AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435320 MtrunA17_Chr6g0458931 97.143 455 13 0 1 455 1 455 0.0 920
Msa1435320 MtrunA17_Chr7g0230011 84.065 433 69 0 23 455 11 443 0.0 728
Msa1435320 MtrunA17_Chr2g0331721 75.439 456 105 2 1 455 12 461 0.0 704
Msa1435320 MtrunA17_Chr6g0459001 76.160 474 72 1 23 455 3 476 0.0 700
Msa1435320 MtrunA17_Chr6g0459021 75.670 448 105 1 8 455 4 447 0.0 687
Msa1435320 MtrunA17_Chr6g0458921 78.089 429 91 2 28 455 2 428 0.0 663
Msa1435320 MtrunA17_Chr6g0459031 76.347 427 100 1 30 455 2 428 0.0 654
Msa1435320 MtrunA17_Chr8g0376991 66.898 432 143 0 24 455 5 436 0.0 641
Msa1435320 MtrunA17_Chr2g0328081 74.769 432 103 2 25 455 2 428 0.0 623
Msa1435320 MtrunA17_Chr6g0459011 80.153 393 78 0 58 450 1 393 0.0 616
Msa1435320 MtrunA17_Chr4g0057851 67.718 412 133 0 42 453 10 421 0.0 607
Msa1435320 MtrunA17_Chr3g0122921 65.297 438 134 1 18 455 9 428 0.0 605
Msa1435320 MtrunA17_Chr5g0422741 59.545 440 175 1 16 455 3 439 0.0 548
Msa1435320 MtrunA17_Chr1g0198531 58.986 434 174 1 22 455 8 437 0.0 537
Msa1435320 MtrunA17_Chr1g0198541 58.508 429 178 0 27 455 9 437 0.0 532
Msa1435320 MtrunA17_Chr3g0077651 53.057 458 210 3 2 455 13 469 5.32e-175 498
Msa1435320 MtrunA17_Chr2g0281341 38.426 432 254 6 34 454 87 517 7.98e-97 300
Msa1435320 MtrunA17_Chr3g0143701 37.701 435 257 6 34 455 76 509 4.90e-96 298
Msa1435320 MtrunA17_Chr5g0406331 38.837 430 241 7 34 451 78 497 1.28e-94 295
Msa1435320 MtrunA17_Chr4g0038711 35.332 467 279 7 9 454 35 499 5.03e-94 293
Msa1435320 MtrunA17_Chr5g0406351 35.294 459 277 8 16 455 75 532 1.50e-89 282
Msa1435320 MtrunA17_Chr3g0140761 31.568 472 268 14 24 452 17 476 7.11e-61 206
Msa1435320 MtrunA17_Chr4g0027241 29.526 464 297 10 13 455 6 460 5.37e-60 203
Msa1435320 MtrunA17_Chr8g0387941 28.384 458 299 10 13 455 5 448 6.14e-59 200
Msa1435320 MtrunA17_Chr1g0146491 31.078 473 279 12 19 452 2 466 1.06e-58 199
Msa1435320 MtrunA17_Chr1g0198081 29.754 447 293 9 23 455 40 479 1.36e-56 194
Msa1435320 MtrunA17_Chr1g0206871 31.304 460 258 12 42 452 15 465 8.15e-56 192
Msa1435320 MtrunA17_Chr3g0125091 28.838 482 292 14 12 452 3 474 4.51e-53 185
Msa1435320 MtrunA17_Chr3g0125101 29.375 480 288 16 14 452 5 474 6.90e-53 184
Msa1435320 MtrunA17_Chr4g0037201 29.555 494 277 17 5 452 38 506 9.78e-53 185
Msa1435320 MtrunA17_Chr3g0125081 28.926 484 288 14 12 452 3 473 1.53e-51 181
Msa1435320 MtrunA17_Chr1g0184721 29.754 447 284 14 24 454 5 437 9.90e-50 175
Msa1435320 MtrunA17_Chr1g0146411 28.692 474 287 14 24 453 5 471 3.37e-49 174
Msa1435320 MtrunA17_Chr3g0130641 30.667 450 268 12 42 455 33 474 1.48e-48 173
Msa1435320 MtrunA17_Chr3g0130651 30.254 433 258 11 17 419 11 429 2.20e-48 172
Msa1435320 MtrunA17_Chr3g0103271 28.829 444 266 11 42 445 27 460 8.56e-48 170
Msa1435320 MtrunA17_Chr8g0384661 29.148 446 272 12 42 451 50 487 9.94e-47 168
Msa1435320 MtrunA17_Chr5g0447221 30.337 445 257 14 42 445 29 461 5.47e-46 166
Msa1435320 MtrunA17_Chr3g0103231 28.868 433 266 13 41 439 22 446 2.13e-45 164
Msa1435320 MtrunA17_Chr1g0159761 28.879 464 267 13 18 434 2 449 2.96e-45 164
Msa1435320 MtrunA17_Chr1g0146391 27.273 473 285 14 23 455 1 454 6.05e-45 162
Msa1435320 MtrunA17_Chr3g0140541 26.667 450 288 11 41 453 24 468 1.15e-42 157
Msa1435320 MtrunA17_Chr3g0103211 29.117 419 256 11 41 426 22 432 4.15e-42 155
Msa1435320 MtrunA17_Chr5g0447231 26.582 474 290 14 14 447 5 460 4.65e-40 149
Msa1435320 MtrunA17_Chr3g0140531 24.733 469 314 12 20 454 4 467 1.07e-38 145
Msa1435320 MtrunA17_Chr1g0206831 32.372 312 168 9 170 450 37 336 1.56e-38 142
Msa1435320 MtrunA17_Chr1g0146331 25.110 454 286 12 23 436 9 448 1.74e-38 145
Msa1435320 MtrunA17_Chr2g0293331 25.551 454 283 13 23 436 1 439 2.87e-38 144
Msa1435320 MtrunA17_Chr3g0103221 26.606 436 272 12 41 439 29 453 3.32e-38 144
Msa1435320 MtrunA17_Chr1g0206851 29.014 355 197 12 137 451 35 374 2.11e-36 137
Msa1435320 MtrunA17_Chr4g0058161 25.054 459 326 12 4 455 1 448 5.26e-36 138
Msa1435320 MtrunA17_Chr3g0103251 26.935 323 177 9 170 439 43 359 1.27e-28 116
Msa1435320 MtrunA17_Chr1g0206821 33.846 260 134 8 24 260 12 256 7.72e-26 110
Msa1435320 MtrunA17_Chr1g0206821 31.222 221 119 6 257 452 313 525 1.24e-25 109
Msa1435320 MtrunA17_Chr5g0436281 25.063 399 268 11 70 455 1 381 1.32e-24 105
Msa1435320 MtrunA17_Chr3g0112971 27.034 381 247 13 88 455 72 434 4.89e-23 100
Msa1435320 MtrunA17_Chr3g0105861 24.312 436 292 15 23 445 18 428 3.30e-20 92.4
Msa1435320 MtrunA17_Chr5g0402151 30.824 279 156 7 53 322 11 261 1.06e-19 89.0
Msa1435320 MtrunA17_Chr4g0027261 30.729 192 117 4 273 455 1 185 4.93e-19 84.7
Msa1435320 MtrunA17_Chr8g0361631 21.642 402 280 13 26 418 2 377 3.03e-18 86.7
Msa1435320 MtrunA17_Chr7g0217381 24.163 418 261 15 14 409 7 390 1.51e-17 84.7
Msa1435320 MtrunA17_Chr7g0217401 24.648 426 265 16 32 434 25 417 1.52e-17 84.7
Msa1435320 MtrunA17_Chr8g0361211 23.096 394 245 13 45 417 64 420 8.94e-17 82.4
Msa1435320 MtrunA17_Chr3g0130661 28.652 178 111 2 294 455 1 178 3.02e-16 76.6
Msa1435320 MtrunA17_Chr7g0239011 20.631 412 273 15 25 413 37 417 4.74e-14 73.9
Msa1435320 MtrunA17_Chr3g0090101 24.074 378 247 12 52 416 2 352 6.09e-14 73.2
Msa1435320 MtrunA17_Chr3g0130671 30.049 203 130 4 42 234 39 239 1.40e-13 70.9
Msa1435320 MtrunA17_Chr8g0361641 23.014 365 241 13 66 418 1 337 6.21e-13 70.1
Msa1435320 MtrunA17_Chr1g0199431 23.011 352 223 14 12 342 111 435 7.95e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435320 AT5G40780.1 79.224 438 91 0 18 455 9 446 0.0 743
Msa1435320 AT5G40780.3 80.653 398 77 0 58 455 1 398 0.0 684
Msa1435320 AT5G40780.2 80.653 398 77 0 58 455 1 398 0.0 684
Msa1435320 AT1G48640.1 73.778 450 116 2 6 455 6 453 0.0 679
Msa1435320 AT1G24400.1 75.926 432 104 0 24 455 10 441 0.0 669
Msa1435320 AT1G67640.1 73.973 438 114 0 18 455 4 441 0.0 644
Msa1435320 AT1G61270.1 63.719 441 153 3 9 445 1 438 0.0 588
Msa1435320 AT3G01760.1 64.220 436 146 5 17 445 5 437 0.0 576
Msa1435320 AT1G25530.1 59.674 429 172 1 28 455 12 440 0.0 526
Msa1435320 AT1G71680.1 58.916 443 181 1 14 455 6 448 2.26e-178 506
Msa1435320 AT1G71680.2 60.335 358 141 1 14 370 6 363 2.60e-150 432
Msa1435320 AT1G47670.1 38.889 432 252 6 34 454 85 515 4.66e-96 299
Msa1435320 AT4G35180.1 32.159 454 281 11 3 435 10 457 1.56e-67 223
Msa1435320 AT1G08230.2 31.858 452 282 11 24 455 4 449 1.82e-63 212
Msa1435320 AT1G10010.1 32.135 473 275 12 18 452 5 469 3.22e-63 212
Msa1435320 AT1G10010.2 32.135 473 275 12 18 452 6 470 3.71e-63 212
Msa1435320 AT5G41800.1 28.868 433 278 9 42 455 26 447 4.59e-57 195
Msa1435320 AT1G58360.1 32.121 495 276 17 1 452 1 478 7.54e-57 196
Msa1435320 AT4G35180.2 34.824 313 188 7 3 303 10 318 2.15e-54 185
Msa1435320 AT5G49630.1 30.126 478 272 13 22 452 14 476 4.74e-52 182
Msa1435320 AT5G09220.1 29.075 454 268 12 42 452 45 487 5.26e-49 175
Msa1435320 AT1G44100.1 28.541 473 280 14 26 452 14 474 1.11e-47 171
Msa1435320 AT5G63850.1 28.931 477 273 15 21 452 5 460 4.17e-46 166
Msa1435320 AT1G77380.1 29.333 450 264 14 18 426 4 440 2.42e-45 164
Msa1435320 AT1G08230.3 31.831 355 223 8 114 455 1 349 1.06e-44 160
Msa1435320 AT1G08230.4 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1435320 AT1G08230.6 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1435320 AT1G08230.5 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1435320 AT5G23810.1 28.369 423 259 10 41 426 24 439 6.74e-39 147
Msa1435320 AT5G23810.2 28.438 320 204 8 41 340 24 338 4.78e-26 108
Msa1435320 AT2G39890.2 23.973 438 311 13 28 455 15 440 5.92e-26 110
Msa1435320 AT2G39890.1 23.973 438 311 13 28 455 15 440 5.92e-26 110
Msa1435320 AT3G55740.1 24.612 451 316 14 14 455 2 437 1.73e-24 105
Msa1435320 AT2G36590.1 25.120 418 292 14 18 427 2 406 1.93e-24 105
Msa1435320 AT2G39890.3 23.664 393 281 11 70 455 1 381 2.36e-23 101
Msa1435320 AT3G55740.2 24.873 394 275 12 70 455 1 381 3.62e-22 98.2
Msa1435320 AT3G55740.3 24.873 394 275 12 70 455 1 381 3.62e-22 98.2
Msa1435320 AT5G02180.1 25.472 424 277 16 22 431 137 535 9.24e-21 95.5
Msa1435320 AT5G02180.2 25.472 424 277 16 22 431 137 535 9.24e-21 95.5
Msa1435320 AT5G02170.2 24.709 429 254 13 7 413 80 461 2.19e-18 87.8
Msa1435320 AT5G15240.1 22.222 405 262 11 23 409 14 383 3.15e-18 87.0
Msa1435320 AT5G02170.1 23.409 440 275 13 7 413 80 490 1.45e-17 85.5
Msa1435320 AT2G36590.2 26.235 324 220 13 18 335 2 312 4.57e-16 79.7
Msa1435320 AT3G09340.1 24.552 391 250 15 50 426 139 498 1.19e-15 79.7
Msa1435320 AT3G09330.1 24.552 391 250 15 50 426 139 498 1.74e-15 79.0
Msa1435320 AT5G23810.4 28.205 234 151 6 41 258 24 256 6.67e-15 75.1
Msa1435320 AT2G39130.2 20.479 459 322 13 5 447 116 547 7.16e-14 74.3
Msa1435320 AT2G39130.1 20.479 459 322 13 5 447 116 547 7.16e-14 74.3
Msa1435320 AT3G28960.5 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1435320 AT3G28960.2 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1435320 AT3G28960.3 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1435320 AT3G28960.1 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1435320 AT2G39130.3 20.854 398 272 13 5 386 116 486 2.50e-11 66.2

Find 109 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGATTTCAACTCAATTTC+TGG 0.033736 tig0027684:-53916 Msa1435320:CDS
CTTATTGGTTATTGGATATT+TGG 0.085011 tig0027684:-52509 Msa1435320:CDS
TACTTCCCTGTTGCTCTTAT+TGG 0.101046 tig0027684:-52524 Msa1435320:CDS
ATCTACAAACCAAGAAAATT+TGG 0.155128 tig0027684:-51217 Msa1435320:CDS
GCTTGTCATGGTGGGCTAAT+TGG 0.174066 tig0027684:-51195 Msa1435320:CDS
CTGTTGCTCTTATTGGTTAT+TGG 0.183030 tig0027684:-52517 Msa1435320:CDS
TTTCCATGACTGATTTAAAA+TGG 0.216773 tig0027684:+50963 None:intergenic
TGGTGTTAACATTGTTTATA+TGG 0.261030 tig0027684:-54058 Msa1435320:CDS
TTTGGCAAATATGGCAAGTT+TGG 0.265705 tig0027684:-56587 Msa1435320:exon
TAATGATTGTATCTCCTATT+GGG 0.277076 tig0027684:-51046 Msa1435320:CDS
ATGGTTGGAGCTGGTGTTCT+AGG 0.288555 tig0027684:-54574 Msa1435320:CDS
TTTGTTGTTATTCATGTAAT+TGG 0.291711 tig0027684:-52416 Msa1435320:CDS
CTTGTCATGGTGGGCTAATT+GGG 0.300776 tig0027684:-51194 Msa1435320:intron
TCATGTAATTGGAAGTTATC+AGG 0.303141 tig0027684:-52405 Msa1435320:intron
CAACAACTTGTGGTAGAAAT+TGG 0.304466 tig0027684:-54078 Msa1435320:CDS
CTCAATTTCTGGTGTGTCCT+TGG 0.318685 tig0027684:-53905 Msa1435320:CDS
TAACCATACTTATTCTTTCA+TGG 0.324140 tig0027684:-54233 Msa1435320:CDS
AGCAAATATCATGATGAAAT+AGG 0.324535 tig0027684:+53966 None:intergenic
CATCTAAAAGGAATGCAAAA+TGG 0.332595 tig0027684:-54627 Msa1435320:CDS
TTAATGATTGTATCTCCTAT+TGG 0.332819 tig0027684:-51047 Msa1435320:CDS
GGCTTCCAATTACATCTAAA+AGG 0.342698 tig0027684:-54639 Msa1435320:CDS
CCAGAAATTGAGTTGAAATC+AGG 0.349657 tig0027684:+53916 None:intergenic
ATCACACCATATCATAAGTT+TGG 0.350821 tig0027684:-56664 Msa1435320:five_prime_UTR
AAACAAGACAATGTAGAGTA+TGG 0.353812 tig0027684:-52737 Msa1435320:CDS
CTTACAGGTCTCTGGTGATT+AGG 0.358701 tig0027684:+56529 None:intergenic
TAGCAACCAAACTTATGATA+TGG 0.359096 tig0027684:+56658 None:intergenic
TTGGAAACTGAATCACTAAA+TGG 0.361333 tig0027684:-56568 Msa1435320:CDS
GAAACCAGAGAACAACGTTT+TGG 0.363357 tig0027684:+56622 None:intergenic
CAATGTAGAGTATGGATATA+AGG 0.374317 tig0027684:-52729 Msa1435320:CDS
ACAGCTACTCTACAATTTCA+TGG 0.375999 tig0027684:-52781 Msa1435320:intron
ACTCTATGAGTAAAACTTGT+AGG 0.376549 tig0027684:+50992 None:intergenic
CAGCAGCAGTCATGTCCTTC+AGG 0.378746 tig0027684:-53882 Msa1435320:intron
CTCCACATTGGAACTTTGGA+TGG 0.379541 tig0027684:+52584 None:intergenic
TGACTTACAAAGTATGTTGT+TGG 0.382356 tig0027684:+51416 None:intergenic
GATCCATGAAAGAATAAGTA+TGG 0.383511 tig0027684:+54230 None:intergenic
CAATAACCAATAAGAGCAAC+AGG 0.385673 tig0027684:+52518 None:intergenic
TCCTCTCCACATTGGAACTT+TGG 0.386707 tig0027684:+52580 None:intergenic
GGAACTTTGGATGGTTTCTC+AGG 0.388470 tig0027684:+52593 None:intergenic
AACATTGTTTATATGGTCAC+TGG 0.391582 tig0027684:-54051 Msa1435320:CDS
ATTATACACACTTTGGCAAA+TGG 0.392217 tig0027684:-54202 Msa1435320:CDS
CAAACCAAAACGTTGTTCTC+TGG 0.395780 tig0027684:-56626 Msa1435320:five_prime_UTR
GAGATGCATGAAATGGTTCC+AGG 0.408422 tig0027684:-54177 Msa1435320:CDS
CTTTGATAGATATCATGAAC+TGG 0.409915 tig0027684:-54148 Msa1435320:CDS
AATGTATTGTGCAGGGGTCC+AGG 0.434625 tig0027684:-54258 Msa1435320:intron
CCCCATGCCATGGCACAACT+TGG 0.438233 tig0027684:-54547 Msa1435320:CDS
GATGGTTTCTCAGGTGAGGA+TGG 0.440364 tig0027684:+52602 None:intergenic
GAACTGGGTCAGCATGCCTT+TGG 0.440860 tig0027684:-54132 Msa1435320:CDS
CACAATGTCACTGCCATGGT+TGG 0.447015 tig0027684:-54589 Msa1435320:CDS
TGGGCAGCTAGTATAGATAA+AGG 0.447793 tig0027684:-52761 Msa1435320:CDS
TCCAAGTTGTGCCATGGCAT+GGG 0.460454 tig0027684:+54546 None:intergenic
ATATTTGGAAATGAGGTTGA+TGG 0.469006 tig0027684:-52494 Msa1435320:CDS
TTGAACCAAGTAGAATGCTT+CGG 0.469283 tig0027684:-51645 Msa1435320:CDS
GCCATTGCAATAAGCCATGC+AGG 0.475048 tig0027684:+52446 None:intergenic
AAATTAAACTTACAGGTCTC+TGG 0.483340 tig0027684:+56521 None:intergenic
ATGGTTTCTCAGGTGAGGAT+GGG 0.489721 tig0027684:+52603 None:intergenic
ATCCAAGTTGTGCCATGGCA+TGG 0.497867 tig0027684:+54545 None:intergenic
TGGTGATTAGGACTTGAGTT+GGG 0.498331 tig0027684:+56541 None:intergenic
TCATCACATTATACACACTT+TGG 0.498785 tig0027684:-54209 Msa1435320:CDS
TTACAGATATGCATTGTGCT+TGG 0.501439 tig0027684:-51077 Msa1435320:intron
GTCACTGCCATGGTTGGAGC+TGG 0.502635 tig0027684:-54583 Msa1435320:CDS
AAAACTAGGTCTTTATATTG+TGG 0.505522 tig0027684:-54106 Msa1435320:CDS
GTGAGGATGGGATTGTTGCT+TGG 0.508593 tig0027684:+52615 None:intergenic
CTGGTGATTAGGACTTGAGT+TGG 0.510641 tig0027684:+56540 None:intergenic
CAAGAAAATTTGGCTTGTCA+TGG 0.522709 tig0027684:-51207 Msa1435320:CDS
ATAAACCGAAGCATTCTACT+TGG 0.522849 tig0027684:+51640 None:intergenic
ACATTGTTTATATGGTCACT+GGG 0.526459 tig0027684:-54050 Msa1435320:CDS
TTATTGGATATTTGGAAATG+AGG 0.527446 tig0027684:-52501 Msa1435320:CDS
AATGATTGTATCTCCTATTG+GGG 0.528901 tig0027684:-51045 Msa1435320:CDS
TTTGACTTCTTTAATGCACT+TGG 0.531478 tig0027684:-52683 Msa1435320:CDS
GGACATGACTGCTGCTGCCA+AGG 0.537322 tig0027684:+53888 None:intergenic
CAGAAATTGAGTTGAAATCA+GGG 0.541262 tig0027684:+53917 None:intergenic
GAAAATTTGGCTTGTCATGG+TGG 0.542110 tig0027684:-51204 Msa1435320:CDS
ATTGAAAGCCACATGATACA+TGG 0.544147 tig0027684:+51238 None:intergenic
ACCTGCATGGCTTATTGCAA+TGG 0.551738 tig0027684:-52447 Msa1435320:CDS
ATTGTGCGTAATGTATATGT+TGG 0.551850 tig0027684:-51619 Msa1435320:intron
CAGGTTTCTGTAAAGATATG+AGG 0.552651 tig0027684:+52465 None:intergenic
AATGGTTGAGATGCATGAAA+TGG 0.555074 tig0027684:-54184 Msa1435320:CDS
TGTTGTTGCATACATTGTTG+TGG 0.556512 tig0027684:-52555 Msa1435320:CDS
CAGCTACTCTACAATTTCAT+GGG 0.557090 tig0027684:-52780 Msa1435320:CDS
TATAAGGCACATAGTACTGC+AGG 0.557547 tig0027684:-52713 Msa1435320:CDS
TCCAGCTTCCATGTATCATG+TGG 0.565464 tig0027684:-51246 Msa1435320:intron
TTTGGATGGTTTCTCAGGTG+AGG 0.566313 tig0027684:+52598 None:intergenic
CCAAGTTGTGCCATGGCATG+GGG 0.568553 tig0027684:+54547 None:intergenic
AAAATTTGGCTTGTCATGGT+GGG 0.574283 tig0027684:-51203 Msa1435320:CDS
TGCTGGACACAATGTGGTGT+TGG 0.574811 tig0027684:-52642 Msa1435320:CDS
ATGCCATGGCACAACTTGGA+TGG 0.578557 tig0027684:-54543 Msa1435320:intron
ACAACAACTCCTCTCCACAT+TGG 0.578846 tig0027684:+52572 None:intergenic
TGACTGATTTAAAATGGAGA+AGG 0.585907 tig0027684:+50969 None:intergenic
TGACATGATTGAAACTGTGT+TGG 0.590690 tig0027684:-51683 Msa1435320:CDS
AGCTTGGACACACAATATCA+TGG 0.599055 tig0027684:+54007 None:intergenic
ATTTCTACCACAAGTTGTTG+AGG 0.602908 tig0027684:+54081 None:intergenic
AGAATAAGTATGGTTACACC+TGG 0.606953 tig0027684:+54240 None:intergenic
TAGAACACCAGCTCCAACCA+TGG 0.608052 tig0027684:+54576 None:intergenic
CACCACATTGTGTCCAGCAT+AGG 0.619530 tig0027684:+52646 None:intergenic
TGCCTATGCTGGACACAATG+TGG 0.624189 tig0027684:-52648 Msa1435320:CDS
TATCTTTACAGAAACCTGCA+TGG 0.633642 tig0027684:-52460 Msa1435320:CDS
ATACCATCCAAGTTGTGCCA+TGG 0.633650 tig0027684:+54540 None:intergenic
ATTGTTTATATGGTCACTGG+GGG 0.635240 tig0027684:-54048 Msa1435320:CDS
ATGATTGTATCTCCTATTGG+GGG 0.638752 tig0027684:-51044 Msa1435320:CDS
TCCAAAGTTCCAATGTGGAG+AGG 0.647648 tig0027684:-52581 Msa1435320:CDS
CATTGTTTATATGGTCACTG+GGG 0.653395 tig0027684:-54049 Msa1435320:CDS
CTAAAAGGAATGCAAAATGG+TGG 0.654216 tig0027684:-54624 Msa1435320:CDS
AACCATCCAAAGTTCCAATG+TGG 0.666559 tig0027684:-52586 Msa1435320:CDS
TTTGATAGATATCATGAACT+GGG 0.668209 tig0027684:-54147 Msa1435320:CDS
GGGACAAGAGAATTGATGAG+TGG 0.673055 tig0027684:-54660 Msa1435320:CDS
TGTGGTGCCTCAACAACTTG+TGG 0.674045 tig0027684:-54088 Msa1435320:CDS
GTTTCAATCATGTCAAACAC+AGG 0.690079 tig0027684:+51691 None:intergenic
CAAGTTGTGCCATGGCATGG+GGG 0.711955 tig0027684:+54548 None:intergenic
AATAACCAATAAGAGCAACA+GGG 0.740105 tig0027684:+52519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAACTTATTTAGTTT+GGG + tig0027684:51127-51146 None:intergenic 10.0%
!! AAAAAAAAACTTATTTAGTT+TGG + tig0027684:51128-51147 None:intergenic 10.0%
!! TATTATATATATTTCTCATT+TGG + tig0027684:51441-51460 None:intergenic 10.0%
!!! TATTGTTTTGTATTAAAAAT+TGG - tig0027684:51731-51750 Msa1435320:intron 10.0%
!!! ACATTATTTTTTATGTAAAT+AGG - tig0027684:52200-52219 Msa1435320:intron 10.0%
!!! GATTATATTTGTTTTATTAT+TGG + tig0027684:52465-52484 None:intergenic 10.0%
!! TTTAATAACACAAAATTAAT+TGG + tig0027684:52720-52739 None:intergenic 10.0%
!! ATTAAACATATAATATAAGA+CGG + tig0027684:53050-53069 None:intergenic 10.0%
!!! GATAATTTTTTCAATTAAAA+AGG - tig0027684:54018-54037 Msa1435320:CDS 10.0%
!!! TTTTTCAAATATTTTTACTT+TGG - tig0027684:55867-55886 Msa1435320:intron 10.0%
!!! TCTTGTTTTTATTCTTTTTT+TGG - tig0027684:51009-51028 Msa1435320:CDS 15.0%
!!! AAAAAAACTTATTTAGTTTG+GGG + tig0027684:51126-51145 None:intergenic 15.0%
!!! TTTTTTTTTTACCATGTTAT+TGG - tig0027684:51143-51162 Msa1435320:intron 15.0%
!!! TACTAGTTTGTATTAAAATT+TGG - tig0027684:51382-51401 Msa1435320:intron 15.0%
!! AATATATATAATAAGAAGCA+TGG - tig0027684:51448-51467 Msa1435320:CDS 15.0%
!! AGGAAATATTTCAATTTAAA+TGG + tig0027684:51652-51671 None:intergenic 15.0%
!! TTTGATTAAAGTTATATGTA+TGG - tig0027684:52397-52416 Msa1435320:intron 15.0%
!!! TTCTCAAGTTATTAATTTTT+TGG - tig0027684:53611-53630 Msa1435320:intron 15.0%
!!! AAGTTATTAATTTTTTGGAT+CGG - tig0027684:53616-53635 Msa1435320:intron 15.0%
!! TATATGTTATGTTACTAATA+TGG - tig0027684:55369-55388 Msa1435320:intron 15.0%
!! TCAATATAATAAATTTCCTT+CGG - tig0027684:56114-56133 Msa1435320:intron 15.0%
!!! ATGTGTAAAAAAGTTTTATA+CGG + tig0027684:56578-56597 None:intergenic 15.0%
!!! ATGTTAAGTAGATATATTTT+TGG - tig0027684:56618-56637 Msa1435320:five_prime_UTR 15.0%
!!! AAATTTTTATTGCTGCTTAA+TGG - tig0027684:51170-51189 Msa1435320:intron 20.0%
!! AGAAACATAATATAAGATAG+AGG + tig0027684:51672-51691 None:intergenic 20.0%
!!! AGAAATATAATAAGAAGCAT+GGG - tig0027684:51795-51814 Msa1435320:intron 20.0%
!! TCTGTTTAAAGAAAAGTAAA+AGG + tig0027684:51863-51882 None:intergenic 20.0%
!!! TTGACTTTTAAAATGCTTTT+GGG + tig0027684:52015-52034 None:intergenic 20.0%
!!! TTTGACTTTTAAAATGCTTT+TGG + tig0027684:52016-52035 None:intergenic 20.0%
!!! TAGTTTGAGTAATAATTTTG+AGG + tig0027684:52234-52253 None:intergenic 20.0%
!! AAAAAATTCTTGCAAGATTA+AGG + tig0027684:52993-53012 None:intergenic 20.0%
!! TAACACTTAAAAAACTTAGA+TGG + tig0027684:53021-53040 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAGA+AGG - tig0027684:53131-53150 Msa1435320:intron 20.0%
!!! TATGAGTTTACTTTAAAGAA+GGG - tig0027684:53132-53151 Msa1435320:intron 20.0%
!!! AAAGTTTTATATATACCTGA+AGG + tig0027684:53558-53577 None:intergenic 20.0%
!! AAAGATATTATATCAATCAG+TGG - tig0027684:54087-54106 Msa1435320:CDS 20.0%
!! TCAAACTTGATTTCTAAATA+TGG + tig0027684:54478-54497 None:intergenic 20.0%
!!! TTTGAAATACTACTTGAAAT+AGG - tig0027684:54493-54512 Msa1435320:intron 20.0%
!!! TCATTAAATTGTTTTTGTCA+TGG + tig0027684:54553-54572 None:intergenic 20.0%
!! CAACATGTTAATTTAAACTT+TGG - tig0027684:54603-54622 Msa1435320:CDS 20.0%
!!! TTTGTTGTTATTCATGTAAT+TGG - tig0027684:55006-55025 Msa1435320:intron 20.0%
!!! ATTAGTTATCTGAGTTTTTT+TGG - tig0027684:55271-55290 Msa1435320:intron 20.0%
!!! TATTTTTGTAACATAATGTG+TGG + tig0027684:55345-55364 None:intergenic 20.0%
!! ATTGTACTAATAGAAAAATG+TGG + tig0027684:55589-55608 None:intergenic 20.0%
!!! TGATAATTTTAATATTCCGA+AGG + tig0027684:56133-56152 None:intergenic 20.0%
! TTGAGAGAAATTAAACTTAC+AGG + tig0027684:50911-50930 None:intergenic 25.0%
! TAATCTTAAGAGTAATGAGA+TGG + tig0027684:50981-51000 None:intergenic 25.0%
! AAAATTTCGTACCAATAACA+TGG + tig0027684:51157-51176 None:intergenic 25.0%
! TAATGGTGAGTAATCTTTAT+CGG - tig0027684:51187-51206 Msa1435320:intron 25.0%
! TTGTATGGAAAACATGAATA+TGG - tig0027684:51215-51234 Msa1435320:CDS 25.0%
! TGTATGGAAAACATGAATAT+GGG - tig0027684:51216-51235 Msa1435320:CDS 25.0%
! ATAGAGAAAATTCAGTTAGA+GGG + tig0027684:51247-51266 None:intergenic 25.0%
! TGTATGATCACTTATTTAAG+AGG - tig0027684:51268-51287 Msa1435320:intron 25.0%
!!! TGAGGAAGTATTTCATTTTT+CGG + tig0027684:51295-51314 None:intergenic 25.0%
!! TATAATAAGAAGCATGGTAT+TGG - tig0027684:51454-51473 Msa1435320:CDS 25.0%
!! GAAGATTAGTCATCATTAAA+TGG + tig0027684:51496-51515 None:intergenic 25.0%
! ATCTTCAACAAGAAACTTAT+AGG - tig0027684:51510-51529 Msa1435320:intron 25.0%
! GAGAAATATAATAAGAAGCA+TGG - tig0027684:51794-51813 Msa1435320:intron 25.0%
! CAAAATAAGATGCATCATAT+AGG - tig0027684:51827-51846 Msa1435320:intron 25.0%
! ATTATTACGGTAAAGAGATA+AGG - tig0027684:52081-52100 Msa1435320:intron 25.0%
! ATTTCTTTGTATAAGTTGTG+AGG - tig0027684:52172-52191 Msa1435320:intron 25.0%
!! ATTTGAAACTAACATTCAGA+CGG - tig0027684:52291-52310 Msa1435320:intron 25.0%
! TGTTAGCGAAGTAAAAAAAA+TGG + tig0027684:52337-52356 None:intergenic 25.0%
! ATGTATGTATGTATGTATGT+AGG + tig0027684:52570-52589 None:intergenic 25.0%
! TACATACATACATACATATG+AGG - tig0027684:52653-52672 Msa1435320:CDS 25.0%
! AAACATATAATATAAGACGG+AGG + tig0027684:53047-53066 None:intergenic 25.0%
! TAACCATACTTATTCTTTCA+TGG - tig0027684:53189-53208 Msa1435320:intron 25.0%
! TTTGATAGATATCATGAACT+GGG - tig0027684:53275-53294 Msa1435320:intron 25.0%
! AAAACTAGGTCTTTATATTG+TGG - tig0027684:53316-53335 Msa1435320:intron 25.0%
!! TGGTGTTAACATTGTTTATA+TGG - tig0027684:53364-53383 Msa1435320:intron 25.0%
! AGCAAATATCATGATGAAAT+AGG + tig0027684:53459-53478 None:intergenic 25.0%
! AGAAAAATTGGATTTGGATT+AGG + tig0027684:53811-53830 None:intergenic 25.0%
! TCAACTAGAAAAATTGGATT+TGG + tig0027684:53817-53836 None:intergenic 25.0%
! TCTCATTCAACTAGAAAAAT+TGG + tig0027684:53823-53842 None:intergenic 25.0%
! AGAAAAATACTACGAAGAAT+GGG - tig0027684:53840-53859 Msa1435320:intron 25.0%
! AATTGAAAAAATTATCCGCT+CGG + tig0027684:54014-54033 None:intergenic 25.0%
! GATTGATATAATATCTTTGC+TGG + tig0027684:54085-54104 None:intergenic 25.0%
!! CTTATTGGTTATTGGATATT+TGG - tig0027684:54913-54932 Msa1435320:intron 25.0%
! TTATTGGATATTTGGAAATG+AGG - tig0027684:54921-54940 Msa1435320:intron 25.0%
! CTCTTATGCTATTAATCATT+AGG - tig0027684:55053-55072 Msa1435320:intron 25.0%
!!! TTTTTTATCAAGTAGCTTAG+CGG - tig0027684:55109-55128 Msa1435320:intron 25.0%
!!! TTTTTTCAAGGTGAATAAGT+GGG - tig0027684:55143-55162 Msa1435320:intron 25.0%
! TGTTATGTTACTAATATGGT+AGG - tig0027684:55373-55392 Msa1435320:intron 25.0%
! ACAAGTATTAGATTGGAAAA+AGG + tig0027684:55428-55447 None:intergenic 25.0%
! GTGAGACAAAATAAACTTAA+AGG - tig0027684:55450-55469 Msa1435320:intron 25.0%
! AAATGATTGTCTTTGATATG+AGG - tig0027684:55532-55551 Msa1435320:intron 25.0%
!! GTGTTCTTGCATTATTATTT+TGG - tig0027684:55650-55669 Msa1435320:intron 25.0%
! ATCTACAAACCAAGAAAATT+TGG - tig0027684:56205-56224 Msa1435320:intron 25.0%
! TTAATGATTGTATCTCCTAT+TGG - tig0027684:56375-56394 Msa1435320:intron 25.0%
! TAATGATTGTATCTCCTATT+GGG - tig0027684:56376-56395 Msa1435320:intron 25.0%
!! TTTCCATGACTGATTTAAAA+TGG + tig0027684:56462-56481 None:intergenic 25.0%
!! ATTTTAAATCAGTCATGGAA+AGG - tig0027684:56461-56480 Msa1435320:intron 25.0%
ATCACACCATATCATAAGTT+TGG - tig0027684:50758-50777 Msa1435320:three_prime_UTR 30.0%
TAGCAACCAAACTTATGATA+TGG + tig0027684:50767-50786 None:intergenic 30.0%
ATTTGCCAAAAAGTGAACAA+AGG + tig0027684:50825-50844 None:intergenic 30.0%
!!! TGTTCACTTTTTGGCAAATA+TGG - tig0027684:50826-50845 Msa1435320:three_prime_UTR 30.0%
TTGGAAACTGAATCACTAAA+TGG - tig0027684:50854-50873 Msa1435320:three_prime_UTR 30.0%
AAATTAAACTTACAGGTCTC+TGG + tig0027684:50904-50923 None:intergenic 30.0%
TCTTTATCGGAGAAATTGTA+TGG - tig0027684:51200-51219 Msa1435320:CDS 30.0%
TAGAGAAAATTCAGTTAGAG+GGG + tig0027684:51246-51265 None:intergenic 30.0%
CATAGAGAAAATTCAGTTAG+AGG + tig0027684:51248-51267 None:intergenic 30.0%
GAAACACATAATATGAGATG+AGG + tig0027684:51313-51332 None:intergenic 30.0%
! GATTAGTCATCATTAAATGG+TGG + tig0027684:51493-51512 None:intergenic 30.0%
CAACAATGAATTAGTTCAAG+TGG + tig0027684:51618-51637 None:intergenic 30.0%
CACTTGAACTAATTCATTGT+TGG - tig0027684:51616-51635 Msa1435320:intron 30.0%
!! TTAAAATGCTTTTGGGTCAA+TGG + tig0027684:52008-52027 None:intergenic 30.0%
! AACCAACCAAGTTTAACTTT+AGG - tig0027684:52125-52144 Msa1435320:intron 30.0%
ATCCTAAAGTTAAACTTGGT+TGG + tig0027684:52130-52149 None:intergenic 30.0%
CACTATCCTAAAGTTAAACT+TGG + tig0027684:52134-52153 None:intergenic 30.0%
! ATCTTTTACCTTATTGAACG+CGG - tig0027684:52493-52512 Msa1435320:CDS 30.0%
ATGTATGTATGTATGTAGGT+AGG + tig0027684:52638-52657 None:intergenic 30.0%
AGATTGAAGAAAAATCAGAG+AGG - tig0027684:52741-52760 Msa1435320:CDS 30.0%
GATTGAAGAAAAATCAGAGA+GGG - tig0027684:52742-52761 Msa1435320:CDS 30.0%
! GCATTCCTTTTAGATGTAAT+TGG + tig0027684:52791-52810 None:intergenic 30.0%
CATCTAAAAGGAATGCAAAA+TGG - tig0027684:52795-52814 Msa1435320:intron 30.0%
GATCCATGAAAGAATAAGTA+TGG + tig0027684:53195-53214 None:intergenic 30.0%
TCATCACATTATACACACTT+TGG - tig0027684:53213-53232 Msa1435320:intron 30.0%
ATTATACACACTTTGGCAAA+TGG - tig0027684:53220-53239 Msa1435320:intron 30.0%
CTTTGATAGATATCATGAAC+TGG - tig0027684:53274-53293 Msa1435320:intron 30.0%
!!! AAGACCTAGTTTTTTTCCAA+AGG + tig0027684:53309-53328 None:intergenic 30.0%
AACATTGTTTATATGGTCAC+TGG - tig0027684:53371-53390 Msa1435320:intron 30.0%
ACATTGTTTATATGGTCACT+GGG - tig0027684:53372-53391 Msa1435320:intron 30.0%
! AACTTTATCTTTTTGCAGCT+TGG + tig0027684:53434-53453 None:intergenic 30.0%
!! CAGAAATTGAGTTGAAATCA+GGG + tig0027684:53508-53527 None:intergenic 30.0%
GAGAAAAATACTACGAAGAA+TGG - tig0027684:53839-53858 Msa1435320:intron 30.0%
GAAAAATACTACGAAGAATG+GGG - tig0027684:53841-53860 Msa1435320:intron 30.0%
ATTGAAAAAATTATCCGCTC+GGG + tig0027684:54013-54032 None:intergenic 30.0%
!! GATTGATTTTACATTCGAGA+CGG - tig0027684:54266-54285 Msa1435320:intron 30.0%
!! ATTGATTTTACATTCGAGAC+GGG - tig0027684:54267-54286 Msa1435320:intron 30.0%
!!! CATGTACCGTATTTTGAAAT+CGG - tig0027684:54335-54354 Msa1435320:intron 30.0%
!!! ATGTACCGTATTTTGAAATC+GGG - tig0027684:54336-54355 Msa1435320:intron 30.0%
! TTTTCCCCGATTTCAAAATA+CGG + tig0027684:54344-54363 None:intergenic 30.0%
! AAAACCTGTCAATTTAGGTT+TGG - tig0027684:54398-54417 Msa1435320:intron 30.0%
AAACAAGACAATGTAGAGTA+TGG - tig0027684:54685-54704 Msa1435320:intron 30.0%
CAATGTAGAGTATGGATATA+AGG - tig0027684:54693-54712 Msa1435320:intron 30.0%
! TTTGACTTCTTTAATGCACT+TGG - tig0027684:54739-54758 Msa1435320:intron 30.0%
AATAACCAATAAGAGCAACA+GGG + tig0027684:54906-54925 None:intergenic 30.0%
ATATTTGGAAATGAGGTTGA+TGG - tig0027684:54928-54947 Msa1435320:intron 30.0%
TCATGTAATTGGAAGTTATC+AGG - tig0027684:55017-55036 Msa1435320:intron 30.0%
!!! GCTAGAATTCACTTTTTTCA+AGG - tig0027684:55131-55150 Msa1435320:intron 30.0%
!!! CTTTTTTCAAGGTGAATAAG+TGG - tig0027684:55142-55161 Msa1435320:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG - tig0027684:55144-55163 Msa1435320:intron 30.0%
TTGTAACATAATGTGTGGTA+AGG + tig0027684:55340-55359 None:intergenic 30.0%
TAATATGGTAGGTACAAAGT+TGG - tig0027684:55384-55403 Msa1435320:intron 30.0%
CTCACATACAAGTATTAGAT+TGG + tig0027684:55435-55454 None:intergenic 30.0%
ATTGTGCGTAATGTATATGT+TGG - tig0027684:55803-55822 Msa1435320:intron 30.0%
TGGTAAGTAATCTCTATGTA+TGG - tig0027684:55823-55842 Msa1435320:intron 30.0%
GGTAAGTAATCTCTATGTAT+GGG - tig0027684:55824-55843 Msa1435320:intron 30.0%
AACATTGTGAATGCTGAAAA+GGG + tig0027684:55922-55941 None:intergenic 30.0%
!!! ATTACATTCCCTTTTTTCGA+TGG - tig0027684:55949-55968 Msa1435320:intron 30.0%
TGACTTACAAAGTATGTTGT+TGG + tig0027684:56009-56028 None:intergenic 30.0%
TACCAACTGAACTACATTTA+CGG + tig0027684:56053-56072 None:intergenic 30.0%
AATGATTGTATCTCCTATTG+GGG - tig0027684:56377-56396 Msa1435320:intron 30.0%
ACTCTATGAGTAAAACTTGT+AGG + tig0027684:56433-56452 None:intergenic 30.0%
! TGACTGATTTAAAATGGAGA+AGG + tig0027684:56456-56475 None:intergenic 30.0%
! TCTCCATTTTAAATCAGTCA+TGG - tig0027684:56456-56475 Msa1435320:intron 30.0%
!! GGTTTCCTTTGTTCACTTTT+TGG - tig0027684:50817-50836 Msa1435320:three_prime_UTR 35.0%
TTTGGCAAATATGGCAAGTT+TGG - tig0027684:50835-50854 Msa1435320:three_prime_UTR 35.0%
AGAGAAAATTCAGTTAGAGG+GGG + tig0027684:51245-51264 None:intergenic 35.0%
AGAAAATTCGGCTGAAAATG+GGG + tig0027684:51554-51573 None:intergenic 35.0%
GAGAAAATTCGGCTGAAAAT+GGG + tig0027684:51555-51574 None:intergenic 35.0%
TAAGATGCATCATATAGGAC+AGG - tig0027684:51832-51851 Msa1435320:intron 35.0%
GTGTACGAGGAAAAAATGTA+TGG + tig0027684:51915-51934 None:intergenic 35.0%
CAAACTTAACTAACGTTGAG+AGG + tig0027684:51941-51960 None:intergenic 35.0%
! AACTTGGTTGGTTGACATTA+AGG + tig0027684:52118-52137 None:intergenic 35.0%
AAAAATGGACAAACATGCGT+AGG + tig0027684:52322-52341 None:intergenic 35.0%
TAAGAATACCGCGTTCAATA+AGG + tig0027684:52504-52523 None:intergenic 35.0%
AATATCGCGTTCTTAAAAGC+AGG - tig0027684:52544-52563 Msa1435320:CDS 35.0%
AGGTATGTATGTATGTAGGT+AGG + tig0027684:52610-52629 None:intergenic 35.0%
AGGTAGGTATGTATGTATGT+AGG + tig0027684:52594-52613 None:intergenic 35.0%
ATGTATGTATGTAGGTAGGT+AGG + tig0027684:52606-52625 None:intergenic 35.0%
GGCTTCCAATTACATCTAAA+AGG - tig0027684:52783-52802 Msa1435320:intron 35.0%
CTAAAAGGAATGCAAAATGG+TGG - tig0027684:52798-52817 Msa1435320:intron 35.0%
TTTCCCTTAATGTATTGTGC+AGG - tig0027684:53156-53175 Msa1435320:intron 35.0%
TTCCCTTAATGTATTGTGCA+GGG - tig0027684:53157-53176 Msa1435320:intron 35.0%
AGAATAAGTATGGTTACACC+TGG + tig0027684:53185-53204 None:intergenic 35.0%
AATGGTTGAGATGCATGAAA+TGG - tig0027684:53238-53257 Msa1435320:intron 35.0%
!! TATCTATCAAAGCGTTTTCC+TGG + tig0027684:53266-53285 None:intergenic 35.0%
! CATGCCTTTGGAAAAAAACT+AGG - tig0027684:53302-53321 Msa1435320:intron 35.0%
ATTTCTACCACAAGTTGTTG+AGG + tig0027684:53344-53363 None:intergenic 35.0%
CAACAACTTGTGGTAGAAAT+TGG - tig0027684:53344-53363 Msa1435320:intron 35.0%
CATTGTTTATATGGTCACTG+GGG - tig0027684:53373-53392 Msa1435320:intron 35.0%
ATTGTTTATATGGTCACTGG+GGG - tig0027684:53374-53393 Msa1435320:intron 35.0%
!! CCAGAAATTGAGTTGAAATC+AGG + tig0027684:53509-53528 None:intergenic 35.0%
CCTGATTTCAACTCAATTTC+TGG - tig0027684:53506-53525 Msa1435320:intron 35.0%
TTGAAAAAATTATCCGCTCG+GGG + tig0027684:54012-54031 None:intergenic 35.0%
TGCATTAAAACATTGAGCCA+GGG + tig0027684:54058-54077 None:intergenic 35.0%
ATGCATTAAAACATTGAGCC+AGG + tig0027684:54059-54078 None:intergenic 35.0%
ACGGTACATGACATGTAATA+GGG + tig0027684:54325-54344 None:intergenic 35.0%
TACGGTACATGACATGTAAT+AGG + tig0027684:54326-54345 None:intergenic 35.0%
!!! TGTACCGTATTTTGAAATCG+GGG - tig0027684:54337-54356 Msa1435320:intron 35.0%
! CTGTCAATTTAGGTTTGGTT+CGG - tig0027684:54403-54422 Msa1435320:intron 35.0%
GACTTTGTTGCCATGTTTAA+CGG - tig0027684:54445-54464 Msa1435320:intron 35.0%
TGGTATACAACCGTTAAACA+TGG + tig0027684:54458-54477 None:intergenic 35.0%
ACAGCTACTCTACAATTTCA+TGG - tig0027684:54641-54660 Msa1435320:CDS 35.0%
CAGCTACTCTACAATTTCAT+GGG - tig0027684:54642-54661 Msa1435320:CDS 35.0%
TGTTGTTGCATACATTGTTG+TGG - tig0027684:54867-54886 Msa1435320:intron 35.0%
CAATAACCAATAAGAGCAAC+AGG + tig0027684:54907-54926 None:intergenic 35.0%
! CTGTTGCTCTTATTGGTTAT+TGG - tig0027684:54905-54924 Msa1435320:intron 35.0%
CAGGTTTCTGTAAAGATATG+AGG + tig0027684:54960-54979 None:intergenic 35.0%
TATCTTTACAGAAACCTGCA+TGG - tig0027684:54962-54981 Msa1435320:intron 35.0%
!!! GAGTTTTTTTGGCTTCACAT+AGG - tig0027684:55282-55301 Msa1435320:intron 35.0%
ATGCAAGAACACATGTTATG+TGG + tig0027684:55642-55661 None:intergenic 35.0%
TTGAACCAAGTAGAATGCTT+CGG - tig0027684:55777-55796 Msa1435320:intron 35.0%
! ATAAACCGAAGCATTCTACT+TGG + tig0027684:55785-55804 None:intergenic 35.0%
GAACATTGTGAATGCTGAAA+AGG + tig0027684:55923-55942 None:intergenic 35.0%
ACCAACTGAACTACATTTAC+GGG + tig0027684:56052-56071 None:intergenic 35.0%
ATTGAAAGCCACATGATACA+TGG + tig0027684:56187-56206 None:intergenic 35.0%
! CATGACAAGCCAAATTTTCT+TGG + tig0027684:56217-56236 None:intergenic 35.0%
!! CAAGAAAATTTGGCTTGTCA+TGG - tig0027684:56215-56234 Msa1435320:intron 35.0%
!! AAAATTTGGCTTGTCATGGT+GGG - tig0027684:56219-56238 Msa1435320:intron 35.0%
TTACAGATATGCATTGTGCT+TGG - tig0027684:56345-56364 Msa1435320:intron 35.0%
ATGATTGTATCTCCTATTGG+GGG - tig0027684:56378-56397 Msa1435320:intron 35.0%
!!! CAGAGAACAACGTTTTGGTT+TGG + tig0027684:50798-50817 None:intergenic 40.0%
CAAACCAAAACGTTGTTCTC+TGG - tig0027684:50796-50815 Msa1435320:three_prime_UTR 40.0%
! GAAACCAGAGAACAACGTTT+TGG + tig0027684:50803-50822 None:intergenic 40.0%
TGGTGATTAGGACTTGAGTT+GGG + tig0027684:50884-50903 None:intergenic 40.0%
GGAGAAAATTCGGCTGAAAA+TGG + tig0027684:51556-51575 None:intergenic 40.0%
TCACGTGTGTGGAGAAAATT+CGG + tig0027684:51566-51585 None:intergenic 40.0%
AACCTATCAGTGTGTCATGT+AGG - tig0027684:51889-51908 Msa1435320:intron 40.0%
ATGTATGTAGGTAGGTAGGT+AGG + tig0027684:52630-52649 None:intergenic 40.0%
! TTTTCACAATGTCACTGCCA+TGG - tig0027684:52829-52848 Msa1435320:intron 40.0%
GCTCATGCTACAATGCAATT+TGG + tig0027684:52922-52941 None:intergenic 40.0%
TCCCTTAATGTATTGTGCAG+GGG - tig0027684:53158-53177 Msa1435320:intron 40.0%
ACCCCTGCACAATACATTAA+GGG + tig0027684:53162-53181 None:intergenic 40.0%
AGCTTGGACACACAATATCA+TGG + tig0027684:53418-53437 None:intergenic 40.0%
ATCCCTGTTGAGTATGGTTA+GGG + tig0027684:53930-53949 None:intergenic 40.0%
TTTCTCATCCCTGTTGAGTA+TGG + tig0027684:53936-53955 None:intergenic 40.0%
! AATTTTATCCCCATCCCCAA+CGG - tig0027684:53959-53978 Msa1435320:CDS 40.0%
GCATTAAAACATTGAGCCAG+GGG + tig0027684:54057-54076 None:intergenic 40.0%
TCAATCAGTGGCTATGTTGA+TGG - tig0027684:54099-54118 Msa1435320:CDS 40.0%
! TTCGAGACGGGTTTAGATAT+AGG - tig0027684:54279-54298 Msa1435320:intron 40.0%
! GACGGGTTTAGATATAGGTT+CGG - tig0027684:54284-54303 Msa1435320:intron 40.0%
TTTAGATATAGGTTCGGCGT+GGG - tig0027684:54290-54309 Msa1435320:intron 40.0%
ACTAGGTTTGGGTATGTGAT+TGG + tig0027684:54368-54387 None:intergenic 40.0%
ATACCCAAACCTAGTCAAAG+CGG - tig0027684:54373-54392 Msa1435320:intron 40.0%
CGGGAAAAACCTGTCAATTT+AGG - tig0027684:54393-54412 Msa1435320:intron 40.0%
CGAACCAAACCTAAATTGAC+AGG + tig0027684:54405-54424 None:intergenic 40.0%
!! AATTTAGGTTTGGTTCGGAC+AGG - tig0027684:54408-54427 Msa1435320:intron 40.0%
TGGGCAGCTAGTATAGATAA+AGG - tig0027684:54661-54680 Msa1435320:CDS 40.0%
TATAAGGCACATAGTACTGC+AGG - tig0027684:54709-54728 Msa1435320:intron 40.0%
!! ACTATTGCTTTTGCCTATGC+TGG - tig0027684:54763-54782 Msa1435320:intron 40.0%
AACCATCCAAAGTTCCAATG+TGG - tig0027684:54836-54855 Msa1435320:intron 40.0%
TACTTCCCTGTTGCTCTTAT+TGG - tig0027684:54898-54917 Msa1435320:intron 40.0%
! GGACATGCATTGATATATGC+AGG + tig0027684:55193-55212 None:intergenic 40.0%
GTGGAACTTGCATGATTTAG+TGG + tig0027684:55623-55642 None:intergenic 40.0%
CTAGAAGGCCATCGAAAAAA+GGG + tig0027684:55960-55979 None:intergenic 40.0%
!!! GATGGCCTTCTAGGATTTTT+TGG - tig0027684:55967-55986 Msa1435320:intron 40.0%
!!! GCCTTCTAGGATTTTTTGGA+GGG - tig0027684:55971-55990 Msa1435320:intron 40.0%
ACCCTCCAAAAAATCCTAGA+AGG + tig0027684:55975-55994 None:intergenic 40.0%
TCCCGTAAATGTAGTTCAGT+TGG - tig0027684:56048-56067 Msa1435320:intron 40.0%
!! AGTTCAGTTGGTAGCTATCA+AGG - tig0027684:56060-56079 Msa1435320:intron 40.0%
!! GAAAATTTGGCTTGTCATGG+TGG - tig0027684:56218-56237 Msa1435320:intron 40.0%
CTGGTGATTAGGACTTGAGT+TGG + tig0027684:50885-50904 None:intergenic 45.0%
CTTACAGGTCTCTGGTGATT+AGG + tig0027684:50896-50915 None:intergenic 45.0%
TAAGCGAGTTATCACGTGTG+TGG + tig0027684:51577-51596 None:intergenic 45.0%
GGGACAAGAGAATTGATGAG+TGG - tig0027684:52762-52781 Msa1435320:CDS 45.0%
ATACCATCCAAGTTGTGCCA+TGG + tig0027684:52885-52904 None:intergenic 45.0%
GACCCCTGCACAATACATTA+AGG + tig0027684:53163-53182 None:intergenic 45.0%
GAGATGCATGAAATGGTTCC+AGG - tig0027684:53245-53264 Msa1435320:intron 45.0%
!! CTCAATTTCTGGTGTGTCCT+TGG - tig0027684:53517-53536 Msa1435320:intron 45.0%
AGCGATCTTCGTCGCTAATT+TGG - tig0027684:53678-53697 Msa1435320:intron 45.0%
ATCTCTCGACTTAGATCGAG+CGG - tig0027684:53751-53770 Msa1435320:intron 45.0%
AATACTACGAAGAATGGGGC+AGG - tig0027684:53845-53864 Msa1435320:intron 45.0%
ATACTACGAAGAATGGGGCA+GGG - tig0027684:53846-53865 Msa1435320:intron 45.0%
TCCTCATACCCTACTCTCAA+AGG - tig0027684:53893-53912 Msa1435320:CDS 45.0%
TTGAGTATGGTTAGGGGAAG+AGG + tig0027684:53923-53942 None:intergenic 45.0%
TTCCCCTAACCATACTCAAC+AGG - tig0027684:53924-53943 Msa1435320:CDS 45.0%
TCCCCTAACCATACTCAACA+GGG - tig0027684:53925-53944 Msa1435320:CDS 45.0%
TCCCTGTTGAGTATGGTTAG+GGG + tig0027684:53929-53948 None:intergenic 45.0%
CATCCCTGTTGAGTATGGTT+AGG + tig0027684:53931-53950 None:intergenic 45.0%
! ATTTTATCCCCATCCCCAAC+GGG - tig0027684:53960-53979 Msa1435320:CDS 45.0%
AAAATTATCCGCTCGGGGAT+GGG + tig0027684:54007-54026 None:intergenic 45.0%
AAAAATTATCCGCTCGGGGA+TGG + tig0027684:54008-54027 None:intergenic 45.0%
!!! AGGAAGTATTTTTCAGCCCC+TGG - tig0027684:54038-54057 Msa1435320:CDS 45.0%
GTTTAGATATAGGTTCGGCG+TGG - tig0027684:54289-54308 Msa1435320:intron 45.0%
TACCCAAACCTAGTCAAAGC+GGG - tig0027684:54374-54393 Msa1435320:intron 45.0%
TTCCCGCTTTGACTAGGTTT+GGG + tig0027684:54379-54398 None:intergenic 45.0%
TTTCCCGCTTTGACTAGGTT+TGG + tig0027684:54380-54399 None:intergenic 45.0%
! AGGTTTTTCCCGCTTTGACT+AGG + tig0027684:54385-54404 None:intergenic 45.0%
GCAACAAAGTCCATACCAGT+GGG + tig0027684:54436-54455 None:intergenic 45.0%
ATGGTTTCTCAGGTGAGGAT+GGG + tig0027684:54822-54841 None:intergenic 45.0%
TTTGGATGGTTTCTCAGGTG+AGG + tig0027684:54827-54846 None:intergenic 45.0%
GGAACTTTGGATGGTTTCTC+AGG + tig0027684:54832-54851 None:intergenic 45.0%
CTCCACATTGGAACTTTGGA+TGG + tig0027684:54841-54860 None:intergenic 45.0%
TCCAAAGTTCCAATGTGGAG+AGG - tig0027684:54841-54860 Msa1435320:intron 45.0%
TCCTCTCCACATTGGAACTT+TGG + tig0027684:54845-54864 None:intergenic 45.0%
ACAACAACTCCTCTCCACAT+TGG + tig0027684:54853-54872 None:intergenic 45.0%
ACCTGCATGGCTTATTGCAA+TGG - tig0027684:54975-54994 Msa1435320:intron 45.0%
ATTGATATATGCAGGAGCCG+AGG + tig0027684:55185-55204 None:intergenic 45.0%
CACGGGGACATGTTTCTTTA+AGG - tig0027684:55232-55251 Msa1435320:intron 45.0%
CCTAGAAGGCCATCGAAAAA+AGG + tig0027684:55961-55980 None:intergenic 45.0%
!!! CCTTTTTTCGATGGCCTTCT+AGG - tig0027684:55958-55977 Msa1435320:intron 45.0%
!!! GGCCTTCTAGGATTTTTTGG+AGG - tig0027684:55970-55989 Msa1435320:intron 45.0%
TCCAGCTTCCATGTATCATG+TGG - tig0027684:56176-56195 Msa1435320:intron 45.0%
!! CTTGTCATGGTGGGCTAATT+GGG - tig0027684:56228-56247 Msa1435320:intron 45.0%
TATCTCCTATTGGGGGATTG+AGG - tig0027684:56385-56404 Msa1435320:intron 45.0%
ATTGTCCTCAATCCCCCAAT+AGG + tig0027684:56393-56412 None:intergenic 45.0%
!!! AATTTTAGAAATTATTATTA+CGG - tig0027684:52068-52087 Msa1435320:intron 5.0%
!!! TAAGTTTTTATTTATATAAA+AGG - tig0027684:54236-54255 Msa1435320:CDS 5.0%
!!! AAGTTTTTATTTATATAAAA+GGG - tig0027684:54237-54256 Msa1435320:CDS 5.0%
GGCCTACATGACACACTGAT+AGG + tig0027684:51894-51913 None:intergenic 50.0%
CACAATGTCACTGCCATGGT+TGG - tig0027684:52833-52852 Msa1435320:intron 50.0%
TAGAACACCAGCTCCAACCA+TGG + tig0027684:52849-52868 None:intergenic 50.0%
ATGGTTGGAGCTGGTGTTCT+AGG - tig0027684:52848-52867 Msa1435320:intron 50.0%
TCCAAGTTGTGCCATGGCAT+GGG + tig0027684:52879-52898 None:intergenic 50.0%
ATCCAAGTTGTGCCATGGCA+TGG + tig0027684:52880-52899 None:intergenic 50.0%
ATGCCATGGCACAACTTGGA+TGG - tig0027684:52879-52898 Msa1435320:intron 50.0%
AATGTATTGTGCAGGGGTCC+AGG - tig0027684:53164-53183 Msa1435320:intron 50.0%
TGTGGTGCCTCAACAACTTG+TGG - tig0027684:53334-53353 Msa1435320:intron 50.0%
! GCCTTTGAGAGTAGGGTATG+AGG + tig0027684:53897-53916 None:intergenic 50.0%
! GAGGCAAGCCTTTGAGAGTA+GGG + tig0027684:53904-53923 None:intergenic 50.0%
! AGAGGCAAGCCTTTGAGAGT+AGG + tig0027684:53905-53924 None:intergenic 50.0%
AAATTATCCGCTCGGGGATG+GGG + tig0027684:54006-54025 None:intergenic 50.0%
ATGGAGAAGAGAGAGACCGA+GGG - tig0027684:54118-54137 Msa1435320:CDS 50.0%
GGCAACAAAGTCCATACCAG+TGG + tig0027684:54437-54456 None:intergenic 50.0%
TGCCTATGCTGGACACAATG+TGG - tig0027684:54774-54793 Msa1435320:intron 50.0%
CACCACATTGTGTCCAGCAT+AGG + tig0027684:54779-54798 None:intergenic 50.0%
TGCTGGACACAATGTGGTGT+TGG - tig0027684:54780-54799 Msa1435320:intron 50.0%
GTGAGGATGGGATTGTTGCT+TGG + tig0027684:54810-54829 None:intergenic 50.0%
GATGGTTTCTCAGGTGAGGA+TGG + tig0027684:54823-54842 None:intergenic 50.0%
GCCATTGCAATAAGCCATGC+AGG + tig0027684:54979-54998 None:intergenic 50.0%
! AGGTGAATAAGTGGGGTGTC+TGG - tig0027684:55151-55170 Msa1435320:intron 50.0%
! GGTGAATAAGTGGGGTGTCT+GGG - tig0027684:55152-55171 Msa1435320:intron 50.0%
! GTGAATAAGTGGGGTGTCTG+GGG - tig0027684:55153-55172 Msa1435320:intron 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + tig0027684:55214-55233 None:intergenic 50.0%
TGCCAACTGAGCTATGCTCA+CGG - tig0027684:55214-55233 Msa1435320:intron 50.0%
GCCACATGATACATGGAAGC+TGG + tig0027684:56180-56199 None:intergenic 50.0%
!! GCTTGTCATGGTGGGCTAAT+TGG - tig0027684:56227-56246 Msa1435320:intron 50.0%
CGTTGAGAGGCAAGTGTACG+AGG + tig0027684:51928-51947 None:intergenic 55.0%
CAAGTTGTGCCATGGCATGG+GGG + tig0027684:52877-52896 None:intergenic 55.0%
CCAAGTTGTGCCATGGCATG+GGG + tig0027684:52878-52897 None:intergenic 55.0%
GAACTGGGTCAGCATGCCTT+TGG - tig0027684:53290-53309 Msa1435320:intron 55.0%
CAGCAGCAGTCATGTCCTTC+AGG - tig0027684:53540-53559 Msa1435320:intron 55.0%
TACGAAGAATGGGGCAGGGT+AGG - tig0027684:53850-53869 Msa1435320:intron 55.0%
ACGAAGAATGGGGCAGGGTA+GGG - tig0027684:53851-53870 Msa1435320:intron 55.0%
GTAGGGTATGAGGACGTGGA+AGG + tig0027684:53887-53906 None:intergenic 55.0%
GAGAGTAGGGTATGAGGACG+TGG + tig0027684:53891-53910 None:intergenic 55.0%
TTTCCGAACCCGTTGGGGAT+GGG + tig0027684:53971-53990 None:intergenic 55.0%
ATTTCCGAACCCGTTGGGGA+TGG + tig0027684:53972-53991 None:intergenic 55.0%
AGGGATTTCCGAACCCGTTG+GGG + tig0027684:53976-53995 None:intergenic 55.0%
CAGGGATTTCCGAACCCGTT+GGG + tig0027684:53977-53996 None:intergenic 55.0%
GATGGAGAAGAGAGAGACCG+AGG - tig0027684:54117-54136 Msa1435320:CDS 55.0%
CCTTCCACATCTCACACCCT+CGG + tig0027684:54137-54156 None:intergenic 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + tig0027684:55215-55234 None:intergenic 55.0%
GCCAACTGAGCTATGCTCAC+GGG - tig0027684:55215-55234 Msa1435320:intron 55.0%
CCAACTGAGCTATGCTCACG+GGG - tig0027684:55216-55235 Msa1435320:intron 55.0%
GTCACTGCCATGGTTGGAGC+TGG - tig0027684:52839-52858 Msa1435320:intron 60.0%
TCTAGGTCTCCCCCATGCCA+TGG - tig0027684:52865-52884 Msa1435320:intron 60.0%
CCCCATGCCATGGCACAACT+TGG - tig0027684:52875-52894 Msa1435320:intron 60.0%
GGACATGACTGCTGCTGCCA+AGG + tig0027684:53537-53556 None:intergenic 60.0%
AGAATGGGGCAGGGTAGGGA+CGG - tig0027684:53855-53874 Msa1435320:intron 60.0%
! ATCCCCATCCCCAACGGGTT+CGG - tig0027684:53965-53984 Msa1435320:CDS 60.0%
TTCCGAACCCGTTGGGGATG+GGG + tig0027684:53970-53989 None:intergenic 60.0%
GCAGGGATTTCCGAACCCGT+TGG + tig0027684:53978-53997 None:intergenic 60.0%
! GAGACCGAGGGTGTGAGATG+TGG - tig0027684:54130-54149 Msa1435320:CDS 60.0%
! CCGAGGGTGTGAGATGTGGA+AGG - tig0027684:54134-54153 Msa1435320:CDS 60.0%
! TGGTTCGGACAGGTACCCAC+TGG - tig0027684:54418-54437 Msa1435320:intron 60.0%
CGGACAGGTACCCACTGGTA+TGG - tig0027684:54423-54442 Msa1435320:intron 60.0%
! GGTGTCTGGGGTTCGAACCT+CGG - tig0027684:55165-55184 Msa1435320:intron 60.0%
CCCCGTGAGCATAGCTCAGT+TGG + tig0027684:55219-55238 None:intergenic 60.0%
GAATGGGGCAGGGTAGGGAC+GGG - tig0027684:53856-53875 Msa1435320:intron 65.0%
ATCCGCTCGGGGATGGGGAT+GGG + tig0027684:54001-54020 None:intergenic 65.0%
TATCCGCTCGGGGATGGGGA+TGG + tig0027684:54002-54021 None:intergenic 65.0%
TCGGGGATGGGGATGGGGCA+GGG + tig0027684:53995-54014 None:intergenic 70.0%
TCCGCTCGGGGATGGGGATG+GGG + tig0027684:54000-54019 None:intergenic 70.0%
CTCGGGGATGGGGATGGGGC+AGG + tig0027684:53996-54015 None:intergenic 75.0%
GCCCCATCCCCATCCCCGAG+CGG - tig0027684:53996-54015 Msa1435320:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0027684 gene 50750 56694 50750 ID=Msa1435320;Name=Msa1435320
tig0027684 mRNA 50750 56694 50750 ID=Msa1435320-mRNA-1;Parent=Msa1435320;Name=Msa1435320-mRNA-1;_AED=0.27;_eAED=0.27;_QI=95|1|1|1|1|1|8|245|455
tig0027684 exon 50750 51093 50750 ID=Msa1435320-mRNA-1:exon:9604;Parent=Msa1435320-mRNA-1
tig0027684 exon 51195 51263 51195 ID=Msa1435320-mRNA-1:exon:9603;Parent=Msa1435320-mRNA-1
tig0027684 exon 51424 51515 51424 ID=Msa1435320-mRNA-1:exon:9602;Parent=Msa1435320-mRNA-1
tig0027684 exon 51620 51725 51620 ID=Msa1435320-mRNA-1:exon:9601;Parent=Msa1435320-mRNA-1
tig0027684 exon 52406 52799 52406 ID=Msa1435320-mRNA-1:exon:9600;Parent=Msa1435320-mRNA-1
tig0027684 exon 53883 54266 53883 ID=Msa1435320-mRNA-1:exon:9599;Parent=Msa1435320-mRNA-1
tig0027684 exon 54544 54701 54544 ID=Msa1435320-mRNA-1:exon:9598;Parent=Msa1435320-mRNA-1
tig0027684 exon 56534 56694 56534 ID=Msa1435320-mRNA-1:exon:9597;Parent=Msa1435320-mRNA-1
tig0027684 five_prime_UTR 56600 56694 56600 ID=Msa1435320-mRNA-1:five_prime_utr;Parent=Msa1435320-mRNA-1
tig0027684 CDS 56534 56599 56534 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 54544 54701 54544 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 53883 54266 53883 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 52406 52799 52406 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 51620 51725 51620 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 51424 51515 51424 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 51195 51263 51195 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 CDS 50995 51093 50995 ID=Msa1435320-mRNA-1:cds;Parent=Msa1435320-mRNA-1
tig0027684 three_prime_UTR 50750 50994 50750 ID=Msa1435320-mRNA-1:three_prime_utr;Parent=Msa1435320-mRNA-1
Gene Sequence

>Msa1435320

ATGGCAAGTTTGGAAACTGAATCACTAAATGGTCATCCCAACTCAAGTCCTAATCACCAGAGACCTATTGAAGAAAAATCAGAGAGGGACAAGAGAATTGATGAGTGGCTTCCAATTACATCTAAAAGGAATGCAAAATGGTGGTACTCAGCTTTTCACAATGTCACTGCCATGGTTGGAGCTGGTGTTCTAGGTCTCCCCCATGCCATGGCACAACTTGGATGGGGTCCAGGTGTAACCATACTTATTCTTTCATGGATCATCACATTATACACACTTTGGCAAATGGTTGAGATGCATGAAATGGTTCCAGGAAAACGCTTTGATAGATATCATGAACTGGGTCAGCATGCCTTTGGAAAAAAACTAGGTCTTTATATTGTGGTGCCTCAACAACTTGTGGTAGAAATTGGTGTTAACATTGTTTATATGGTCACTGGGGGAACATCATTGCAAAAGTTCCATGATATTGTGTGTCCAAGCTGCAAAAAGATAAAGTTAACCTATTTCATCATGATATTTGCTTCAGTTCACTTTGTGTTATCTCATCTCCCTGATTTCAACTCAATTTCTGGTGTGTCCTTGGCAGCAGCAGTCATGTCCTTCAGCTACTCTACAATTTCATGGGCAGCTAGTATAGATAAAGGAAAACAAGACAATGTAGAGTATGGATATAAGGCACATAGTACTGCAGGAACAGTCTTTGACTTCTTTAATGCACTTGGCACTATTGCTTTTGCCTATGCTGGACACAATGTGGTGTTGGAGATCCAAGCAACAATCCCATCCTCACCTGAGAAACCATCCAAAGTTCCAATGTGGAGAGGAGTTGTTGTTGCATACATTGTTGTGGCTTTATGCTACTTCCCTGTTGCTCTTATTGGTTATTGGATATTTGGAAATGAGGTTGATGGTGACATCCTCATATCTTTACAGAAACCTGCATGGCTTATTGCAATGGCTAACATGTTTGTTGTTATTCATGTAATTGGAAGTTATCAGATTTATGCAATGCCTGTGTTTGACATGATTGAAACTGTGTTGGTGAAGAAAATGAATTTTGAACCAAGTAGAATGCTTCGGTTTATTGTGCGTAATGTATATGTTGCATTCACAATGTTCATTGCTATTACATTCCCTTTTTTCGATGGCCTTCTAGGATTTTTTGGAGGGTTCGCTTTTGCTCCAACAACATACTTTCTTCCATGTATCATGTGGCTTTCAATCTACAAACCAAGAAAATTTGGCTTGTCATGGTGGGCTAATTGGATATGCATTGTGCTTGGCATATGTTTAATGATTGTATCTCCTATTGGGGGATTGAGGACAATCATAATTAAAGCTAAGACCTACAAGTTTTACTCATAG
Protein sequence

>Msa1435320

MASLETESLNGHPNSSPNHQRPIEEKSERDKRIDEWLPITSKRNAKWWYSAFHNVTAMVGAGVLGLPHAMAQLGWGPGVTILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGKKLGLYIVVPQQLVVEIGVNIVYMVTGGTSLQKFHDIVCPSCKKIKLTYFIMIFASVHFVLSHLPDFNSISGVSLAAAVMSFSYSTISWAASIDKGKQDNVEYGYKAHSTAGTVFDFFNALGTIAFAYAGHNVVLEIQATIPSSPEKPSKVPMWRGVVVAYIVVALCYFPVALIGYWIFGNEVDGDILISLQKPAWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVLVKKMNFEPSRMLRFIVRNVYVAFTMFIAITFPFFDGLLGFFGGFAFAPTTYFLPCIMWLSIYKPRKFGLSWWANWICIVLGICLMIVSPIGGLRTIIIKAKTYKFYS*