_4:50975923-50975942 None:intergenic 10.0%
!! ACATTTAATAATAATAATTG+AGG + chr3_4:50975924-50975943 None:intergenic 10.0%
!! TCAATTATTATTATTAAATG+TGG - chr3_4:50975923-50975942 Msa0505470:intron 10.0%
!! GTGAAAAAATAATAAATTGA+AGG + chr3_4:50973150-50973169 None:intergenic 15.0%
!! ATATAAGAATTAAATCGATA+TGG + chr3_4:50973646-50973665 None:intergenic 15.0%
!!! ATCGATTTAATTCTTATATA+TGG - chr3_4:50973647-50973666 Msa0505470:intron 15.0%
!! ATTTAATTCTTATATATGGT+TGG - chr3_4:50973651-50973670 Msa0505470:intron 15.0%
!!! TGAACATTTAATTTTAATCA+TGG - chr3_4:50973726-50973745 Msa0505470:intron 15.0%
!! CATAGACATAAATATAAAAA+GGG + chr3_4:50974034-50974053 None:intergenic 15.0%
!! ACATAGACATAAATATAAAA+AGG + chr3_4:50974035-50974054 None:intergenic 15.0%
!!! CAAAATTTTGTCAATTAAAT+TGG + chr3_4:50975472-50975491 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr3_4:50975571-50975590 Msa0505470:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr3_4:50975572-50975591 Msa0505470:intron 15.0%
!! GCAGAAAAAAAAAAAAAAAA+AGG + chr3_4:50975817-50975836 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTCTGCTT+TGG - chr3_4:50975819-50975838 Msa0505470:CDS 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3_4:50976551-50976570 Msa0505470:CDS 15.0%
!! AAAATAATAAATTGAAGGGT+TGG + chr3_4:50973145-50973164 None:intergenic 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3_4:50973818-50973837 None:intergenic 20.0%
!!! TTTTGGAAATGAAATTCAAA+TGG - chr3_4:50974948-50974967 Msa0505470:CDS 20.0%
!!! AAATGAAATTCAAATGGATT+TGG - chr3_4:50974954-50974973 Msa0505470:CDS 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr3_4:50975531-50975550 Msa0505470:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr3_4:50975641-50975660 Msa0505470:intron 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3_4:50975740-50975759 None:intergenic 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3_4:50975986-50976005 None:intergenic 20.0%
!! TACACAAAATTAACAAAACT+AGG - chr3_4:50975991-50976010 Msa0505470:intron 20.0%
!! CATTGAATAATTAATGTATC+CGG - chr3_4:50976088-50976107 Msa0505470:intron 20.0%
!!! TAAGCAAAAAACAACTTTTT+AGG + chr3_4:50976152-50976171 None:intergenic 20.0%
!! CAATGTCTAAATATTCTTAT+TGG - chr3_4:50976391-50976410 Msa0505470:intron 20.0%
!! ATATTCTTATTGGTCAAATT+TGG - chr3_4:50976401-50976420 Msa0505470:intron 20.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3_4:50976513-50976532 None:intergenic 20.0%
! AGTGAGAATTATGATCAATT+TGG + chr3_4:50973548-50973567 None:intergenic 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3_4:50973754-50973773 Msa0505470:intron 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3_4:50974125-50974144 None:intergenic 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3_4:50974150-50974169 Msa0505470:intron 25.0%
!! TGAGTCTTGTGAATTTAAAT+TGG + chr3_4:50974288-50974307 None:intergenic 25.0%
! TTACCGACAAAAATTAAAGA+CGG - chr3_4:50974346-50974365 Msa0505470:intron 25.0%
!!! TTTCCGTCTTTAATTTTTGT+CGG + chr3_4:50974352-50974371 None:intergenic 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3_4:50974783-50974802 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3_4:50974784-50974803 None:intergenic 25.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3_4:50974792-50974811 Msa0505470:intron 25.0%
! ATTACTGAGATAGTTTACAA+AGG - chr3_4:50974829-50974848 Msa0505470:intron 25.0%
! TCATTTCCAAAATGATTTGA+AGG + chr3_4:50974940-50974959 None:intergenic 25.0%
!!! AGTAAAAACTCACCATTTTT+TGG + chr3_4:50975088-50975107 None:intergenic 25.0%
!! CCACAATATAACAAATTTTG+AGG + chr3_4:50975197-50975216 None:intergenic 25.0%
!!! CCTCAAAATTTGTTATATTG+TGG - chr3_4:50975194-50975213 Msa0505470:CDS 25.0%
! CTATATATGGATTTCAAATG+TGG + chr3_4:50975221-50975240 None:intergenic 25.0%
!! TTTTGTCAATTAAATTGGGA+CGG + chr3_4:50975467-50975486 None:intergenic 25.0%
! TGTATAAATAAAGGAGAAAG+TGG - chr3_4:50975515-50975534 Msa0505470:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr3_4:50975530-50975549 Msa0505470:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+AGG - chr3_4:50975619-50975638 Msa0505470:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr3_4:50975640-50975659 Msa0505470:intron 25.0%
!! TTTTGTGCTAATATGTTAGT+AGG - chr3_4:50975884-50975903 Msa0505470:CDS 25.0%
!!! TAGGTATTTTGATAACCTAA+AGG - chr3_4:50976010-50976029 Msa0505470:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr3_4:50976162-50976181 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr3_4:50976162-50976181 Msa0505470:intron 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3_4:50976303-50976322 Msa0505470:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3_4:50976787-50976806 Msa0505470:exon 25.0%
! CGTGTTAATAATATTCTTAG+AGG - chr3_4:50976880-50976899 Msa0505470:five_prime_UTR 25.0%
!! TTGGTTTGTTAAGGTGAAAA+AGG + chr3_4:50973126-50973145 None:intergenic 30.0%
AGGTCATTGAATTATAGAGA+AGG + chr3_4:50973222-50973241 None:intergenic 30.0%
! GGTATAGAAAAGTATGAAGA+AGG + chr3_4:50973412-50973431 None:intergenic 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3_4:50973774-50973793 Msa0505470:intron 30.0%
TATGTCTATGTGATTCTAGT+TGG - chr3_4:50974044-50974063 Msa0505470:intron 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3_4:50974124-50974143 Msa0505470:intron 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3_4:50974134-50974153 Msa0505470:intron 30.0%
! GTTACATACATTTTGAACTG+TGG + chr3_4:50974266-50974285 None:intergenic 30.0%
! GAGACGAAATTCATGTTTTT+CGG - chr3_4:50974423-50974442 Msa0505470:intron 30.0%
AAACTTTCATGTATACCAAC+AGG - chr3_4:50974519-50974538 Msa0505470:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3_4:50974520-50974539 Msa0505470:intron 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3_4:50974703-50974722 Msa0505470:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3_4:50974793-50974812 None:intergenic 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3_4:50974791-50974810 Msa0505470:intron 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3_4:50974793-50974812 Msa0505470:intron 30.0%
TTTCCAAAATGATTTGAAGG+AGG + chr3_4:50974937-50974956 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3_4:50975279-50975298 Msa0505470:CDS 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3_4:50975291-50975310 Msa0505470:CDS 30.0%
GAAAATGAGGGAATATCATT+AGG - chr3_4:50975303-50975322 Msa0505470:CDS 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3_4:50975719-50975738 None:intergenic 30.0%
ATCTAACCTATAAATGTGAC+CGG + chr3_4:50976110-50976129 None:intergenic 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3_4:50976308-50976327 None:intergenic 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3_4:50976369-50976388 None:intergenic 30.0%
! ATGTGATGTCTAAGACTAAA+GGG - chr3_4:50976483-50976502 Msa0505470:intron 30.0%
TTGTTCATAGTTGTTTGCAT+TGG + chr3_4:50976736-50976755 None:intergenic 30.0%
! TGAAACATTGTTGTTGTTGA+TGG + chr3_4:50976779-50976798 None:intergenic 30.0%
AAAAATGAGTCATCTTCTAC+AGG + chr3_4:50976922-50976941 None:intergenic 30.0%
GTGAAAAAGGAATGAGAGAA+GGG + chr3_4:50973113-50973132 None:intergenic 35.0%
!! ATTGAAGGGTTGGTTTGTTA+AGG + chr3_4:50973135-50973154 None:intergenic 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3_4:50973282-50973301 None:intergenic 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3_4:50973299-50973318 None:intergenic 35.0%
! ATCTCATCATCAAGTGTTGT+CGG - chr3_4:50973303-50973322 Msa0505470:CDS 35.0%
TATGAAGAAGGAGAAAAGAG+AGG + chr3_4:50973400-50973419 None:intergenic 35.0%
! TCATACTTTTCTATACCTCC+TGG - chr3_4:50973415-50973434 Msa0505470:CDS 35.0%
GACTTACATGAGAAGAGTTA+AGG + chr3_4:50973477-50973496 None:intergenic 35.0%
! ACATACATTTTGAACTGTGG+TGG + chr3_4:50974263-50974282 None:intergenic 35.0%
TAGTAGAATTACTCTCTGGT+GGG + chr3_4:50974591-50974610 None:intergenic 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3_4:50974595-50974614 None:intergenic 35.0%
AGTGAACAAAACAACAAGAG+TGG - chr3_4:50974610-50974629 Msa0505470:CDS 35.0%
CTACTAAGGATTTGAACTTG+TGG + chr3_4:50974670-50974689 None:intergenic 35.0%
CATCATCTGATCTTCTACTA+AGG + chr3_4:50974684-50974703 None:intergenic 35.0%
CTTAGTAGAAGATCAGATGA+TGG - chr3_4:50974682-50974701 Msa0505470:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3_4:50974692-50974711 Msa0505470:CDS 35.0%
TATGGACAGAAACAAGTGAA+AGG - chr3_4:50974721-50974740 Msa0505470:CDS 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3_4:50974757-50974776 None:intergenic 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3_4:50974988-50975007 None:intergenic 35.0%
GAGAATTCATCGATATCGAT+TGG - chr3_4:50974988-50975007 Msa0505470:CDS 35.0%
ATGAACCTGATGCCAAAAAA+TGG - chr3_4:50975073-50975092 Msa0505470:CDS 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3_4:50975290-50975309 Msa0505470:CDS 35.0%
AGTTGGAAATAGAACTGTGA+GGG - chr3_4:50975326-50975345 Msa0505470:CDS 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3_4:50975354-50975373 None:intergenic 35.0%
GACATCGATATTCTAGATGA+TGG - chr3_4:50975378-50975397 Msa0505470:CDS 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3_4:50975388-50975407 Msa0505470:CDS 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3_4:50975400-50975419 Msa0505470:CDS 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3_4:50975416-50975435 Msa0505470:CDS 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3_4:50975417-50975436 Msa0505470:CDS 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3_4:50975433-50975452 Msa0505470:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr3_4:50975654-50975673 Msa0505470:intron 35.0%
ATGTATCCGGTCACATTTAT+AGG - chr3_4:50976101-50976120 Msa0505470:intron 35.0%
GAAAAAAATTGTACTCCCTC+CGG + chr3_4:50976184-50976203 None:intergenic 35.0%
CACGTGATTGGTAAAGTATA+GGG + chr3_4:50976333-50976352 None:intergenic 35.0%
TGCATGCATTAGAGAAATGT+GGG + chr3_4:50976430-50976449 None:intergenic 35.0%
ATGCATGCATTAGAGAAATG+TGG + chr3_4:50976431-50976450 None:intergenic 35.0%
ACATTTCTCTAATGCATGCA+TGG - chr3_4:50976430-50976449 Msa0505470:intron 35.0%
CATTTCTCTAATGCATGCAT+GGG - chr3_4:50976431-50976450 Msa0505470:intron 35.0%
!! CTTTAGTCTTAGACATCACA+TGG + chr3_4:50976484-50976503 None:intergenic 35.0%
! CATGTGATGTCTAAGACTAA+AGG - chr3_4:50976482-50976501 Msa0505470:intron 35.0%
!! GTAGTGGTTTGTTGATAGAA+TGG + chr3_4:50976714-50976733 None:intergenic 35.0%
! ATAGTTGTTTGCATTGGTAG+TGG + chr3_4:50976730-50976749 None:intergenic 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3_4:50976770-50976789 None:intergenic 35.0%
GGTGAAAAAGGAATGAGAGA+AGG + chr3_4:50973114-50973133 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3_4:50973274-50973293 None:intergenic 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3_4:50973278-50973297 None:intergenic 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3_4:50973288-50973307 None:intergenic 40.0%
! AAGTGTTGTCGGATCAAAAC+AGG - chr3_4:50973314-50973333 Msa0505470:CDS 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3_4:50973350-50973369 None:intergenic 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3_4:50973351-50973370 None:intergenic 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3_4:50973352-50973371 None:intergenic 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3_4:50973353-50973372 None:intergenic 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3_4:50973469-50973488 None:intergenic 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3_4:50974103-50974122 Msa0505470:intron 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3_4:50974118-50974137 None:intergenic 40.0%
GGAAAAGCAAGAGAATGTCA+AGG - chr3_4:50974171-50974190 Msa0505470:intron 40.0%
GAAGGAGAAACTTGATGAGA+TGG + chr3_4:50974209-50974228 None:intergenic 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3_4:50974524-50974543 Msa0505470:intron 40.0%
CTAGTAGAATTACTCTCTGG+TGG + chr3_4:50974592-50974611 None:intergenic 40.0%
AAAGTTGAGAGGGGTTTAGA+CGG - chr3_4:50974802-50974821 Msa0505470:intron 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3_4:50974855-50974874 Msa0505470:intron 40.0%
CCAAAATGATTTGAAGGAGG+AGG + chr3_4:50974934-50974953 None:intergenic 40.0%
! CCTCCTCCTTCAAATCATTT+TGG - chr3_4:50974931-50974950 Msa0505470:intron 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3_4:50974966-50974985 Msa0505470:CDS 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3_4:50975024-50975043 Msa0505470:CDS 40.0%
CAGACTTCTCATAAATCTGG+TGG - chr3_4:50975027-50975046 Msa0505470:CDS 40.0%
!!! ACTCACCATTTTTTGGCATC+AGG + chr3_4:50975081-50975100 None:intergenic 40.0%
GAGGGAATATCATTAGGAGT+TGG - chr3_4:50975309-50975328 Msa0505470:CDS 40.0%
GAGTTGGAAATAGAACTGTG+AGG - chr3_4:50975325-50975344 Msa0505470:CDS 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3_4:50975391-50975410 Msa0505470:CDS 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3_4:50975399-50975418 Msa0505470:CDS 40.0%
TGTCAATTAAATTGGGACGG+AGG + chr3_4:50975464-50975483 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr3_4:50975655-50975674 Msa0505470:intron 40.0%
GGAGTCAAAGAACTCTATGA+TGG + chr3_4:50975796-50975815 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr3_4:50976166-50976185 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr3_4:50976165-50976184 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr3_4:50976165-50976184 Msa0505470:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr3_4:50976166-50976185 Msa0505470:intron 40.0%
GTGATTGGTAAAGTATAGGG+TGG + chr3_4:50976330-50976349 None:intergenic 40.0%
GCACGTGATTGGTAAAGTAT+AGG + chr3_4:50976334-50976353 None:intergenic 40.0%
CTAATTCGATTGCACGTGAT+TGG + chr3_4:50976345-50976364 None:intergenic 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3_4:50976642-50976661 None:intergenic 40.0%
GCAGTGATAACAACGTATGA+AGG - chr3_4:50976646-50976665 Msa0505470:CDS 40.0%
CATTGTTCTGCATCATCTCA+TGG + chr3_4:50976822-50976841 None:intergenic 40.0%
CATGAGATGATGCAGAACAA+TGG - chr3_4:50976820-50976839 Msa0505470:five_prime_UTR 40.0%
! GATGCAGAACAATGGATTCA+CGG - chr3_4:50976828-50976847 Msa0505470:five_prime_UTR 40.0%
TATTCTTAGAGGTAGAGCCA+AGG - chr3_4:50976891-50976910 Msa0505470:five_prime_UTR 40.0%
GAATGAGAGAAGGGTGAAGA+AGG + chr3_4:50973104-50973123 None:intergenic 45.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3_4:50973245-50973264 None:intergenic 45.0%
TTTGGTCGGTTGGAGAGTTA+AGG + chr3_4:50973264-50973283 None:intergenic 45.0%
TTGTCGGATCAAAACAGGTC+TGG - chr3_4:50973319-50973338 Msa0505470:CDS 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3_4:50973349-50973368 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3_4:50973370-50973389 None:intergenic 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3_4:50973373-50973392 None:intergenic 45.0%
GCAGGAGAAATAGGAAGAGA+TGG + chr3_4:50973376-50973395 None:intergenic 45.0%
! AAGAGAGGTGCAGGAGAAAT+AGG + chr3_4:50973385-50973404 None:intergenic 45.0%
AGTTCAGAAAGAGAGAAGCC+AGG + chr3_4:50973436-50973455 None:intergenic 45.0%
!! AAAGTGCTTAAAGAGTGCCC+CGG - chr3_4:50973990-50974009 Msa0505470:intron 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3_4:50974112-50974131 None:intergenic 45.0%
AGAGAATGTCAAGGCAGAAG+AGG - chr3_4:50974180-50974199 Msa0505470:intron 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3_4:50974531-50974550 Msa0505470:intron 45.0%
ATGTTCCTCTTGTTAGCCAC+AGG + chr3_4:50974874-50974893 None:intergenic 45.0%
TTTAATTACTCCCTCCGTCC+CGG + chr3_4:50975676-50975695 None:intergenic 45.0%
! GGAGTATATGGGTTGCCTTT+AGG + chr3_4:50976028-50976047 None:intergenic 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3_4:50976577-50976596 Msa0505470:CDS 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3_4:50976597-50976616 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3_4:50976598-50976617 None:intergenic 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3_4:50976607-50976626 None:intergenic 45.0%
GATGGAATTGTTGGCACTTG+TGG + chr3_4:50976761-50976780 None:intergenic 45.0%
GGAGGAGGGTGATGAAATGA+AGG + chr3_4:50973083-50973102 None:intergenic 50.0%
AGAAGGGTGAAGAAGGAGGA+GGG + chr3_4:50973097-50973116 None:intergenic 50.0%
TGAGAGAAGGGTGAAGAAGG+AGG + chr3_4:50973101-50973120 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3_4:50973242-50973261 None:intergenic 50.0%
! GAAGGAGAAAAGAGAGGTGC+AGG + chr3_4:50973394-50973413 None:intergenic 50.0%
TCAGAAAGAGAGAAGCCAGG+AGG + chr3_4:50973433-50973452 None:intergenic 50.0%
!! AAGTGCTTAAAGAGTGCCCC+GGG - chr3_4:50973991-50974010 Msa0505470:intron 50.0%
AAATGTTAACGAGTGCCCCC+GGG + chr3_4:50974011-50974030 None:intergenic 50.0%
GAAATGTTAACGAGTGCCCC+CGG + chr3_4:50974012-50974031 None:intergenic 50.0%
GTCGAAGATTGAAACCCAGC+TGG + chr3_4:50974241-50974260 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3_4:50974537-50974556 None:intergenic 50.0%
CTCTTGTTAGCCACAGGCTT+AGG + chr3_4:50974868-50974887 None:intergenic 50.0%
CTAAGCCTGTGGCTAACAAG+AGG - chr3_4:50974866-50974885 Msa0505470:intron 50.0%
CGGAGGTAGTACCTTGGATT+TGG + chr3_4:50975447-50975466 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr3_4:50975659-50975678 Msa0505470:intron 50.0%
! TGTGACCGGAGGGAGTATAT+GGG + chr3_4:50976039-50976058 None:intergenic 50.0%
! ATGTGACCGGAGGGAGTATA+TGG + chr3_4:50976040-50976059 None:intergenic 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3_4:50976632-50976651 None:intergenic 50.0%
GAATGGTTTCCACTTCCACG+TGG + chr3_4:50976697-50976716 None:intergenic 50.0%
TCTTAGAGGTAGAGCCAAGG+AGG - chr3_4:50976894-50976913 Msa0505470:five_prime_UTR 50.0%
ATCTTCTACAGGCTCCTCCT+TGG + chr3_4:50976911-50976930 None:intergenic 50.0%
GAGAAGGGTGAAGAAGGAGG+AGG + chr3_4:50973098-50973117 None:intergenic 55.0%
GGTCGGTTGGAGAGTTAAGG+AGG + chr3_4:50973261-50973280 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG - chr3_4:50973861-50973880 Msa0505470:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG - chr3_4:50973862-50973881 Msa0505470:intron 55.0%
!! TTGCTTAAAGAGTGCCCCGG+GGG + chr3_4:50973880-50973899 None:intergenic 55.0%
!! GTTGCTTAAAGAGTGCCCCG+GGG + chr3_4:50973881-50973900 None:intergenic 55.0%
!! GGTTGCTTAAAGAGTGCCCC+GGG + chr3_4:50973882-50973901 None:intergenic 55.0%
!! GGGTTGCTTAAAGAGTGCCC+CGG + chr3_4:50973883-50973902 None:intergenic 55.0%
!! AGTGCTTAAAGAGTGCCCCG+GGG - chr3_4:50973992-50974011 Msa0505470:intron 55.0%
AATGTTAACGAGTGCCCCCG+GGG + chr3_4:50974010-50974029 None:intergenic 55.0%
TCCTTCCAAGCTCAACCAGC+TGG - chr3_4:50974223-50974242 Msa0505470:intron 55.0%
CCTTCCAAGCTCAACCAGCT+GGG - chr3_4:50974224-50974243 Msa0505470:intron 55.0%
GAAACCCAGCTGGTTGAGCT+TGG + chr3_4:50974231-50974250 None:intergenic 55.0%
TTGGGACGGAGGTAGTACCT+TGG + chr3_4:50975453-50975472 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr3_4:50975663-50975682 Msa0505470:intron 55.0%
GGCAACCCATATACTCCCTC+CGG - chr3_4:50976031-50976050 Msa0505470:intron 55.0%
CATGATGTTCCAGCACCACG+TGG - chr3_4:50976679-50976698 Msa0505470:CDS 55.0%
TTTCCACTTCCACGTGGTGC+TGG + chr3_4:50976691-50976710 None:intergenic 55.0%
CTTGTTAACGAGTGCCCCCG+GGG - chr3_4:50973863-50973882 Msa0505470:intron 60.0%
!! GTGCTTAAAGAGTGCCCCGG+GGG - chr3_4:50973993-50974012 Msa0505470:intron 60.0%
CCCAGCTGGTTGAGCTTGGA+AGG + chr3_4:50974227-50974246 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr3_4:50975662-50975681 Msa0505470:intron 60.0%
GTTCCAGCACCACGTGGAAG+TGG - chr3_4:50976685-50976704 Msa0505470:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 50973076 50976960 50973076 ID=Msa0505470;Name=Msa0505470
chr3_4 mRNA 50973076 50976960 50973076 ID=Msa0505470-mRNA-1;Parent=Msa0505470;Name=Msa0505470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=159|1|0.8|1|1|1|5|0|511
chr3_4 exon 50973076 50973463 50973076 ID=Msa0505470-mRNA-1:exon:11083;Parent=Msa0505470-mRNA-1
chr3_4 exon 50974582 50974746 50974582 ID=Msa0505470-mRNA-1:exon:11082;Parent=Msa0505470-mRNA-1
chr3_4 exon 50974942 50975495 50974942 ID=Msa0505470-mRNA-1:exon:11081;Parent=Msa0505470-mRNA-1
chr3_4 exon 50975760 50975933 50975760 ID=Msa0505470-mRNA-1:exon:11080;Parent=Msa0505470-mRNA-1
chr3_4 exon 50976547 50976960 50976547 ID=Msa0505470-mRNA-1:exon:11079;Parent=Msa0505470-mRNA-1
chr3_4 five_prime_UTR 50976802 50976960 50976802 ID=Msa0505470-mRNA-1:five_prime_utr;Parent=Msa0505470-mRNA-1
chr3_4 CDS 50976547 50976801 50976547 ID=Msa0505470-mRNA-1:cds;Parent=Msa0505470-mRNA-1
chr3_4 CDS 50975760 50975933 50975760 ID=Msa0505470-mRNA-1:cds;Parent=Msa0505470-mRNA-1
chr3_4 CDS 50974942 50975495 50974942 ID=Msa0505470-mRNA-1:cds;Parent=Msa0505470-mRNA-1
chr3_4 CDS 50974582 50974746 50974582 ID=Msa0505470-mRNA-1:cds;Parent=Msa0505470-mRNA-1
chr3_4 CDS 50973076 50973463 50973076 ID=Msa0505470-mRNA-1:cds;Parent=Msa0505470-mRNA-1
Gene Sequence

>Msa0505470

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAACTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTCGGATCAAAACAGGTCTGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTGCACCTCTCTTTTCTCCTTCTTCATACTTTTCTATACCTCCTGGCTTCTCTCTTTCTGAACTTCTTGATTCTCCTGTTCTCCTTAACTCTTCTCATATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCGACCACCACAGTTCAAAATGGATGGAACATGGTGAAAACTGAAAACTCTTCTTCAATGCAAAGTTTCCCACCAGAGAGTAATTCTACTAGTGAACAAAACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAAATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGACGGACAAATTACTGAGATAGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACATAAACTCGATGTCTTCATCGTCGTCGTCACTTGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATTGGAGATGATGAATTTGAGCAGACTTCTCATAAATCTGGTGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATGCCAAAAAATGGAGAATAGAAGGTGAAAATGAGGGAATATCATTAGGAGTTGGAAATAGAACTGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATCGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGTAAACACAATCATGATGTTCCAGCACCACGTGGAAGTGGAAACCATTCTATCAACAAACCACTACCAATGCAAACAACTATGAACAATACCACAAGTGCCAACAATTCCATCAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACCATGAGATGATGCAGAACAATGGATTCACGGTTGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTCTTAGAGGTAGAGCCAAGGAGGAGCCTGTAGAAGATGACTCATTTTTTGAATCTTTCCTATCTTGA
Protein sequence

>Msa0505470

MTSSFFSDLLNSPTDQNLKDTERSHHQVLSDQNRSGLPPKFKSTPPPSLPISPAPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSTTTVQNGWNMVKTENSSSMQSFPPESNSTSEQNNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNINSMSSSSSSLANPPPSNHFGNEIQMDLVATPENSSISIGDDEFEQTSHKSGGDHDQFCEDEPDAKKWRIEGENEGISLGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTMNNTTSANNSINNNNVSLHNGFFNHEMMQNNGFTVDSYMNMNQQRVNNILRGRAKEEPVEDDSFFESFLS*